RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000050820

Ensembl transcript IDs: ENST00000162330.10, ENST00000393420.10, ENST00000393422.6, ENST00000418647.7, ENST00000535626.6, ENST00000538440.6, ENST00000542031.6, ENST00000546196.2, ENST00000561970.1, ENST00000562556.5, ENST00000563038.5, ENST00000563323.1, ENST00000563700.1, ENST00000564028.1, ENST00000564170.1, ENST00000566982.1, ENST00000567215.1, ENST00000569006.1, ENST00000569340.1, ENST00000642560.1, ENST00000642792.1, ENST00000642821.1, ENST00000643425.1, ENST00000643475.1, ENST00000643488.1, ENST00000643557.1, ENST00000644018.1, ENST00000644039.1, ENST00000644080.1, ENST00000644430.1, ENST00000644785.1, ENST00000645048.1, ENST00000645595.1, ENST00000646149.2, ENST00000646430.1, ENST00000646604.1, ENST00000647035.1, ENST00000647160.1

Found 1968 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCTCGGCCGGCGGGGAGTCTGGAGGGGGCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAAGGGCTTGGCCTTGGCGAAGGCGGG +
Preference number: 1 (lower is better)
Translates to: VLGRRGVWRGRSQYQ*GAGRVKGLGLGEGG
Trigger: CCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCCGAGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CCGGCCCTGCCACCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCGACAGGCGCTTGCCCTCTGCCGGGG +
Preference number: 1 (lower is better)
Translates to: PALPPPRRTQTGCCV*CRCWRPTGACPLPG
Trigger: CCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGGTGGCAGGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp CGCCAGCTCCCAGTCGCACCGGCGCTGCCTGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RQLPVAPALPARSRR*ATVALTPCCSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTGGGAGCTGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGAGGAG +
Preference number: 1 (lower is better)
Translates to: TPAPSGDPTRARGAC*GRPLAGPWASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR GCA 90 bp GCCCTGCCACCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACAGGCGCTTGCCCTCTGCCGGGGCTT +
Preference number: 1 (lower is better)
Translates to: ALPPPRRTQTGCCVC*RCWRPTGACPLPGL
Trigger: AAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGGTGGCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CCACCTCAGGAGGAAGCACCCGTTCACGGGGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCAAGCCAGGGGGCACGTCGTAGAGGT +
Preference number: 1 (lower is better)
Translates to: PPQEEAPVHGAHRTG*PGQAAASQGARRRG
Trigger: ACCTCTACGACGTGCCCCCTGGCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGCTTCCTCCTGAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp GCTGCGTGTGCTGCCGGTGCTGGAGGCCGACAGGCGCTTGCCCTCTaGCGGGGCTTCACGTTCAGCTGGGGGAGGCACCGCATACACACC +
Preference number: 1 (lower is better)
Translates to: AACAAGAGGRQALAL*RGFTFSWGRHRIHT
Trigger: GGTGTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp ACTGGCTGCTGCGTGTGCTGCCGGTGCTGGAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCACGTTCAGCTGGGGGAGGCACCGCAT +
Preference number: 1 (lower is better)
Translates to: TGCCVCCRCWRPTGA*PLPGLHVQLGEAPH
Trigger: ATGCGGTGCCTCCCCCAGCTGAACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCT +
Preference number: 1 (lower is better)
Translates to: PVAQRGYASSQSHRR*LPGPEGGQRWRSHP
Trigger: AGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp CAGTCGCACCGGCGCTGCCTGCCAGGTCCAGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAA +
Preference number: 1 (lower is better)
Translates to: QSHRRCLPGPEGGQR*RSHPAAAVPGPPQQ
Trigger: TTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CCACCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCTTGCCCTCTGCCGGGGCTTCACGTT +
Preference number: 1 (lower is better)
Translates to: PPPRRTQTGCCVCCR*WRPTGACPLPGLHV
Trigger: AACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp CCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGCCCTCTGCCGGGGCTTCACGTTCAG +
Preference number: 1 (lower is better)
Translates to: PPRRTQTGCCVCCRC*RPTGACPLPGLHVQ
Trigger: CTGAACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CTGCCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCCTCCACAGCAACTTCCAGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: LPARSRRWATVALTP*CSRARASTATSSSR
Trigger: CCTGGAGCTGGAAGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp GGGGCAGTGGCCTTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGCTTGGCGTCCTCGGGCACAGCCCGC +
Preference number: 1 (lower is better)
Translates to: GAVALVRLKSSEALP*RKEASCLASSGTAR
Trigger: GCGGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp GGAGGCCGACAGGCGCTTGCCCTCTGCCGGGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACACACCACTGTCGACCACGCCACCATC +
Preference number: 1 (lower is better)
Translates to: GGRQALALCRGFTFS*GRHRIHTTVDHATI
Trigger: GATGGTGGCGTGGTCGACAGTGGTGTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp GGGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGT +
Preference number: 1 (lower is better)
Translates to: GPRKAMGTARQRPWW*PRCRAGGRTAGCCS
Trigger: ACTACAGCAACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGGCCTGCCGTGACAGTGTGTCCCCGA +
Preference number: 1 (lower is better)
Translates to: RAGGRTAGCCSGSPG*ARQQPWPAVTVCPR
Trigger: TCGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CCTTGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGCTGCGCACGTCAGCAGCCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: PWWWPRCRAGGRTAG*CSGSPGCARQQPWP
Trigger: AGGCCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp GGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTCCAGATGCCAGCTGTGGGCATGGGC +
Preference number: 1 (lower is better)
Translates to: GALGSQEPVPLCSCS*PNLPSLQMPAVGMG
Trigger: GCCCATGCCCACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 90 bp CCGGCCCCTGGGCTTCGGCTCCTGAGGAGGCATGGCCCCACACCCTaGCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACC +
Preference number: 1 (lower is better)
Translates to: PAPGLRLLRRHGPTP*PAINIYRFLGIQGT
Trigger: GGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAGGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR GCA 90 bp AAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCT +
Preference number: 1 (lower is better)
Translates to: KAMGTARQRPWWWPR*RAGGRTAGCCSGSP
Trigger: AGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp CAGGCCTCACCCCGCCTCCAGGAGACACCCAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGA +
Preference number: 1 (lower is better)
Translates to: QASPRLQETPSLGVP*FSSRETHSSSALPG
Trigger: TCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCTGGGTGTCTCCTGGAGGCGGGGTGAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 90 bp CCCTCACTCCAGATGCCAGCTGTGGGCATGGGCAGGTGCTCACTGTaGCAGCTCCCTAGGGTTGCAGGGGCCATGCCCAGGCTGTGCTTT +
Preference number: 1 (lower is better)
Translates to: PSLQMPAVGMGRCSL*QLPRVAGAMPRLCF
Trigger: AAAGCACAGCCTGGGCATGGCCCCTGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCATCTGGAGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 90 bp GTTCCTGCCCCAATCTGCCCTCACTCCAGATGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGCAGCTCCCTAGGGTTGCAGGGGCCA +
Preference number: 1 (lower is better)
Translates to: VPAPICPHSRCQLWA*AGAHCGSSLGLQGP
Trigger: TGGCCCCTGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 90 bp TGCAGCTGCCGGCTAAGCTTGGCATGCAGGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCG +
Preference number: 1 (lower is better)
Translates to: CSCRLSLACRARSDV*AALPTALRANSNSS
Trigger: CGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCGGCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp TGGTGCACGTCCTCCATCTTCTGCAGCTGCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTGTGGGCAGCATTGCCCACCGCGCTG +
Preference number: 1 (lower is better)
Translates to: WCTSSIFCSCRLSLA*RARSDVWAALPTAL
Trigger: CAGCGCGGTGGGCAATGCTGCCCACACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGAGGACGTGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp GCAGCTGTTCCTGCCCCAATCTGCCCTCACTCCAGATGCCAGCTGTaGGCATGGGCAGGTGCTCACTGTGGCAGCTCCCTAGGGTTGCAG +
Preference number: 1 (lower is better)
Translates to: AAVPAPICPHSRCQL*AWAGAHCGSSLGLQ
Trigger: CTGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAACAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 90 bp TCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCTCACTCCAGATaGCAGCTGTGGGCATGGGCAGGTGCTCACTGTGGCAGCTCCCTA +
Preference number: 1 (lower is better)
Translates to: SPCAAVPAPICPHSR*QLWAWAGAHCGSSL
Trigger: TAGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 90 bp GGGCCAGGGGTTGGGCTGGCGTCCAGTTGGCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTTCCAGTCGTTCAAACTGCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: GPGVGLASSWPGRGL*AVTPPVPVVQTASA
Trigger: AGCTGAAGCAGTTTGAACGACTGGAACAGGAGGTGTCACGGCCCATAGACCACGACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp GAGAGGGTAGGAGATGACTCAGAGCCCGTGATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGC +
Preference number: 1 (lower is better)
Translates to: ERVGDDSEPVMVWPG*RSPRQCLSVQVLPS
Trigger: GCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACCATCACGGGCTCTGAGTCATCTCCTACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 90 bp CATCGTAGGTCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACTGCGTGGTGGTTGGACG +
Preference number: 1 (lower is better)
Translates to: HRRSPHAAVGHRAHP*SPMEERRRLRGGWT
Trigger: CGTCCAACCACCACGCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGACCTACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 90 bp GGGTTGGGCTGGCGTCCAGTTGGCCAGGTCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCGTTCAAACTGCTTCAGCTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: GLGWRPVGQVVVYGP*HLLFQSFKLLQLLQ
Trigger: TTGCAGCAGCTGAAGCAGTTTGAACGACTGGAACAGGAGGTGTCACGGCCCATAGACCACGACCTGGCCAACTGGACGCCAGCCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGG +
Preference number: 1 (lower is better)
Translates to: YTDSWASRAPGPTQS*GPVPKPVAQRLLTW
Trigger: CCATGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CCA 90 bp TGGGTGTGCTTAAAACCCAGACGTGTCCCTGAGCAGTCGCCACTCTaGGTTCCAAGGGCAGGGCTTGAGCAGGCAGCTCAGTCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: WVCLKPRRVPEQSPL*VPRAGLEQAAQSGS
Trigger: GCTTCCAGACTGAGCTGCCTGCTCAAGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGTTTTAAGCACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 90 bp ACTGCTTCAGCTGCTGCAACTCCAGCTGGCTCTTGCCCTGCCGCGTaGTGCTGCCCTTTTCCAGCAGCTCCTTCTGGGTCTTCTCAAACT +
Preference number: 1 (lower is better)
Translates to: TASAAATPAGSCPAA*CCPFPAAPSGSSQT
Trigger: AGTTTGAGAAGACCCAGAAGGAGCTGCTGGAAAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 90 bp GTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGCCCAAATGGATaGGTGTGCTTAAAACCCAGACGTGTCCCTGAGCAGTCGCCACTC +
Preference number: 1 (lower is better)
Translates to: VPAASAHLGKDCPNG*VCLKPRRVPEQSPL
Trigger: GAGTGGCGACTGCTCAGGGACACGTCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 90 bp CCAGGTATAATTCCATGTGCACTTCGGGAGTTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGCTCTGGATGCAGCCCCCAGCGGTGC +
Preference number: 1 (lower is better)
Translates to: PGIIPCALREFRRLG*DSFKQSSGCSPQRC
Trigger: GCACCGCTGGGGGCTGCATCCAGAGCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCCGAAGTGCACATGGAATTATACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 90 bp GCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCCAAAGAAGGCTaGCCAAAGTCCTGTAAGGCAAGGGGTCAGGGTGCCATCCCAGAC +
Preference number: 1 (lower is better)
Translates to: AVPLLLQMRHSAKEG*PKSCKARGQGAIPD
Trigger: GTCTGGGATGGCACCCTGACCCCTTGCCTTACAGGACTTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGTAACAAGAGAGGAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 90 bp GCTGCGTCAGCCCATCTAGGAAAAGACTGCCCAAATGGATGGGTGTaGTTAAAACCCAGACGTGTCCCTGAGCAGTCGCCACTCTGGGTT +
Preference number: 1 (lower is better)
Translates to: AASAHLGKDCPNGWV*LKPRRVPEQSPLWV
Trigger: AACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTaGCCAAATGGATGGGTGTGCTTAAAACCCAGACGTGTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: LWAKVPAASAHLGKD*PNGWVCLKPRRVPE
Trigger: CTCAGGGACACGTCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 90 bp TCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATaGGGCACAGTGCCAAAGAAGGCTGCCCAAAGTCCTGTAAGGCAA +
Preference number: 1 (lower is better)
Translates to: SVQVLPSPLFLSCYR*GTVPKKAAQSPVRQ
Trigger: TTGCCTTACAGGACTTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 90 bp TGCTGTCACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTaGGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAA +
Preference number: 1 (lower is better)
Translates to: CCHGDNLCRGKIRRA*ESPSPTPFFIQMGK
Trigger: TTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 90 bp CAAAGTCCTGTAAGGCAAGGGGTCAGGGTGCCATCCCAGACTCCATaGCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAA +
Preference number: 1 (lower is better)
Translates to: QSPVRQGVRVPSQTP*PELGSDCGQPNQIK
Trigger: TTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCCTTACAGGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 90 bp CCCCTTCTGAAGCATCTTATAATTTCTGTGGGCCAAAGTGCCTGCTaGGTCAGCCCATCTAGGAAAAGACTGCCCAAATGGATGGGTGTG +
Preference number: 1 (lower is better)
Translates to: PLLKHLIISVGQSAC*VSPSRKRLPKWMGV
Trigger: CACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTATAAGATGCTTCAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 90 bp GCAGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATaGAAGCAATTTTCCGAACACTTCAAGACTGTTCCAAAAATGAAT +
Preference number: 1 (lower is better)
Translates to: AGSSVWKPPQGLLST*KQFSEHFKTVPKMN
Trigger: ATTCATTTTTGGAACAGTCTTGAAGTGTTCGGAAAATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 90 bp CATCCCCTTCTGAAGCATCTTATAATTTCTGTGGGCCAAAGTGCCTaGTGCGTCAGCCCATCTAGGAAAAGACTGCCCAAATGGATGGGT +
Preference number: 1 (lower is better)
Translates to: HPLLKHLIISVGQSA*CVSPSRKRLPKWMG
Trigger: ACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTATAAGATGCTTCAGAAGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: PAPSGDPTRARGACWGRPAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CAA 90 bp GACTGGCTGCTGCGTGTGCTGCCGGTGCTGGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCACGTTCAGCTGGGGGAGGCACCGCA +
Preference number: 2 (lower is better)
Translates to: DWLLRVLPVLEADRR*PSAGASRSAGGGTA
Trigger: TGCGGTGCCTCCCCCAGCTGAACGTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: TPAPSGDPTRARGACWGRLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 2 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: PARSRRWATVALTPCCSRPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...ACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTTGGCGTCCTCGGGCAGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: AVRHCRAGRRPAAWRPRAAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...TGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAACTCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: ATVALTPCCSRARASTATPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...AGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CAA 90 bp CTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCC +
Preference number: 2 (lower is better)
Translates to: LKSSEALPCRKEASC*ASSGTAREQATSRS
Trigger: GGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: ARGACWGRPLAGPWASAPWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: QGPRRESHGDLPASHVGGRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: PGCLPQNRHPPRAALICHNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 2 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 2 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 2 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: ARGACWGRPLAGPWASAPQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: PAPSGDPTRARGACWGRPGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 2 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CAA 90 bp GGCCCCGGGGCAGTGGCCTTGGTCCGTCTGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCCAGCTGCTTGGCGTCCTCGGGCACA +
Preference number: 2 (lower is better)
Translates to: GPGAVALVRLKSSEA*PCRKEASCLASSGT
Trigger: TGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 2 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGC +
Preference number: 2 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLMVWPG*RSPRQC
Trigger: GCACTGTCGTGGGGACCTGCAGCCTGGCCACACCAT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGTTCTGTGGGCCAAAGTaGCTGCTGCGTCAGCCCATC +
Preference number: 2 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGFCGPK*LLRQPI
Trigger: GATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAA...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PAPSGDPTRARGACWGRPQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: SGDPTRARGACWGRPLAGQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 2 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 2 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 2 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTTGGCGTCCTCGGGCAGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 2 (lower is better)
Translates to: AVRHCRAGRRPAAWRPRAVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...TGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PGCLPQNRHPPRAALICHWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR TCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 2 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 2 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTGTGGGCCAAAGTGCCTaGTGCGTCAGCCCATCTAGG +
Preference number: 2 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLVGQSA*CVSPSR
Trigger: CCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCAC...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: PRRESHGDLPASHVGGRWEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR CCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 2 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 2 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CAA 90 bp GACGTGTCCCTGAGCAGTCGCCACTCTGGGTTCCAAGGGCAGGGCTaGAGCAGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: DVSLSSRHSGFQGQG*SRQLSLEASAGPPQ
Trigger: CTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCTGCTCAAGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTCAGGGACACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEALGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 2 (lower is better)
Translates to: AQGPRRESHGDLPASHVGGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 2 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: PWFSSRETHSSSALPGDAAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 2 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCATGACTCAGAGCCCGTaGTGGTGTGGCCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: QGPRRESHGDLPASHVGGMTQSP*WCGQAA
Trigger: TGCAGCCTGGCCACACCATCACGGGCTCTGAGTCAT...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR TCA 90 bp GTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAACTTCCAGCGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 2 (lower is better)
Translates to: VALTPCCSRARASTATSSGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...GCTGGAAGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 2 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR GCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 2 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 2 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: RARGACWGRPLAGPWASAIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAACCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCTGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGC +
Preference number: 2 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPCQLWA*AGAHCG
Trigger: GCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCA...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGGAGTTCCGCAGGCTaGGATGAGATTCTTTTAAGC +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGSSAG*DEILLS
Trigger: GCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 2 (lower is better)
Translates to: QGPRRESHGDLPASHVGGGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR TCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 2 (lower is better)
Translates to: PRRESHGDLPASHVGGRWGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 2 (lower is better)
Translates to: GVARLQVPTTVPICPSPTGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR GCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGCCAAATGGATGGGTGTaGTTAAAACCCAGACGTGTC +
Preference number: 2 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGPNGWV*LKPRRV
Trigger: GACACGTCTGGGTTTTAAGCACACCCATCCATTTGG...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 2 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAGACTGTTCCAAAAATaGATTCTCCTCTTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRLFQK*ILLLAP
Trigger: TGGGGCCAAGAGGAGAATTCATTTTTGGAACAGTCT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGCCAAAGTGCCTGCTaGGTCAGCCCATCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGQSAC*VSPSRK
Trigger: TTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 2 (lower is better)
Translates to: VPWFSSRETHSSSALPGDARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGGCAGGTGCTCACTGTaGCAGCTCCCTAGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIGRCSL*QLPRVA
Trigger: TGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGGGGCCAGGCCCTGCTaGCTTCTTATCATACATGCC +
Preference number: 2 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCGARPC*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGCAGGGCCTGGCCCC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCATGACTCAGAGCCCGTaGTGGTGTGGCCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LVRLKSSEALPCRKEASCMTQSP*WCGQAA
Trigger: TGCAGCCTGGCCACACCATCACGGGCTCTGAGTCAT...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 2 (lower is better)
Translates to: PWFSSRETHSSSALPGDARGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGCCCTTGCCCCCGGGTaGCTTCCCCAGAACCGTCAC +
Preference number: 2 (lower is better)
Translates to: FLGFLLERPTPPLPSREMALAPG*LPQNRH
Trigger: GTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGCCCTTGCCCCCGGGTaGCTTCCCCAGAACCGTCAC +
Preference number: 2 (lower is better)
Translates to: GTTSVEVRSGGLANHPALALAPG*LPQNRH
Trigger: GTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 2 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: TPAPSGDPTRARGACWGRIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGCCAGCAGAATTCTCCTaGGCTGTGACTACAAGGGAG +
Preference number: 2 (lower is better)
Translates to: AQGPRRESHGDLPASHVGPAEFS*AVTTRE
Trigger: CTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGG...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR TCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCTTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 2 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: VPWFSSRETHSSSALPGDNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 2 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 2 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR TCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAACCCAGACGTGTCCCTaGGCAGTCGCCACTCTGGGT +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPTQTCP*AVATLG
Trigger: ACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR GCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCCGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: EGLRITQPYSLLHTDGETRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGAAGGGGGACACACTTaGCCAGGGCAAGGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQEGGHT*PGQGSS
Trigger: AGAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: EGLRITQPYSLLHTDGETWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGTTCCTGCCCCAATCTaGCCTCACTCCAGATGCCAG +
Preference number: 2 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQVPAPI*PHSRCQ
Trigger: CTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 2 (lower is better)
Translates to: EGLRITQPYSLLHTDGETEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCGAAGGGGGACACACTTaGCCAGGGCAAGGGTCTTCT +
Preference number: 2 (lower is better)
Translates to: EGLRITQPYSLLHTDGETEGGHT*PGQGSS
Trigger: AGAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTC...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: IISVGQSACCVSPSRKRLEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTC +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPLCSCS*PNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR TCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCTTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: HGDNLCRGKIRRACESPSFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: PWFSSRETHSSSALPGDAIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGCACGTAGGGGGCAGATaGCAAAGACCTCTGCCCACC +
Preference number: 2 (lower is better)
Translates to: IISVGQSACCVSPSRKRLHVGGR*QRPLPT
Trigger: GGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTG...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: EGLRITQPYSLLHTDGETIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp CCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCT +
Preference number: 3 (lower is better)
Translates to: PSGDPTRARGAC*GRPLAGPWASA
Trigger: AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CCA 72 bp CGGCGGGGAGTCTGGAGGGGGCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAAGGGCTTGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: RRGVWRGRSQYQ*GAGRVKGLGLG
Trigger: GCCAAGGCCAAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGACTCCCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 3 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CAGAGGGGCTACGCCAGCTCCCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGC +
Preference number: 3 (lower is better)
Translates to: QRGYASSQSHRR*LPGPEGGQRWR
Trigger: GCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTGGGAGCTGGCGTAGCCCCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CCCTCCTGGGGTCACCACCCTCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAACTGCTGGGTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: PSWGHHPQAAAS*PRTRRNCWVLW
Trigger: CCACAGCACCCAGCAGTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTGAGGGTGGTGACCCCAGGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp TCCTCTGCCCTCCCGGGAGATGCCACGCATGGCCCTTaGCCCCGGGTGCCTTCCCCAGAACCGTCACCCACC +
Preference number: 3 (lower is better)
Translates to: SSALPGDATHGP*PRVPSPEPSPT
Trigger: GGTGGGTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCAGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 72 bp GCCCTGCCACCTCCAAGGAGGACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGGAGGCCGACAGGCGCT +
Preference number: 3 (lower is better)
Translates to: ALPPPRRTQTGC*VCCRCWRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGGTGGCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CCACTCCTCCTCTGCCCTCCCGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTC +
Preference number: 3 (lower is better)
Translates to: PLLLCPPGRCHA*PLPPGAFPRTV
Trigger: GACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCAGAGGAGGAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp AGGACGCAGACTGGCTGCTGCGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGCCCTCTGCCGGGGCTT +
Preference number: 3 (lower is better)
Translates to: RTQTGCCVCCRC*RPTGACPLPGL
Trigger: AAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CCAGTCGCACCGGCGCTGCCTGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGT +
Preference number: 3 (lower is better)
Translates to: PVAPALPARSRR*ATVALTPCCSR
Trigger: ACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAAACTGCCCCCTTTCTaGGGCCCAGGCTCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLKLPPF*GPGSAL
Trigger: CAGGGCAGAGCCTGGGCCCAAGAAAGGGGGCAGTTT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR-3UTR CAA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATTGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 3 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACAGGCGCTTGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: PPRRTQTGCCVC*RCWRPTGACPL
Trigger: CAGAGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CCACCTCCAAGGAGGACGCAGACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCGACAGGCGCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: PPPRRTQTGCCV*CRCWRPTGACP
Trigger: AGGGCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTTGGAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp GTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCCGCGAGCAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: VRHCRAGRRPAA*RPRAQPASRPP
Trigger: TGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGCGCAGGAGGTCGCACA +
Preference number: 3 (lower is better)
Translates to: PRKAMGTARQRP*WWPRCRAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTaGTCTCATCTGCCACCCTCAGGCAGCTGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RVPSPEPSPTPG*SHLPPSGSCSS
Trigger: GGAAGAGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp CCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGACCGCCGCACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: PVPKPVAQRLLT*EPGSWDRRTPP
Trigger: GGGAGGGGTGCGGCGGTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CCA 72 bp CGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCAGGAGGTCGCACAGCA +
Preference number: 3 (lower is better)
Translates to: RKAMGTARQRPW*WPRCRAGGRTA
Trigger: TGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 3 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 3 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 3 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp AGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCCTCCACAGCAACTTCC +
Preference number: 3 (lower is better)
Translates to: RSRRWATVALTP*CSRARASTATS
Trigger: GGAAGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp TGGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGCTGCGCACGTCAGCAG +
Preference number: 3 (lower is better)
Translates to: WPRCRAGGRTAG*CSGSPGCARQQ
Trigger: CTGCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp TCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTC +
Preference number: 3 (lower is better)
Translates to: SWASRAPGPTQS*GPVPKPVAQRL
Trigger: GAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CCA 72 bp AAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGAGGTCGCACAGCAGGT +
Preference number: 3 (lower is better)
Translates to: KAMGTARQRPWW*PRCRAGGRTAG
Trigger: ACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp AGCTGGCCTAGGACGCGGCGGAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTCTCCACCATGTCCTGG +
Preference number: 3 (lower is better)
Translates to: SWPRTRRNCWVL*PSSLTLSTMSW
Trigger: CCAGGACATGGTGGAGAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCTAGGCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 72 bp CCCCGGGGCAGTGGCCTTGGTCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: PRGSGLGPSEEQ*GIAVQEGGQLL
Trigger: AAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAATCTGCCCTCACTCCAG +
Preference number: 3 (lower is better)
Translates to: SGALGSQEPVPL*SCSCPNLPSLQ
Trigger: CTGGAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 72 bp GGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGGCCTGCCGTGACAGTG +
Preference number: 3 (lower is better)
Translates to: GRTAGCCSGSPG*ARQQPWPAVTV
Trigger: CACTGTCACGGCAGGCCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp GGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACAGCAGGTTGCTGTAGT +
Preference number: 3 (lower is better)
Translates to: GTARQRPWWWPR*RAGGRTAGCCS
Trigger: ACTACAGCAACCTGCTGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CGGCTAAGCTTGGCATGCAGGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCC +
Preference number: 3 (lower is better)
Translates to: RLSLACRARSDV*AALPTALRANS
Trigger: GGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp GCCAGGGGTTGGGCTGGCGTCCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACCTCCTGTTCCAGTCGT +
Preference number: 3 (lower is better)
Translates to: ARGWAGVQLARS*SMGRDTSCSSR
Trigger: ACGACTGGAACAGGAGGTGTCACGGCCCATAGACCACGACCTGGCCAACTGGACGCCAGCCCAACCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 3 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp CCTGCCCCAATCTGCCCTCACTCCAGATGCCAGCTGTaGGCATGGGCAGGTGCTCACTGTGGCAGCTCCCTA +
Preference number: 3 (lower is better)
Translates to: PAPICPHSRCQL*AWAGAHCGSSL
Trigger: TAGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp CCCTCGCTGTTCTCGTACTGCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGTGAGGGCAGGGGTCGT +
Preference number: 3 (lower is better)
Translates to: PSLFSYCPSGES*EVNLGGEGRGR
Trigger: ACGACCCCTGCCCTCACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCCGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR GCA 72 bp GGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTCCAGATGCCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: GSQEPVPLCSCS*PNLPSLQMPAV
Trigger: CACAGCTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp CCCCGCCTCCAGGAGACACCCAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PRLQETPSLGVP*FSSRETHSSSA
Trigger: GGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCTGGGTGTCTCCTGGAGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp CAGCAGTGGGCCATCGGGCACATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGCGTGGTGGTTGGACGG +
Preference number: 3 (lower is better)
Translates to: QQWAIGHILAHR*RNVVDCVVVGR
Trigger: CCGTCCAACCACCACGCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: PWFSSRETHSSSALPGDAVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CAA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCCCCGCTGTTCCTCTCTaGTTACAGATGAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: QGPRRESHGDLPASHVGGPAVPL*LQMRHS
Trigger: ACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGG...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 72 bp GGAGATGACTCAGAGCCCGTGATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGCCTATCTGTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: GDDSEPVMVWPG*RSPRQCLSVQV
Trigger: GACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACCATCACGGGCTCTGAGTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR GCA 72 bp TCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACTGCGTGGT +
Preference number: 3 (lower is better)
Translates to: SPHAAVGHRAHP*SPMEERRRLRG
Trigger: ACCACGCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp TCCTCCATCTTCTGCAGCTGCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTGTGGGCAGCATTGCCC +
Preference number: 3 (lower is better)
Translates to: SSIFCSCRLSLA*RARSDVWAALP
Trigger: GGGCAATGCTGCCCACACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp ACCAGCGTCTGGTGCACGTCCTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGCAGGGCACGGTCAGAT +
Preference number: 3 (lower is better)
Translates to: TSVWCTSSIFCS*RLSLACRARSD
Trigger: ATCTGACCGTGCCCTGCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGAGGACGTGCACCAGACGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp ACGAACTTGCTGTGCGCCACAAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACG +
Preference number: 3 (lower is better)
Translates to: TNLLCATKILGG*LVATAVKKAST
Trigger: CGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCACAGCAAGTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 3 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp GGGCTTCGGCTCCTGAGGAGGCATGGCCCCACACCCTaGCCGGCCATAAATATATACAGATTCCTGGGCATC +
Preference number: 3 (lower is better)
Translates to: GLRLLRRHGPTP*PAINIYRFLGI
Trigger: GATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CCA 72 bp TTAAAACCCAGACGTGTCCCTGAGCAGTCGCCACTCTaGGTTCCAAGGGCAGGGCTTGAGCAGGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: LKPRRVPEQSPL*VPRAGLEQAAQ
Trigger: CTGAGCTGCCTGCTCAAGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGTTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CCA 72 bp GTTGGGCTGGCGTCCAGTTGGCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTTCCAGTCGTTCAAACT +
Preference number: 3 (lower is better)
Translates to: VGLASSWPGRGL*AVTPPVPVVQT
Trigger: AGTTTGAACGACTGGAACAGGAGGTGTCACGGCCCATAGACCACGACCTGGCCAACTGGACGCCAGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR-3UTR CAA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: EGLRITQPYSLLHTDGETVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 72 bp TGGCGTCCAGTTGGCCAGGTCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCGTTCAAACTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: WRPVGQVVVYGP*HLLFQSFKLLQ
Trigger: CTGAAGCAGTTTGAACGACTGGAACAGGAGGTGTCACGGCCCATAGACCACGACCTGGCCAACTGGACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp GTAAGGCAAGGGGTCAGGGTGCCATCCCAGACTCCATaGCCAGAGCTTGGCTCTGACTGTGGACAACCAAAC +
Preference number: 3 (lower is better)
Translates to: VRQGVRVPSQTP*PELGSDCGQPN
Trigger: GTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR CCA 72 bp AGTCGTTCAAACTGCTTCAGCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTGATGCTGCCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: SRSNCFSCCNSS*LLPCRVMLPFS
Trigger: GGAAAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGAACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR TCA 72 bp AAATGGATGGGTGTGCTTAAAACCCAGACGTGTCCCTaGGCAGTCGCCACTCTGGGTTCCAAGGGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: KWMGVLKTQTCP*AVATLGSKGRA
Trigger: AGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGTTTTAAGCACACCCATCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CTCTTGTTACAGATGAGGCACAGTGCCAAAGAAGGCTaGCCAAAGTCCTGTAAGGCAAGGGGTCAGGGTGCC +
Preference number: 3 (lower is better)
Translates to: LLLQMRHSAKEG*PKSCKARGQGA
Trigger: GGCACCCTGACCCCTTGCCTTACAGGACTTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGTAACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
3UTR TCA 72 bp ATTCCATGTGCACTTCGGGAGTTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGCTCTGGATGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: IPCALREFRRLG*DSFKQSSGCSP
Trigger: GGGGCTGCATCCAGAGCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCCGAAGTGCACATGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
3UTR CCA 72 bp GCGTCAGCCCATCTAGGAAAAGACTGCCCAAATGGATaGGTGTGCTTAAAACCCAGACGTGTCCCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: ASAHLGKDCPNG*VCLKPRRVPEQ
Trigger: CTGCTCAGGGACACGTCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp AAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTaGCCAAATGGATGGGTGTGCTTAAAACCCAGACGT +
Preference number: 3 (lower is better)
Translates to: KVPAASAHLGKD*PNGWVCLKPRR
Trigger: ACGTCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp AAGCATCTTATAATTTCTGTGGGCCAAAGTGCCTGCTaGGTCAGCCCATCTAGGAAAAGACTGCCCAAATGG +
Preference number: 3 (lower is better)
Translates to: KHLIISVGQSAC*VSPSRKRLPKW
Trigger: CCATTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTATAAGATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR GCA 72 bp CTGAAGCATCTTATAATTTCTGTGGGCCAAAGTGCCTaGTGCGTCAGCCCATCTAGGAAAAGACTGCCCAAA +
Preference number: 3 (lower is better)
Translates to: LKHLIISVGQSA*CVSPSRKRLPK
Trigger: TTTGGGCAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTATAAGATGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCATGGCCCGGGGGTCTaGCGAAGCCAGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSHGPGV*RSQAAR
Trigger: CCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASARARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCTGCGGGCTGCTGGGTaGGGGAGCCACGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSLRAAG*GSHEGG
Trigger: TCCCCCTTCGTGGCTCCCCCACCCAGCAGCCCGCAG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGTGGGGCCTGCACCTaGGGCCTGGTTACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASACGACT*GLVTRG
Trigger: ACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGCCACGCATGGCCCTTaGCCCCGGGTGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLATHGP*PRVPSP
Trigger: TGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASARRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGACCCACTCCTCCTCTaGCCTCCCGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSDPLLL*PPGRCH
Trigger: GTGGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGTGGGCATGGGCAGGTaGTCACTGTGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGVGMGR*SLWQLP
Trigger: AGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCAC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASALSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCAGCGTCGAGGGCCTaGCCATGTGCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPASRA*PCATSV
Trigger: GACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCCAGCGTCGAGGGCCTaGCCATGTGCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPPASRA*PCATSV
Trigger: GACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASASGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASARGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGCCCTTGCCCCCGGGTaGCTTCCCCAGAACCGTCAC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGALAPG*LPQNRH
Trigger: GTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGTGGGCATGGGCAGGTaGTCACTGTGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSVGMGR*SLWQLP
Trigger: AGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCAC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGCAGCCCCCAGCGGTaGCCTCGGCTCACAGGAACC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCSPQR*PRLTGT
Trigger: GGTTCCTGTGAGCCGAGGGCACCGCTGGGGGCTGCA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASATSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASACCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCAGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCCTGAAGCTTCCATCTaGGCTGCGGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSPEASI*AAGCWV
Trigger: CACCCAGCAGCCCGCAGCCCAGATGGAAGCTTCAGG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
3UTR CAA 72 bp GCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCGCGCAGGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: AAEGDGYCKAAA*VVATMPRRRSH
Trigger: GTGCGACCTCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACCCAGCGTCGAGGGCCTaGCCATGTGCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHPASRA*PCATSV
Trigger: GACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGG...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTACTACCAGGTGTCTGTaGAGGCGGCGGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLTTRCL*RRRLLL
Trigger: GAGGAGCAGCCGCCGCCTTCACAGACACCTGGTAGT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTACTACCAGGTGTCTGTaGAGGCGGCGGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPTTRCL*RRRLLL
Trigger: GAGGAGCAGCCGCCGCCTTCACAGACACCTGGTAGT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAACTGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ATVALTPCCSRARASTATAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...AGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASASEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACTGCCCTCCCGGGAGATaGCACGCATGGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHCPPGR*HAWPLP
Trigger: GGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCA...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCATGCCCTCCCGGGAGATaGCACGCATGGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSCPPGR*HAWPLP
Trigger: GGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCA...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGACCCACTCCTCCTCTaGCCTCCCGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPDPLLL*PPGRCH
Trigger: GTGGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGTGGGCATGGGCAGGTaGTCACTGTGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPVGMGR*SLWQLP
Trigger: AGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCAC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGCCTCACCAGGGCAGTaGATGCCCTCTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAASPGQ*MPSPDT
Trigger: AGTGTCAGGAGAGGGCATGCACTGCCCTGGTGAGGC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCCATGGCCCGGGGGTCTaGCGAAGCCAGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGHGPGV*RSQAAR
Trigger: CCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATG...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: APVHGAHRTGCPGQAAASTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASALLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAACTTCCAGCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VALTPCCSRARASTATSSAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GCTGGAAGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PARSRRWATVALTPCCSRARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...ACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCTGAAGCTTCCATCTaGGCTGCGGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPEASI*AAGCWV
Trigger: CACCCAGCAGCCCGCAGCCCAGATGGAAGCTTCAGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCCTCACCAAGGCAGGTaGGCTGAGCATGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGPHQGR*AEHDVA
Trigger: AGCCACATCATGCTCAGCCCACCTGCCTTGGTGAGG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPQGNDG*RPQLAR
Trigger: CCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGGGTTCCAAGCACCCTaGAGCTTCCATCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPGFQAP*SFHLGC
Trigger: GCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCAACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASARAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASASLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCCACGCATGGCCCTTaGCCCCGGGTGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVATHGP*PRVPSP
Trigger: TGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCTGCAGCCCCCAGCGGTaGCCTCGGCTCACAGGAACC +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPCSPQR*PRLTGT
Trigger: GGTTCCTGTGAGCCGAGGGCACCGCTGGGGGCTGCA...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASACATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASARRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPCQLWA*AGAHCG
Trigger: GCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGCQLWA*AGAHCG
Trigger: GCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTGCGGGCTGCTGGGTaGGGGAGCCACGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSLRAAG*GSHEGG
Trigger: TCCCCCTTCGTGGCTCCCCCACCCAGCAGCCCGCAG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCATGATGTGGCTGAGGTaGGGGGACAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGMMWLR*GDRCCH
Trigger: GTGACAGCATCTGTCCCCCCACCTCAGCCACATCAT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCACCAAGGCAGGTaGGCTGAGCATGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAPHQGR*AEHDVA
Trigger: AGCCACATCATGCTCAGCCCACCTGCCTTGGTGAGG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAAGGCACGGACATCTTaGCCGCCGCCCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVKARTS*PPPPGP
Trigger: AGGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
3UTR CAA 72 bp AGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCCCGCGAGCAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SEALPCRKEASC*ASSGTAREQAT
Trigger: GGTGGCCTGCTCGCGGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGGTTCCAAGCACCCTaGAGCTTCCATCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGFQAP*SFHLGC
Trigger: GCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGGCCAGCACGTTTCTaGGGCAGGGATCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGWPARF*GRDPWV
Trigger: CACCCAAGGATCCCTGCCTCAGAAACGTGCTGGCCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGCCTAGTACCCTCCTaGGTCCTGCTCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGLVPS*VLLQLI
Trigger: GATGAGTTGGAGCAGGACTCAGGAGGGTACTAGGCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR TCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCACCCAGACGTGTCCCTaGGCAGTCGCCACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVTQTCP*AVATLG
Trigger: ACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGT...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTATTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGGGTTGCAGGGGCCATaGCCAGGCTGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHGLQGP*PGCAFW
Trigger: CCAGAAAGCACAGCCTGGGCATGGCCCCTGCAACCC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASALCSCS*PNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSLCSCS*PNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAA...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGCAGCCCCCAGCGGTaGCCTCGGCTCACAGGAACC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCSPQR*PRLTGT
Trigger: GGTTCCTGTGAGCCGAGGGCACCGCTGGGGGCTGCA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGGCCCATGTTCATATaGAGAACGGTCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSRPMFI*RTVRAG
Trigger: CCCAGCCCTGACCGTTCTGCATATGAACATGGGCCT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAGCACGTTCTTCCCCTaGATTGTGCCGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSTFFP*IVPTSG
Trigger: CCCAGATGTCGGCACAATGCAGGGGAAGAACGTGCT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGCACGTTCTTCCCCTaGATTGTGCCGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSSTFFP*IVPTSG
Trigger: CCCAGATGTCGGCACAATGCAGGGGAAGAACGTGCT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAAAGCCCCCACTGCCTaGTTCACGGAAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPKAPTA*FTERMG
Trigger: CCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGGCCAGCACGTTCCTaGTTCCCCTCCCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPWPARS*FPSHPL
Trigger: AAGGGGATGGGAGGGGAAGCAGGAACGTGCTGGCCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCAAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCAGGTGCTCACTGTaGCAGCTCCCTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGRCSL*QLPRVA
Trigger: TGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATGATGTGGCTGAGGTaGGGGGACAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSMMWLR*GDRCCH
Trigger: GTGACAGCATCTGTCCCCCCACCTCAGCCACATCAT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCCTCACCAAGGCAGGTaGGCTGAGCATGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPPHQGR*AEHDVA
Trigger: AGCCACATCATGCTCAGCCCACCTGCCTTGGTGAGG...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGTCATAGAGCGCTTTaGCCAGCACGTTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPCHRAL*PARSAL
Trigger: GAGGGCCGAACGTGCTGGCCAAAGCGCTCTATGACA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418647.7
ENST00000644430.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTCTGCTTCAGCGACATaGGGTAGGAGAGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSASAT*GRRAAR
Trigger: CCTTGCCGCTCTCCTACCCCATGTCGCTGAAGCAGA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCATTGTGCCGACATCTaGGGACTCGGGCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGHCADI*GLGLVL
Trigger: GAGGACCAGCCCGAGTCCCCAGATGTCGGCACAATG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACCAAGTGTGGAAACATaGCCCGGGGGTCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPPSVET*PGGLPK
Trigger: CTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQPAPEA*LPGVAR
Trigger: CCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGG...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGCCTCCACAGCAACTTCCAGCCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VALTPCCSRARASTATSSPAPEA*LPGVAR
Trigger: CCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGG...GCTGGAAGTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQDGVPS*QDAGVS
Trigger: GGACACCCCGGCGTCCTGCCAGGAAGGGACACCATC...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCATGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LVRLKSSEALPCRKEASCSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCTGTGGGGCCTGCACCTaGGGCCTGGTTACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVACGACT*GLVTRG
Trigger: ACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACA...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGGCCTCCTCAGCACATaGAAGCAATTTTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGGLLST*KQFSEH
Trigger: GTGTTCGGAAAATTGCTTTCATGTGCTGAGGAGGCC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTATGCCCTCCCGGGAGATaGCACGCATGGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLCPPGR*HAWPLP
Trigger: GGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCA...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLLCSCS*PNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR GCA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCGAGGTGAGACTGAGATaGTCAGAGATGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: APVHGAHRTGCPGQAAASEVRLR*SEMPVP
Trigger: GGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTC...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGAGGTGAGACTGAGATaGTCAGAGATGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPEVRLR*SEMPVP
Trigger: GGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTTCTGTGGGCCAAAGTaGCTGCTGCGTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGFCGPK*LLRQPI
Trigger: GATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGGGGCCAGGCCCTGCTaGCTTCTTATCATACATGCC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGGARPC*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGCAGGGCCTGGCCCC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASAILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: PARSRRWATVALTPCCSRARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...ACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACTGCGGGCTGCTGGGTaGGGGAGCCACGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTLRAAG*GSHEGG
Trigger: TCCCCCTTCGTGGCTCCCCCACCCAGCAGCCCGCAG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGTCATAGAGCGCTTTaGCCAGCACGTTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPCHRAL*PARSAL
Trigger: GAGGGCCGAACGTGCTGGCCAAAGCGCTCTATGACA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418647.7
ENST00000644430.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTCTGCTTCAGCGACATaGGGTAGGAGAGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGSASAT*GRRAAR
Trigger: CCTTGCCGCTCTCCTACCCCATGTCGCTGAAGCAGA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCCTGCCCCACGCGGGTaGGCACCACCACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPPAPRG*APPPRS
Trigger: AGATCTTGGTGGTGGTGCCCACCCGCGTGGGGCAGG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACCTGCCCCACGCGGGTaGGCACCACCACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRPAPRG*APPPRS
Trigger: AGATCTTGGTGGTGGTGCCCACCCGCGTGGGGCAGG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCCAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSQGNDG*RPQLAR
Trigger: CCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTG...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCACGTAGGGGGCAGATaGCAAAGACCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRHVGGR*QRPLPT
Trigger: GGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCAGGCAGCTCAGTCTaGAAGCCTCCGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSAGSSV*KPPQGL
Trigger: GAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCTGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CAA 72 bp TGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGCTGGGACCGCCGCACC +
Preference number: 4 (lower is better)
Translates to: WGPVPKPVAQRL*TWEPGSWDRRT
Trigger: GGTGCGGCGGTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
3UTR CAA 72 bp CCCAGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTaGTGCAGCTGTTCCTGCCCCAATCTGCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PSGALGSQEPVP*CSCSCPNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACCAGCGTCGAGGGCCTaGCCATGTGCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTPASRA*PCATSV
Trigger: GACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGTGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGGGTTCCAAGCACCCTaGAGCTTCCATCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPGFQAP*SFHLGC
Trigger: GCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEAGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGAGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEACVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: APVHGAHRTGCPGQAAASNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGACCCACTCCTCCTCTaGCCTCCCGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLDPLLL*PPGRCH
Trigger: GTGGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGGTTGCAGGGGCCATaGCCAGGCTGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGLQGP*PGCAFW
Trigger: CCAGAAAGCACAGCCTGGGCATGGCCCCTGCAACCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGTGGGCATGGGCAGGTaGTCACTGTGGCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRVGMGR*SLWQLP
Trigger: AGGGAGCTGCCACAGTGAGCACCTGCCCATGCCCAC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTCTTCCCCTGCATTGTaGCGACATCTGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRSSPAL*RHLGTR
Trigger: CCGAGTCCCCAGATGTCGGCACAATGCAGGGGAAGA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGGCTCAGAGATGCCAGTaGCCAAGTGTGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGAQRCQ*PSVETW
Trigger: CCATGTTTCCACACTTGGGCACTGGCATCTCTGAGC...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTTCCCTAATCACTACTaGCCTGGGATACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPFPNHY*PGIPAL
Trigger: GAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGC +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWMVWPG*RSPRQC
Trigger: GCACTGTCGTGGGGACCTGCAGCCTGGCCACACCAT...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCCCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: LVRLKSSEALPCRKEASCPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEARRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEARQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: RARGACWGRPLAGPWASASLGVP*FSSRET
Trigger: GGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCTGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGCQLWA*AGAHCG
Trigger: GCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCA...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGGGAGTTCCGCAGGCTaGGATGAGATTCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLGSSAG*DEILLS
Trigger: GCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPSSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCACAATGCTTTGCACTTaGCCAGCTTCCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSTMLCT*PASLWS
Trigger: TGACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGCAGGCAGCTCAGTCTaGAAGCCTCCGCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLAGSSV*KPPQGL
Trigger: GAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCTGC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGTGTGGGGCCTGCACCTaGGGCCTGGTTACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRCGACT*GLVTRG
Trigger: ACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACA...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCATGACTCAGAGCCCGTaGTGGTGTGGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFMTQSP*WCGQAA
Trigger: TGCAGCCTGGCCACACCATCACGGGCTCTGAGTCAT...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGATGACTCAGAGCCCGTaGTGGTGTGGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWMTQSP*WCGQAA
Trigger: TGCAGCCTGGCCACACCATCACGGGCTCTGAGTCAT...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCACCCAGACGTGTCCCTaGGCAGTCGCCACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSTQTCP*AVATLG
Trigger: ACCCAGAGTGGCGACTGCTCAGGGACACGTCTGGGT...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGGCTGCTGCGTGTGCTaGCGGTGCTGGAGGCCGACA +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPGCCVC*RCWRPT
Trigger: TGTCGGCCTCCAGCACCGGCAGCACACGCAGCAGCC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGAACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEANPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASINPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGCCCTCCCGGGAGATaGCACGCATGGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPCPPGR*HAWPLP
Trigger: GGGCAAGGGCCATGCGTGGCATCTCCCGGGAGGGCA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCTGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTCPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTTGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPCPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCACAGCTCGCCAGGTaGAGATGGTGTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSPQLAR*RWCPFL
Trigger: CAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAAAGCCCCCACTGCCTaGTTCACGGAAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSKAPTA*FTERMG
Trigger: CCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTT...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GTCTGGAGGGGGCGCAGCCAGTACCAGTGGGGTGCGGGCCGGGTCAAAGGGCTTGGCCAAAGTGCCTGCTaGGTCAGCCCATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VWRGRSQYQWGAGRVKGLGQSAC*VSPSRK
Trigger: TTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCC...AAGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCGCCCCCTCCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTGGCCAGCACGTTCCTaGTTCCCCTCCCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVWPARS*FPSHPL
Trigger: AAGGGGATGGGAGGGGAAGCAGGAACGTGCTGGCCA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGCLPQNRHPPRAALICHVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCCGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGGTCCTGCACCAGCGGCTCCTGTGGCTCAGAGGGGCTACGCCAGCTCCCAGTTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QVLHQRLLWLRGATPAPSCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...ACTGGGAGCTGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTGCAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCAGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCGCGGAAGGCGATGGGTACTGCAAGGCAGCGGCCTTGGTGGTGGCCACGATGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GRGRRWVLQGSGLGGGHDGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...ATCGTGGCCACCACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCTGCCAGGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PARSRRWATVALTPCCSRGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...ACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCATTGTGCCGACATCTaGGGACTCGGGCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPHCADI*GLGLVL
Trigger: GAGGACCAGCCCGAGTCCCCAGATGTCGGCACAATG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSPAPEA*LPGVAR
Trigger: CCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGG...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGTGTCCATCTGTCATGTaGGGCCTGCACCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQCPSVM*GLHLRP
Trigger: AGGCCTCAGGTGCAGGCCCCACATGACAGATGGACA...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGCTTCACGGAAAGGATaGGGTCCTCCGGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWASRKG*GPPGEE
Trigger: CTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGAGCAGTCGCCACTCTaGGTTCCAAGGGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQREQSPL*VPRAGL
Trigger: AAGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CAA 72 bp GCAGTGGCCTTGGTCCGTCTGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCCAGCTGCTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: AVALVRLKSSEA*PCRKEASCLAS
Trigger: GGACGCCAAGCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCACTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTATCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCATTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGCLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR TCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGGCCTAGTACCCTCCTaGGTCCTGCTCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVGLVPS*VLLQLI
Trigger: GATGAGTTGGAGCAGGACTCAGGAGGGTACTAGGCC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR TCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAATGACTCAGAGCCCGTaGTGGTGTGGCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLMTQSP*WCGQAA
Trigger: TGCAGCCTGGCCACACCATCACGGGCTCTGAGTCAT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACTTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGTTCCTGCCCCAATCTaGCCTCACTCCAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPVPAPI*PHSRCQ
Trigger: CTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAGGTATAATTCCATGTaGACTTCGGGAGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPRYNSM*TSGVPQ
Trigger: CTGCGGAACTCCCGAAGTGCACATGGAATTATACCT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCGAAGGGGGACACACTTaGCCAGGGCAAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGEGGHT*PGQGSS
Trigger: AGAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTC...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAGGCCCATGTTCATATaGAGAACGGTCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPRPMFI*RTVRAG
Trigger: CCCAGCCCTGACCGTTCTGCATATGAACATGGGCCT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCATGGCCCGGGGGTCTaGCGAAGCCAGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAHGPGV*RSQAAR
Trigger: CCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATG...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAAAGCCCCCACTGCCTaGTTCACGGAAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGKAPTA*FTERMG
Trigger: CCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTT...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTTCCCTCTGGTCATCTaGACTCACTCTGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPFPLVI*THSGIV
Trigger: AACTATCCCAGAGTGAGTGCAGATGACCAGAGGGAA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTGGCAAGGGGTCAGGGTaGCATCCCAGACTCCATGCC +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCGKGSG*HPRLHA
Trigger: GGCATGGAGTCTGGGATGGCACCCTGACCCCTTGCC...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGC +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCMVWPG*RSPRQC
Trigger: GCACTGTCGTGGGGACCTGCAGCCTGGCCACACCAT...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGC +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTMVWPG*RSPRQC
Trigger: GCACTGTCGTGGGGACCTGCAGCCTGGCCACACCAT...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGGGGCCAGGCCCTGCTaGCTTCTTATCATACATGCC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPGARPC*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGCAGGGCCTGGCCCC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGCCGGCGGGGAGTCTaGAGGGGGCGCAGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPGRRGV*RGRSQY
Trigger: GTACTGGCTGCGCCCCCTCCAGACTCCCCGCCGGCC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGCAGCATTGCCCACCGCGCTGCGGGCAAACTCCAACAGCTCGTGGACGGCACGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQHCPPRCGQTPTARGRHVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...GTGCCGTCCACGAGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTCAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGGCCAGGGGTTGGGCTaGCGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQGQGLG*RPVGQV
Trigger: GACCTGGCCAACTGGACGCCAGCCCAACCCCTGGCC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAACAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGGACCGACGCAGAGCTaGGGTCCTGTCCCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTGPTQS*GPVPKP
Trigger: AGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ARGACWGRPLAGPWASAPIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPSLGVP*FSSRET
Trigger: GGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGGGAGTTCCGCAGGCTaGGATGAGATTCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPGSSAG*DEILLS
Trigger: GCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGDPTRARGACWGRPLAGKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACCAAGTGTGGAAACATaGCCCGGGGGTCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLPSVET*PGGLPK
Trigger: CTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCCCAAGTGTGGAAACATaGCCCGGGGGTCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVAPSVET*PGGLPK
Trigger: CTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGG...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPASAQV*KHGPGV
Trigger: GACCCCCGGGCCATGTTTCCACACTTGGGCACTGGC...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LVRLKSSEALPCRKEASCPAPEA*LPGVAR
Trigger: CCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGG...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGTGTCCATCTGTCATGTaGGGCCTGCACCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGCPSVM*GLHLRP
Trigger: AGGCCTCAGGTGCAGGCCCCACATGACAGATGGACA...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCCTCGCCAGGTGCAGATaGTGTCCCTTCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVALARCR*CPFLAG
Trigger: TCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAG...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGCTTCACGGAAAGGATaGGGTCCTCCGGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCASRKG*GPPGEE
Trigger: CTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCATACATTACCACTTCTaGAGGCGAGCAGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSIHYHF*RRAGAG
Trigger: GCCCGCTCCTGCTCGCCTCCAGAAGTGGTAATGTAT...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCCACGTAGGGGGCAGATaGCAAAGACCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVAHVGGR*QRPLPT
Trigger: GGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTG...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGCACGTAGGGGGCAGATaGCAAAGACCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLHVGGR*QRPLPT
Trigger: GGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTG...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCGACTGCCCAAATGGATaGGTGTGCTTAAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: APVHGAHRTGCPGQAAASDCPNG*VCLKPR
Trigger: TCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTC...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGGCACAGCGACTCTTaGCATGGGAGCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTWHSDS*HGSQGA
Trigger: AGCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGGGTTCCAAGCACCCTaGAGCTTCCATCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIGFQAP*SFHLGC
Trigger: GCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCAGACTGTTCCAAAAATaGATTCTCCTCTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: APVHGAHRTGCPGQAAASRLFQK*ILLLAP
Trigger: TGGGGCCAAGAGGAGAATTCATTTTTGGAACAGTCT...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGCCGGGGCCAGGCCCTaGTGGCTTCTTATCATACAT +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLAGARP*WLLIIH
Trigger: ATGTATGATAAGAAGCCAGCAGGGCCTGGCCCCGGC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGGCACCACCACCTTTaGCGGGGGCTTCGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGHHHL*RGLRAL
Trigger: GAGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCACATCGTACAGGGTaGCCGGGCCAGGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPAHRTG*PGQAAA
Trigger: TGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRSGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEAGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTACGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALRARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCCACGCATGGCCCTTaGCCCCGGGTGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPATHGP*PRVPSP
Trigger: TGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGCATGGCCCGGGGGTCTaGCGAAGCCAGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEHGPGV*RSQAAR
Trigger: CCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATG...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCGCTCAGAGATGCCAGTaGCCAAGTGTGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSAQRCQ*PSVETW
Trigger: CCATGTTTCCACACTTGGGCACTGGCATCTCTGAGC...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGAGGTGAGACTGAGATaGTCAGAGATGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWEVRLR*SEMPVP
Trigger: GGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCCCAGAAAGCCCCCACTaGCTGCTTCACGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFPESPH*LLHGKD
Trigger: ATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGG...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCTTCCCTAATCACTACTaGCCTGGGATACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGFPNHY*PGIPAL
Trigger: GAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAA...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGATGGCAAAGACCTCTaGCCACCCCCAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWDGKDL*PPPAEF
Trigger: GAATTCTGCTGGGGGTGGGCAGAGGTCTTTGCCATC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTACCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASINCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CRTVRAGSSTRGSKHPEAQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...AGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPSGDPTRARGACWGRPIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGGGAGATGCCACGCATaGCCCTTGCCCCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMGRCHA*PLPPGA
Trigger: GGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGGGAGTTCCGCAGGCTaGGATGAGATTCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TPAPSGDPTRARGACWGRGSSAG*DEILLS
Trigger: GCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCTGCGGGCTGCTGGGTaGGGGAGCCACGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMLRAAG*GSHEGG
Trigger: TCCCCCTTCGTGGCTCCCCCACCCAGCAGCCCGCAG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGTCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRSSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGSSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAAAGGCACGGACATCTTaGCCGCCGCCCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPKARTS*PPPPGP
Trigger: AGGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
3UTR CAA 72 bp TTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTGGCCTCACACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVATAVKKASTA*VSVVRLASHCS
Trigger: GGAGCAGTGTGAGGCCAACCTGACCACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
3UTR CAA 72 bp AACTTGCTGTGCGCCACAAAGATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: NLLCATKILGGW*VATAVKKASTA
Trigger: CGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCACAGCAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTCCAGCCCCGTCTGGTaGCCCAACCCGGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELSSPVW*PNPGPW
Trigger: CCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CGTCCTCGGGCACAGCCCGCGAGCAGGCCACCAGCCGGTCCAGGTCCTCAAGGGTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: RPRAQPASRPPAGPGPQGCLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...CCCTTGAGGACCTGGACCGGCTGGTGGCCTGCTCGCGGGCTGTGCCCGAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGACGCAGACTGGCTaGTGCGTGTGCTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRTQTG*CVCCRC
Trigger: GCACCGGCAGCACACGCAGCAGCCAGTCTGCGTCCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGATTCCCGGCCCGGCCCTaGCACCTCCAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRFPARP*HLQGGR
Trigger: GCGTCCTCCTTGGAGGTGGCAGGGCCGGGCCGGGAA...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGGCGCTCACACCCTaGTGCAGCCGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRVALTP*CSRARA
Trigger: GGCCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCAC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCGGCCACAGCAGCCTaGAGGTCCTGCACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRAATAA*RSCTSG
Trigger: GCCGCTGGTGCAGGACCTGCAGGCTGCTGTGGCCGC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGATCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCGGGCCCGTGGTGCATaGTGGGGAAGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAERARGA*WGRPLA
Trigger: GGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGTTCCTGCCCCAATCTaGCCTCACTCCAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIVPAPI*PHSRCQ
Trigger: CTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCTTGTGCAGCTGTTCCTaGCCCAATCTGCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPLCSCS*PNLPSL
Trigger: GAGTGAGGGCAGATTGGGGCAGGAACAGCTGCACAA...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTATGCAGCCCCCAGCGGTaGCCTCGGCTCACAGGAACC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALCSPQR*PRLTGT
Trigger: GGTTCCTGTGAGCCGAGGGCACCGCTGGGGGCTGCA...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCAGGCCCATGTTCATATaGAGAACGGTCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPRPMFI*RTVRAG
Trigger: CCCAGCCCTGACCGTTCTGCATATGAACATGGGCCT...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCAAGATCAGGAGGGCTTaGGAATCACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGKIRRA*ESPSPT
Trigger: AGTAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTT...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAAGATCAGGAGGGCTTaGGAATCACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPKIRRA*ESPSPT
Trigger: AGTAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR GCA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACTGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDCPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGACCACAGCTCGCCAGGTaGAGATGGTGTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGPQLAR*RWCPFL
Trigger: CAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGG...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCAAAGCCCCCACTGCCTaGTTCACGGAAAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTKAPTA*FTERMG
Trigger: CCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTT...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLNEEAT*QKAPTA
Trigger: GGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCTTCCCTCTGGTCATCTaGACTCACTCTGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVFPLVI*THSGIV
Trigger: AACTATCCCAGAGTGAGTGCAGATGACCAGAGGGAA...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCTAATCACTACTaGCCTGGGATACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLFPNHY*PGIPAL
Trigger: GAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAA...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGATGGCAAAGACCTCTaGCCACCCCCAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSDGKDL*PPPAEF
Trigger: GAATTCTGCTGGGGGTGGGCAGAGGTCTTTGCCATC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCCCAAATGGATGGGTGTaGTTAAAACCCAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVPNGWV*LKPRRV
Trigger: GACACGTCTGGGTTTTAAGCACACCCATCCATTTGG...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGGGCTGCGGGCTGTCATAGAGCGCTTTaGCCAGCACGTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSSTRGSKHPEASIWAAGCHRAL*PARSGG
Trigger: ACCACCTGAACGTGCTGGCCAAAGCGCTCTATGACA...GCCCGCAGCCCAGATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000162330.10
ENST00000646149.2
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGGGGCCAGGCCCTGCTaGCTTCTTATCATACATGCC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTGARPC*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGCAGGGCCTGGCCCC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCTGCCCCACGCGGGTaGGCACCACCACCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPAPRG*APPPLP
Trigger: CGGCAAAGGTGGTGGTGCCCACCCGCGTGGGGCAGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCCCGGGTCAAAGGGCTTaGCCTTGGCGAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EGLRITQPYSLLHTDGETPGQRA*PWRRRG
Trigger: CCCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGG...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCAAGGCAGCGGCCTTaGTGGTGGCCACGATGCCGC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPARQRP*WWPRCR
Trigger: GCGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAACTGCTGGGTGCTGTaGCCCAGCTCCTTGACCCTC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPNCWVL*PSSLTL
Trigger: GAGGGTCAAGGAGCTGGGCCACAGCACCCAGCAGTT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGCTCCTGAGGAGGCATaGCCCCACACCCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEAPEEA*PHTLPG
Trigger: GCCGGGCAGGGTGTGGGGCCATGCCTCCTCAGGAGC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGCCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCACTGGCCGGCCCCTaGGCTTCGGCTCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPLAGP*ASAPEE
Trigger: CTCCTCAGGAGCCGAAGCCCAGGGGCCGGCCAGTGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCTGGGGAAGGCCACTaGCCGGCCCCTGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELAGEGH*PAPGLR
Trigger: CCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCCAACCCGGGCCCGTaGTGCATGCTGGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPNPGP*CMLGKA
Trigger: GGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAATGATGTGGCTGAGGTaGGGGGACAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLMMWLR*GDRCCH
Trigger: GTGACAGCATCTGTCCCCCCACCTCAGCCACATCAT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTGTCATAGAGCGCTTTaGCCAGCACGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSCHRAL*PARSSP
Trigger: AGGGGAAGAACGTGCTGGCCAAAGCGCTCTATGACA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGCCAAGTGTGGAAACATaGCCCGGGGGTCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRPSVET*PGGLPK
Trigger: CTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGG...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGACTCGCCAGGTGCAGATaGTGTCCCTTCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGLARCR*CPFLAG
Trigger: TCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAG...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCACGTAGGGGGCAGATaGCAAAGACCTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFHVGGR*QRPLPT
Trigger: GGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTG...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCTGTCATAGAGCGCTTTaGCCAGCACGTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QGPRRESHGDLPASHVGGCHRAL*PARSCF
Trigger: GAAGCAGGAACGTGCTGGCCAAAGCGCTCTATGACA...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCAGCGTCGAGGGCCTaGCCATGTGCCACCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPASRA*PCATSV
Trigger: GACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGTGTGGGGCCTGCACCTaGGGCCTGGTTACCCGGGGT +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDECGACT*GLVTRG
Trigger: ACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACA...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGGGGATGTGGCCAGAGTaGCATTCCCTAATCACTACT +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWGMWPE*HSLITT
Trigger: AGTAGTGATTAGGGAATGTCACTCTGGCCACATCCC...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAACTGGCTGCTGCGTGTaGTGCCGGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRTGCCV*CRCWRP
Trigger: CGGCCTCCAGCACCGGCAGCACACGCAGCAGCCAGT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAACGCAGACTGGCTGCTaGGTGTGCTGCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPTQTGC*VCCRCW
Trigger: CCAGCACCGGCAGCACACGCAGCAGCCAGTCTGCGT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAACATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAATCTGCCCAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGSQEPVPLCSCSCPNLPNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GGGCAGATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGCCCTTGCCCCCGGGTaGCTTCCCCAGAACCGTCAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEALAPG*LPQNRH
Trigger: GTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGGGTTGCAGGGGCCATaGCCAGGCTGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGGLQGP*PGCAFW
Trigger: CCAGAAAGCACAGCCTGGGCATGGCCCCTGCAACCC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PRRESHGDLPASHVGGRWTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGAGGTCCCCACGACAGTaGCTATCTGTCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLRSPRQ*LSVQVL
Trigger: TAGGACTTGGACAGATAGGCACTGTCGTGGGGACCT...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCACCACCTCACACACTaGCCAAGGTCCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPHHLTH*PRSQER
Trigger: TCTCTCCTGGGACCTTGGGCAGTGTGTGAGGTGGTG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTGGCCAAAGTGCCTGCTaGGTCAGCCCATCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCGQSAC*VSPSRK
Trigger: TTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCC...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGGGAGGCCGGAGGCGCTaGGGCATGGAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IISVGQSACCVSPSRKRLGGRRR*GMEARL
Trigger: CAGCCTGGCCTCCATGCCCCAGCGCCTCCGGCCTCC...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGGCCCTTCTCCACACTaGGGGGCACGTCATACACCT +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQGPSPH*GARHTP
Trigger: AGGTGTATGACGTGCCCCCCAGTGTGGAGAAGGGCC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVAILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGTGCTGCCGGTGCTaGAGGCCGACAGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRVCCRC*RPTGAC
Trigger: GCAAGCGCCTGTCGGCCTCCAGCACCGGCAGCACAC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGAAGGTGGGCAACGGTaGCGCTCACACCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHEGGQR*RSHPAA
Trigger: TGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAERRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAGGAGGCCAGCTGCTTaGCGTCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRRRPAA*RPRAQP
Trigger: GGGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAACAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGCAGCGGCCTTGGTGGTaGCCACGATGCCGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEQRPWW*PRCRAG
Trigger: TCCTGCGCGGCATCGTGGCCACCACCAAGGCCGCTG...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: EGLRITQPYSLLHTDGETLSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCAGGCGGCTGCCAGCTaGCCTAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTAGGCCAGCTGGCAGCCGCCTG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PWFSSRETHSSSALPGDAQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCCCGTGGTGCATGCTaGGGAAGGCCACTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELARGAC*GRPLAG
Trigger: GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGGCAGGTGCTCACTGTaGCAGCTCCCTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQGRCSL*QLPRVA
Trigger: TGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGGGCTGCGGGCTGCTaGGTGGGGGAGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELWAAGC*VGEPRR
Trigger: CCTTCGTGGCTCCCCCACCCAGCAGCCCGCAGCCCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCCTGAAGCTTCCATCTaGGCTGCGGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQPEASI*AAGCWV
Trigger: CACCCAGCAGCCCGCAGCCCAGATGGAAGCTTCAGG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCCTCACCAAGGCAGGTaGGCTGAGCATGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPPHQGR*AEHDVA
Trigger: AGCCACATCATGCTCAGCCCACCTGCCTTGGTGAGG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCDGVPS*QDAGVS
Trigger: GGACACCCCGGCGTCCTGCCAGGAAGGGACACCATC...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAACAATGCTTTGCACTTaGCCAGCTTCCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRTMLCT*PASLWS
Trigger: TGACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCATACATTACCACTTCTaGAGGCGAGCAGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSIHYHF*RRAGAG
Trigger: GCCCGCTCCTGCTCGCCTCCAGAAGTGGTAATGTAT...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAEARPG*DVARVT
Trigger: TGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTC...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGACAGTGTGTCCCCGATaGACACCAGCTTGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGTVCPR*TPACGR
Trigger: GCGCCCACAAGCTGGTGTTCATCGGGGACACACTGT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCTGGGCTTCGGCTCCTaGGGAGGCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELLGFGS*GGMAPH
Trigger: GTGTGGGGCCATGCCTCCTCAGGAGCCGAAGCCCAG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTATTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp CCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGAGGAGAGGGTAGGAGATaGCTCAGAGCCCGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PTPSRILLGCDYKGEGRRGEGRR*LRARDG
Trigger: ACCATCACGGGCTCTGAGTCATCTCCTACCCTCTCC...TCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGATGTCGTACTCGTCCTaGTCCGGCTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEMSYSS*SGWAAS
Trigger: CGAGGCCGCCCAGCCGGAGCAGGACGAGTACGACAT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCAGTACCAGTGGGGTaGGGGCCGGGTCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPVPVG*GPGQRA
Trigger: AGCCCTTTGACCCGGCCCGCACCCCACTGGTACTGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAGGCCGACAGGCGCTTaGCCTCTGCCGGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELRPTGA*PLPGLH
Trigger: GTGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCATGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEACVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGCGTGTGCTGCCGGTaGTGGAGGCCGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELCVCCR*WRPTGA
Trigger: AGCGCCTGTCGGCCTCCAGCACCGGCAGCACACGCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAETLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCAGTCGCACCGGCGCTaGCTGCCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEQSHRR*LPGPEG
Trigger: ACCTTCTGGACCTGGCAGGCAGCGCCGGTGCGACTG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWFSSRETHSSSALPGDASLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAGGACGCGGCGGAACTaGTGGGTGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELRTRRN*WVLWPS
Trigger: GCTGGGCCACAGCACCCAGCAGTTCCGCCGCGTCCT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAENPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAAACCCGGGCCCGTGGTaGATGCTGGGGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGNPGPW*MLGKAT
Trigger: AGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTT...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCGGGCTGCTCTCATCTaGCACCCTCAGGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMRAALI*HPQAAA
Trigger: AGCAGCTGCCTGAGGGTGGCAGATGAGAGCAGCCCG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCCCTTGCCCCCGGGTaGCTTCCCCAGAACCGTCAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELALAPG*LPQNRH
Trigger: GTGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCGTTCCTGCCCCAATCTaGCCTCACTCCAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: PWFSSRETHSSSALPGDAVPAPI*PHSRCQ
Trigger: CTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGAACCCGTCCCCTTGTaGAGCTGTTCCTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQEPVPL*SCSCPN
Trigger: ATTGGGGCAGGAACAGCTGCACAAGGGGACGGGTTC...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGTCCTCCAGCTGATCTaGCTCCTCTCATTACTCATT +
Preference number: 4 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRVLQLI*LLSLLI
Trigger: AATGAGTAATGAGAGGAGGCAGATCAGCTGGAGGAC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCAGAAAGCCCCCACTaGCTGCTTCACGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFPESPH*LLHGKD
Trigger: ATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGG...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LQVPTTVPICPSPTQPAVNEEAT*QKAPTA
Trigger: GGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATT...AACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGTTCCCTAATCACTACTaGCCTGGGATACCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRFPNHY*PGIPAL
Trigger: GAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAA...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCGATGGCAAAGACCTCTaGCCACCCCCAGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFDGKDL*PPPAEF
Trigger: GAATTCTGCTGGGGGTGGGCAGAGGTCTTTGCCATC...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCTGTCATAGAGCGCTTTaGCCAGCACGTTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TVRAGSSTRGSKHPEASICHRAL*PARSGG
Trigger: ACCACCTGAACGTGCTGGCCAAAGCGCTCTATGACA...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000162330.10
ENST00000646149.2
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCTGGCCATACTGGCTaGGAAGCAGCCCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPGHTG*EAAPEP
Trigger: CGGTTCGGGGGCTGCTTCCCAGCCAGTATGGCCAGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACGCAGCCAGTACCAGTaGGGTGCGGGCCGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRRSQYQ*GAGRVK
Trigger: TTTGACCCGGCCCGCACCCCACTGGTACTGGCTGCG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCCAGGTCCAGAAGGTaGGCAACGGTGGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPARSRR*ATVALT
Trigger: TGTGAGCGCCACCGTTGCCCACCTTCTGGACCTGGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAATGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTATGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: PWFSSRETHSSSALPGDAPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGGGCTGGCGTCCAGTTaGCCAGGTCGTGGTCTATGG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALGLASS*PGRGLW
Trigger: CCATAGACCACGACCTGGCCAACTGGACGCCAGCCC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGCGTCCACGGCGTTaGTCAGTGTGGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRRPRR*SVWSGW
Trigger: CCAACCTGACCACACTGACCAACGCCGTGGACGCCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCAGCACGTTCCTGCTTCCCCTCCCATCCCCTTCTGAAGCATCTTATAATTTCAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: ASTFLLPLPSPSEASYNFRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...GAAATTATAAGATGCTTCAGAAGGGGATGGGAGGGGAAGCAGGAACGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAGGCAGCGGCCTTGGTaGTGGCCACGATGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELRQRPW*WPRCRA
Trigger: TGCGCGGCATCGTGGCCACCACCAAGGCCGCTGCCT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGCCGCGGAAGGCGATaGGTACTGCAAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELGRGRR*VLQGSG
Trigger: GCCGCTGCCTTGCAGTACCCATCGCCTTCCGCGGCC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTCTCCACCATGTCCTaGGCCGCGGAAGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAELSTMS*AAEGDG
Trigger: CCCATCGCCTTCCGCGGCCCAGGACATGGTGGAGAG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCTGAAGCTTCCATCTaGGCTGCGGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMPEASI*AAGCWV
Trigger: CACCCAGCAGCCCGCAGCCCAGATGGAAGCTTCAGG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCTCCAGCAGGCTCAGGTaGTCCGCCTTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEASSRLR*SALSLC
Trigger: GCAGAGGGACAAGGCGGACCACCTGAGCCTGCTGGA...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDDGVPS*QDAGVS
Trigger: GGACACCCCGGCGTCCTGCCAGGAAGGGACACCATC...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACCTCGCCAGGTGCAGATaGTGTCCCTTCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDLARCR*CPFLAG
Trigger: TCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAG...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTGGCCTTGGTCCGTCTaGAGAGCAGTGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGWPWSV*RAVRHC
Trigger: GCAATGCCTCACTGCTCTTCAGACGGACCAAGGCCA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGTGGCCAGCACGTTTCTaGGGCAGGGATCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMWPARF*GRDPWV
Trigger: CACCCAAGGATCCCTGCCTCAGAAACGTGCTGGCCA...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR TCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACGAGAGAGAGCCACGGTaGTCTGCCAGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDEREPR*SASQPR
Trigger: ACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTC...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGACCCTGCTGCAGCCGTaGCAGGGCCTCCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELTLLQP*QGLHSN
Trigger: GTTGCTGTGGAGGCCCTGGCACGGCTGCAGCAGGGT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAATGTGTGGGCAGCATTaGCCACCGCGCTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRMCGQH*PPRCGQ
Trigger: TTGCCCGCAGCGCGGTGGGCAATGCTGCCCACACAT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDSLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGTGTGGCCAGGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GVARLQVPTTVPICPSPTMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...GGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCCTGGCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAESAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAGTGGGTCACCTGGCTaGGCACGTCAGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAESGSPG*ARQQPW
Trigger: CCAAGGCTGCTGACGTGCGCAGCCAGGTGACCCACT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGGTGGTGGCCACGATaGCGCGCAGGAGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELWWWPR*RAGGRT
Trigger: TGTGCGACCTCCTGCGCGGCATCGTGGCCACCACCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACGAGGTCCTGCAGGCTaGAGGACCCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRRGPAG*RTLTLQ
Trigger: CTGGAGTGTGAGGGTCCTGCAGCCTGCAGGACCTCG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGACCCACTCCTCCTCTaGCCTCCCGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELDPLLL*PPGRCH
Trigger: GTGGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGGGTTGCAGGGGCCATaGCCAGGCTGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEGLQGP*PGCAFW
Trigger: CCAGAAAGCACAGCCTGGGCATGGCCCCTGCAACCC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCTCACCAGGGCAGTaGATGCCCTCTCCTGACACT +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDASPGQ*MPSPDT
Trigger: AGTGTCAGGAGAGGGCATGCACTGCCCTGGTGAGGC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCATGTCCCTCTGCCCAGTaGCCACAGGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEACPSAQ*PQEQGW
Trigger: CCAGCCCTGCTCCTGTGGGCACTGGGCAGAGGGACA...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCTTCCCCTGCATTGTaGCGACATCTGGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGSSPAL*RHLGTR
Trigger: CCGAGTCCCCAGATGTCGGCACAATGCAGGGGAAGA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp CTGCCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGGCTCAGAGATGCCAGTaGCCAAGTGTGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: LPTPSRILLGCDYKGEGRAQRCQ*PSVETW
Trigger: CCATGTTTCCACACTTGGGCACTGGCATCTCTGAGC...CCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCCCACAGCTCGCCAGGTaGAGATGGTGTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCPQLAR*RWCPFL
Trigger: CAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGG...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGGTGTGGCCAGGCTaGAGGTCCCCACGACAGTGC +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQMVWPG*RSPRQC
Trigger: GCACTGTCGTGGGGACCTGCAGCCTGGCCACACCAT...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACCAAATGGATGGGTGTaGTTAAAACCCAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLPNGWV*LKPRRV
Trigger: GACACGTCTGGGTTTTAAGCACACCCATCCATTTGG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCGTGGGCCAAAGTGCCTaGTGCGTCAGCCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCVGQSA*CVSPSR
Trigger: CCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCAC...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTTTCTGTGGGCCAAAGTaGCTGCTGCGTCAGCCCATC +
Preference number: 4 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIFCGPK*LLRQPI
Trigger: GATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAA...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAETSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGLRITQPYSLLHTDGETRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAAGGAGGACGCAGACTaGCTGCTGCGTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRKEDAD*LLRVLP
Trigger: CGGCAGCACACGCAGCAGCCAGTCTGCGTCCTCCTT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVRLKSSEALPCRKEASCSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACAGTTGGCCAGGTCGTaGTCTATGGGCCGTGACACC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPQLARS*SMGRDT
Trigger: GGTGTCACGGCCCATAGACCACGACCTGGCCAACTG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTSLGVP*FSSRET
Trigger: GGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGGCAGGTGCTCACTGTaGCAGCTCCCTAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALGRCSL*QLPRVA
Trigger: TGCAACCCTAGGGAGCTGCCACAGTGAGCACCTGCC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGASAQV*KHGPGV
Trigger: GACCCCCGGGCCATGTTTCCACACTTGGGCACTGGC...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEASAQV*KHGPGV
Trigger: GACCCCCGGGCCATGTTTCCACACTTGGGCACTGGC...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEADGVPS*QDAGVS
Trigger: GGACACCCCGGCGTCCTGCCAGGAAGGGACACCATC...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDQGNDG*RPQLAR
Trigger: CCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTG...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGCTTCACGGAAAGGATaGGGTCCTCCGGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPASRKG*GPPGEE
Trigger: CTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTACAATGCTTTGCACTTaGCCAGCTTCCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCTMLCT*PASLWS
Trigger: TGACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGT...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCCAGCAGAATTCTCCTaGGCTGTGACTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPPAEFS*AVTTRE
Trigger: CTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTCATAGAGCGCTTTaGCCAGCACGTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGCHRAL*PARSCF
Trigger: GAAGCAGGAACGTGCTGGCCAAAGCGCTCTATGACA...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATCCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: GDLPIEARPGWDVARVTFCLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGCLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCATTGCCCACCGCGCTaGGGGCAAACTCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEHCPPR*GQTPTA
Trigger: AGCTGTTGGAGTTTGCCCGCAGCGCGGTGGGCAATG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCCGGCTAAGCTTGGCATaGAGGGCACGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCRLSLA*RARSDV
Trigger: CACATCTGACCGTGCCCTGCATGCCAAGCTTAGCCG...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: HGDNLCRGKIRRACESPSSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGAGGGCCTGACCATGTaGCACCAGCGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELEGLTM*HQRLVH
Trigger: GTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMRAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAGCTGGCTCTTGCCCTaGCGCGTGATGCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRSWLLP*RVMLPF
Trigger: AAAGGGCAGCATCACGCGGCAGGGCAAGAGCCAGCT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGAATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QPNQIKRGPPHRGPPRLGMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...TCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTCAGCAGCCTTGGCCTaGCGTGACAGTGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELSAALA*RDSVSP
Trigger: CGGGGACACACTGTCACGGCAGGCCAAGGCTGCTGA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGTCGCACAGCAGGTTaGTGTAGTGGGTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRGRTAG*CSGSPG
Trigger: GCCAGGTGACCCACTACAGCAACCTGCTGTGCGACC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRREGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAGTTCCTGCCCCAATCTaGCCTCACTCCAGATGCCAG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALVPAPI*PHSRCQ
Trigger: CTGGCATCTGGAGTGAGGGCAGATTGGGGCAGGAAC...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGAAGGGGGACACACTTaGCCAGGGCAAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMEGGHT*PGQGSS
Trigger: AGAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAAAGATCAGGAGGGCTTaGGAATCACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQKIRRA*ESPSPT
Trigger: AGTAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTT...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCGTAGCCAGGATCACTTaGTGTTCTCAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFVARIT*CSQEVR
Trigger: TCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTAC...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCGTAGCCAGGATCACTTaGTGTTCTCAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LVRLKSSEALPCRKEASCVARIT*CSQEVR
Trigger: TCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTAC...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGCCACAGCTCGCCAGGTaGAGATGGTGTCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQPQLAR*RWCPFL
Trigger: CAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGG...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCACCACCTCACACACTaGCCAAGGTCCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAHHLTH*PRSQER
Trigger: TCTCTCCTGGGACCTTGGGCAGTGTGTGAGGTGGTG...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACGTGGGCCAAAGTGCCTaGTGCGTCAGCCCATCTAGG +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDVGQSA*CVSPSR
Trigger: CCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCAC...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGACCTCCTGGCCATACTaGCTGGGAAGCAGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELTSWPY*LGSSPR
Trigger: TCGGGGGCTGCTTCCCAGCCAGTATGGCCAGGAGGT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAAGACTGCGTGGTGGTTaGACGGTGGCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGRLRGG*TVAGPS
Trigger: AGAAGGGCCTGCCACCGTCCAACCACCACGCAGTCT...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRLLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGGCTTCACGTTCAGCTaGGGGAGGCACCGCATACAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEGFTFS*GRHRIH
Trigger: GTGTATGCGGTGCCTCCCCCAGCTGAACGTGAAGCC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGCACCAGCGGCTCCTGTaGCTCAGAGGGGCTACGCCA +
Preference number: 4 (lower is better)
Translates to: IISVGQSACCVSPSRKRLHQRLL*LRGATP
Trigger: TGGCGTAGCCCCTCTGAGCCACAGGAGCCGCTGGTG...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCACGGTCAGATGTGTaGGCAGCATTGCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELARSDV*AALPTA
Trigger: CGCGGTGGGCAATGCTGCCCACACATCTGACCGTGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATGTGCCACCAGCGTCTaGTGCACGTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPCATSV*CTSSIF
Trigger: GAAGATGGAGGACGTGCACCAGACGCTGGTGGCACA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGATGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGATGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGCTGCAACTCCAGCTaGCTCTTGCCCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELCCNSS*LLPCRV
Trigger: CACGCGGCAGGGCAAGAGCCAGCTGGAGTTGCAGCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EGLRITQPYSLLHTDGETPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDRRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAAGATCTTGGGCGGCTaGTTGGTGGCCACGGCGGTA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRKILGG*LVATAV
Trigger: TACCGCCGTGGCCACCAACCAGCCGCCCAAGATCTT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCGCCACAAAGATCTTaGGCGGCTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRAPQRS*AAGWWP
Trigger: TGGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGCCAGCTGTGGGCATaGGCAGGTGCTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELCQLWA*AGAHCG
Trigger: GCCACAGTGAGCACCTGCCCATGCCCACAGCTGGCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCTGTCCATCTGTCATGTaGGGCCTGCACCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCCPSVM*GLHLRP
Trigger: AGGCCTCAGGTGCAGGCCCCACATGACAGATGGACA...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAQGNDG*RPQLAR
Trigger: CCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTG...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCTTCACGGAAAGGATaGGGTCCTCCGGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEASRKG*GPPGEE
Trigger: CTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGC...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGACCAGCAGAATTCTCCTaGGCTGTGACTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTPSRILLGCDYKGEGRRPAEFS*AVTTRE
Trigger: CTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGG...TCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGAGCAGTCGCCACTCTaGGTTCCAAGGGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEEQSPL*VPRAGL
Trigger: AAGCCCTGCCCTTGGAACCCAGAGTGGCGACTGCTC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGAAAAGACTGCCCAAATaGATGGGTGTGCTTAAAACC +
Preference number: 4 (lower is better)
Translates to: AQGPRRESHGDLPASHVGKRLPK*MGVLKT
Trigger: GGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTT...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCGTCTGAAGAGCAGTaGGGCATTGCCGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGPSEEQ*GIAVQE
Trigger: TTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGG...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGTGGTCTATGGGCCGTaGCACCTCCTGTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELVVYGP*HLLFQS
Trigger: CGACTGGAACAGGAGGTGTCACGGCCCATAGACCAC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR TCA 90 bp CCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGAGGGATGTGGCCAGAGTaGCATTCCCTAATCACTACT +
Preference number: 4 (lower is better)
Translates to: PTPSRILLGCDYKGEGRRGMWPE*HSLITT
Trigger: AGTAGTGATTAGGGAATGTCACTCTGGCCACATCCC...TCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAGTGAGGCATTGCCGTaGAGGAAGGAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELSEALP*RKEASC
Trigger: GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAGAGCAGTGAGGCATTaGCGTGCAGGAAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAERAVRH*RAGRRP
Trigger: TGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGGGTCGTGACTGGATaGTGCTGGTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRGVVTG*CWSCQW
Trigger: CCACTGACAAGACCAGCAGCATCCAGTCACGACCCC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTCGCTGTTCTCGTACTaGCCATCTGGCGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAESLFSY*PSGESW
Trigger: CCAGGACTCGCCAGATGGGCAGTACGAGAACAGCGA...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAACTGCTTCAGCTGCTaGAACTCCAGCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHNCFSC*NSSWLL
Trigger: CAAGAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGAAGGCGATGGGTACTaGAAGGCAGCGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELEGDGY*KAAALV
Trigger: CACCAAGGCCGCTGCCTTGCAGTACCCATCGCCTTC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAAGGCCCATGTTCATATaGAGAACGGTCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALRPMFI*RTVRAG
Trigger: CCCAGCCCTGACCGTTCTGCATATGAACATGGGCCT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAAGATCAGGAGGGCTTaGGAATCACCCAGCCCTACT +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHKIRRA*ESPSPT
Trigger: AGTAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCGAGGTGAGACTGAGATaGTCAGAGATGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAEVRLR*SEMPVP
Trigger: GGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTC...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGAGTAGCCAGGATCACTTaGTGTTCTCAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PTPSRILLGCDYKGEGRRVARIT*CSQEVR
Trigger: TCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTAC...TCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCCCAGAAAGCCCCCACTaGCTGCTTCACGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCPESPH*LLHGKD
Trigger: ATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGG...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACAGGTCCCCACGACAGTaGCTATCTGTCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDRSPRQ*LSVQVL
Trigger: TAGGACTTGGACAGATAGGCACTGTCGTGGGGACCT...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGTCCCCACGACAGTaGCTATCTGTCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRSPRQ*LSVQVL
Trigger: TAGGACTTGGACAGATAGGCACTGTCGTGGGGACCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGCACCACCTCACACACTaGCCAAGGTCCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEHHLTH*PRSQER
Trigger: TCTCTCCTGGGACCTTGGGCAGTGTGTGAGGTGGTG...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACACCACCTCACACACTaGCCAAGGTCCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRHHLTH*PRSQER
Trigger: TCTCTCCTGGGACCTTGGGCAGTGTGTGAGGTGGTG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGATCATAGATGTCCTGTaGCCCCGGGGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELIIDVL*PRGQQV
Trigger: CACCTGCTGGCCCCGGGGCCACAGGACATCTATGAT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGCTGGTCTTGTCAGTaGGGTTGGGGTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELCWSCQ*GWGAGC
Trigger: GCACCCTGCACCCCAACCCCACTGACAAGACCAGCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACTCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCAGGTCGTGGTCTATaGGCCGTGACACCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPGRGL*AVTPPV
Trigger: AACAGGAGGTGTCACGGCCCATAGACCACGACCTGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAERRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCACGTCAGCAGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELARQQP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCCAAGGCTGCTGACGTGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCAGCGACTCTTGACATaGGAGCCAGGGAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELQRLLT*EPGSWD
Trigger: GTCCCAGCTCCCTGGCTCCCATGTCAAGAGTCGCTG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCGGGAGTTCCGCAGGCTaGGATGAGATTCTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: PWFSSRETHSSSALPGDAGSSAG*DEILLS
Trigger: GCTTAAAAGAATCTCATCCCAGCCTGCGGAACTCCC...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAATGATGTGGCTGAGGTaGGGGGACAGATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPMMWLR*GDRCCH
Trigger: GTGACAGCATCTGTCCCCCCACCTCAGCCACATCAT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTGTCATAGAGCGCTTTaGCCAGCACGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGCHRAL*PARSSP
Trigger: AGGGGAAGAACGTGCTGGCCAAAGCGCTCTATGACA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: IISVGQSACCVSPSRKRLASAQV*KHGPGV
Trigger: GACCCCCGGGCCATGTTTCCACACTTGGGCACTGGC...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACTGTCCATCTGTCATGTaGGGCCTGCACCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDCPSVM*GLHLRP
Trigger: AGGCCTCAGGTGCAGGCCCCACATGACAGATGGACA...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAAAAGACTGCCCAAATaGATGGGTGTGCTTAAAACC +
Preference number: 4 (lower is better)
Translates to: TKSNGDLPIEARPGWDVAKRLPK*MGVLKT
Trigger: GGTTTTAAGCACACCCATCCATTTGGGCAGTCTTTT...GGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGAGCCTTGGCCTGCCGTaGCAGTGTGTCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: IISVGQSACCVSPSRKRLSLGLP*QCVPDE
Trigger: TTCATCGGGGACACACTGTCACGGCAGGCCAAGGCT...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTCLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR TCA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTGGCCTCCTCAGCACATaGAAGCAATTTTCCGAACAC +
Preference number: 4 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIGLLST*KQFSEH
Trigger: GTGTTCGGAAAATTGCTTTCATGTGCTGAGGAGGCC...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGCATCGGGCACATCCTTaGTCACCGATGGAGGAACGT +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQHRAHP*SPMEER
Trigger: ACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATG...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGATCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTCCATCTTCTGCAGCTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAESIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAGCTGCAGAAGATGGA...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTCGTGACTGGATGCTaGTGGTCTTGTCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRVVTGC*WSCQWG
Trigger: ACCCCACTGACAAGACCAGCAGCATCCAGTCACGAC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTACATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQNEEAT*QKAPTA
Trigger: GGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATT...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGTGTCATACACCTCCTaGCCATACTGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEVSYTS*PYWLGS
Trigger: GCTTCCCAGCCAGTATGGCCAGGAGGTGTATGACAC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAATCCTTGCTCACCGATaGAGGAACGTCGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALILAHR*RNVVDC
Trigger: GCAGTCTACGACGTTCCTCCATCGGTGAGCAAGGAT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGCAGGGGTCGTGACTaGATGCTGCTGGTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELGRGRD*MLLVLS
Trigger: TGACAAGACCAGCAGCATCCAGTCACGACCCCTGCC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCCATCTGGCGAGTCCTaGGAGGTGAACTTAGGGGGT +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELPSGES*EVNLGG
Trigger: ACCCCCTAAGTTCACCTCCCAGGACTCGCCAGATGG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACGGCGTTGGTCAGTGTaGTCAGGTTGGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEARRWSV*SGWPHT
Trigger: AGTGTGAGGCCAACCTGACCACACTGACCAACGCCG...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAGCCTCGGCGTTCCTTaGTTTTCTTCTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHSLGVP*FSSRET
Trigger: GGTCTCTCTAGAAGAAAACCAAGGAACGCCGAGGCT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGATACATTACCACTTCTaGAGGCGAGCAGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEIHYHF*RRAGAG
Trigger: GCCCGCTCCTGCTCGCCTCCAGAAGTGGTAATGTAT...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAATACATTACCACTTCTaGAGGCGAGCAGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGIHYHF*RRAGAG
Trigger: GCCCGCTCCTGCTCGCCTCCAGAAGTGGTAATGTAT...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR TCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATTCCGCAGGCTGGGATaGGATTCTTTTAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPFRRLG*DSFKQS
Trigger: GCTCTGCTTAAAAGAATCTCATCCCAGCCTGCGGAA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR TCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGATGTGGCCAGAGTaGCATTCCCTAATCACTACT +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPGMWPE*HSLITT
Trigger: AGTAGTGATTAGGGAATGTCACTCTGGCCACATCCC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGATCAAACTGCTTCAGCTaGTGCAACTCCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRSNCFS*CNSSWL
Trigger: GAGCCAGCTGGAGTTGCAGCAGCTGAAGCAGTTTGA...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTATCCAGTCGTTCAAACTaGTTCAGCTGCTGCAACTCC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALSSRSN*FSCCNS
Trigger: GGAGTTGCAGCAGCTGAAGCAGTTTGAACGACTGGA...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FLGFLLERPTPPLPSREMMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTAATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTTSVEVRSGGLANHPALMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCATGGCCCCACACCCTaGCCGGCCATAAATATATAC +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEHGPTP*PAINIY
Trigger: GTATATATTTATGGCCGGGCAGGGTGTGGGGCCATG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAGGTATAATTCCATGTaGACTTCGGGAGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRYNSM*TSGVPQ
Trigger: CTGCGGAACTCCCGAAGTGCACATGGAATTATACCT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGGCTCAGAGATGCCAGTaGCCAAGTGTGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQAQRCQ*PSVETW
Trigger: CCATGTTTCCACACTTGGGCACTGGCATCTCTGAGC...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEANEEAT*QKAPTA
Trigger: GGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATT...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGTGACTGGATGCTGCTaGTCTTGTCAGTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELVTGCC*SCQWGW
Trigger: CCAACCCCACTGACAAGACCAGCAGCATCCAGTCAC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGATCCAGCAGCTCCTTCTaGGTCTTCTCAAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRSSSSF*VFSNSS
Trigger: GGAGGAGTTTGAGAAGACCCAGAAGGAGCTGCTGGA...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAAAGAGAGGAAGGGCTTaGCAGGCATGTTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPKRGRA*QACSVF
Trigger: GAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCCAGCAGAATTCTCCTaGGCTGTGACTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDPAEFS*AVTTRE
Trigger: CTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGG...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGACTGCCCAAATGGATaGGTGTGCTTAAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHDCPNG*VCLKPR
Trigger: TCTGGGTTTTAAGCACACCCATCCATTTGGGCAGTC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGGGATGTGGCCAGAGTaGCATTCCCTAATCACTACT +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEGMWPE*HSLITT
Trigger: AGTAGTGATTAGGGAATGTCACTCTGGCCACATCCC...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAATGACGAACTTGCTGTaGGCCACAAAGATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRMTNLL*ATKILG
Trigger: GCCCAAGATCTTTGTGGCGCACAGCAAGTTCGTCAT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR GCA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATAGGTATAATTCCATGTaGACTTCGGGAGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: VPWFSSRETHSSSALPGDRYNSM*TSGVPQ
Trigger: CTGCGGAACTCCCGAAGTGCACATGGAATTATACCT...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGTCCTCCAGCTGATCTaGCTCCTCTCATTACTCATT +
Preference number: 4 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPVLQLI*LLSLLI
Trigger: AATGAGTAATGAGAGGAGGCAGATCAGCTGGAGGAC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACGTAGCCAGGATCACTTaGTGTTCTCAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDVARIT*CSQEVR
Trigger: TCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTAC...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp TCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACAGTGCTTCCCTCTGGTCATCTaGACTCACTCTGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: SKSYPARCSSLVTDEAQCFPLVI*THSGIV
Trigger: AACTATCCCAGAGTGAGTGCAGATGACCAGAGGGAA...GCACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACACAGATGAGGCACAGTaGCAAAGAAGGCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDTDEAQ*QRRLPK
Trigger: TTTGGGCAGCCTTCTTTGGCACTGTGCCTCATCTGT...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACCAGCAGAATTCTCCTaGGCTGTGACTACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAPAEFS*AVTTRE
Trigger: CTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGG...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: ALTVDNQTKSNGDLPIEAKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...GGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGTTCCCTCTGGTCATCTaGACTCACTCTGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: AYLSKSYPARCSSLVTDEFPLVI*THSGIV
Trigger: AACTATCCCAGAGTGAGTGCAGATGACCAGAGGGAA...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CCA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAATATATACAGATTCCTaGGCATCCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRIYTDS*ASRAPG
Trigger: TCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAACAATGCTTTGCACTTaGCCAGCTTCCCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEATMLCT*PASLWS
Trigger: TGACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGT...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR GCA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAGGTATAATTCCATGTaGACTTCGGGAGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: INIYRFLGIQGTRTDAELRYNSM*TSGVPQ
Trigger: CTGCGGAACTCCCGAAGTGCACATGGAATTATACCT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR GCA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAAGACGAGACGATTATaGTCTGAACCAGAACGGATG +
Preference number: 4 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEKTRRL*SEPERM
Trigger: CATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR TCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAAGACTGTTCCAAAAATaGATTCTCCTCTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEARLFQK*ILLLAP
Trigger: TGGGGCCAAGAGGAGAATTCATTTTTGGAACAGTCT...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR TCA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCATGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCT +
Preference number: 4 (lower is better)
Translates to: YLSKSYPARCSSLVTDEACLPSF*RRDDYA
Trigger: AGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACA...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS TCA 90 bp GAGGCCCCGCGAGGGGTCCCGGCGCTTTCCGGCTCCTCCGGCTCCTaGGCGTTCCCGGACGCCGGACTGTCCGGCCGCTCCAGCCGCGCC +
Preference number: 5 (lower is better)
Translates to: EAPRGVPALSGSSGS*AFPDAGLSGRSSRA
Trigger: GGCGCGGCTGGAGCGGCCGGACAGTCCGGCGTCCGGGAACGCTCAGGAGCCGGAGGAGCCGGAAAGCGCCGGGACCCCTCGCGGGGCCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000538440.6
ENST00000643425.1
ENST00000644430.1
CDS GCA 90 bp CTAGGACTCCTGTGGCCAGGACCCGGCTTCCACCGGCGCTCGGCGTaGGGGGCTGCAAAGCCCGCGGCGCGCCCGCCCCCACTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: LGLLWPGPGFHRRSA*GAAKPAARPPPLPL
Trigger: GAGCGGGAGTGGGGGCGGGCGCGCCGCGGGCTTTGCAGCCCCGCACGCCGAGCGCCGGTGGAAGCCGGGTCCTGGCCACAGGAGTCCTAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561970.1
ENST00000644018.1
CDS CCA 90 bp GCCCTGGCCCCCTCCCGCGACACTCGCGTGCGGCTAGGACTCCTGTaGCCAGGACCCGGCTTCCACCGGCGCTCGGCGTGCGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALAPSRDTRVRLGLL*PGPGFHRRSACGAA
Trigger: TGCAGCCCCGCACGCCGAGCGCCGGTGGAAGCCGGGTCCTGGCCACAGGAGTCCTAGCCGCACGCGAGTGTCGCGGGAGGGGGCCAGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561970.1
ENST00000644018.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASAQGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTTG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCAAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSQGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTTG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCATAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLIGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTAT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418647.7
ENST00000644430.1
CDS-3UTR CAA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSLGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTAA...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538440.6
ENST00000643425.1
CDS-3UTR CAA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: ARGACWGRPLAGPWASAPEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGAGGCAGGGATCCTaGGGTGTGGGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASALRQGS*GVGLGA
Trigger: TGCCCCCAGGCCCACACCCAAGGATCCCTGCCTCAG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SGDPTRARGACWGRPLAGEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: ARGACWGRPLAGPWASAPKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASAPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: GPWCMLGKATGRPLGFGSRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...GGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASARTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCAGGAACCCGTCCCCTaGTGCAGCTGTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLQEPVP*CSCSCP
Trigger: GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGATAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRIGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTAT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418647.7
ENST00000644430.1
CDS GCA 90 bp ACCAGCTCTGGGTCGCCCAACCAGTCCCCTCCCCCAACACTACACTaGCCTGTGGCCCTGGCCGGGCTCCTAGGCCCTGTGTCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: TSSGSPNQSPPPTLH*PVALAGLLGPVSGR
Trigger: GCGCCCGGACACAGGGCCTAGGAGCCCGGCCAGGGCCACAGGGCAGTGTAGTGTTGGGGGAGGGGACTGGTTGGGCGACCCAGAGCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563323.1
ENST00000643475.1
CDS CCA 90 bp GCTCCGGCTGGGCGGCCTCGTATACATAGCCCTGCCCCACGCGGGTaGGCACCACCACCTGGGGGCAGAGAGCCGACTTCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: APAGRPRIHSPAPRG*APPPGGREPTSLLP
Trigger: GGGCAGCAGTGAAGTCGGCTCTCTGCCCCCAGGTGGTGGTGCCCACCCGCGTGGGGCAGGGCTATGTATACGAGGCCGCCCAGCCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564170.1
ENST00000645595.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TCCCCGGCCAGCGTCGAGGGCCTGACCATGTGCCACCAGCGTCTGGTGCACGTCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPASVEGLTMCHQRLVHVAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GACGTGCACCAGACGCTGGTGGCACATGGTCAGGCCCTCGACGCTGGCCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PGCLPQNRHPPRAALICHEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASAWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASAILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASACATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: SGDPTRARGACWGRPLAGCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RARGACWGRPLAGPWASAVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...AGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCACTGGCTCCCAGGGCCTaGTGGCCAGCTGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSLAPRA*WPAAGL
Trigger: GAGGCCTGCAGCTGGCCACAAGGCCCTGGGAGCCAG...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS GCA 90 bp AGCGCTTTGGCCAGCACGTTCTCCAACCCCGAGGCTCCAGGCCCCTaGCCGAGGCCAGGCTTCCAGCCTAGGGCGCAGGACACCGCTCTC +
Preference number: 5 (lower is better)
Translates to: SALASTFSNPEAPGP*PRPGFQPRAQDTAL
Trigger: GAGAGCGGTGTCCTGCGCCCTAGGCTGGAAGCCTGGCCTCGGGCAGGGGCCTGGAGCCTCGGGGTTGGAGAACGTGCTGGCCAAAGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564028.1
ENST00000645048.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: ARGACWGRPLAGPWASAPILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCATGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCACCCGTTCACGGGGCACATCGTACAGGGTGCCCGGGCCAGGCCGCCGCAAGCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: APVHGAHRTGCPGQAAASVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GCTTGCGGCGGCCTGGCCCGGGCACCCTGTACGATGTGCCCCGTGAACGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGGAACCCGTCCCCTaGTGCAGCTGTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGQEPVP*CSCSCP
Trigger: GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: VTQPGPVVHAGEGHWPAPWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...AGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: ARGACWGRPLAGPWASAPWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QPGPVVHAGEGHWPAPGLKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...AAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCTAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ARGACWGRPLAGPWASAPKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...AGGAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SGDPTRARGACWGRPLAGVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCTCCGTTCTTCCCCTGCATaGTGCCGACATCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: GPVVHAGEGHWPAPGLRLRSSPA*CRHLGT
Trigger: AGTCCCCAGATGTCGGCACAATGCAGGGGAAGAACG...GAGCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS GCA 90 bp GTGTGGGCCTGGGGGCAGCCAGAGGAGCCTCACCAGGGCAGTGCATaGCCTCTCCTGACACTACCAGGTGTCTGTGAAGGCGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: VWAWGQPEEPHQGSA*PLLTLPGVCEGGGC
Trigger: GCAGCCGCCGCCTTCACAGACACCTGGTAGTGTCAGGAGAGGGCATGCACTGCCCTGGTGAGGCTCCTCTGGCTGCCCCCAGGCCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS GCA 90 bp GAGGTCAAGGCCTCCCTGGTGGGATTCTCCAGCCCCCGGGCACACTaGGCCCACACGCCTCCACCACCAGGCTCCCTGTTCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: EVKASLVGFSSPRAH*AHTPPPPGSLFSSL
Trigger: GAGAGAGCTGAACAGGGAGCCTGGTGGTGGAGGCGTGTGGGCGCAGTGTGCCCGGGGGCTGGAGAATCCCACCAGGGAGGCCTTGACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS CCA 90 bp AGGCAGGGAAACGATGGCTGGAGGCCACAGCTCGCCAGGTGCAGATaGTGTCCCTTCCTGGCAGGACGCCGGGGTGTCCGCCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: RQGNDGWRPQLARCR*CPFLAGRRGVRLPP
Trigger: AGGTGGGAGGCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp TCCTTCCCTGAAGGTCTCCCTGCCTTGGGGAGGTCAAGGCCTCCCTaGTGGGATTCTCCAGCCCCCGGGCACACTGCGCCCACACGCCTC +
Preference number: 5 (lower is better)
Translates to: SFPEGLPALGRSRPP*WDSPAPGHTAPTRL
Trigger: GAGGCGTGTGGGCGCAGTGTGCCCGGGGGCTGGAGAATCCCACCAGGGAGGCCTTGACCTCCCCAAGGCAGGGAGACCTTCAGGGAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS-3UTR CAA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: SGDPTRARGACWGRPLAGNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: LQPRLVTQPGPVVHAGEGPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...GCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RLVTQPGPVVHAGEGHWPKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...CGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: SGDPTRARGACWGRPLAGWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...GCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGTCCAGAAGGTGGGCAACGGTGGCGCTCACACCCTGCTGCAGCCGTGCCAGGGAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GPEGGQRWRSHPAAAVPGNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...CCCTGGCACGGCTGCAGCAGGGTGTGAGCGCCACCGTTGCCCACCTTCTGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACTCCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: TPAPSGDPTRARGACWGRILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...CCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCATGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: AQGPRRESHGDLPASHVGCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...CCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CCGGGCCCGTGGTGCATGCTGGGGAAGGCCACTGGCCGGCCCCTGGGCTTCGGCGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PGPWCMLGKATGRPLGFGEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...GCCGAAGCCCAGGGGCCGGCCAGTGGCCTTCCCCAGCATGCACCACGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS GCA 90 bp CTCAGAGATGCCAGTGCCCAAGTGTGGAAACATGGCCCGGGGGTCTaGCGAAGCCAGGCTGCCCGGCCAGGAAGAGGGGGTGTCGGACAG +
Preference number: 5 (lower is better)
Translates to: LRDASAQVWKHGPGV*RSQAARPGRGGVGQ
Trigger: CTGTCCGACACCCCCTCTTCCTGGCCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGGGCACTGGCATCTCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp ATGGCTGGAGGCCACAGCTCGCCAGGTGCAGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCCGCCTCCCACCTCCCACTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: MAGGHSSPGADGVPS*QDAGVSASHLPLQS
Trigger: AGACTGAAGTGGGAGGTGGGAGGCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp GCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AAGPHDSAYLSKSYPARCEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...ACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCGGGTGCCTTCCCCAGAACCGTCACCCACCCCGGGCTGCTCTCATCTGCCACAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PGCLPQNRHPPRAALICHKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...GTGGCAGATGAGAGCAGCCCGGGGTGGGTGACGGTTCTGGGGAAGGCACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCGGGAGATGCCACGCATGGCCCTTGCCCCCGGGTGCCTTCCCCAGAACCGTCATGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: PGDATHGPCPRVPSPEPSWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...TGACGGTTCTGGGGAAGGCACCCGGGGGCAAGGGCCATGCGTGGCATCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTATGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCACGTTCTTCCCCTGCATaGTGCCGACATCTGGGGACT +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPRSSPA*CRHLGT
Trigger: AGTCCCCAGATGTCGGCACAATGCAGGGGAAGAACG...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS GCA 90 bp CTAACTAGGCAGGGAAACGATGGCTGGAGGCCACAGCTCGCCAGGTaGAGATGGTGTCCCTTCCTGGCAGGACGCCGGGGTGTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LTRQGNDGWRPQLAR*RWCPFLAGRRGVRL
Trigger: GAGGCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTGCCTAGTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACATGGGCACCACCACCTTaGCCGGGGGCTTCGTGCCCT +
Preference number: 5 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTWAPPP*PGASCP
Trigger: AGGGCACGAAGCCCCCGGCAAAGGTGGTGGTGCCCA...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CGGCTGGTTGGTGGCCACGGCGGTAAAGAAGGCGTCCACGGCGTTGGTCAGTGTCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: RLVGGHGGKEGVHGVGQCPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...ACACTGACCAACGCCGTGGACGCCTTCTTTACCGCCGTGGCCACCAACCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CAAGGTCCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: QGPRRESHGDLPASHVGGWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...GCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGGACCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp AGCGGTGCCCTCGGCTCACAGGAACCCGTCCCCTTGTGCAGCTGTTCCTGCCCCAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SGALGSQEPVPLCSCSCPKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTGTGAGCCGAGGGCACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PRRESHGDLPASHVGGRWCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAAACTGCCCCCTTTCTaGGGCCCAGGCTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVKLPPF*GPGSAL
Trigger: CAGGGCAGAGCCTGGGCCCAAGAAAGGGGGCAGTTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: ESHGDLPASHVGGRWQRPLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...AGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp TCCAGAAGCAGCAGAGGCCGACCCCAGGCTGAGACACGGTGGAGCTaGGTGGCTCCACTTTATCTCCACCGAGGGGTGACGCCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SRSSRGRPQAETRWS*VAPLYLHRGVTPGF
Trigger: GAACCCAGGCGTCACCCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCCACCGTGTCTCAGCCTGGGGTCGGCCTCTGCTGCTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS-3UTR CAA 90 bp GCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGAAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: APGPTQSWGPVPKPVAQRNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...TCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: RFLGIQGTRTDAELGSCPNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...GGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CAGGAGGTCGCACAGCAGGTTGCTGTAGTGGGTCACCTGGCTGCGCACGTCAGCATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: QEVAQQVAVVGHLAAHVSILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...GCTGACGTGCGCAGCCAGGTGACCCACTACAGCAACCTGCTGTGCGACCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCTGAGGCAGGGATCCTaGGGTGTGGGCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPLRQGS*GVGLGA
Trigger: TGCCCCCAGGCCCACACCCAAGGATCCCTGCCTCAG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393422.6
ENST00000646604.1
CDS-3UTR CAA 90 bp CCAGCCCCGTCTGGTGACCCAACCCGGGCCCGTGGTGCATGCTGGGGAAGGCCAGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PAPSGDPTRARGACWGRPEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...TGGCCTTCCCCAGCATGCACCACGGGCCCGGGTTGGGTCACCAGACGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CAA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTTAGGCACGGACATCTaGGCCGCCGCCCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGLGTDI*AAAPGA
Trigger: GGCCCCGGGGGCGGCGGCCAAGATGTCCGTGCCTAA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538440.6
ENST00000643425.1
CDS GCA 90 bp CGCCCAGGCTGGGATGTGGCCAGAGTGACATTCCCTAATCACTACTaGCCTGGGATACCGGCCCTCCAGCAGGCTCAGGTGGTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: RPGWDVARVTFPNHY*PGIPALQQAQVVRL
Trigger: AAGGCGGACCACCTGAGCCTGCTGGAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAATGTCACTCTGGCCACATCCCAGCCTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp GAGGAACGTCGTAGACCCAGACACCCCACAGCCTCAGCCTGGCCCTaGCATTGCCCTGGCATTTGCTCACTGCGTGGTGGTTGGACGGTG +
Preference number: 5 (lower is better)
Translates to: EERRRPRHPTASAWP*HCPGICSLRGGWTV
Trigger: CACCGTCCAACCACCACGCAGTGAGCAAATGCCAGGGCAATGCCAGGGCCAGGCTGAGGCTGTGGGGTGTCTGGGTCTACGACGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393420.10
ENST00000646430.1
CDS CCA 90 bp TCAGGAGGTGAGACTGAGATGCTCAGAGATGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTCTGCCGAAGCCAGGCTGCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: SGGETEMLRDASAQV*KHGPGVCRSQAARP
Trigger: TGGCCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp ACTGAGTCCAGAAGCAGCAGAGGCCGACCCCAGGCTGAGACACGGTaGAGCTGGGTGGCTCCACTTTATCTCCACCGAGGGGTGACGCCT +
Preference number: 5 (lower is better)
Translates to: TESRSSRGRPQAETR*SWVAPLYLHRGVTP
Trigger: AGGCGTCACCCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCCACCGTGTCTCAGCCTGGGGTCGGCCTCTGCTGCTTCTGGACTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTACCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: HGDNLCRGKIRRACESPSAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: PWFSSRETHSSSALPGDAKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp ATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: IPGHPGHQDRRRAGVLSLKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...TAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTCAGGAACCCGTCCCCTaGTGCAGCTGTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPQEPVP*CSCSCP
Trigger: GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTG...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACACGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAGGGTAGCCAGGATCACTaGCTGTTCTCAGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: ASQPRRGQMAKTSAHPQQGSQDH*LFSGGE
Trigger: CTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACC...CTGCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS GCA 90 bp CATCGTAGGTCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCCAGACACCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: HRRSPHAAVGHRAHP*SPMEERRRPRHPTA
Trigger: GGCTGTGGGGTGTCTGGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGACCTACGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393420.10
ENST00000646430.1
CDS GCA 90 bp GCCTCTCGGACCCTCGAGAGGGAGCTCCGACCCTGCTCTAGCTCTTaGGGGTCCCCCAACCATGGACTCCAAAGCCTTCATGTCCACACT +
Preference number: 5 (lower is better)
Translates to: ASRTLERELRPCSSS*GSPNHGLQSLHVHT
Trigger: AGTGTGGACATGAAGGCTTTGGAGTCCATGGTTGGGGGACCCGCAAGAGCTAGAGCAGGGTCGGAGCTCCCTCTCGAGGGTCCGAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561970.1
ENST00000644018.1
CDS GCA 90 bp CATCGTAGGTCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCTGGGGGACAAGCGGTG +
Preference number: 5 (lower is better)
Translates to: HRRSPHAAVGHRAHP*SPMEERRRPGGQAV
Trigger: CACCGCTTGTCCCCCAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGACCTACGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS GCA 90 bp CATGGCCAGCAGAGCTCGCACCTTCCACCTCATAACCCAGGCGTGTaGCTACTGGTAAGCACCCCAGGTGACCCCAGACCGCAGAGCATG +
Preference number: 5 (lower is better)
Translates to: HGQQSSHLPPHNPGV*LLVSTPGDPRPQSM
Trigger: CATGCTCTGCGGTCTGGGGTCACCTGGGGTGCTTACCAGTAGGCACACGCCTGGGTTATGAGGTGGAAGGTGCGAGCTCTGCTGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569006.1
ENST00000644080.1
CDS CCA 90 bp GGGCTCTGGAGGGAAAAGCCCCTAACTAGGCAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGGTGCAGATGGTGTCCCTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GLWREKPLTRQGNDG*RPQLARCRWCPFLA
Trigger: TGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTGCCTAGTTAGGGGCTTTTCCCTCCAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp CTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTGCTCACCGATaGAGGAACGTCGTAGACCTGGGGGACAAGCGGTGGTCAAGACTG +
Preference number: 5 (lower is better)
Translates to: LLTQQWAIGHILAHR*RNVVDLGDKRWSRL
Trigger: CAGTCTTGACCACCGCTTGTCCCCCAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS-3UTR CAA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: FLGFLLERPTPPLPSREMAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: PWFSSRETHSSSALPGDAPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...GGCATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAGCACCCTGAAGCTTCCATCAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TVRAGSSTRGSKHPEASIKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GATGGAAGCTTCAGGGTGCTTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGGCACAGCGACTCTTGACAAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PTQSWGPVPKPVAQRLLTKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...TGTCAAGAGTCGCTGTGCCACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATCTGGCTCCCAGGGCCTaGTGGCCAGCTGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: VPWFSSRETHSSSALPGDLAPRA*WPAAGL
Trigger: GAGGCCTGCAGCTGGCCACAAGGCCCTGGGAGCCAG...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CTGCCAGCCAGCCACGTAGGGGGCAGATGGCAAAGACCTCTGCCCACCCCCAGCAACAATGCTTTGCACTaGGCCAGCTTCCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LPASHVGGRWQRPLPTPSNNALH*ASFPLV
Trigger: GACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGTT...GCTGGGGGTGGGCAGAGGTCTTTGCCATCTGCCCCCTACGTGGCTGGCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS GCA 90 bp CATCGTAGGTCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCTCCTGGCCATACTGGC +
Preference number: 5 (lower is better)
Translates to: HRRSPHAAVGHRAHP*SPMEERRRPPGHTG
Trigger: GCCAGTATGGCCAGGAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGACCTACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569340.1
ENST00000642792.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: YTDSWASRAPGPTQSWGPKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...AGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGGGGTTCCAAATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: AHVHMQNGQGWEQHQGFQILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...TTGGAACCCCTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GAGGGCTTGCGAATCACCCAGCCCTACTCCCTTCTTCATACAGATGGGGAAACCTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: EGLRITQPYSLLHTDGETCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...GGTTTCCCCATCTGTATGAAGAAGGGAGTAGGGCTGGGTGATTCGCAAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GGGGACCTCCCCATAGAGGCCCGCCCAGGCTGGGATGTGGCCAGAGTGACATTCGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GDLPIEARPGWDVARVTFEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...GAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp CAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACCTCCCCCTCAGGTGGTCCGCCTaGTCCCTCTGCCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: QSLALTVDNQTKSNGDLPLRWSA*SLCPVP
Trigger: GGGCACTGGGCAGAGGGACAAGGCGGACCACCTGAG...GGGGAGGTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGAACAATGCTTTGCACTaGGCCAGCTTCCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVNNALH*ASFPLV
Trigger: GACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGTT...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp CCCAGGAGAGAGAGCCACGGTGATCTGCCAGCCAGCCACGTAGGGGGCAGATGGCCCGCTGTTCCTCTCTaGTTACAGATGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PRRESHGDLPASHVGGRWPAVPL*LQMRHS
Trigger: ACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGG...CCATCTGCCCCCTACGTGGCTGGCTGGCAGATCACCGTGGCTCTCTCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS TCA 90 bp AGACACGGTGGAGCTGGGTGGCTCCACTTTATCTCCACCGAGGGGTaGCGCCTGGGTTCGTGGAAACCACCAGAGGAAATGTCACAGGCC +
Preference number: 5 (lower is better)
Translates to: RHGGAGWLHFISTEG*RLGSWKPPEEMSQA
Trigger: GGCCTGTGACATTTCCTCTGGTGGTTTCCACGAACCCAGGCGTCACCCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCCACCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS TCA 90 bp CACACTCGCAGCCCTAGCACACACATCCTTCACAATTCCTATCCATaGCAGCTCTGGGACGAGCCGGCTCTGGAGCCAGGTGACCACCCC +
Preference number: 5 (lower is better)
Translates to: HTRSPSTHILHNSYP*QLWDEPALEPGDHP
Trigger: GGGGTGGTCACCTGGCTCCAGAGCCGGCTCGTCCCAGAGCTGTCATGGATAGGAATTGTGAAGGATGTGTGTGCTAGGGCTGCGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS CCA 90 bp GAGCGCTTTGGCCAGCACGTTCTTCCCCTGCATTGTGCCGACATCTaGGGACTCGGGCTGGTCCTCCAGCTGATCTGCCTCCTCTCATTA +
Preference number: 5 (lower is better)
Translates to: ERFGQHVLPLHCADI*GLGLVLQLICLLSL
Trigger: TAATGAGAGGAGGCAGATCAGCTGGAGGACCAGCCCGAGTCCCCAGATGTCGGCACAATGCAGGGGAAGAACGTGCTGGCCAAAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGCCGGGTCAAAGGGCTaGGCCTTGGCGAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELAGSKG*ALAKAG
Trigger: CCCCGCCTTCGCCAAGGCCAAGCCCTTTGACCCGGC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGGATGTGTGGGCAGCATaGCCCACCGCGCTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEDVWAA*PTALRA
Trigger: TGCCCGCAGCGCGGTGGGCAATGCTGCCCACACATC...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGCCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: FLGFLLERPTPPLPSREMPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GAAACCAAGGCCCATGTTCATATGCAGAACGGTCAGGGCTGGGAGCAGCACCAGTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: ETKAHVHMQNGQGWEQHQWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...CTGGTGCTGCTCCCAGCCCTGACCGTTCTGCATATGAACATGGGCCTTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CACGGGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCTGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: HGDNLCRGKIRRACESPSWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...GCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAECKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: AYLSKSYPARCSSLVTDECKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...CTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCTGGCTCCCAGGGCCTaGTGGCCAGCTGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELLAPRA*WPAAGL
Trigger: GAGGCCTGCAGCTGGCCACAAGGCCCTGGGAGCCAG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCACAGGAACCCGTCCCCTaGTGCAGCTGTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPQEPVP*CSCSCP
Trigger: GGGGCAGGAACAGCTGCACAAGGGGACGGGTTCCTG...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GGCTGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GCRSPRQCLSVQVLPSPLEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...CAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS TCA 90 bp CACCTCCCACTTCAGTCTGTCCATCTGTCATGTGGGGCCTGCACCTaGGGCCTGGTTACCCGGGGTAGCCAGGATCACTTGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: HLPLQSVHLSCGACT*GLVTRGSQDHLLFS
Trigger: TGAGAACAGCAAGTGATCCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACATGACAGATGGACAGACTGAAGTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS GCA 90 bp GGGGTAGCCAGGATCACTTGCTGTTCTCAGGAGGTGAGACTGAGATaGTCAGAGATGCCAGTGCCCAAGTGTGGAAACATGGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GVARITCCSQEVRLR*SEMPVPKCGNMARG
Trigger: CCCCCGGGCCATGTTTCCACACTTGGGCACTGGCATCTCTGAGCATCTCAGTCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp CACTTCAGTCTGTCCATCTGTCATGTGGGGCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGGATCACTTGCTGTTCTCAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HFSLSICHVGPAPEA*LPGVARITCCSQEV
Trigger: CACCTCCTGAGAACAGCAAGTGATCCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACATGACAGATGGACAGACTGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp CAAACCAAATCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACATTCCCTAATCACTACTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QTKSNGDLPIEARPG*DVARVTFPNHYCPG
Trigger: CCCAGGGCAGTAGTGATTAGGGAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGATTTGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 90 bp CCCAATCCCAGACTGGGAATTCGGAGGCCACATGTGGTGCTGCACTaGGGGGCCATGCCAGAAGACGAGGTTCTGGATCCAATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PNPRLGIRRPHVVLH*GAMPEDEVLDPILR
Trigger: CCTCAGAATTGGATCCAGAACCTCGTCTTCTGGCATGGCCCCCCAGTGCAGCACCACATGTGGCCTCCGAATTCCCAGTCTGGGATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGGAGGCCGACAGGCGCTaGCCCTCTGCCGGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: IISVGQSACCVSPSRKRLEADRR*PSAGAS
Trigger: TGAAGCCCCGGCAGAGGGCAAGCGCCTGTCGGCCTC...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAAGGAGGCCAGCTGCTaGGCGTCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGACGCCAAGCAGCTGGCCTCCTT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATGGGCTGGCGTCCAGTaGGCCAGGTCGTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPWAGVQ*ARSWSM
Trigger: CATAGACCACGACCTGGCCAACTGGACGCCAGCCCA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PHTLPGHKYIQIPGHPGHKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: VPWFSSRETHSSSALPGDILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: FLGFLLERPTPPLPSREMILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...CATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCATGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGCAAGGCAGCGGCCTaGGTGGTGGCCACGATGCCG +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELCKAAA*VVATMP
Trigger: CGGCATCGTGGCCACCACCAAGGCCGCTGCCTTGCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATGTGGCACAGCGACTCTaGACATGGGAGCCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: VPWFSSRETHSSSALPGDVAQRL*TWEPGS
Trigger: GCTCCCTGGCTCCCATGTCAAGAGTCGCTGTGCCAC...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCACAATAACAATGCTTaGCACTTGGCCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QIPGHPGHQDRRRAGVLSHNNNA*HLASFP
Trigger: AGGGAAGCTGGCCAAGTGCAAAGCATTGTTATTGTG...GGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp GCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGTCCTGTCCCTAAGCCTGTGCACAATAACAATGCTTaGCACTTGGCCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ASRAPGPTQSWGPVPKPVHNNNA*HLASFP
Trigger: AGGGAAGCTGGCCAAGTGCAAAGCATTGTTATTGTG...CACAGGCTTAGGGACAGGACCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS TCA 90 bp GGGCCGCAAAGGCACAGCGTTGGAACCAGAGGGTTCCTACCAAGTTaGCAACTCCAAAAGAGCATGGTGGTCCCCCAAGGACCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: GPQRHSVGTRGFLPS*QLQKSMVVPQGPEL
Trigger: GAGCTCTGGTCCTTGGGGGACCACCATGCTCTTTTGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTTTGCGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS-3UTR CAA 90 bp GGGACAACCTCTGTAGAGGTAAGATCAGGAGGGCTTGCGAATCACCCAGCCCTACCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: GTTSVEVRSGGLANHPALPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...TAGGGCTGGGTGATTCGCAAGCCCTCCTGATCTTACCTCTACAGAGGTTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACCCGGGGCAGTGGCCTaGGTCCGTCTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAPGAVA*VRLKSS
Trigger: ACTGCTCTTCAGACGGACCAAGGCCACTGCCCCGGG...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp GTTCCTTGGTTTTCTTCTAGAGAGACCCACTCCTCCTCTGCCCTCCCGGGAGATTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: VPWFSSRETHSSSALPGDWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...ATCTCCCGGGAGGGCAGAGGAGGAGTGGGTCTCTCTAGAAGAAAACCAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAENSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCATGGCCCCACACCCTGCCCGGCCATAAATATATACAGATTCCTGGGCATCCAAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AWPHTLPGHKYIQIPGHPKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...TGGATGCCCAGGAATCTGTATATATTTATGGCCGGGCAGGGTGTGGGGCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACATCTTGGGCGGCTGGTaGGTGGCCACGGCGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDILGGW*VATAVK
Trigger: CTTTACCGCCGTGGCCACCAACCAGCCGCCCAAGAT...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAECATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACTGCGCCACAAAGATCTaGGGCGGCTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDCATKI*GGWLVA
Trigger: GGCCACCAACCAGCCGCCCAAGATCTTTGTGGCGCA...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGCGCACGTCAGCAGCCTaGGCCTGCCGTGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELRTSAA*ACRDSV
Trigger: CACACTGTCACGGCAGGCCAAGGCTGCTGACGTGCG...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACGAAGGGGGACACACTaGCCCAGGGCAAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRRRGTH*PRARVF
Trigger: GAAGACCCTTGCCCTGGGCAAGTGTGTCCCCCTTCG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp TTGGTCCGTCTGAAGAGCAGTGAGGCATTGCCGTGCAGGAAGGAGGCCAGCTGCCCCGCTGTTCCTCTCTaGTTACAGATGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: LVRLKSSEALPCRKEASCPAVPL*LQMRHS
Trigger: ACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGG...GCAGCTGGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTTCAGACGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGACCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCCATCGGGCACATCCTaGCTCACCGATGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEPSGTS*LTDGGT
Trigger: CGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGG...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AINIYRFLGIQGTRTDAEKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...CTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp GGCCATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GHKYIQIPGHPGHQDRRRKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...TCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp CATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGACAAGGCGTCCACGGCGTaGGTCAGTGTGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: HAQSLALTVDNQTKSNGDKASTA*VSVVRL
Trigger: CAACCTGACCACACTGACCAACGCCGTGGACGCCTT...GTCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAAACTGCCCCCTTTCTaGGGCCCAGGCTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELKLPPF*GPGSAL
Trigger: CAGGGCAGAGCCTGGGCCCAAGAAAGGGGGCAGTTT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000646149.2
ENST00000646604.1
CDS-3UTR CAA 90 bp CCCACCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGAAACAATGCTTTGCACTaGGCCAGCTTCCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: PTPSRILLGCDYKGEGRRNNALH*ASFPLV
Trigger: GACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGTT...TCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp GCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCCACAATAACAATGCTTaGCACTTGGCCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: AGPHDSAYLSKSYPARCSHNNNA*HLASFP
Trigger: AGGGAAGCTGGCCAAGTGCAAAGCATTGTTATTGTG...GGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS GCA 90 bp CATTGTGCCGACATCTGGGGACTCGGGCTGGTCCTCCAGCTGATCTaGCTCCTCTCATTACTCATTCCTAGGTTCAGCCTAAAACCTGGG +
Preference number: 5 (lower is better)
Translates to: HCADIWGLGLVLQLI*LLSLLIPRFSLKPG
Trigger: CCCAGGTTTTAGGCTGAACCTAGGAATGAGTAATGAGAGGAGGCAGATCAGCTGGAGGACCAGCCCGAGTCCCCAGATGTCGGCACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS GCA 90 bp CTGGTCATCTGCACTCACTCTGGGATAGTTAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCCTGCTTCACGGAAAGGATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LVICTHSGIVNEEAT*QKAPTACFTERMGS
Trigger: GGACCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATTAACTATCCCAGAGTGAGTGCAGATGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAACGGGTCTCGGCCATaGGGACCCTTGACAGCCATG +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELNGSRP*GPLTAM
Trigger: CATGGCTGTCAAGGGTCCCAATGGCCGAGACCCGTT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGAAGAGCAGTGAGGCATaGCCGTGCAGGAAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELKSSEA*PCRKEA
Trigger: GGCCTCCTTCCTGCACGGCAATGCCTCACTGCTCTT...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAAATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGTGGATGCTGCTGGTCTaGTCAGTGGGGTTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: INIYRFLGIQGTRTDAELWMLLV*SVGLGC
Trigger: GCACCCCAACCCCACTGACAAGACCAGCAGCATCCA...CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000162330.10
ENST00000393422.6
ENST00000418647.7
ENST00000535626.6
ENST00000538440.6
ENST00000562556.5
ENST00000643425.1
ENST00000644039.1
ENST00000644430.1
ENST00000646149.2
ENST00000646604.1
ENST00000647035.1
CDS-3UTR CAA 90 bp ATAATTTCTGTGGGCCAAAGTGCCTGCTGCGTCAGCCCATCTAGGAAAAGACTGAACTCCAGCTGGCTCTaGCCCTGCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: IISVGQSACCVSPSRKRLNSSWL*PCRVML
Trigger: CAGCATCACGCGGCAGGGCAAGAGCCAGCTGGAGTT...CAGTCTTTTCCTAGATGGGCTGACGCAGCAGGCACTTTGGCCCACAGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp AATATATACAGATTCCTGGGCATCCAGGGCACCAGGACCGACGCAGAGCTGGGGGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: NIYRFLGIQGTRTDAELGEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...CCCCAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418647.7
ENST00000562556.5
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CAA 90 bp CCCCCAGCAGAATTCTCCTGGGCTGTGACTACAAGGGAGAGGGTAGGAGATGACGAAGAGAGGAAGGGCTaGGCAGGCATGTTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PPAEFSWAVTTRERVGDDEERKG*AGMFCL
Trigger: AAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC...GTCATCTCCTACCCTCTCCCTTGTAGTCACAGCCCAGGAGAATTCTGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp TGCAGGTCCCCACGACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCACAATAACAATGCTTaGCACTTGGCCAGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: CRSPRQCLSVQVLPSPLFHNNNA*HLASFP
Trigger: AGGGAAGCTGGCCAAGTGCAAAGCATTGTTATTGTG...GAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGTCGTGGGGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp AGGCAGCTCAGTCTGGAAGCCTCCGCAGGGCCTCCTCAGCACATGAAAGCAATTCCCGCTGTTCCTCTCTaGTTACAGATGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: RQLSLEASAGPPQHMKAIPAVPL*LQMRHS
Trigger: ACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGG...AATTGCTTTCATGTGCTGAGGAGGCCCTGCGGAGGCTTCCAGACTGAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562556.5
ENST00000644039.1
CDS-3UTR CAA 90 bp ACAGTGCCTATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGGGTAGCCAGGATCACTaGCTGTTCTCAGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TVPICPSPTQPAVPLLLQGSQDH*LFSGGE
Trigger: CTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACC...CTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATAGGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp CCATGCCCAGAGCTTGGCTCTGACTGTGGACAACCAAACCAAATCAAACGGGGAGGTAGCCAGGATCACTaGCTGTTCTCAGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PCPELGSDCGQPNQIKRGGSQDH*LFSGGE
Trigger: CTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACC...TCCCCGTTTGATTTGGTTTGGTTGTCCACAGTCAGAGCCAAGCTCTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS TCA 90 bp GAAGAGAGGAAGGGCTTGGCAGGCATGTTCTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCTCTGAACCAGAACGGATGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: EERKGLAGMFCLPSF*RRDDYALNQNGWRG
Trigger: GCCCCGCCATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACAGAACATGCCTGCCAAGCCCTTCCTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418647.7
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
ENST00000644430.1
CDS-3UTR CAA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAGGTAGCCAGGATCACTaGCTGTTCTCAGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAGSQDH*LFSGGE
Trigger: CTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACC...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCAAACAATGCTTTGCACTaGGCCAGCTTCCCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: YLSKSYPARCSSLVTDEANNALH*ASFPLV
Trigger: GACCAGAGGGAAGCTGGCCAAGTGCAAAGCATTGTT...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS-3UTR CAA 90 bp TATCTGTCCAAGTCCTACCCAGCCCGCTGTTCCTCTCTTGTTACAGATGAGGCACCCGCTGTTCCTCTCTaGTTACAGATGAGGCACAGT +
Preference number: 5 (lower is better)
Translates to: YLSKSYPARCSSLVTDEAPAVPL*LQMRHS
Trigger: ACTGTGCCTCATCTGTAACAAGAGAGGAACAGCGGG...TGCCTCATCTGTAACAAGAGAGGAACAGCGGGCTGGGTAGGACTTGGACAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp CCCTCCCGCGACACTCGCGTGCGGCTAGGACTCCTGTaGCCAGGACCCGGCTTCCACCGGCGCTCGGCGTGC +
Preference number: 6 (lower is better)
Translates to: PSRDTRVRLGLL*PGPGFHRRSAC
Trigger: GCACGCCGAGCGCCGGTGGAAGCCGGGTCCTGGCCACAGGAGTCCTAGCCGCACGCGAGTGTCGCGGGAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561970.1
ENST00000644018.1
CDS GCA 72 bp GCCTCCCTGGTGGGATTCTCCAGCCCCCGGGCACACTaGGCCCACACGCCTCCACCACCAGGCTCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: ASLVGFSSPRAH*AHTPPPPGSLF
Trigger: GAACAGGGAGCCTGGTGGTGGAGGCGTGTGGGCGCAGTGTGCCCGGGGGCTGGAGAATCCCACCAGGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS CCA 72 bp GGCCACAGCTCGCCAGGTGCAGATGGTGTCCCTTCCTaGCAGGACGCCGGGGTGTCCGCCTCCCACCTCCCA +
Preference number: 6 (lower is better)
Translates to: GHSSPGADGVPS*QDAGVSASHLP
Trigger: TGGGAGGTGGGAGGCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp GAAGGTCTCCCTGCCTTGGGGAGGTCAAGGCCTCCCTaGTGGGATTCTCCAGCCCCCGGGCACACTGCGCCC +
Preference number: 6 (lower is better)
Translates to: EGLPALGRSRPP*WDSPAPGHTAP
Trigger: GGGCGCAGTGTGCCCGGGGGCTGGAGAATCCCACCAGGGAGGCCTTGACCTCCCCAAGGCAGGGAGACCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS CCA 72 bp AACGATGGCTGGAGGCCACAGCTCGCCAGGTGCAGATaGTGTCCCTTCCTGGCAGGACGCCGGGGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: NDGWRPQLARCR*CPFLAGRRGVR
Trigger: GCGGACACCCCGGCGTCCTGCCAGGAAGGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp AGGCCCGCACAGTGGGTGAAGAGGCAGGCAGCACAATaGCCTGCCCAGGGCCACAGGACCCCTCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: RPAQWVKRQAAQ*PAQGHRTPHQH
Trigger: GTGCTGGTGAGGGGTCCTGTGGCCCTGGGCAGGCCATTGTGCTGCCTGCCTCTTCACCCACTGTGCGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS CCA 72 bp GATGCTCAGAGATGCCAGTGCCCAAGTGTGGAAACATaGCCCGGGGGTCTGCCGAAGCCAGGCTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: DAQRCQCPSVET*PGGLPKPGCPA
Trigger: GGCCGGGCAGCCTGGCTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGGGCACTGGCATCTCTGAGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS GCA 72 bp CCCCAACCATGGACTCCAAAGCCTTCATGTCCACACTaGAGAACCCGGCCCTGGCCCCCTCCCGCGACACTC +
Preference number: 6 (lower is better)
Translates to: PQPWTPKPSCPH*RTRPWPPPATL
Trigger: GAGTGTCGCGGGAGGGGGCCAGGGCCGGGTTCTGCAGTGTGGACATGAAGGCTTTGGAGTCCATGGTTGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561970.1
ENST00000644018.1
CDS CCA 72 bp AGCAGAGGCCGACCCCAGGCTGAGACACGGTGGAGCTaGGTGGCTCCACTTTATCTCCACCGAGGGGTGACG +
Preference number: 6 (lower is better)
Translates to: SRGRPQAETRWS*VAPLYLHRGVT
Trigger: CGTCACCCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCCACCGTGTCTCAGCCTGGGGTCGGCCTCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS CCA 72 bp ATGACCCAGAGCCCAGGGAAGCCAAGGCCCGCACAGTaGGTGAAGAGGCAGGCAGCACAATGGCCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: MTQSPGKPRPAQ*VKRQAAQWPAQ
Trigger: CTGGGCAGGCCATTGTGCTGCCTGCCTCTTCACCCACTGTGCGGGCCTTGGCTTCCCTGGGCTCTGGGTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566982.1
ENST00000644785.1
CDS CCA 72 bp GGCCAGCACGTTCTTCCCCTGCATTGTGCCGACATCTaGGGACTCGGGCTGGTCCTCCAGCTGATCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GQHVLPLHCADI*GLGLVLQLICL
Trigger: GAGGCAGATCAGCTGGAGGACCAGCCCGAGTCCCCAGATGTCGGCACAATGCAGGGGAAGAACGTGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS CCA 72 bp AGAAGCAGCAGAGGCCGACCCCAGGCTGAGACACGGTaGAGCTGGGTGGCTCCACTTTATCTCCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: RSSRGRPQAETR*SWVAPLYLHRG
Trigger: CCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCCACCGTGTCTCAGCCTGGGGTCGGCCTCTGCTGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS CCA 72 bp CAGCAGTGGGCCATCGGGCACATCCTTGCTCACCGATaGAGGAACGTCGTAGACCTGGGGGACAAGCGGTGG +
Preference number: 6 (lower is better)
Translates to: QQWAIGHILAHR*RNVVDLGDKRW
Trigger: CCACCGCTTGTCCCCCAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS GCA 72 bp TCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: SPHAAVGHRAHP*SPMEERRRPGG
Trigger: TCCCCCAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS GCA 72 bp CAGAGCTCGCACCTTCCACCTCATAACCCAGGCGTGTaGCTACTGGTAAGCACCCCAGGTGACCCCAGACCG +
Preference number: 6 (lower is better)
Translates to: QSSHLPPHNPGV*LLVSTPGDPRP
Trigger: CGGTCTGGGGTCACCTGGGGTGCTTACCAGTAGGCACACGCCTGGGTTATGAGGTGGAAGGTGCGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569006.1
ENST00000644080.1
CDS GCA 72 bp TCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: SPHAAVGHRAHP*SPMEERRRPPG
Trigger: GCCAGGAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569340.1
ENST00000642792.1
CDS CCA 72 bp CAGCAGTGGGCCATCGGGCACATCCTTGCTCACCGATaGAGGAACGTCGTAGACCCAGACACCCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: QQWAIGHILAHR*RNVVDPDTPQP
Trigger: AGGCTGTGGGGTGTCTGGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393420.10
ENST00000646430.1
CDS TCA 72 bp GAGCCGGCTCTGGAGCCAGGTGACCACCCCTGTGCCTaGAGGTGGGAGAGCTTCCTCCCAAAGAATTGCATG +
Preference number: 6 (lower is better)
Translates to: EPALEPGDHPCA*RWESFLPKNCM
Trigger: CATGCAATTCTTTGGGAGGAAGCTCTCCCACCTTCAGGCACAGGGGTGGTCACCTGGCTCCAGAGCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS GCA 72 bp TCTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACCGATGGAGGAACGTCGTAGACCCAGACAC +
Preference number: 6 (lower is better)
Translates to: SPHAAVGHRAHP*SPMEERRRPRH
Trigger: GTGTCTGGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393420.10
ENST00000646430.1
CDS CCA 72 bp GAGACTGAGATGCTCAGAGATGCCAGTGCCCAAGTGTaGAAACATGGCCCGGGGGTCTGCCGAAGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: ETEMLRDASAQV*KHGPGVCRSQA
Trigger: AGCCTGGCTTCGGCAGACCCCCGGGCCATGTTTCCACACTTGGGCACTGGCATCTCTGAGCATCTCAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp AGGGAAAAGCCCCTAACTAGGCAGGGAAACGATGGCTaGAGGCCACAGCTCGCCAGGTGCAGATGGTGTCCC +
Preference number: 6 (lower is better)
Translates to: REKPLTRQGNDG*RPQLARCRWCP
Trigger: GGGACACCATCTGCACCTGGCGAGCTGTGGCCTCCAGCCATCGTTTCCCTGCCTAGTTAGGGGCTTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp CAGCAGTGGGCCATCGGGCACATCCTTGCTCACCGATaGAGGAACGTCGTAGACCTCCTGGCCATACTGGCT +
Preference number: 6 (lower is better)
Translates to: QQWAIGHILAHR*RNVVDLLAILA
Trigger: AGCCAGTATGGCCAGGAGGTCTACGACGTTCCTCCATCGGTGAGCAAGGATGTGCCCGATGGCCCACTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569340.1
ENST00000642792.1
CDS TCA 72 bp GGAGCTGGGTGGCTCCACTTTATCTCCACCGAGGGGTaGCGCCTGGGTTCGTGGAAACCACCAGAGGAAATG +
Preference number: 6 (lower is better)
Translates to: GAGWLHFISTEG*RLGSWKPPEEM
Trigger: CATTTCCTCTGGTGGTTTCCACGAACCCAGGCGTCACCCCTCGGTGGAGATAAAGTGGAGCCACCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS GCA 72 bp TGGGATGTGGCCAGAGTGACATTCCCTAATCACTACTaGCCTGGGATACCGGCCCTCCAGCAGGCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: WDVARVTFPNHY*PGIPALQQAQV
Trigger: CACCTGAGCCTGCTGGAGGGCCGGTATCCCAGGGCAGTAGTGATTAGGGAATGTCACTCTGGCCACATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp CCTGAGTCCTGCTCCAACTCATCTGCTTCAGCGACATaGGGTAGGAGAGCGGCAAGGCACGGACATCTTGGC +
Preference number: 6 (lower is better)
Translates to: PESCSNSSASAT*GRRAARHGHLG
Trigger: GCCAAGATGTCCGTGCCTTGCCGCTCTCCTACCCCATGTCGCTGAAGCAGATGAGTTGGAGCAGGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535626.6
ENST00000647035.1
CDS CCA 72 bp CTGTCCATCTGTCATGTGGGGCCTGCACCTGAGGCCTaGTTACCCGGGGTAGCCAGGATCACTTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: LSICHVGPAPEA*LPGVARITCCS
Trigger: AGAACAGCAAGTGATCCTGGCTACCCCGGGTAACCAGGCCTCAGGTGCAGGCCCCACATGACAGATGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp GCCAGAAAGCCCCCACTGCCTGCTTCACGGAAAGGATaGGGTCCTCCGGGTGAGGAGCAGTTCCAGAAACAA +
Preference number: 6 (lower is better)
Translates to: ARKPPLPASRKG*GPPGEEQFQKQ
Trigger: TTGTTTCTGGAACTGCTCCTCACCCGGAGGACCCCATCCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp TCAAACGGGGACCTCCCCATAGAGGCCCGCCCAGGCTaGGATGTGGCCAGAGTGACATTCCCTAATCACTAC +
Preference number: 6 (lower is better)
Translates to: SNGDLPIEARPG*DVARVTFPNHY
Trigger: GTAGTGATTAGGGAATGTCACTCTGGCCACATCCCAGCCTGGGCGGGCCTCTATGGGGAGGTCCCCGTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp AGACTGGGAATTCGGAGGCCACATGTGGTGCTGCACTaGGGGGCCATGCCAGAAGACGAGGTTCTGGATCCA +
Preference number: 6 (lower is better)
Translates to: RLGIRRPHVVLH*GAMPEDEVLDP
Trigger: TGGATCCAGAACCTCGTCTTCTGGCATGGCCCCCCAGTGCAGCACCACATGTGGCCTCCGAATTCCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS GCA 72 bp CCTGAGGCCTGGTTACCCGGGGTAGCCAGGATCACTTaGTGTTCTCAGGAGGTGAGACTGAGATGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PEAWLPGVARIT*CSQEVRLRCSE
Trigger: CTCTGAGCATCTCAGTCTCACCTCCTGAGAACAGCAAGTGATCCTGGCTACCCCGGGTAACCAGGCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CCA 72 bp GGTGGCTCCACTTTATCTCCACCGAGGGGTGACGCCTaGGTTCGTGGAAACCACCAGAGGAAATGTCACAGG +
Preference number: 6 (lower is better)
Translates to: GGSTLSPPRGDA*VRGNHQRKCHR
Trigger: CCTGTGACATTTCCTCTGGTGGTTTCCACGAACCCAGGCGTCACCCCTCGGTGGAGATAAAGTGGAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542031.6
ENST00000643557.1
CDS CAA 72 bp CAGCAGATGCCAGGAGAGGGCCGCAAAGGCACAGCGTaGGAACCAGAGGGTTCCTACCAAGTTGACAACTCC +
Preference number: 6 (lower is better)
Translates to: QQMPGEGRKGTA*EPEGSYQVDNS
Trigger: GGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTTTGCGGCCCTCTCCTGGCATCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS CAA 90 bp AGGGCCGCAAAGGCACAGCGTTGGAACCAGAGGGTTCCTACCAAGTaGACAACTCCAAAAGAGCATGGTGGTCCCCCAAGGACCAGAGCT +
Preference number: 6 (lower is better)
Translates to: RAAKAQRWNQRVPTK*TTPKEHGGPPRTRA
Trigger: AGCTCTGGTCCTTGGGGGACCACCATGCTCTTTTGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTTTGCGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS TCA 72 bp AGCCCTAGCACACACATCCTTCACAATTCCTATCCATaGCAGCTCTGGGACGAGCCGGCTCTGGAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: SPSTHILHNSYP*QLWDEPALEPG
Trigger: ACCTGGCTCCAGAGCCGGCTCGTCCCAGAGCTGTCATGGATAGGAATTGTGAAGGATGTGTGTGCTAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563038.5
ENST00000642821.1
CDS CCA 72 bp AGCAGATGCCAGGAGAGGGCCGCAAAGGCACAGCGTTaGAACCAGAGGGTTCCTACCAAGTTGACAACTCCA +
Preference number: 6 (lower is better)
Translates to: SRCQERAAKAQR*NQRVPTKLTTP
Trigger: TGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTTTGCGGCCCTCTCCTGGCATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS CAA 90 bp CTAAAGGGACAGCAGATGCCAGGAGAGGGCCGCAAAGGCACAGCGTaGGAACCAGAGGGTTCCTACCAAGTTGACAACTCCAAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: LKGQQMPGEGRKGTA*EPEGSYQVDNSKRA
Trigger: TGCTCTTTTGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTTTGCGGCCCTCTCCTGGCATCTGCTGTCCCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS TCA 72 bp AGGCACAGCGTTGGAACCAGAGGGTTCCTACCAAGTTaGCAACTCCAAAAGAGCATGGTGGTCCCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: RHSVGTRGFLPS*QLQKSMVVPQG
Trigger: TCCTTGGGGGACCACCATGCTCTTTTGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS GCA 72 bp TGCACTCACTCTGGGATAGTTAATGAAGAGGCCACTTaGCAGAAAGCCCCCACTGCCTGCTTCACGGAAAGG +
Preference number: 6 (lower is better)
Translates to: CTHSGIVNEEAT*QKAPTACFTER
Trigger: CCTTTCCGTGAAGCAGGCAGTGGGGGCTTTCTGGCAAGTGGCCTCTTCATTAACTATCCCAGAGTGAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
CDS CAA 72 bp AAGGCACAGCGTTGGAACCAGAGGGTTCCTACCAAGTaGACAACTCCAAAAGAGCATGGTGGTCCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: KAQRWNQRVPTK*TTPKEHGGPPR
Trigger: CCTTGGGGGACCACCATGCTCTTTTGGAGTTGTCAACTTGGTAGGAACCCTCTGGTTCCAACGCTGTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS TCA 72 bp GGGCCATGCCAGAAGACGAGGTTCTGGATCCAATTCTaGGGACAACTGACTGTCTCTCTGTACCTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: GPCQKTRFWIQF*GQLTVSLYLSV
Trigger: GACACTGAGGTACAGAGAGACAGTCAGTTGTCCTCAGAATTGGATCCAGAACCTCGTCTTCTGGCATGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563700.1
ENST00000567215.1
ENST00000643488.1
ENST00000647160.1
CDS GCA 72 bp CAACTGACTGTCTCTCTGTACCTCAGTGTCCCCATCTaGACCATCCGTATAATGGGAAAGGGGTTTGAGGAG +
Preference number: 6 (lower is better)
Translates to: QLTVSLYLSVPI*TIRIMGKGFEE
Trigger: CTCCTCAAACCCCTTTCCCATTATACGGATGGTGCAGATGGGGACACTGAGGTACAGAGAGACAGTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563700.1
ENST00000647160.1
CDS GCA 72 bp GTTCTGTCTTCCTTCTTTCTGAAGACGAGACGATTATaGTCTGAACCAGAACGGATGGCGGGGCTCACATCA +
Preference number: 6 (lower is better)
Translates to: VLSSFFLKTRRL*SEPERMAGLTS
Trigger: TGATGTGAGCCCCGCCATCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000418647.7
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
ENST00000644430.1
CDS TCA 72 bp AAGGGCTTGGCAGGCATGTTCTGTCTTCCTTCTTTCTaGAGACGAGACGATTATGCTCTGAACCAGAACGGA +
Preference number: 6 (lower is better)
Translates to: KGLAGMFCLPSF*RRDDYALNQNG
Trigger: TCCGTTCTGGTTCAGAGCATAATCGTCTCGTCTTCAGAAAGAAGGAAGACAGAACATGCCTGCCAAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000418647.7
ENST00000546196.2
ENST00000562556.5
ENST00000642560.1
ENST00000644039.1
ENST00000644430.1