RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAN (Homo sapiens)

Ensembl gene IDs: ENSG00000132692

Ensembl transcript IDs: ENST00000329117.10, ENST00000361588.5, ENST00000424639.5, ENST00000441358.5, ENST00000457777.6, ENST00000479949.5, ENST00000491823.1, ENST00000496038.1

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATaGCAGGGAAGGGTCACAGATGGTCAGTGGCGGGGCTGGGATCAC +
Preference number: 1 (lower is better)
Translates to: ALWGWRDVSHRWRAQ*QGRVTDGQWRGWDH
Trigger: GTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp GGAAGTGGTGATGCACCAGGCTGCAGGACTGCCCTTGCTGGCGCCTaGGAGAGTGACTCCTCCTGGGCTGCTGGCTCAGTGGGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: GSGDAPGCRTALAGA*ESDSSWAAGSVGRE
Trigger: CTCTCTCCCCACTGAGCCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CCA 90 bp AGGCCTGAGGATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTaGAGGGCCCAATGGCAGGGAAGGGTCACAGATGGTCAGTGGCGG +
Preference number: 1 (lower is better)
Translates to: RPEDALWGWRDVSHR*RAQWQGRVTDGQWR
Trigger: CCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATCCTCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp AGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTTCCT +
Preference number: 1 (lower is better)
Translates to: SGPGHHPRLHTVGPW*QSLHPAPGSTPVLP
Trigger: AGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR CCA 90 bp TGCAGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTT +
Preference number: 1 (lower is better)
Translates to: CSGPGHHPRLHTVGP*WQSLHPAPGSTPVL
Trigger: AAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR GCA 90 bp GCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACCCAGGAACAG +
Preference number: 1 (lower is better)
Translates to: ARGGNLCTPLLAVRP*FLQCQLLWRVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR GCA 90 bp GCCACCATCCCAGGCTGCATACAGTTGGCCCGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTACGCCCGTGCTTCCTCCAATGTCAG +
Preference number: 1 (lower is better)
Translates to: ATIPGCIQLARGGNL*TPLLAVRPCFLQCQ
Trigger: CTGACATTGGAGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR CCA 90 bp TGTGAGCCACAGGTGGAGGGCCCAATGGCAGGGAAGGGTCACAGATaGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGC +
Preference number: 1 (lower is better)
Translates to: CEPQVEGPMAGKGHR*SVAGLGSQGKDAES
Trigger: GCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTGTGGCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTCTCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: AAYSWPVVAISAPRS*QYARASSNVSFSGG
Trigger: CCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR GCA 90 bp CTGGAAGCTTCTGACTCTCCATCAGGAAGTGGTGATGCACCAGGCTaGAGGACTGCCCTTGCTGGCGCCTGGGAGAGTGACTCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: LEASDSPSGSGDAPG*RTALAGAWESDSSW
Trigger: CCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTCCTGATGGAGAGTCAGAAGCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CCA 90 bp AGGGCCCAATGGCAGGGAAGGGTCACAGATGGTCAGTGGCGGGGCTaGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGG +
Preference number: 1 (lower is better)
Translates to: RAQWQGRVTDGQWRG*DHRVKTRRAEIPTR
Trigger: CCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp CACAGGTGGAGGGCCCAATGGCAGGGAAGGGTCACAGATGGTCAGTaGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATA +
Preference number: 1 (lower is better)
Translates to: HRWRAQWQGRVTDGQ*RGWDHRVKTRRAEI
Trigger: TATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp CAGGACCACCAGTTGCCTCCCCCACCTCTCTTGCCTCAACCAGAGTaGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: QDHQLPPPPLLPQPE*KVMGMLGSSPWEWA
Trigger: TGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR TCA 90 bp CTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATaGTGGGGATGGAGTAGATGGCCCCACGGGATTCACTCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: LLGLLEWSFHLLRPP*WGWSRWPHGIHSLW
Trigger: CCACAGAGAGTGAATCCCGTGGGGCCATCTACTCCATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CCA 90 bp AGGTTCCTCTCCCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCATCAGGAAGT +
Preference number: 1 (lower is better)
Translates to: RFLSLGVGRVSVGGP*TLGGLEASDSPSGS
Trigger: ACTTCCTGATGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGGGAGAGGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR TCA 90 bp TGGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTaGGATACCCACAAGGTGGATATCCGAGATTGGAGACCCATAGGT +
Preference number: 1 (lower is better)
Translates to: WSVAGLGSQGKDAES*DTHKVDIRDWRPIG
Trigger: ACCTATGGGTCTCCAATCTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 90 bp GAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTaGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGTG +
Preference number: 1 (lower is better)
Translates to: EPPRYFPEAPSGTVT*TPVPPLVMLSLPVV
Trigger: CACCACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CCA 90 bp GAAGTGGTGATGCACCAGGCTGCAGGACTGCCCTTGCTGGCGCCTGGGAGAGTGCTCCTCCTGGGCTGCTaGCTCAGTGGGGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: EVVMHQAAGLPLLAPGRVLLLGC*LSGERG
Trigger: GCCTCTCTCCCCACTGAGCCAGCAGCCCAGGAGGAG...CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR TCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGGGGGCTGGCGAGATGTaGGCCACAGGTGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRGAGEM*ATGGGP
Trigger: GGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCC...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR TCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCGCTGGCTGGGTGTaGCGATGGGGTAGCGCACAC +
Preference number: 2 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGSAGWV*RWGSAH
Trigger: GTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCT...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTGCCACCATCCCAGGCTaGATACAGTTGGCCCGTGGT +
Preference number: 2 (lower is better)
Translates to: SWPVVAISAPRSWQYARAATIPG*IQLARG
Trigger: ACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR TCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCTGGCGCCTGGGAGAGTaGCTCCTCCTGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVWRLGE*LLLGCW
Trigger: CCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCA...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAGAGCTCGCTGGGCCATaGCCACAGAGCCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGELAGP*PQSLIL
Trigger: GAGGATGAGGCTCTGTGGGCATGGCCCAGCGAGCTC...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCACCCTGGGCTGCAGTaGTCCAGGCCACCATCCCAG +
Preference number: 2 (lower is better)
Translates to: VGEEEESLDTRQAPTTALHPGLQ*SRPPSQ
Trigger: CTGGGATGGTGGCCTGGACCACTGCAGCCCAGGGTG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: AYSWPVVAISAPRSWQYAHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR GCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 2 (lower is better)
Translates to: VGEEEESLDTRQAPTTALLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp GGAAGCCATCCATGTCTCCGTAACAGGCCTCTCGTGGGGTCTGGATGGGATACCTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: GSHPCLRNRPLVGSGWDTSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...GGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCGGTTGGAGGCTGGGTTaGAGGCCTCAGGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRGWRLG*RPQGWQ
Trigger: CTGCCATCCCTGAGGCCTCCAACCCAGCCTCCAACC...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR GCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: AYSWPVVAISAPRSWQYALAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGGGAAGGGTCACAGATaGTCAGTGGCGGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPGKGHR*SVAGLG
Trigger: TCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCC...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: SWPVVAISAPRSWQYARAQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp GGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCC +
Preference number: 2 (lower is better)
Translates to: GSGQSLSRWSMDPWRPGSHTVGP*WQSLHP
Trigger: GGGGTGCAGAGATTGCCACCACGGGCCAACTGTATG...GCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTGTTGTCACTTCCTGTaGTGGCGGGAGCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTCCHFL*WRERRV
Trigger: CACCCTGCGCTCCCGCCACCACAGGAAGTGACAACA...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCGGTCAGTGGCGGGGCTaGGATCACAGGGTAAAGACG +
Preference number: 2 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGGQWRG*DHRVKT
Trigger: CGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACC...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGGATGTGAGCCACAGGTaGAGGGCCCAATGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRDVSHR*RAQWQG
Trigger: TCCCTGCCATTGGGCCCTCCACCTGTGGCTCACATC...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGGATGCTCTGTGGGGCTaGCGAGATGTGAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRDALWG*RDVSHR
Trigger: CCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: AYSWPVVAISAPRSWQYAQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp GTGGGCGGTACCATGGATTGTGTTTCAAATTCTAGGAGCGTCCTAGGGGCCTCTCCCCCACCACAGCGCTaGCTGGGTGTGACGATGGGG +
Preference number: 2 (lower is better)
Translates to: VGGTMDCVSNSRSVLGASPPPQR*LGVTMG
Trigger: CCCCATCGTCACACCCAGCCAGCGCTGTGGTGGGGG...AGAGGCCCCTAGGACGCTCCTAGAATTTGAAACACAATCCATGGTACCGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CAA 90 bp TGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGACTCCGGAGGTaGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGG +
Preference number: 2 (lower is better)
Translates to: CLRLCGGTGSPGLRR*RGEKGLPGFPEINR
Trigger: CCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR TCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGAGGGAAAATTTGGGTaGCAGGGCAGTGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTEGKFG*QGSAVA
Trigger: GGCCACAGCACTGCCCTGTCACCCAAATTTTCCCTC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR TCA 90 bp AGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: RSVLGASAGSSGVELPPPGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...AGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCACGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 2 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 2 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGGTGATGAGGACCCTTaGAGAGGCCTGAGGATGCTC +
Preference number: 2 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPGDEDP*RGLRML
Trigger: GAGCATCCTCAGGCCTCTCCAAGGGTCCTCATCACC...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp GTGGGCGGTACCATGGATTGTGTTTCAAATTCTAGGAGCGTCCTAGGGGCCTCTTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: VGGTMDCVSNSRSVLGASSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...AGAGGCCCCTAGGACGCTCCTAGAATTTGAAACACAATCCATGGTACCGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTTGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 2 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp TCTCTTGCCTCAACCAGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: SLASTRVEGDGDARFLSLGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...CAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCTGGTTGAGGCAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR TCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCACTTACCTTCCTCTTCTaGGAACCCCGTGGGCGGTAC +
Preference number: 2 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPLTFLF*EPRGRY
Trigger: GTACCGCCCACGGGGTTCTCAGAAGAGGAAGGTAAG...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGACGTTGAAGCGGCTGTaGTTATTGGGGAAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMTLKRL*LLGKPV
Trigger: GACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGT...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp TCCAGGGTCTCTGTCACTGTGACGATAGCCTCTAGTCCATCAGAGGCTGGGTTGACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 2 (lower is better)
Translates to: SRVSVTVTIASSPSEAGLTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...CAACCCAGCCTCTGATGGACTAGAGGCTATCGTCACAGTGACAGAGACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTTGGGGAAGCCAGTCTaGTTGGGGAAGAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRLGKPV*LGKRKR
Trigger: TCTCTTCCTCTTCCCCAACCAGACTGGCTTCCCCAA...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVSVGGP*TLGGLE
Trigger: TTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGA...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR GCA 90 bp CATAACAGTACACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACGATGTGGGCTCCAATaGGGGCACAGGCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HNSTHHRGHPGPPHHSSGRCGLQ*GHRPPG
Trigger: CCCAGGAGGCCTGTGCCCGCATTGGAGCCCACATCG...TCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTGTACTGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCAGGGATTCACTCTCTGTaGCTTCCTGAGGCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPGIHSL*LPEAAA
Trigger: TGCAGCTGCCTCAGGAAGCCACAGAGAGTGAATCCC...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCACTTCTGAGAACCCCGTaGGCGGTACCATGGATTGTG +
Preference number: 2 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPLLRTP*AVPWIV
Trigger: CACAATCCATGGTACCGCCCACGGGGTTCTCAGAAG...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR TCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAAAGACGCGGAGAGCTaGGATACCCACAAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPKDAES*DTHKVD
Trigger: ATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTT...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR GCA 90 bp GTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: VSEAVDVEAAVLIGEASLLAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...CAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp TCTCTTGCCTCAACCAGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGCAGAGTCTCAGTAGGTaGTCCATGGACCCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SLASTRVEGDGDARFLSLQSLSR*SMDPWR
Trigger: CCTCCAAGGGTCCATGGACCACCTACTGAGACTCTG...CAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCTGGTTGAGGCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR-3UTR CCA 90 bp GTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGCTCGTGGGGTCTGGATaGGATACCTCACGGTCTGAT +
Preference number: 2 (lower is better)
Translates to: VSEAVDVEAAVLIGEASLLVGSG*DTSRSD
Trigger: ATCAGACCGTGAGGTATCCCATCCAGACCCCACGAG...CAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR TCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGCAGGAGAGTTTGGGATaGTGGTGGGTTAAAGGACTA +
Preference number: 2 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRQESLG*WWVKGL
Trigger: TAGTCCTTTAACCCACCATCATCCCAAACTCTCCTG...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR TCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CCA 90 bp ATACTTCACAGAAGTAGTTGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGACCTGAGGATGCTCTGTaGGGCTGGCGAGATGTGAGC +
Preference number: 2 (lower is better)
Translates to: ILHRSSCLRLCGGTGSPGPEDAL*GWRDVS
Trigger: GCTCACATCTCGCCAGCCCCACAGAGCATCCTCAGG...TCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCAACTACTTCTGTGAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCATCCGGGGTGGCGATGTaGGCTCCAATGCGGGCACAG +
Preference number: 2 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPSGVAM*APMRAQ
Trigger: CTGTGCCCGCATTGGAGCCCACATCGCCACCCCGGA...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACATCAGGAACTGTCACCTaGACTCCAGTACCACCCCTC +
Preference number: 2 (lower is better)
Translates to: LENPERVGTVLPRGIEGTSGTVT*TPVPPL
Trigger: GAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCTGA...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGGTGGATATCCGAGATTaGAGACCCATAGGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPVDIRD*RPIGRG
Trigger: ACCTCTACCTATGGGTCTCCAATCTCGGATATCCAC...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCGAGATACCCACAAGGTaGATATCCGAGATTGGAGAC +
Preference number: 2 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSEIPTR*ISEIGD
Trigger: GTCTCCAATCTCGGATATCCACCTTGTGGGTATCTC...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR-3UTR GCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCACGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 2 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGACAGGGCAGTGCTGTaGCCGGCAGTGTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: LILQTLHPASPFPWKTQKDRAVL*PAVFKA
Trigger: GGCCTTGAACACTGCCGGCCACAGCACTGCCCTGTC...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCAACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 2 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CCA 90 bp CATAACAGTACACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGAGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCT +
Preference number: 2 (lower is better)
Translates to: HNSTHHRGHPGPPHHSSGVTGLS*GLDGIP
Trigger: AGGTATCCCATCCAGACCCCACGAGAGGCCTGTTAC...TCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTGTACTGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR GCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAATGGGTGACAGGGCAGTaGTGTGGCCGGCAGTGTTCA +
Preference number: 2 (lower is better)
Translates to: LILQTLHPASPFPWKTQKWVTGQ*CGRQCS
Trigger: TGAACACTGCCGGCCACAGCACTGCCCTGTCACCCA...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCCGTGGGCGGTACCATaGATTGTGTTTCAAATTCTA +
Preference number: 2 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASPWAVP*IVFQIL
Trigger: TAGAATTTGAAACACAATCCATGGTACCGCCCACGG...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CAA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTaGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATA +
Preference number: 2 (lower is better)
Translates to: FPVDFTDTPSCKPIP*ENPERVGTVLPRGI
Trigger: TATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR CCA 72 bp GGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCC +
Preference number: 3 (lower is better)
Translates to: GHHPRLHTVGPW*QSLHPAPGSTP
Trigger: GGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR CCA 72 bp GATGCACCAGGCTGCAGGACTGCCCTTGCTGGCGCCTaGGAGAGTGACTCCTCCTGGGCTGCTGGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: DAPGCRTALAGA*ESDSSWAAGSV
Trigger: CACTGAGCCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CCA 72 bp CCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACG +
Preference number: 3 (lower is better)
Translates to: PGHHPRLHTVGP*WQSLHPAPGST
Trigger: CGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR TCA 72 bp GGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTaGCAGGGCAGTGCTGTGGCCGGCAGTGTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: GGGSAGCEGKFG*QGSAVAGSVQG
Trigger: GCCTTGAACACTGCCGGCCACAGCACTGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR TCA 72 bp TCTGTGGGGGTACGGGTTCTCCTGGACTCCGGAGGTTaGGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: SVGVRVLLDSGG*GVRRDSQASLR
Trigger: TCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGGAGAACCCGTACCCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR GCA 72 bp GGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACC +
Preference number: 3 (lower is better)
Translates to: GNLCTPLLAVRP*FLQCQLLWRVT
Trigger: GGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR CCA 72 bp AGGGCCCAATGGCAGGGAAGGGTCACAGATGGTCAGTaGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGA +
Preference number: 3 (lower is better)
Translates to: RAQWQGRVTDGQ*RGWDHRVKTRR
Trigger: TCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 72 bp CAGGTGGAGGGCCCAATGGCAGGGAAGGGTCACAGATaGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGAC +
Preference number: 3 (lower is better)
Translates to: QVEGPMAGKGHR*SVAGLGSQGKD
Trigger: GTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 72 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTaGAGGGCCCAATGGCAGGGAAGGGTCACAGATGGT +
Preference number: 3 (lower is better)
Translates to: DALWGWRDVSHR*RAQWQGRVTDG
Trigger: ACCATCTGTGACCCTTCCCTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 72 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: SWPVVAISAPRS*QYARASSNVSF
Trigger: GAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR-3UTR CAA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCCACCCCTCGTCATGTaGTCACTTCCTGTGGTGGCG +
Preference number: 3 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTPPLVM*SLPVVA
Trigger: CGCCACCACAGGAAGTGACAACATGACGAGGGGTGG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR CCA 72 bp TGGCAGGGAAGGGTCACAGATGGTCAGTGGCGGGGCTaGGATCACAGGGTAAAGACGCGGAGAGCTGAGATA +
Preference number: 3 (lower is better)
Translates to: WQGRVTDGQWRG*DHRVKTRRAEI
Trigger: TATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 72 bp TCCCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCA +
Preference number: 3 (lower is better)
Translates to: SLGVGRVSVGGP*TLGGLEASDSP
Trigger: TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR CCA 72 bp GGGGAAGCCATCCATGTCTCCGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCTCACGGTCTGATCCGA +
Preference number: 3 (lower is better)
Translates to: GEAIHVSVTGLS*GLDGIPHGLIR
Trigger: TCGGATCAGACCGTGAGGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CAA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGAAGCGGCTGTGCTTATaGGGGAAGCCAGTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMKRLCL*GKPVWL
Trigger: CAACCAGACTGGCTTCCCCAATAAGCACAGCCGCTT...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
3UTR TCA 72 bp CAGAAGGCTGGGCCGAGTCTCGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGGT +
Preference number: 3 (lower is better)
Translates to: QKAGPSLGSSRR*SGCAYWGSQSG
Trigger: ACCAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCGGCCCAGCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
3UTR TCA 72 bp GCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTaGGATACCCACAAGGTGGATATCCGAGATTGGAGA +
Preference number: 3 (lower is better)
Translates to: AGLGSQGKDAES*DTHKVDIRDWR
Trigger: TCTCCAATCTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CCA 72 bp AGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTaGACTCCAGTACCACCCCTCGTCATGTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: RYFPEAPSGTVT*TPVPPLVMLSL
Trigger: AAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR-3UTR CAA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCACCAGGCTGCATACAGTaGGCCCGTGGTGGCAATCTC +
Preference number: 3 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPPGCIQ*ARGGNL
Trigger: GAGATTGCCACCACGGGCCAACTGTATGCAGCCTGG...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
3UTR-3UTR CAA 90 bp CATAACAGTACACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCAGCCAGCATCACATaGCTCATAGCCCCCAAGGTA +
Preference number: 3 (lower is better)
Translates to: HNSTHHRGHPGPPHHSSGPASIT*LIAPKV
Trigger: TACCTTGGGGGCTATGAGCAATGTGATGCTGGCTGG...TCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTGTACTGTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR TCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACCGTGGCAAGGGATGGTaGGGGCGCCGCCGAGCACGC +
Preference number: 4 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYRGKGW*GRRRAR
Trigger: GCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCACG...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp CCTGGGCTGCAGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGAGCGCTGGCTGGGTGTaGCGATGGGGTAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: PGLQWSRPPSQAAYSWPVSAGWV*RWGSAH
Trigger: GTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCT...CACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACTGCAGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR TCA 90 bp CTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCTGGCGCCTGGGAGAGTaGCTCCTCCTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGASAGSSGVELPPPPSSWRLGE*LLLGCW
Trigger: CCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCA...GGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCGGGGCTGGCGAGATGTaGGCCACAGGTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GQWRGWDHRVKTRRAEIPGAGEM*ATGGGP
Trigger: GGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCC...GGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp AGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTGCGCGTCGCCCGCGATaGGCACGCGAAAAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: RSVLGASAGSSGVELPPPARRPR*AREKRG
Trigger: ACCGCGCTTTTCGCGTGCGCATCGCGGGCGACGCGC...AGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp TGGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACCCAGGGAGCACGCCCTGCAGTaGCGCGTCGCCCGCGATGCG +
Preference number: 4 (lower is better)
Translates to: WQYARASSNVSFSGGSPREHALQ*RVARDA
Trigger: CGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTC...CCTGGGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGGCCTCGTTCACCTTaGCGCGCACTCCCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGRPRSP*RALPAP
Trigger: TGGCGCGGGGAGTGCGCGTCAAGGTGAACGAGGCCT...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCTGGGTACGCAGGCAGTaGCACGCGGAACCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AYSWPVVAISAPRSWQYAWVRRQ*HAEPVG
Trigger: GCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCA...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAGCACGCCCTGCAGTaGCGCGTCGCCCGCGATGCG +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPEHALQ*RVARDA
Trigger: CGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTC...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCCCGGCGGCTCGGCGGTaGCCGCAGGTAGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGPAARR*PQVVDV
Trigger: CACGTCCACTACCTGCGGCCACCGCCGAGCCGCCGG...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGCACCCTGGGCTGCAGTaGTCCAGGCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQHPGLQ*SRPPSQ
Trigger: CTGGGATGGTGGCCTGGACCACTGCAGCCCAGGGTG...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGGTGGGCAGCACTGGCTaGGCCTGCACTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQVGSTG*ACTEVP
Trigger: AGGGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCAC...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCACAGGGGCAGCTCCGGTaGCGGCCCACAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAQGQLR*RPTGHQ
Trigger: CTGGTGTCCTGTGGGCCGCCACCGGAGCTGCCCCTG...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR CAA 72 bp CAGGAAGTGGTGATGCACCAGGCTGCAGGACTGCCCTaGCTGGCGCCTGGGAGAGTGACTCCTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QEVVMHQAAGLP*LAPGRVTPPGL
Trigger: CAGCCCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCGAGACTGCGCGAGCGTaGGGAGAGGCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVETARA*GEAGAA
Trigger: TGCGGCCCCAGCCTCTCCTCACGCTCGCGCAGTCTC...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGCGTGGCAAGGGATGGTaGGGGCGCCGCCGAGCACGC +
Preference number: 4 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPRGKGW*GRRRAR
Trigger: GCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCACG...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCACCAGGGAGACGTCGGTaGGCGACGCTGGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAPGRRR*ATLGTQ
Trigger: CTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGG...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCCAGGGAGACGTCGGTaGGCGACGCTGGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: VGEEEESLDTRQAPTTALPGRRR*ATLGTQ
Trigger: CTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGCTGGACTCCGGAGGTTaGGGGGTGAGAAGGGACTCC +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQLDSGG*GVRRDS
Trigger: GGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAG...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCAGGGGTCTCCTCCGGGTaGACGGCTCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAGVSSG*TAQSCS
Trigger: GCTGCAGGACTGAGCCGTGCACCCGGAGGAGACCCC...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGGCGCGTCGCCCGCGATaGGCACGCGAAAAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRARRPR*AREKRG
Trigger: ACCGCGCTTTTCGCGTGCGCATCGCGGGCGACGCGC...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCACCGGCGGCTCGGCGGTaGCCGCAGGTAGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPPAARR*PQVVDV
Trigger: CACGTCCACTACCTGCGGCCACCGCCGAGCCGCCGG...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACCACCCTGGGCTGCAGTaGTCCAGGCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYHPGLQ*SRPPSQ
Trigger: CTGGGATGGTGGCCTGGACCACTGCAGCCCAGGGTG...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp TGGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACCCAGGCCCCCACCACAGCGCTaGCTGGGTGTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: WQYARASSNVSFSGGSPRPPPQR*LGVTMG
Trigger: CCCCATCGTCACACCCAGCCAGCGCTGTGGTGGGGG...CCTGGGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGTGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CAA 72 bp CTCTGTGGGGGTACGGGTTCTCCTGGACTCCGGAGGTaGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LCGGTGSPGLRR*RGEKGLPGFPE
Trigger: CTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGGAGAACCCGTACCCCCACAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGCCTCGTTCACCTTaGCGCGCACTCCCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHRPRSP*RALPAP
Trigger: TGGCGCGGGGAGTGCGCGTCAAGGTGAACGAGGCCT...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTCCAGGGAGACGTCGGTaGGCGACGCTGGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPPGRRR*ATLGTQ
Trigger: CTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGG...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGAGCGCTGGCTGGGTGTaGCGATGGGGTAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMSAGWV*RWGSAH
Trigger: GTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCT...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCGGGGTCTCCTCCGGGTaGACGGCTCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVGVSSG*TAQSCS
Trigger: GCTGCAGGACTGAGCCGTGCACCCGGAGGAGACCCC...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp CTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCCGCTGCTGTCATCGATaGCGTGCTGGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LGASAGSSGVELPPPPSSRCCHR*RAGPHS
Trigger: GCTGTGAGGTCCAGCACGGCATCGATGACAGCAGCG...GGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGCCTCCACAGCGTCGCTaGTGTCATCGATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQPPQRR*CHRCRA
Trigger: AGCACGGCATCGATGACAGCAGCGACGCTGTGGAGG...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp TGGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACCCAGGCGATGTGGGCTCCAATaGGGGCACAGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WQYARASSNVSFSGGSPRRCGLQ*GHRPPG
Trigger: CCCAGGAGGCCTGTGCCCGCATTGGAGCCCACATCG...CCTGGGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGAGCTCGCTGGGCCATaGCCACAGAGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYELAGP*PQSLIL
Trigger: GAGGATGAGGCTCTGTGGGCATGGCCCAGCGAGCTC...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCTCAGGACCACCAGTTaGCTCCCCCACCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AYSWPVVAISAPRSWQYALRTTS*LPHLSC
Trigger: GCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAG...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGACCCAGGGCTGGGGTTaGGTCGCGGCACTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMTQGWG*VAALRS
Trigger: ACTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGT...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCAGGCTACCCAGGGCTaGGGTTGGGTCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTQATQG*GWVAAL
Trigger: CAGTGCCGCGACCCAACCCCAGCCCTGGGTAGCCTG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAGTCGGTGAGCGACGCTaGGTACGCAGGCAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTVGERR*VRRQCH
Trigger: GTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGAC...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GAAGTGGTGATGCACCAGGCTGCAGGACTGCCCTTGCTGGCGCCTGGGAGAGTGACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: EVVMHQAAGLPLLAPGRVTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: SWPVVAISAPRSWQYARAHTVGP*WQSLHP
Trigger: GGGGTGCAGAGATTGCCACCACGGGCCAACTGTATG...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp AGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTTGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: RSVLGASAGSSGVELPPPWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...AGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp CCTGGACTCCGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGLRRLRGEKGLPGFPEIGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...GATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp CACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGTGGCGGGGCCCTTGCTGGCGCCTaGGAGAGTGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLDSSTTPRHVVTSCGGGALAGA*ESDSSW
Trigger: CCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGC...CCCGCCACCACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCACCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAPLHLG*RCQWAA
Trigger: TGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGG...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGGATGTGAGCCACAGGTaGAGGGCCCAATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQDVSHR*RAQWQG
Trigger: TCCCTGCCATTGGGCCCTCCACCTGTGGCTCACATC...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CCAGGGAGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATGGCGCCTGGGAGAGTaGCTCCTCCTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGQLRHLGIYSGPDGRWRLGE*LLLGCW
Trigger: CCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCA...TCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp CCTGGACTCCGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCTTGGGCAGAATTACCTaGTGCGGGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGLRRLRGEKGLPGFPEILGRIT*CGDHGH
Trigger: GTGGCCGTGGTCCCCGCATCAGGTAATTCTGCCCAA...GATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAGTTGGGTCGCGGCACTaGGAAGTTTGTCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGVGSRH*EVCRLL
Trigger: GAGGAGGCGACAAACTTCGCAGTGCCGCGACCCAAC...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTGGGTACGCAGGCAGTaGCACGCGGAACCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTWVRRQ*HAEPVG
Trigger: GCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCA...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGGAGGTGGGTACGCAGGCAGTaGCACGCGGAACCGGTAGGC +
Preference number: 4 (lower is better)
Translates to: RRLRGEKGLPGFPEINRRWVRRQ*HAEPVG
Trigger: GCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCA...CCTCCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGACCTCCACAGCGTCGCTaGTGTCATCGATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGPPQRR*CHRCRA
Trigger: AGCACGGCATCGATGACAGCAGCGACGCTGTGGAGG...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTCGATGTGGGCTCCAATaGGGGCACAGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPRCGLQ*GHRPPG
Trigger: CCCAGGAGGCCTGTGCCCGCATTGGAGCCCACATCG...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp TGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGCTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: WRGWDHRVKTRRAEIPTRLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...CCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTTCCGGGGTGGCGATGTaGGCTCCAATGCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPSGVAM*APMRAQ
Trigger: CTGTGCCCGCATTGGAGCCCACATCGCCACCCCGGA...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCAGAGCTGCTCCGGGGTaGCGATGTGGGCTCCAATGC +
Preference number: 4 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRRAAPG*RCGLQC
Trigger: GCATTGGAGCCCACATCGCCACCCCGGAGCAGCTCT...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTCTCGTGGGGTCTGGATaGGATACCTCACGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: SWPVVAISAPRSWQYARALVGSG*DTSRSD
Trigger: ATCAGACCGTGAGGTATCCCATCCAGACCCCACGAG...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp CCTGGGCTGCAGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCT +
Preference number: 4 (lower is better)
Translates to: PGLQWSRPPSQAAYSWPVVTGLS*GLDGIP
Trigger: AGGTATCCCATCCAGACCCCACGAGAGGCCTGTTAC...CACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACTGCAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GCCATCCATGTCTCCGTAACAGGCCTCTCGTGGGGTCTGGATGGGATACCTCACTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AIHVSVTGLSWGLDGIPHSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...GTGAGGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: AYSWPVVAISAPRSWQYAHTVGP*WQSLHP
Trigger: GGGGTGCAGAGATTGCCACCACGGGCCAACTGTATG...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCCCCACCACAGCGCTaGCTGGGTGTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSPPPQR*LGVTMG
Trigger: CCCCATCGTCACACCCAGCCAGCGCTGTGGTGGGGG...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACCTCCTCCTGGGCTGCTaGCTCAGTGGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHLLLGC*LSGERG
Trigger: GCCTCTCTCCCCACTGAGCCAGCAGCCCAGGAGGAG...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCGCCCTTGCTGGCGCCTaGGAGAGTGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVALAGA*ESDSSW
Trigger: CCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGC...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGCTAGGTTCCTCTCCCTaGGAGTGGGCAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQLGSSP*EWAESQ
Trigger: CTGAGACTCTGCCCACTCCCAGGGAGAGGAACCTAG...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACCCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHPLHLG*RCQWAA
Trigger: TGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGG...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGGGGTACGGGTTCTCCTaGACTCCGGAGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRGWDHRVKTRRAEIPTRGYGFS*TPEVEG
Trigger: CCCCTCAACCTCCGGAGTCCAGGAGAACCCGTACCC...CCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACACGTGGCAAGGGATGGTaGGGGCGCCGCCGAGCACGC +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTRGKGW*GRRRAR
Trigger: GCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCACG...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAACAGGAAAGTCCACTTaGCCCGCGGAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTTGKST*PAESPA
Trigger: TGCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGT...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAGGATACCTCACGGTCTaGTCCGACAGCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTGYLTV*SDSQPA
Trigger: TGCTGGCTGGCTGTCGGATCAGACCGTGAGGTATCC...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCAGCGCTGGCTGGGTGTaGCGATGGGGTAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSSAGWV*RWGSAH
Trigger: GTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCT...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCCTTACCTTCCTCTTCTaGGAACCCCGTGGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GQWRGWDHRVKTRRAEIPLTFLF*EPRGRY
Trigger: GTACCGCCCACGGGGTTCTCAGAAGAGGAAGGTAAG...GGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGAGGAACAGCTGGGCCATaGTGCAGGCTACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRGTAGP*CRLPRA
Trigger: AGCCCTGGGTAGCCTGCAGCATGGCCCAGCTGTTCC...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGGGAACAGCTGGGCCATaGTGCAGGCTACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRGTAGP*CRLPRA
Trigger: AGCCCTGGGTAGCCTGCAGCATGGCCCAGCTGTTCC...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACACGCTGCTGTCATCGATaGCGTGCTGGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTRCCHR*RAGPHS
Trigger: GCTGTGAGGTCCAGCACGGCATCGATGACAGCAGCG...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGCGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp CACACCATAGTTCCGGACCCCGGGGAAGCCATCCATGTCTCCGTAACAGGCCTCCGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: HTIVPDPGEAIHVSVTGLRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...GAGGCCTGTTACGGAGACATGGATGGCTTCCCCGGGGTCCGGAACTATGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGAGCTCGCTGGGCCATaGCCACAGAGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTELAGP*PQSLIL
Trigger: GAGGATGAGGCTCTGTGGGCATGGCCCAGCGAGCTC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACACTCAGGACCACCAGTTaGCTCCCCCACCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTLRTTS*LPHLSC
Trigger: GCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAG...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGGATCAGCGGCAGATTaGGCTGGGCCAGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTGSAAD*AGPVLP
Trigger: GGGAAGGACTGGCCCAGCGCAATCTGCCGCTGATCC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGACCCAGGGCTGGGGTTaGGTCGCGGCACTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRTQGWG*VAALRS
Trigger: ACTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGT...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGATTGGAGACCCATAGGCAGGCTACCCAGGGCTaGGGTTGGGTCGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: RGELRYPQGGYPRLETHRQATQG*GWVAAL
Trigger: CAGTGCCGCGACCCAACCCCAGCCCTGGGTAGCCTG...CCTATGGGTCTCCAATCTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCAGTCGGTGAGCGACGCTaGGTACGCAGGCAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPVGERR*VRRQCH
Trigger: GTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGAC...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGAAGAGCTGCTCCGGGGTaGCGATGTGGGCTCCAATGC +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRRAAPG*RCGLQC
Trigger: GCATTGGAGCCCACATCGCCACCCCGGAGCAGCTCT...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTTTGGGGAAGCCAGTCTaGTTGGGGAAGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SWPVVAISAPRSWQYARALGKPV*LGKRKR
Trigger: TCTCTTCCTCTTCCCCAACCAGACTGGCTTCCCCAA...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCGGTTGGAGGCTGGGTTaGAGGCCTCAGGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGGWRLG*RPQGWQ
Trigger: CTGCCATCCCTGAGGCCTCCAACCCAGCCTCCAACC...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCCCGGGGAAGGTTGGAGGCTGGGTTaGAGGCCTCAGGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: HIIEVIRVHHTIVPDPGEGWRLG*RPQGWQ
Trigger: CTGCCATCCCTGAGGCCTCCAACCCAGCCTCCAACC...TTCCCCGGGGTCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GGAAGCCATCCATGTCTCCGTAACAGGCCTCTCGTGGGGTCTGGATGGGATACCGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSHPCLRNRPLVGSGWDTGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...GGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp TCGTGGGGTCTGGATGGGATACCTCACGGTCTGATCCGACAGCCAGCCAGCATCCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SWGLDGIPHGLIRQPASIHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...GATGCTGGCTGGCTGTCGGATCAGACCGTGAGGTATCCCATCCAGACCCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGCTTCTGAGAACCCCGTaGGCGGTACCATGGATTGTG +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQLLRTP*AVPWIV
Trigger: CACAATCCATGGTACCGCCCACGGGGTTCTCAGAAG...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GAAGTGGTGATGCACCAGGCTGCAGGACTGCCCTTGCTGGCGCCTGGGAGAGTGGGACCCTTGGAGGCCTaGAAGCTTCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVVMHQAAGLPLLAPGRVGPLEA*KLLTLH
Trigger: ATGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCC...CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGCCTGGTGCATCACCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp CTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGASAGSSGVELPPPPSSSVGGP*TLGGLE
Trigger: TTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGA...GGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACCTAGGTTCCTCTCCCTaGGAGTGGGCAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYLGSSP*EWAESQ
Trigger: CTGAGACTCTGCCCACTCCCAGGGAGAGGAACCTAG...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGGGCCTGGGCTGGGCTaGAGCCTCCTAGGTATTTCC +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTGPGLG*SLLGIS
Trigger: GGAAATACCTAGGAGGCTCCAGCCCAGCCCAGGCCC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGCCTGAGGATGCTCTGTaGGGCTGGCGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: WRGWDHRVKTRRAEIPTRPEDAL*GWRDVS
Trigger: GCTCACATCTCGCCAGCCCCACAGAGCATCCTCAGG...CCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp TGGCAGTACGCCCGTGCTTCCTCCAATGTCAGCTTCTCTGGAGGGTCACCCAGGACAGCGATAGATACCTaGGTCGTTGGGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WQYARASSNVSFSGGSPRTAIDT*VVGAQL
Trigger: GAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGT...CCTGGGTGACCCTCCAGAGAAGCTGACATTGGAGGAAGCACGGGCGTACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp TGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGCTCCTCCGTCCTCCATaGTGGGGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: WRGWDHRVKTRRAEIPTRLLRPP*WGWSRW
Trigger: CCATCTACTCCATCCCCATCATGGAGGACGGAGGAG...CCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGTGGCGCCTGGGAGAGTaGCTCCTCCTGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEWRLGE*LLLGCW
Trigger: CCAGCAGCCCAGGAGGAGTCACTCTCCCAGGCGCCA...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CCTGGGAGTGGGCAGAGTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGGCCTGGAAGCTTCTaGCTCTCCATCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PGSGQSLSRWSMDPWRPGRPGSF*LSIRKW
Trigger: CCACTTCCTGATGGAGAGTCAGAAGCTTCCAGGCCT...TCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGACTCTGCCCACTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGGATAGAGAGGGCAGTTaGGCCTTGGGCAGAATTACC +
Preference number: 4 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQDREGS*ALGRIT
Trigger: GGTAATTCTGCCCAAGGCTCAACTGCCCTCTCTATC...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGGACTACAGGTCAGGTaGCCCAGAGCTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EKGLPGFPEINRRQLKGTGLQVR*PRAAGG
Trigger: TCCCCCTGCAGCTCTGGGTCACCTGACCTGTAGTCC...CGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGACCCTTGGAGAGGCCTaGGGATGCTCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPTLGEA*GCSVGL
Trigger: CAGCCCCACAGAGCATCCTCAGGCCTCTCCAAGGGT...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCAGGAACAGCTGGGCCATaGTGCAGGCTACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPGTAGP*CRLPRA
Trigger: AGCCCTGGGTAGCCTGCAGCATGGCCCAGCTGTTCC...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCGCTGCTGTCATCGATaGCGTGCTGGACCTCACAGC +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTRCCHR*RAGPHS
Trigger: GCTGTGAGGTCCAGCACGGCATCGATGACAGCAGCG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGACCTCCACAGCGTCGCTaGTGTCATCGATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRPPQRR*CHRCRA
Trigger: AGCACGGCATCGATGACAGCAGCGACGCTGTGGAGG...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp GGAAGCCATCCATGTCTCCGTAACAGGCCTCTCGTGGGGTCTGGATGGGATACCCCTCCACAGCGTCGCTaGTGTCATCGATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GSHPCLRNRPLVGSGWDTPPQRR*CHRCRA
Trigger: AGCACGGCATCGATGACAGCAGCGACGCTGTGGAGG...GGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp CCTGGACTCCGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGLRRLRGEKGLPGFPEILAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...GATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RRLRGEKGLPGFPEINRRRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...CCTCCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCACGTTGAAGCGGCTGTaGTTATTGGGGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AYSWPVVAISAPRSWQYATLKRL*LLGKPV
Trigger: GACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGT...GGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR GCA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCCTCCCCCACCTCTCTTaGCTCAACCAGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRLPHLS*LNQSGR
Trigger: CCTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAG...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGACTCAGGACCACCAGTTaGCTCCCCCACCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRLRTTS*LPHLSC
Trigger: GCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAG...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCAGATACCTGAGTCGTTaGGGCGCAGCTCGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGRYLSR*GAARSA
Trigger: CGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCT...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTTCCGGGGTGGCGATGTaGGCTCCAATGCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASSGVAM*APMRAQ
Trigger: CTGTGCCCGCATTGGAGCCCACATCGCCACCCCGGA...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCGCCTCTCGTGGGGTCTaGATGGGATACCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGASRGV*MGYLTV
Trigger: GACCGTGAGGTATCCCATCCAGACCCCACGAGAGGC...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTTCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TCAAATTCTAGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCACCCTGGGCTGCAGTaGTCCAGGCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SNSRSVLGASAGSSGVELHPGLQ*SRPPSQ
Trigger: CTGGGATGGTGGCCTGGACCACTGCAGCCCAGGGTG...AAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCTAGAATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGGGTTGGAGGCTGGGTTaGAGGCCTCAGGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRGWRLG*RPQGWQ
Trigger: CTGCCATCCCTGAGGCCTCCAACCCAGCCTCCAACC...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGGGCTGGGTTGGAGGCTaGGTTGGAGGCCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRGWVGG*VGGLRD
Trigger: ATCCCTGAGGCCTCCAACCCAGCCTCCAACCCAGCC...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCATCAGAGGCTGGGTTaGAGGCTGGGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRLRGEKGLPGFPEINRRHQRLG*RLGWRP
Trigger: AGGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATG...CCTCCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TCTCTTGCCTCAACCAGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGCTCCTCCTGGGCTGCTaGCTCAGTGGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLASTRVEGDGDARFLSLLLLGC*LSGERG
Trigger: GCCTCTCTCCCCACTGAGCCAGCAGCCCAGGAGGAG...CAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCTGGTTGAGGCAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGCCTCAGGGGCCCGTGTaGCTGGAAGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEPQGPV*LEAGKG
Trigger: CCCCTTCCCTGCTTCCAGCCACACGGGCCCCTGAGG...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCTCGGGCAGGTCTTCTaGGCACACAGGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTLGQVF*AHRRSG
Trigger: CCCAGATCTCCTGTGTGCCCAGAAGACCTGCCCGAG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACGGTCAGTGGCGGGGCTaGGATCACAGGGTAAAGACG +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHGQWRG*DHRVKT
Trigger: CGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACC...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCGGGAAGGGTCACAGATaGTCAGTGGCGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSGKGHR*SVAGLG
Trigger: TCCCAGCCCCGCCACTGACCATCTGTGACCCTTCCC...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CAA 72 bp CCTCACGGTCTGATCCGACAGCCAGCCAGCATCACATaGCTCATAGCCCCCAAGGTAGGCGGCATAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PHGLIRQPASIT*LIAPKVGGIEL
Trigger: CAGCTCTATGCCGCCTACCTTGGGGGCTATGAGCAATGTGATGCTGGCTGGCTGTCGGATCAGACCGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR TCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGACAGCGATAGATACCTaGGTCGTTGGGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRTAIDT*VVGAQL
Trigger: GAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGT...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGGGATACCTCACGGTCTaGTCCGACAGCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRGYLTV*SDSQPA
Trigger: TGCTGGCTGGCTGTCGGATCAGACCGTGAGGTATCC...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCCTTACCTTCCTCTTCTaGGAACCCCGTGGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVLTFLF*EPRGRY
Trigger: GTACCGCCCACGGGGTTCTCAGAAGAGGAAGGTAAG...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGCCTGGAAGCTTCTaGCTCTCCATCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTRPGSF*LSIRKW
Trigger: CCACTTCCTGATGGAGAGTCAGAAGCTTCCAGGCCT...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGACAGCTGGGCCATGCTaGAGGCTACCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWTAGPC*RLPRAG
Trigger: CCCAGCCCTGGGTAGCCTGCAGCATGGCCCAGCTGT...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VGEEEESLDTRQAPTTALLAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR GCA 90 bp CACACCATAGTTCCGGACCCCGGGGAAGCCATCCATGTCTCCGTAACAGGCCTCCTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HTIVPDPGEAIHVSVTGLLAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...GAGGCCTGTTACGGAGACATGGATGGCTTCCCCGGGGTCCGGAACTATGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCAGCCACCATCCCAGGCTaGATACAGTTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPATIPG*IQLARG
Trigger: ACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp CCTGGACTCCGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCACGTTGAAGCGGCTGTaGTTATTGGGGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PGLRRLRGEKGLPGFPEITLKRL*LLGKPV
Trigger: GACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGT...GATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGATTGGAGACCCATAGGGAGCTCGCTGGGCCATaGCCACAGAGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGELRYPQGGYPRLETHRELAGP*PQSLIL
Trigger: GAGGATGAGGCTCTGTGGGCATGGCCCAGCGAGCTC...CCTATGGGTCTCCAATCTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGTCGGTGAGCGACGCTaGGTACGCAGGCAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCVGERR*VRRQCH
Trigger: GTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGAC...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGTGGCGGGGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCT +
Preference number: 4 (lower is better)
Translates to: HLDSSTTPRHVVTSCGGGVTGLS*GLDGIP
Trigger: AGGTATCCCATCCAGACCCCACGAGAGGCCTGTTAC...CCCGCCACCACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGACAGTTGGCCCGTGGTaGCAATCTCTGCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRTVGPW*QSLHPA
Trigger: AGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGT...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TCAAATTCTAGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTGGTTGGAGGCTGGGTTaGAGGCCTCAGGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SNSRSVLGASAGSSGVELGWRLG*RPQGWQ
Trigger: CTGCCATCCCTGAGGCCTCCAACCCAGCCTCCAACC...AAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCTAGAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGGATGGGGATTCACTCTCTGTaGCTTCCTGAGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGSSGVELPPPPSSMMGMGIHSL*LPEAAA
Trigger: TGCAGCTGCCTCAGGAAGCCACAGAGAGTGAATCCC...CATCCCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCTTCTGAGAACCCCGTaGGCGGTACCATGGATTGTG +
Preference number: 4 (lower is better)
Translates to: VGEEEESLDTRQAPTTALLLRTP*AVPWIV
Trigger: CACAATCCATGGTACCGCCCACGGGGTTCTCAGAAG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACACAGAGTCTCAGTAGGTaGTCCATGGACCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTQSLSR*SMDPWR
Trigger: CCTCCAAGGGTCCATGGACCACCTACTGAGACTCTG...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCATTGAGTCCGATCCACTaGTACTCCCGGTACCGGTTG +
Preference number: 4 (lower is better)
Translates to: LPVVAGAQGVRENLGDRALSPIH*YSRYRL
Trigger: CAACCGGTACCGGGAGTACCAGTGGATCGGACTCAA...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGGGCACACAGGAGATCTaGGGGGCCTCCCAACGACCG +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWGTQEI*GASQRP
Trigger: CGGTCGTTGGGAGGCCCCCCAGATCTCCTGTGTGCC...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGGATGCTCTGTGGGGCTaGCGAGATGTGAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPDALWG*RDVSHR
Trigger: CCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACGGTGATGAGGACCCTTaGAGAGGCCTGAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHGDEDP*RGLRML
Trigger: GAGCATCCTCAGGCCTCTCCAAGGGTCCTCATCACC...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCTCGTGGGGTCTGGATaGGATACCTTTGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RSVLGASAGSSGVELPPPLVGSG*DTFDLD
Trigger: GTCAAGGTCAAAGGTATCCCATCCAGACCCCACGAG...AGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCAAAAGCGCGGTCCTCTaGGCTGTCTCCTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVKSAVL*AVSFQN
Trigger: GTTCTGGAAGGAGACAGCTCAGAGGACCGCGCTTTT...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GTCTCAGTAGGTGGTCCATGGACCCTTGGAGGCCTGGAAGCTTCTGACTCTCCACTCCTCCGTCCTCCATaGTGGGGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VSVGGPWTLGGLEASDSPLLRPP*WGWSRW
Trigger: CCATCTACTCCATCCCCATCATGGAGGACGGAGGAG...TGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAAAGACGCGGAGAGCTaGGATACCCACAAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTKDAES*DTHKVD
Trigger: ATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTT...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGCCGGAGGTTGAGGGGTaGGAAGGGACTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEPEVEG*EGTPRL
Trigger: AAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGG...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp CGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGATTGGAGACCCATAGGGCCACCATCCCAGGCTaGATACAGTTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RGELRYPQGGYPRLETHRATIPG*IQLARG
Trigger: ACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC...CCTATGGGTCTCCAATCTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GTGGGCGGTACCATGGATTGTGTTTCAAATTCTAGGAGCGTCCTAGGGGCCTCTCTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VGGTMDCVSNSRSVLGASLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...AGAGGCCCCTAGGACGCTCCTAGAATTTGAAACACAATCCATGGTACCGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp GTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGCGTCCTAGGGGCCTCTaGTGGGTCTTCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSEAVDVEAAVLIGEASLRPRGL*WVFWSG
Trigger: TCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACG...CAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR GCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGCTCCCCCACCTCTCTTaGCTCAACCAGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPLPHLS*LNQSGR
Trigger: CCTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAG...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp AGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTCGTCCCAGCCGGGGTTaGAGAAGCGGAGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RGQLRHLGIYSGPDGRSGRPSRG*RSGGQH
Trigger: ATGTTGGCCTCCGCTTCTGCAACCCCGGCTGGGACG...ACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGATGCTGGCCAGATaGGCGCCGTACATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWLMLAR*APYIRH
Trigger: GTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAG...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGCAGTGTTCAAGGCCTTaGCCCCTAGGGACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRQCSRP*PLGTWH
Trigger: ATGCCAGGTCCCTAGGGGGCAAGGCCTTGAACACTG...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAGAGCACGCCCTGCAGTaGCGCGTCGCCCGCGATGCG +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEEHALQ*RVARDA
Trigger: CGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTC...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAACCGGCGGCTCGGCGGTaGCCGCAGGTAGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEPAARR*PQVVDV
Trigger: CACGTCCACTACCTGCGGCCACCGCCGAGCCGCCGG...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGAGATACCTGAGTCGTTaGGGCGCAGCTCGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VSEAVDVEAAVLIGEASLRYLSR*GAARSA
Trigger: CGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCT...CAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACATCCGGGGTGGCGATGTaGGCTCCAATGCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTSGVAM*APMRAQ
Trigger: CTGTGCCCGCATTGGAGCCCACATCGCCACCCCGGA...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGAGAGCTGCTCCGGGGTaGCGATGTGGGCTCCAATGC +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISERAAPG*RCGLQC
Trigger: GCATTGGAGCCCACATCGCCACCCCGGAGCAGCTCT...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGACTCGTGGGGTCTGGATaGGATACCTCACGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRLVGSG*DTSRSD
Trigger: ATCAGACCGTGAGGTATCCCATCCAGACCCCACGAG...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTGCCTCTCGTGGGGTCTaGATGGGATACCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASASRGV*MGYLTV
Trigger: GACCGTGAGGTATCCCATCCAGACCCCACGAGAGGC...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp CACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCCCGGGGAAGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCT +
Preference number: 4 (lower is better)
Translates to: HIIEVIRVHHTIVPDPGEVTGLS*GLDGIP
Trigger: AGGTATCCCATCCAGACCCCACGAGAGGCCTGTTAC...TTCCCCGGGGTCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp CTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCATGATGGGCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LCWVFWSGASTSSVLHDGQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...CCCATCATGGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CCA 90 bp GTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCTGCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: VGEEEESLDTRQAPTTALQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...CAGCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CCA 90 bp CACACCATAGTTCCGGACCCCGGGGAAGCCATCCATGTCTCCGTAACAGGCCTCTTGGGGAAGCCAGTCTaGTTGGGGAAGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HTIVPDPGEAIHVSVTGLLGKPV*LGKRKR
Trigger: TCTCTTCCTCTTCCCCAACCAGACTGGCTTCCCCAA...GAGGCCTGTTACGGAGACATGGATGGCTTCCCCGGGGTCCGGAACTATGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCTTCTGAGAACCCCGTaGGCGGTACCATGGATTGTG +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTLLRTP*AVPWIV
Trigger: CACAATCCATGGTACCGCCCACGGGGTTCTCAGAAG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTTTCTGGGTCCTCCTCTaGGTGCAGAGCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGQLRHLGIYSGPDGRSGFWVLL*VQSSGR
Trigger: CCTGCCCGAGCTCTGCACCCAGAGGAGGACCCAGAA...ACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGATCAGGAACTGTCACCTaGACTCCAGTACCACCCCTC +
Preference number: 4 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRSGTVT*TPVPPL
Trigger: GAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCTGA...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GTGGGCGGTACCATGGATTGTGTTTCAAATTCTAGGAGCGTCCTAGGGGCCTCTACAGGAAAGTCCACTTaGCCCGCGGAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VGGTMDCVSNSRSVLGASTGKST*PAESPA
Trigger: TGCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGT...AGAGGCCCCTAGGACGCTCCTAGAATTTGAAACACAATCCATGGTACCGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAGCGCGTCGCCCGCGATaGGCACGCGAAAAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEARRPR*AREKRG
Trigger: ACCGCGCTTTTCGCGTGCGCATCGCGGGCGACGCGC...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACACTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCCCGGGGAAACGTTGAAGCGGCTGTaGTTATTGGGGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HIIEVIRVHHTIVPDPGETLKRL*LLGKPV
Trigger: GACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGT...TTCCCCGGGGTCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp AGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTCGTCCTAGGGGCCTCTaGTGGGTCTTCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGQLRHLGIYSGPDGRSGRPRGL*WVFWSG
Trigger: TCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACG...ACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGTGGGTGACAGGGCAGTaGTGTGGCCGGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWWVTGQ*CGRQCS
Trigger: TGAACACTGCCGGCCACAGCACTGCCCTGTCACCCA...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCTCGTGGGGTCTGGATaGGATACCTCACGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSLVGSG*DTSRSD
Trigger: ATCAGACCGTGAGGTATCCCATCCAGACCCCACGAG...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CAGCTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCT +
Preference number: 4 (lower is better)
Translates to: QLKGTAHRRMKGVVENRPVTGLS*GLDGIP
Trigger: AGGTATCCCATCCAGACCCCACGAGAGGCCTGTTAC...CGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGCCCCCACCACAGCGCTaGCTGGGTGTGACGATGGGG +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVPPPQR*LGVTMG
Trigger: CCCCATCGTCACACCCAGCCAGCGCTGTGGTGGGGG...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGGTTGGGGAAGCCAGTCTaGTTGGGGAAGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LPGFPEINRRQLKGTAHRLGKPV*LGKRKR
Trigger: TCTCTTCCTCTTCCCCAACCAGACTGGCTTCCCCAA...CCTGTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCGGGATTCACTCTCTGTaGCTTCCTGAGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSGIHSL*LPEAAA
Trigger: TGCAGCTGCCTCAGGAAGCCACAGAGAGTGAATCCC...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp ATACTTCACAGAAGTAGTTGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGAGCCCTTGCTGGCGCCTaGGAGAGTGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILHRSSCLRLCGGTGSPGALAGA*ESDSSW
Trigger: CCAGGAGGAGTCACTCTCCCAGGCGCCAGCAAGGGC...TCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCAACTACTTCTGTGAAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGGGACCCTTGGAGGCCTaGAAGCTTCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRGPLEA*KLLTLH
Trigger: ATGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCC...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCGGACCCTTGGAGGCCTaGAAGCTTCTGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSGPLEA*KLLTLH
Trigger: ATGGAGAGTCAGAAGCTTCCAGGCCTCCAAGGGTCC...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACACCGTACATCCGGCACTaGGTCTCTGCCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTPYIRH*VSASSQ
Trigger: CTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGG...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CCTGGACTCCGGAGGTTGAGGGGTGAGAAGGGACTCCCAGGCTTCCCTGAGATCGTGGATATCCGAGATTaGAGACCCATAGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGLRRLRGEKGLPGFPEIVDIRD*RPIGRG
Trigger: ACCTCTACCTATGGGTCTCCAATCTCGGATATCCAC...GATCTCAGGGAAGCCTGGGAGTCCCTTCTCACCCCTCAACCTCCGGAGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
3UTR CAA 72 bp ATAGCTCAGGACCACCAGTTGCCTCCCCCACCTCTCTaGCCTCAACCAGAGTGGAAGGTGATGGGGATGCTA +
Preference number: 4 (lower is better)
Translates to: IAQDHQLPPPPL*PQPEWKVMGML
Trigger: TAGCATCCCCATCACCTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGACTGCGCGAGCGTaGGGAGAGGCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKETARA*GEAGAA
Trigger: TGCGGCCCCAGCCTCTCCTCACGCTCGCGCAGTCTC...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGGCCTCGTTCACCTTaGCGCGCACTCCCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPERPRSP*RALPAP
Trigger: TGGCGCGGGGAGTGCGCGTCAAGGTGAACGAGGCCT...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGACAGCGATAGATACCTaGGTCGTTGGGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWTAIDT*VVGAQL
Trigger: GAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGT...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTCTCCTCCGTCCTCCATaGTGGGGATGGAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCLLRPP*WGWSRW
Trigger: CCATCTACTCCATCCCCATCATGGAGGACGGAGGAG...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp AGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTCTTACCTTCCTCTTCTaGGAACCCCGTGGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RGQLRHLGIYSGPDGRSGLTFLF*EPRGRY
Trigger: GTACCGCCCACGGGGTTCTCAGAAGAGGAAGGTAAG...ACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAGGGGACACAGTCACCTaGTGCGGGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEGDTVT*CGDHGH
Trigger: GTGGCCGTGGTCCCCGCATCAGGTGACTGTGTCCCC...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGGTTCCTCGGGTGTGCTaGTGCTGGCCAGATGCGCGC +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVVPRVC*CWPDAR
Trigger: GCGCGCATCTGGCCAGCATCAGCACACCCGAGGAAC...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp CCAGGGAGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCACTCCATTGTCCCTaGTCATGCCACACCATGACC +
Preference number: 4 (lower is better)
Translates to: PGRGQLRHLGIYSGPDGRSLHCP*SCHTMT
Trigger: GGTCATGGTGTGGCATGATCAGGGACAATGGAGTGA...TCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGGGCGGCCGAACACTTaGGCCAGGGGCAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKGRPNT*ARGSSG
Trigger: ACCGGAGCTGCCCCTGGCTCAAGTGTTCGGCCGCCC...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTCTCCCCCACCTCTCTTaGCTCAACCAGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCLPHLS*LNQSGR
Trigger: CCTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAG...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATACCTGAGTCGTTaGGGCGCAGCTCGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTRYLSR*GAARSA
Trigger: CGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCT...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGCACCCTGGGCTGCAGTaGTCCAGGCCACCATCCCAG +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVHPGLQ*SRPPSQ
Trigger: CTGGGATGGTGGCCTGGACCACTGCAGCCCAGGGTG...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp CATAACAGTACACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGATGGAGGCCTCAGGGATaGCAGAAGGCTGGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: HNSTHHRGHPGPPHHSSGWRPQG*QKAGPS
Trigger: ACTCGGCCCAGCCTTCTGCCATCCCTGAGGCCTCCA...TCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTGTACTGTTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGACCTCAGGGGCCCGTGTaGCTGGAAGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERPQGPV*LEAGKG
Trigger: CCCCTTCCCTGCTTCCAGCCACACGGGCCCCTGAGG...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGAAAAGCGCGGTCCTCTaGGCTGTCTCCTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEKSAVL*AVSFQN
Trigger: GTTCTGGAAGGAGACAGCTCAGAGGACCGCGCTTTT...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAAGCGCTGGCTGGGTGTaGCGATGGGGTAGCGCACAC +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERSAGWV*RWGSAH
Trigger: GTGTGCGCTACCCCATCGTCACACCCAGCCAGCGCT...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TCAAATTCTAGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: SNSRSVLGASAGSSGVELGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...AAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCTAGAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR TCA 90 bp GTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGGGAAGCAGTAGACGTTaGAGCGGCTGTGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: VSEAVDVEAAVLIGEASLGSSRR*SGCAYW
Trigger: CCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCC...CAGACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR TCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGAGGCCTGGAAGCTTCTaGCTCTCCATCAGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWRPGSF*LSIRKW
Trigger: CCACTTCCTGATGGAGAGTCAGAAGCTTCCAGGCCT...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp ATACTTCACAGAAGTAGTTGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGACGTCCTAGGGGCCTCTaGTGGGTCTTCTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ILHRSSCLRLCGGTGSPGRPRGL*WVFWSG
Trigger: TCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACG...TCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCAACTACTTCTGTGAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGATCTGCACCCCGCTCCTaGCAGTACGCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERSAPRS*QYARAS
Trigger: GGAAGCACGGGCGTACTGCCAGGAGCGGGGTGCAGA...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGGATTCACTCTCTGTaGCTTCCTGAGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCGIHSL*LPEAAA
Trigger: TGCAGCTGCCTCAGGAAGCCACAGAGAGTGAATCCC...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCSVGGP*TLGGLE
Trigger: TTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGA...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGTCAGTAGGTGGTCCATaGACCCTTGGAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISESVGGP*TLGGLE
Trigger: TTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGA...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGGGCAGCACTGGCTaGGCCTGCACTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERVGSTG*ACTEVP
Trigger: AGGGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCAC...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GAGAAGGGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGCAGGAGAGTTTGGGATaGTGGTGGGTTAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: EKGLPGFPEINRRQLKGTQESLG*WWVKGL
Trigger: TAGTCCTTTAACCCACCATCATCCCAAACTCTCCTG...CGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR GCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGGTTGGGTCGCGGCACTaGGAAGTTTGTCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVVGSRH*EVCRLL
Trigger: GAGGAGGCGACAAACTTCGCAGTGCCGCGACCCAAC...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAACGATGTGGGCTCCAATaGGGGCACAGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKRCGLQ*GHRPPG
Trigger: CCCAGGAGGCCTGTGCCCGCATTGGAGCCCACATCG...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGCGTGGTGGCAATCTCTaGACCCCGCTCCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVRGGNL*TPLLAV
Trigger: TACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACG...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCACTAGCCACCCTGGGCTaGAGTGGTCCAGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPLATLG*SGPGHH
Trigger: ATGGTGGCCTGGACCACTGCAGCCCAGGGTGGCTAG...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR GCA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGAGGACAGGTGGTAGTTaGAGGGCACGTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWRTGGS*RARHSI
Trigger: AATGGAGTGACGTGCCCTGCAACTACCACCTGTCCT...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGCGTGAGGAGAGGCTaGGGCCGCAGGACATTCGGA +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPESVRRG*GRRTFG
Trigger: TCCGAATGTCCTGCGGCCCCAGCCTCTCCTCACGCT...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGCAATGTCAGCTTCTCTaGAGGGTCACCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEQCQLL*RVTQEQ
Trigger: CTGTTCCTGGGTGACCCTCCAGAGAAGCTGACATTG...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp ATACTTCACAGAAGTAGTTGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGACATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: ILHRSSCLRLCGGTGSPGHTVGP*WQSLHP
Trigger: GGGGTGCAGAGATTGCCACCACGGGCCAACTGTATG...TCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCAACTACTTCTGTGAAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTTTGGGGAAGCCAGTCTaGTTGGGGAAGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCLGKPV*LGKRKR
Trigger: TCTCTTCCTCTTCCCCAACCAGACTGGCTTCCCCAA...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACCCGTGGGCGGTACCATaGATTGTGTTTCAAATTCTA +
Preference number: 4 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHPWAVP*IVFQIL
Trigger: TAGAATTTGAAACACAATCCATGGTACCGCCCACGG...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCTCCTCCTGGGCTGCTaGCTCAGTGGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENLLLGC*LSGERG
Trigger: GCCTCTCTCCCCACTGAGCCAGCAGCCCAGGAGGAG...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTCCCAGCTCCTTCGTGTaGAAAAGTGCTTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCPSSFV*KSACSR
Trigger: CCTGCTACAAGCACTTTTCCACACGAAGGAGCTGGG...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACACAACGACCGTTCTCTTaGCATCGGATCAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LENPERVGTVLPRGIEGTQRPFS*HRISGR
Trigger: TCTGCCGCTGATCCGATGCCAAGAGAACGGTCGTTG...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGAGGGCAGTTGAGCCTTaGGCAGAATTACCTGATGCG +
Preference number: 4 (lower is better)
Translates to: DHRVKTRRAEIPTRWISERAVEP*AELPDA
Trigger: CGCATCAGGTAATTCTGCCCAAGGCTCAACTGCCCT...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR TCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCAGGATACCTCACGGTCTaGTCCGACAGCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPGYLTV*SDSQPA
Trigger: TGCTGGCTGGCTGTCGGATCAGACCGTGAGGTATCC...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR TCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGGAGGGAAAATTTGGGTaGCAGGGCAGTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVEGKFG*QGSAVA
Trigger: GGCCACAGCACTGCCCTGTCACCCAAATTTTCCCTC...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGCCACCATCCCAGGCTaGATACAGTTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERATIPG*IQLARG
Trigger: ACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp CTCCATTTAGGTCTTCAGCATAACAGTACACATCATAGAGGTCATCCGGGTCCAGCCACCATCCCAGGCTaGATACAGTTGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LHLGLQHNSTHHRGHPGPATIPG*IQLARG
Trigger: ACCACGGGCCAACTGTATGCAGCCTGGGATGGTGGC...TGGACCCGGATGACCTCTATGATGTGTACTGTTATGCTGAAGACCTAAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAGCCTCTCGTGGGGTCTaGATGGGATACCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEASRGV*MGYLTV
Trigger: GACCGTGAGGTATCCCATCCAGACCCCACGAGAGGC...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACGACAGGGCAGTGCTGTaGCCGGCAGTGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENDRAVL*PAVFKA
Trigger: GGCCTTGAACACTGCCGGCCACAGCACTGCCCTGTC...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAATGTTGTCACTTCCTGTaGTGGCGGGAGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPECCHFL*WRERRV
Trigger: CACCCTGCGCTCCCGCCACCACAGGAAGTGACAACA...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGAAAAGCGCGGTCCTCTaGGCTGTCTCCTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FTDTPSCKPIPLENPERVKSAVL*AVSFQN
Trigger: GTTCTGGAAGGAGACAGCTCAGAGGACCGCGCTTTT...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACACAGGAAAGTCCACTTaGCCCGCGGAGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENTGKST*PAESPA
Trigger: TGCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGT...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAACATTGTGGCAGGGGCTaGGGACACAGTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPEHCGRG*GHSHLM
Trigger: CATCAGGTGACTGTGTCCCCAGCCCCTGCCACAATG...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
3UTR CAA 72 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTaGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIP*ENPERVGTVLP
Trigger: AGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGATTTACTCCGGCCCTaGTGGAAGATCTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERDLLRP*WKIWCP
Trigger: TGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATC...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCATACAGTTGGCCCGTaGTGGCAATCTCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENHTVGP*WQSLHP
Trigger: GGGGTGCAGAGATTGCCACCACGGGCCAACTGTATG...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp AGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTCCGTGGGCGGTACCATaGATTGTGTTTCAAATTCTA +
Preference number: 4 (lower is better)
Translates to: RGQLRHLGIYSGPDGRSGPWAVP*IVFQIL
Trigger: TAGAATTTGAAACACAATCCATGGTACCGCCCACGG...ACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCTAGGTTCCTCTCCCTaGGAGTGGGCAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENLGSSP*EWAESQ
Trigger: CTGAGACTCTGCCCACTCCCAGGGAGAGGAACCTAG...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR TCA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACGATCATGCCACACCATaGCCACGCAGTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENDHATP*PRSSLQ
Trigger: CTGGAGAGAACTGCGTGGTCATGGTGTGGCATGATC...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAACTGGCAGTACGCCCGTaGTTCCTCCAATGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKLAVRP*FLQCQL
Trigger: AAGCTGACATTGGAGGAAGCACGGGCGTACTGCCAG...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAACGTTGAAGCGGCTGTaGTTATTGGGGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VDFTDTPSCKPIPLENPETLKRL*LLGKPV
Trigger: GACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGT...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAACAGAGTCTCAGTAGGTaGTCCATGGACCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKQSLSR*SMDPWR
Trigger: CCTCCAAGGGTCCATGGACCACCTACTGAGACTCTG...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CCA 90 bp ATACTTCACAGAAGTAGTTGCTTAAGGCTCTGTGGGGGTACGGGTTCTCCTGGAGAGATACCCACAAGGTaGATATCCGAGATTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILHRSSCLRLCGGTGSPGEIPTR*ISEIGD
Trigger: GTCTCCAATCTCGGATATCCACCTTGTGGGTATCTC...TCCAGGAGAACCCGTACCCCCACAGAGCCTTAAGCAACTACTTCTGTGAAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CCA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAAAAACCCAGAAAGAGTaGGCACAGTGCTCCCTAGAG +
Preference number: 4 (lower is better)
Translates to: DFTDTPSCKPIPLENPERKTQKE*AQCSLE
Trigger: CTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTT...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR GCA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAACAGACACTCCATCCTaGAAGCCCATTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LILQTLHPASPFPWKTQKTDTPS*KPIPLE
Trigger: TTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGT...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS TCA 90 bp GGCGGCTCGGCGGTGGCCGCAGGTAGTGGACGTGGCAAGGGATGGTaGGGGCGCCGCCGAGCACGCCCTGCAGTGGCGCGTCGCCCGCGA +
Preference number: 5 (lower is better)
Translates to: GGSAVAAGSGRGKGW*GRRRARPAVARRPR
Trigger: TCGCGGGCGACGCGCCACTGCAGGGCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCACGTCCACTACCTGCGGCCACCGCCGAGCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 90 bp CGCAGCCGCCAGCAGATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTaGGGTGACTGCCTTGGAAACCCTTCCCCGCGATCCAGCACCCGC +
Preference number: 5 (lower is better)
Translates to: RSRQQMAAVPRSRAV*GDCLGNPSPRSSTR
Trigger: GCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTGGCGGCTGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 90 bp TGGAGGAGGCCGACGGAGGTCGGAGAGCAGGGAGGTTGGAGGGATTaGAGGCGGCCCCCTGCACGGCGGCCCGGCCCACACAGGCGCACT +
Preference number: 5 (lower is better)
Translates to: WRRPTEVGEQGGWRD*RRPPARRPGPHRRT
Trigger: AGTGCGCCTGTGTGGGCCGGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCTCCGACCTCCGTCGGCCTCCTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 90 bp CCGGGGGTCTCCTCCGGGTGCACGGCTCAGTCCTGCAGCTGCAGCTaGGACTGCGGCGGAGACTGCGCGAGCGTGAGGAGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PGVSSGCTAQSCSCS*DCGGDCASVRRGWG
Trigger: GCCCCAGCCTCTCCTCACGCTCGCGCAGTCTCCGCCGCAGTCTCAGCTGCAGCTGCAGGACTGAGCCGTGCACCCGGAGGAGACCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329117.10
ENST00000424639.5
ENST00000457777.6
ENST00000479949.5
CDS TCA 90 bp CCGCCAGCAGATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTaGCTGCCTTGGAAACCCTTCCCCGCGATCCAGCACCCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PPADGGRSPLPGGLR*LPWKPFPAIQHPPL
Trigger: CAAGGGCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS GCA 90 bp GGAGGTCGGAGAGCAGGGAGGTTGGAGGGATTGGAGGCGGCCCCCTaGACGGCGGCCCGGCCCACACAGGCGCACTCTACTGCGCGAACC +
Preference number: 5 (lower is better)
Translates to: GGRRAGRLEGLEAAP*TAARPTQAHSTART
Trigger: GGTTCGCGCAGTAGAGTGCGCCTGTGTGGGCCGGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCTCCGACCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS GCA 90 bp CAGCAGATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTGACTaGCTTGGAAACCCTTCCCCGCGATCCAGCACCCGCCCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: QQMAAVPRSRAVCGD*LGNPSPRSSTRPCR
Trigger: CCGACAAGGGCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 90 bp GGGGCGCAGCTCGCTCAGCGCCAGGGAGACGTCGGTGAGCGACGCTaGGTACGCAGGCAGTGCCACGCGGAACCGGTAGGCCTCGTTCAC +
Preference number: 5 (lower is better)
Translates to: GAQLAQRQGDVGERR*VRRQCHAEPVGLVH
Trigger: GTGAACGAGGCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGGCGCTGAGCGAGCTGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CCA 90 bp GGTCTAGGGAGACGAAGGCGTGCAGTGAGCGCAGCCGCCAGCAGATaGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTGACTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GLGRRRRAVSAAASR*RPFPAPGRSAVTAL
Trigger: CAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTGGCGGCTGCGCTCACTGCACGCCTTCGTCTCCCTAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 90 bp CTGAGTCGTTGGGGCGCAGCTCGCTCAGCGCCAGGGAGACGTCGGTaGGCGACGCTGGGTACGCAGGCAGTGCCACGCGGAACCGGTAGG +
Preference number: 5 (lower is better)
Translates to: LSRWGAARSAPGRRR*ATLGTQAVPRGTGR
Trigger: CCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGGCGCTGAGCGAGCTGCGCCCCAACGACTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 90 bp GGCCTCGTTCACCTTGACGCGCACTCCCCGCGCCACCAGCACCTCTaGCTCCCGGCCCCGGGACAGGAAAGTCCACTTGACCCGCGGAGA +
Preference number: 5 (lower is better)
Translates to: GLVHLDAHSPRHQHL*LPAPGQESPLDPRR
Trigger: TCTCCGCGGGTCAAGTGGACTTTCCTGTCCCGGGGCCGGGAGGCAGAGGTGCTGGTGGCGCGGGGAGTGCGCGTCAAGGTGAACGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 90 bp CAGCGCCAGGGAGACGTCGGTGAGCGACGCTGGGTACGCAGGCAGTaGCACGCGGAACCGGTAGGCCTCGTTCACCTTGACGCGCACTCC +
Preference number: 5 (lower is better)
Translates to: QRQGDVGERRWVRRQ*HAEPVGLVHLDAHS
Trigger: GGAGTGCGCGTCAAGGTGAACGAGGCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 90 bp CCGATCCACTGGTACTCCCGGTACCGGTCTAGGGAGACGAAGGCGTaGAGTGAGCGCAGCCGCCAGCAGATGGCGGCCGTTCCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PIHWYSRYRSRETKA*SERSRQQMAAVPRS
Trigger: GGAGCGGGGAACGGCCGCCATCTGCTGGCGGCTGCGCTCACTGCACGCCTTCGTCTCCCTAGACCGGTACCGGGAGTACCAGTGGATCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 90 bp GGACACAGTCACCTGATGCGGGGACCACGGCCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCACTGGCTGGGCCTGCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GHSHLMRGPRPLHLG*RCQWAALAGPALRS
Trigger: GGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGGCCGTGGTCCCCGCATCAGGTGACTGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS CCA 90 bp GGGCAGAATTACCTGATGCGGGGACCACGGCCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCACTGGCTGGGCCTGCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GQNYLMRGPRPLHLG*RCQWAALAGPALRS
Trigger: GGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGGCCGTGGTCCCCGCATCAGGTAATTCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp GATGCTCTGTGGGGCTGGCGAGATGTGAGCCACAGGTGGAGGGCCCAATGGCAGGCTGCAGGACTGCCCTaGCTGGCGCCTGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: DALWGWRDVSHRWRAQWQAAGLP*LAPGRV
Trigger: CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGC...CTGCCATTGGGCCCTCCACCTGTGGCTCACATCTCGCCAGCCCCACAGAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACTACCCAGGGCTGGGGTaGGGTCGCGGCACTGCGAAG +
Preference number: 5 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYYPGLG*GRGTAK
Trigger: CTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGTA...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCATGGGCGGCCGAACACTaGAGCCAGGGGCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAWAAEH*SQGQLR
Trigger: CCGGAGCTGCCCCTGGCTCAAGTGTTCGGCCGCCCA...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS GCA 90 bp GGGCCTCCCAACGACCGTTCTCTTGGCATCGGATCAGCGGCAGATTaGGCTGGGCCAGTCCTTCCCGGCACCGGTAGCGAAGCACAGTGT +
Preference number: 5 (lower is better)
Translates to: GPPNDRSLGIGSAAD*AGPVLPGTGSEAQC
Trigger: ACACTGTGCTTCGCTACCGGTGCCGGGAAGGACTGGCCCAGCGCAATCTGCCGCTGATCCGATGCCAAGAGAACGGTCGTTGGGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS GCA 90 bp AAAAGTGCTTGTAGCAGGCGCCCTGGAAGGCGTCCCAGCCGGGGTTaGAGAAGCGGAGGCCTGCGGCACATAAGGGCGGGCATCTTAGGG +
Preference number: 5 (lower is better)
Translates to: KSACSRRPGRRPSRG*RSGGLRHIRAGILG
Trigger: CCCTAAGATGCCCGCCCTTATGTGCCGCAGGCCTCCGCTTCTGCAACCCCGGCTGGGACGCCTTCCAGGGCGCCTGCTACAAGCACTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 90 bp ACGGCCACTCCACCTCGGCTGGCGCTGTCAGTGGGCAGCACTGGCTaGGCCTGCACTGAGGTCCCTGCTGGGGCAGTTCTTCCAGAATTA +
Preference number: 5 (lower is better)
Translates to: TATPPRLALSVGSTG*ACTEVPAGAVLPEL
Trigger: TAATTCTGGAAGAACTGCCCCAGCAGGGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000361588.5
CDS-3UTR CAA 90 bp CCTGGGCTGCAGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGCCAGGCTGCATACAGTaGGCCCGTGGTGGCAATCTC +
Preference number: 5 (lower is better)
Translates to: PGLQWSRPPSQAAYSWPVPGCIQ*ARGGNL
Trigger: GAGATTGCCACCACGGGCCAACTGTATGCAGCCTGG...CACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACTGCAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CAA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCAGCTGCAGGACTGCCCTaGCTGGCGCCTGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAAAGLP*LAPGRV
Trigger: CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGC...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp CCTGGGCTGCAGTGGTCCAGGCCACCATCCCAGGCTGCATACAGTTGGCCCGTGCCTCCCCCACCTCTCTaGCCTCAACCAGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PGLQWSRPPSQAAYSWPVPPPPL*PQPEWK
Trigger: CTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAGG...CACGGGCCAACTGTATGCAGCCTGGGATGGTGGCCTGGACCACTGCAGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp CTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCACCTCCTCCGTCCTCCGCTCAGGACCACCAGTaGCCTCCCCCACCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LGASAGSSGVELPPPPSSAQDHQ*PPPPLL
Trigger: CAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAGC...GGAGGACGGAGGAGGTGGAAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp AGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACGCCCGTGCTCCTCCACCTTTGACCTaGACCTCCACAGCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: SWPVVAISAPRSWQYARAPPPLT*TSTASL
Trigger: CAGCGACGCTGTGGAGGTCAAGGTCAAAGGTGGAGG...AGCACGGGCGTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS TCA 90 bp GCTGCTGTCATCGATGCCGTGCTGGACCTCACAGCGATAGATACCTaGGTCGTTGGGGCGCAGCTCGCTCAGCGCCAGGGAGACGTCGGT +
Preference number: 5 (lower is better)
Translates to: AAVIDAVLDLTAIDT*VVGAQLAQRQGDVG
Trigger: ACCGACGTCTCCCTGGCGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGTGAGGTCCAGCACGGCATCGATGACAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000457777.6
ENST00000479949.5
CDS TCA 90 bp ACTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTaGCAGGGCAGTGCTGTGGCCGGCAGTGTTCAAGGCCTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: TSCGGGSAGCEGKFG*QGSAVAGSVQGLAP
Trigger: GGGGGCAAGGCCTTGAACACTGCCGGCCACAGCACTGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CCA 90 bp GGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCAGTGCTGTaGCCGGCAGTGTTCAAGGCCTTGCCCCCTAGGGACCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: GAQGVRENLGDRAVL*PAVFKALPPRDLAW
Trigger: CCATGCCAGGTCCCTAGGGGGCAAGGCCTTGAACACTGCCGGCCACAGCACTGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS-3UTR CAA 90 bp AGAGTGGAAGGTGATGGGGATGCTAGGTTCCTCTCCCTGGGAGTGGGCAGAGTCGCTGCAGGACTGCCCTaGCTGGCGCCTGGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: RVEGDGDARFLSLGVGRVAAGLP*LAPGRV
Trigger: CACTCTCCCAGGCGCCAGCAAGGGCAGTCCTGCAGC...GACTCTGCCCACTCCCAGGGAGAGGAACCTAGCATCCCCATCACCTTCCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCGCGTCCCAGCCGGGGTaGCAGAAGCGGAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTASQPG*QKRRPT
Trigger: TGTTGGCCTCCGCTTCTGCAACCCCGGCTGGGACGC...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS TCA 90 bp ACCTCGGCTGGCGCTGTCAGTGGGCAGCACTGGCTGGGCCTGCACTaGGGTCCCTGCTGGGGCAGTTCTTCCAGAATTATCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TSAGAVSGQHWLGLH*GPCWGSSSRIIFRG
Trigger: CCCTCTGAAGATAATTCTGGAAGAACTGCCCCAGCAGGGACCTCAGTGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000361588.5
CDS GCA 90 bp GCTGATGCTGGCCAGATGCGCGCCGTACATCCGGCACTGGGTCTCTaGCTCCTCCCAGCTCCTTCGTGTGGAAAAGTGCTTGTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ADAGQMRAVHPALGL*LLPAPSCGKVLVAG
Trigger: GCCTGCTACAAGCACTTTTCCACACGAAGGAGCTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS GCA 90 bp CTGTTGATGAAGTCCTGTTCCTCGGGTGTGCTGATGCTGGCCAGATaGGCGCCGTACATCCGGCACTGGGTCTCTGCCTCCTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLMKSCSSGVLMLAR*APYIRHWVSASSQL
Trigger: GAGCTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGCACACCCGAGGAACAGGACTTCATCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 90 bp TCGGGTGTGCTGATGCTGGCCAGATGCGCGCCGTACATCCGGCACTaGGTCTCTGCCTCCTCCCAGCTCCTTCGTGTGGAAAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SGVLMLARCAPYIRH*VSASSQLLRVEKCL
Trigger: CAAGCACTTTTCCACACGAAGGAGCTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGCACACCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS-3UTR CAA 90 bp CCAGGGAGAGGGCAGTTGAGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATACCCAGGGCTGGGGTaGGGTCGCGGCACTGCGAAG +
Preference number: 5 (lower is better)
Translates to: PGRGQLRHLGIYSGPDGRYPGLG*GRGTAK
Trigger: CTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGTA...TCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp CACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCCCGGGGAACCATCAGAGGCTGGGTaGGAGGCTGGGTTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: HIIEVIRVHHTIVPDPGEPSEAG*EAGLEA
Trigger: GGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATGG...TTCCCCGGGGTCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS GCA 90 bp TTGTTGATGAAGTCCTGTTCCTCGGGTGTGCTGATGCTGGCCAGATaGGCGCCGTACATCCGGCACTGGGTCTCTGCCTCCTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLMKSCSSGVLMLAR*APYIRHWVSASSQL
Trigger: GAGCTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGCACACCCGAGGAACAGGACTTCATCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TCAAATTCTAGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTGCGGCACTGCGAAGTTaGTCGCCTCCTCCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SNSRSVLGASAGSSGVELAALRS*SPPPGV
Trigger: GACCCCCGGAGGAGGCGACAAACTTCGCAGTGCCGC...AAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCTAGAATTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp CAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAACGACCCCTTTGACCTaGACCTCCACAGCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: QWRGWDHRVKTRRAEIPTTTPLT*TSTASL
Trigger: CAGCGACGCTGTGGAGGTCAAGGTCAAAGGGGTCGT...TGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCGTGGTCCATGGACCCTaGGAGGCCTGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRVVHGP*EAWKLL
Trigger: CAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCAC...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp AAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGCTCAGGACCACCAGTaGCCTCCCCCACCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: KGTAHRRMKGVVENRPSPAQDHQ*PPPPLL
Trigger: CAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAGC...AGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGAGCAGTGTTCAAGGCCTaGCCCCCTAGGGACCTGGCA +
Preference number: 5 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRAVFKA*PPRDLA
Trigger: TGCCAGGTCCCTAGGGGGCAAGGCCTTGAACACTGC...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS GCA 90 bp CGCACTCTACTGCGCGAACCTCCACTCTCCGTTCCCGAAGGCCACTaGCTAAGCGTAGGGTGGGAAGGGAGAGAGAATGAGAAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: RTLLREPPLSVPEGH*LSVGWEGRENEKGS
Trigger: ACTCCCCTTCTCATTCTCTCTCCCTTCCCACCCTACGCTTAGGCAGTGGCCTTCGGGAACGGAGAGTGGAGGTTCGCGCAGTAGAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS-3UTR CAA 90 bp GGTCAGTGGCGGGGCTGGGATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCCCAGCCAGCATCACATaGCTCATAGCCCCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: GQWRGWDHRVKTRRAEIPPASIT*LIAPKV
Trigger: TACCTTGGGGGCTATGAGCAATGTGATGCTGGCTGG...GGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATCCCAGCCCCGCCACTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACCCAGGCTGCATACAGTaGGCCCGTGGTGGCAATCTC +
Preference number: 5 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHPGCIQ*ARGGNL
Trigger: GAGATTGCCACCACGGGCCAACTGTATGCAGCCTGG...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp GCCATCCATGTCTCCGTAACAGGCCTCTCGTGGGGTCTGGATGGGATACCTCACCCAGGCTGCATACAGTaGGCCCGTGGTGGCAATCTC +
Preference number: 5 (lower is better)
Translates to: AIHVSVTGLSWGLDGIPHPGCIQ*ARGGNL
Trigger: GAGATTGCCACCACGGGCCAACTGTATGCAGCCTGG...GTGAGGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CAA 90 bp GCTGCATACAGTTGGCCCGTGGTGGCAATCTCTGCACCCCGCTCCTGGCAGTACAAGCGGCTGTGCTTATaGGGGAAGCCAGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AAYSWPVVAISAPRSWQYKRLCL*GKPVWL
Trigger: CAACCAGACTGGCTTCCCCAATAAGCACAGCCGCTT...GTACTGCCAGGAGCGGGGTGCAGAGATTGCCACCACGGGCCAACTGTATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CAA 90 bp TCAAATTCTAGGAGCGTCCTAGGGGCCTCTGCTGGGTCTTCTGGAGTGGAGCTTCCATCAGAGGCTGGGTaGGAGGCTGGGTTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SNSRSVLGASAGSSGVELPSEAG*EAGLEA
Trigger: GGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATGG...AAGCTCCACTCCAGAAGACCCAGCAGAGGCCCCTAGGACGCTCCTAGAATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp GTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGCTGCCAGGGAGAGTGGTCCATGGACCCTaGGAGGCCTGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: VGTVLPRGIEGTRWLPGRVVHGP*EAWKLL
Trigger: CAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCAC...TCTCCCTGGCAGCCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCGTGGTCCATGGACCCTaGGAGGCCTGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGVVHGP*EAWKLL
Trigger: CAGAAGCTTCCAGGCCTCCAAGGGTCCATGGACCAC...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp CTTCCTGTGGTGGCGGGAGCGCAGGGTGTGAGGGAAAATTTGGGTGACAGGGCACCAGCCAGCATCACATaGCTCATAGCCCCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LPVVAGAQGVRENLGDRAPASIT*LIAPKV
Trigger: TACCTTGGGGGCTATGAGCAATGTGATGCTGGCTGG...TGCCCTGTCACCCAAATTTTCCCTCACACCCTGCGCTCCCGCCACCACAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCCCAGCCAGCATCACATaGCTCATAGCCCCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRPASIT*LIAPKV
Trigger: TACCTTGGGGGCTATGAGCAATGTGATGCTGGCTGG...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS-3UTR CAA 90 bp TGGTTGGGGAAGAGGAAGAGAGTCTTGACACCAGGCAAGCCCCCACCACAGCGCAAGCGGCTGTGCTTATaGGGGAAGCCAGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: WLGKRKRVLTPGKPPPQRKRLCL*GKPVWL
Trigger: CAACCAGACTGGCTTCCCCAATAAGCACAGCCGCTT...GCGCTGTGGTGGGGGCTTGCCTGGTGTCAAGACTCTCTTCCTCTTCCCCAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479949.5
ENST00000491823.1
CDS-3UTR CAA 90 bp GATCACAGGGTAAAGACGCGGAGAGCTGAGATACCCACAAGGTGGATATCCGAGCCATCAGAGGCTGGGTaGGAGGCTGGGTTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: DHRVKTRRAEIPTRWISEPSEAG*EAGLEA
Trigger: GGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATGG...CTCGGATATCCACCTTGTGGGTATCTCAGCTCTCCGCGTCTTTACCCTGTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGCCTCCCCCACCTCTCTaGCCTCAACCAGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRPPPPL*PQPEWK
Trigger: CTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAGG...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp CTAAAGGGGACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTCCCCCACCTCTCTaGCCTCAACCAGAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LKGTAHRRMKGVVENRPSPPPPL*PQPEWK
Trigger: CTTCCACTCTGGTTGAGGCAAGAGAGGTGGGGGAGG...GCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGTCCCCTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGCCACCCCTCGTCATGTaGTCACTTCCTGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRPPLVM*SLPVVA
Trigger: CGCCACCACAGGAAGTGACAACATGACGAGGGGTGG...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GGACTCCCAGGCTTCCCTGAGATCAATAGGAGGCAGCTAAAGGGGACGGCACACAGAAAGACGACCCCTTaGACCTTGACCTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: GLPGFPEINRRQLKGTAHRKTTP*TLTSTA
Trigger: CGCTGTGGAGGTCAAGGTCAAAGGGGTCGTCTTTCT...GTGTGCCGTCCCCTTTAGCTGCCTCCTATTGATCTCAGGGAAGCCTGGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp ACGGCACACAGGCGGATGAAGGGAGTAGTGGAAAATAGGCCGAGCCCTGAAGGCAAGCGGCTGTGCTTATaGGGGAAGCCAGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TAHRRMKGVVENRPSPEGKRLCL*GKPVWL
Trigger: CAACCAGACTGGCTTCCCCAATAAGCACAGCCGCTT...GCCTTCAGGGCTCGGCCTATTTTCCACTACTCCCTTCATCCGCCTGTGTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS-3UTR CAA 90 bp AACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAAGATGGGCTCAGGACCACCAGTaGCCTCCCCCACCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: NPERVGTVLPRGIEGTRWAQDHQ*PPPPLL
Trigger: CAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAGC...CCATCTTGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GCTGGGCTGGAGCCTCCTAGGTATTTCCCAGAAGCCCCTTCAGGAACTGTCACCTCCCGGTACCGGTTGTaGATGAAGTCCTGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: AGLEPPRYFPEAPSGTVTSRYRL*MKSCSS
Trigger: CGAGGAACAGGACTTCATCAACAACCGGTACCGGGA...GGTGACAGTTCCTGAAGGGGCTTCTGGGAAATACCTAGGAGGCTCCAGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp CACATCATAGAGGTCATCCGGGTCCACCACACCATAGTTCCGGACCCCGGGGAAGAATGTCCTCCACCTTaGACCTTGACCTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: HIIEVIRVHHTIVPDPGEECPPP*TLTSTA
Trigger: CGCTGTGGAGGTCAAGGTCAAAGGTGGAGGACATTC...TTCCCCGGGGTCCGGAACTATGGTGTGGTGGACCCGGATGACCTCTATGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS TCA 90 bp AGTTGCAGGGCACGTCACTCCATTGTCCCTGATCATGCCACACCATaGCCACGCAGTTCTCTCCAGACAGGAAGTAGCTGTCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SCRARHSIVPDHATP*PRSSLQTGSSCQAA
Trigger: GGCAGCCTGACAGCTACTTCCTGTCTGGAGAGAACTGCGTGGTCATGGTGTGGCATGATCAGGGACAATGGAGTGACGTGCCCTGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS-3UTR CAA 90 bp AGGCACTTAGGGATTTACTCCGGCCCTGATGGAAGATCTGGTGCCCAGGGTAGGAAGCGGCTGTGCTTATaGGGGAAGCCAGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RHLGIYSGPDGRSGAQGRKRLCL*GKPVWL
Trigger: CAACCAGACTGGCTTCCCCAATAAGCACAGCCGCTT...CCTACCCTGGGCACCAGATCTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp CACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGTGGCGGGTGCAAGCCCATTCCCTaGGAAAACCCAGAAAGAGTG +
Preference number: 5 (lower is better)
Translates to: HLDSSTTPRHVVTSCGGGCKPIP*ENPERV
Trigger: CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCA...CCCGCCACCACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACAACGACCCCTTTGACCTaGACCTCCACAGCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: LENPERVGTVLPRGIEGTTTPLT*TSTASL
Trigger: CAGCGACGCTGTGGAGGTCAAGGTCAAAGGGGTCGT...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACACCAGGCTGCATACAGTaGGCCCGTGGTGGCAATCTC +
Preference number: 5 (lower is better)
Translates to: LENPERVGTVLPRGIEGTPGCIQ*ARGGNL
Trigger: GAGATTGCCACCACGGGCCAACTGTATGCAGCCTGG...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGTGCCATCAGAGGCTGGGTaGGAGGCTGGGTTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FTDTPSCKPIPLENPERVPSEAG*EAGLEA
Trigger: GGCCTCCAACCCAGCCTCCAACCCAGCCTCTGATGG...CACTCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp AGGAACTGTCACCTGGACTCCAGTACCACCCCTCGTCATGTTGTCACTTCCTGTGGGCACGTCACTCCATaGTCCCTGATCATGCCACAC +
Preference number: 5 (lower is better)
Translates to: RNCHLDSSTTPRHVVTSCGHVTP*SLIMPH
Trigger: GTGTGGCATGATCAGGGACAATGGAGTGACGTGCCC...ACAGGAAGTGACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GTGGGCGGTACCATGGATTGTGTTTCAAATTCTAGGAGCGTCCTAGGGGCCTCTGGGATACCTTTGACCTaGACCTCCACAGCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: VGGTMDCVSNSRSVLGASGIPLT*TSTASL
Trigger: CAGCGACGCTGTGGAGGTCAAGGTCAAAGGTATCCC...AGAGGCCCCTAGGACGCTCCTAGAATTTGAAACACAATCCATGGTACCGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp CGAGTCTCGGAAGCAGTAGACGTTGAAGCGGCTGTGCTTATTGGGGAAGCCAGTCTGGATGGGATACCTTaGACCTTGACCTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: RVSEAVDVEAAVLIGEASLDGIP*TLTSTA
Trigger: CGCTGTGGAGGTCAAGGTCAAAGGTATCCCATCCAG...ACTGGCTTCCCCAATAAGCACAGCCGCTTCAACGTCTACTGCTTCCGAGACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS-3UTR CAA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGCGGCACTGCGAAGTTaGTCGCCTCCTCCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LILQTLHPASPFPWKTQKAALRS*SPPPGV
Trigger: GACCCCCGGAGGAGGCGACAAACTTCGCAGTGCCGC...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGACAGGAAAGTCCACTaGACCCGCGGAGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: DFTDTPSCKPIPLENPERDRKVH*TRGEPS
Trigger: GCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGTC...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTTCCTGTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCGGATCAGCGGCAGATaGCGCTGGGCCAGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FPVDFTDTPSCKPIPLENRISGR*RWASPS
Trigger: GGAAGGACTGGCCCAGCGCAATCTGCCGCTGATCCG...GTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAACAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTGGAAAACCCAGAAAGAGTGGGCACAGTGCTCCCTAGAGGAATAGAGGGGACATACTCCCGGTACCGGTaGTTGATGAAGTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LENPERVGTVLPRGIEGTYSRYR*LMKSCS
Trigger: GGAACAGGACTTCATCAACAACCGGTACCGGGAGTA...TGTCCCCTCTATTCCTCTAGGGAGCACTGTGCCCACTCTTTCTGGGTTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGACCAACGACCGTTCTCTaGGCATCGGATCAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: DFTDTPSCKPIPLENPERPTTVL*ASDQRQ
Trigger: CTGCCGCTGATCCGATGCCAAGAGAACGGTCGTTGG...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GTTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAAAGACGACCCCTTaGACCTTGACCTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: VDFTDTPSCKPIPLENPERKTTP*TLTSTA
Trigger: CGCTGTGGAGGTCAAGGTCAAAGGGGTCGTCTTTCT...TTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp GATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAAGAGGTGTGAGGGAAAATTaGGGTGACAGGGCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: DFTDTPSCKPIPLENPERGVREN*GDRAVL
Trigger: CAGCACTGCCCTGTCACCCAAATTTTCCCTCACACC...TCTTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS-3UTR CAA 90 bp TTGATTTTACAGACACTCCATCCTGCAAGCCCATTCCCTTGGAAAACCCAGAAACCAGGGAGAGGGCAGTaGAGGCACTTAGGGATTTAC +
Preference number: 5 (lower is better)
Translates to: LILQTLHPASPFPWKTQKPGRGQ*RHLGIY
Trigger: GTAAATCCCTAAGTGCCTCAACTGCCCTCTCCCTGG...TTTCTGGGTTTTCCAAGGGAATGGGCTTGCAGGATGGAGTGTCTGTAAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS CCA 72 bp AGGGATGGTGAGGGCGCCGCCGAGCACGCCCTGCAGTaGCGCGTCGCCCGCGATGCGCACGCGAAAAGCGCG +
Preference number: 6 (lower is better)
Translates to: RDGEGAAEHALQ*RVARDAHAKSA
Trigger: CGCGCTTTTCGCGTGCGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTCGGCGGCGCCCTCACCATCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CCA 72 bp CCGACGGAGGTCGGAGAGCAGGGAGGTTGGAGGGATTaGAGGCGGCCCCCTGCACGGCGGCCCGGCCCACAC +
Preference number: 6 (lower is better)
Translates to: PTEVGEQGGWRD*RRPPARRPGPH
Trigger: GTGTGGGCCGGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCTCCGACCTCCGTCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 72 bp GCGGTGGCCGCAGGTAGTGGACGTGGCAAGGGATGGTaGGGGCGCCGCCGAGCACGCCCTGCAGTGGCGCGT +
Preference number: 6 (lower is better)
Translates to: AVAAGSGRGKGW*GRRRARPAVAR
Trigger: ACGCGCCACTGCAGGGCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCACGTCCACTACCTGCGGCCACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS TCA 72 bp CCTCTGCCTCCCGGCCCCGGGACAGGAAAGTCCACTTaGCCCGCGGAGAGCCCAGCACAGCCCGGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: PLPPGPGTGKST*PAESPAQPGGS
Trigger: CGAGCCGCCGGGCTGTGCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGTCCCGGGGCCGGGAGGCAGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp GCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTGACTaGCTTGGAAACCCTTCCCCGCGATCCAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: AAVPRSRAVCGD*LGNPSPRSSTR
Trigger: GCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 72 bp TGGAGGAGGCCGACGGAGGTCGGAGAGCAGGGAGGTTaGAGGGATTGGAGGCGGCCCCCTGCACGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: WRRPTEVGEQGG*RDWRRPPARRP
Trigger: GGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCTCCGACCTCCGTCGGCCTCCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 72 bp AGACGAAGGCGTGCAGTGAGCGCAGCCGCCAGCAGATaGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: RRRRAVSAAASR*RPFPAPGRSAV
Trigger: CACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTGGCGGCTGCGCTCACTGCACGCCTTCGTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 72 bp TGGGGCGCAGCTCGCTCAGCGCCAGGGAGACGTCGGTaGGCGACGCTGGGTACGCAGGCAGTGCCACGCGGA +
Preference number: 6 (lower is better)
Translates to: WGAARSAPGRRR*ATLGTQAVPRG
Trigger: TCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGGCGCTGAGCGAGCTGCGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp CGCCGAGCACGCCCTGCAGTGGCGCGTCGCCCGCGATaGGCACGCGAAAAGCGCGGTCCTCTGAGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: RRARPAVARRPR*AREKRGPLSCL
Trigger: GAGACAGCTCAGAGGACCGCGCTTTTCGCGTGCGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp TGGCAAGGGATGGTGAGGGCGCCGCCGAGCACGCCCTaGAGTGGCGCGTCGCCCGCGATGCGCACGCGAAAA +
Preference number: 6 (lower is better)
Translates to: WQGMVRAPPSTP*SGASPAMRTRK
Trigger: TTTTCGCGTGCGCATCGCGGGCGACGCGCCACTGCAGGGCGTGCTCGGCGGCGCCCTCACCATCCCTTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CAA 72 bp ACCTCTGCCTCCCGGCCCCGGGACAGGAAAGTCCACTaGACCCGCGGAGAGCCCAGCACAGCCCGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: TSASRPRDRKVH*TRGEPSTARRL
Trigger: GAGCCGCCGGGCTGTGCTGGGCTCTCCGCGGGTCAAGTGGACTTTCCTGTCCCGGGGCCGGGAGGCAGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CAA 72 bp GGCCAGGGCTGGGGTTGGGTCGCGGCACTGCGAAGTTaGTCGCCTCCTCCGGGGGTCTCCTCCGGGTGCACG +
Preference number: 6 (lower is better)
Translates to: GQGWGWVAALRS*SPPPGVSSGCT
Trigger: CGTGCACCCGGAGGAGACCCCCGGAGGAGGCGACAAACTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424639.5
ENST00000457777.6
CDS CAA 90 bp GAGTTGGAGTTGGAGGAGGCCGACGGAGGTCGGAGAGCAGGGAGGTaGGAGGGATTGGAGGCGGCCCCCTGCACGGCGGCCCGGCCCACA +
Preference number: 6 (lower is better)
Translates to: ELELEEADGGRRAGR*EGLEAAPCTAARPT
Trigger: TGTGGGCCGGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCTCCGACCTCCGTCGGCCTCCTCCAACTCCAACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 72 bp GATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTaGCTGCCTTGGAAACCCTTCCCCGCGATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DGGRSPLPGGLR*LPWKPFPAIQH
Trigger: GTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS GCA 72 bp AGAGCAGGGAGGTTGGAGGGATTGGAGGCGGCCCCCTaGACGGCGGCCCGGCCCACACAGGCGCACTCTACT +
Preference number: 6 (lower is better)
Translates to: RAGRLEGLEAAP*TAARPTQAHST
Trigger: AGTAGAGTGCGCCTGTGTGGGCCGGGCCGCCGTGCAGGGGGCCGCCTCCAATCCCTCCAACCTCCCTGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS GCA 72 bp CAGCAGATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTaGGGTGACTGCCTTGGAAACCCTTCCCCGCGATCC +
Preference number: 6 (lower is better)
Translates to: QQMAAVPRSRAV*GDCLGNPSPRS
Trigger: GGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 72 bp CTCGCTCAGCGCCAGGGAGACGTCGGTGAGCGACGCTaGGTACGCAGGCAGTGCCACGCGGAACCGGTAGGC +
Preference number: 6 (lower is better)
Translates to: LAQRQGDVGERR*VRRQCHAEPVG
Trigger: GCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCCCTGGCGCTGAGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CCA 72 bp CACCTGATGCGGGGACCACGGCCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCACTGGCTGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: HLMRGPRPLHLG*RCQWAALAGPA
Trigger: TGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGGCCGTGGTCCCCGCATCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS CAA 72 bp ACCCAGGGCTGGGGTTGGGTCGCGGCACTGCGAAGTTaGTCGCCTCCTCCGGGGGTCTCCTCCGGGTGCACG +
Preference number: 6 (lower is better)
Translates to: TQGWGWVAALRS*SPPPGVSSGCT
Trigger: CGTGCACCCGGAGGAGACCCCCGGAGGAGGCGACAAACTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329117.10
ENST00000441358.5
ENST00000479949.5
CDS CAA 72 bp GTCCACCTCATAGCGCAGCCGTGGGCGGCCGAACACTaGAGCCAGGGGCAGCTCCGGTGGCGGCCCACAGGA +
Preference number: 6 (lower is better)
Translates to: VHLIAQPWAAEH*SQGQLRWRPTG
Trigger: TCCTGTGGGCCGCCACCGGAGCTGCCCCTGGCTCAAGTGTTCGGCCGCCCACGGCTGCGCTATGAGGTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CAA 72 bp CCGTTCCCCGCTCCCGGGCGGTCTGCGGTGACTGCCTaGGAAACCCTTCCCCGCGATCCAGCACCCGCCCTT +
Preference number: 6 (lower is better)
Translates to: PFPAPGRSAVTA*ETLPRDPAPAL
Trigger: AAGGGCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CAA 90 bp CTGCAGGCTACCCAGGGCTGGGGTTGGGTCGCGGCACTGCGAAGTTaGTCGCCTCCTCCGGGGGTCTCCTCCGGGTGCACGGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: LQATQGWGWVAALRS*SPPPGVSSGCTAQS
Trigger: GGACTGAGCCGTGCACCCGGAGGAGACCCCCGGAGGAGGCGACAAACTTCGCAGTGCCGCGACCCAACCCCAGCCCTGGGTAGCCTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329117.10
ENST00000441358.5
ENST00000479949.5
CDS CAA 90 bp AGATGGCGGCCGTTCCCCGCTCCCGGGCGGTCTGCGGTGACTGCCTaGGAAACCCTTCCCCGCGATCCAGCACCCGCCCTTGTCGGGTTC +
Preference number: 6 (lower is better)
Translates to: RWRPFPAPGRSAVTA*ETLPRDPAPALVGF
Trigger: GAACCCGACAAGGGCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGGCAGTCACCGCAGACCGCCCGGGAGCGGGGAACGGCCGCCATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CAA 90 bp AAGCACAGTGTCCACCTCATAGCGCAGCCGTGGGCGGCCGAACACTaGAGCCAGGGGCAGCTCCGGTGGCGGCCCACAGGACACCAGCCC +
Preference number: 6 (lower is better)
Translates to: KHSVHLIAQPWAAEH*SQGQLRWRPTGHQP
Trigger: GGGCTGGTGTCCTGTGGGCCGCCACCGGAGCTGCCCCTGGCTCAAGTGTTCGGCCGCCCACGGCTGCGCTATGAGGTGGACACTGTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS TCA 72 bp GCAGTGCCACGCGGAACCGGTAGGCCTCGTTCACCTTaGCGCGCACTCCCCGCGCCACCAGCACCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: AVPRGTGRPRSP*RALPAPPAPLP
Trigger: AGGCAGAGGTGCTGGTGGCGCGGGGAGTGCGCGTCAAGGTGAACGAGGCCTACCGGTTCCGCGTGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp CTGCACGGCGGCCCGGCCCACACAGGCGCACTCTACTaGGCGAACCTCCACTCTCCGTTCCCGAAGGCCACT +
Preference number: 6 (lower is better)
Translates to: LHGGPAHTGALY*ANLHSPFPKAT
Trigger: AGTGGCCTTCGGGAACGGAGAGTGGAGGTTCGCGCAGTAGAGTGCGCCTGTGTGGGCCGGGCCGCCGTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 72 bp TGGGCGGCCGAACACTTGAGCCAGGGGCAGCTCCGGTaGCGGCCCACAGGACACCAGCCCCATCTTGCAGGT +
Preference number: 6 (lower is better)
Translates to: WAAEHLSQGQLR*RPTGHQPHLAG
Trigger: ACCTGCAAGATGGGGCTGGTGTCCTGTGGGCCGCCACCGGAGCTGCCCCTGGCTCAAGTGTTCGGCCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CCA 72 bp TACCTGATGCGGGGACCACGGCCACTCCACCTCGGCTaGCGCTGTCAGTGGGCAGCACTGGCTGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: YLMRGPRPLHLG*RCQWAALAGPA
Trigger: TGCAGGCCCAGCCAGTGCTGCCCACTGACAGCGCCAGCCGAGGTGGAGTGGCCGTGGTCCCCGCATCAGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS TCA 72 bp GCTGCAGCTGAGACTGCGGCGGAGACTGCGCGAGCGTaGGGAGAGGCTGGGGCCGCAGGACATTCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: AAAETAAETARA*GEAGAAGHSEE
Trigger: CTCTTCCGAATGTCCTGCGGCCCCAGCCTCTCCTCACGCTCGCGCAGTCTCCGCCGCAGTCTCAGCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000457777.6
CDS TCA 72 bp TCCTCCGGGTGCACGGCTCAGTCCTGCAGCTGCAGCTaGGACTGCGGCGGAGACTGCGCGAGCGTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: SSGCTAQSCSCS*DCGGDCASVRR
Trigger: TCTCCTCACGCTCGCGCAGTCTCCGCCGCAGTCTCAGCTGCAGCTGCAGGACTGAGCCGTGCACCCGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329117.10
ENST00000424639.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp ACAGGGCAGTGCTGTGGCCGGCAGTGTTCAAGGCCTTaGCCCCTAGGGACCTGGCATGGGGCTGGAAGGGGG +
Preference number: 6 (lower is better)
Translates to: TGQCCGRQCSRP*PLGTWHGAGRG
Trigger: CCCCCTTCCAGCCCCATGCCAGGTCCCTAGGGGGCAAGGCCTTGAACACTGCCGGCCACAGCACTGCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CAA 72 bp GACAGGGCAGTGCTGTGGCCGGCAGTGTTCAAGGCCTaGCCCCCTAGGGACCTGGCATGGGGCTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: DRAVLWPAVFKA*PPRDLAWGWKG
Trigger: CCCCTTCCAGCCCCATGCCAGGTCCCTAGGGGGCAAGGCCTTGAACACTGCCGGCCACAGCACTGCCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS GCA 72 bp GGAGACGTCGGTGAGCGACGCTGGGTACGCAGGCAGTaGCACGCGGAACCGGTAGGCCTCGTTCACCTTGAC +
Preference number: 6 (lower is better)
Translates to: GDVGERRWVRRQ*HAEPVGLVHLD
Trigger: GTCAAGGTGAACGAGGCCTACCGGTTCCGCGTGGCACTGCCTGCGTACCCAGCGTCGCTCACCGACGTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CCA 72 bp CGTGCTGGACCTCACAGCGATAGATACCTGAGTCGTTaGGGCGCAGCTCGCTCAGCGCCAGGGAGACGTCGG +
Preference number: 6 (lower is better)
Translates to: RAGPHSDRYLSR*GAARSAPGRRR
Trigger: CCGACGTCTCCCTGGCGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGTGAGGTCCAGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS CCA 72 bp CCTCCTCCAAGCATGTCCCACCATTGTGGCAGGGGCTaGGGACACAGTCACCTGATGCGGGGACCACGGCCA +
Preference number: 6 (lower is better)
Translates to: PPPSMSHHCGRG*GHSHLMRGPRP
Trigger: TGGCCGTGGTCCCCGCATCAGGTGACTGTGTCCCCAGCCCCTGCCACAATGGTGGGACATGCTTGGAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329117.10
CDS GCA 72 bp AAGTCCTGTTCCTCGGGTGTGCTGATGCTGGCCAGATaGGCGCCGTACATCCGGCACTGGGTCTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: KSCSSGVLMLAR*APYIRHWVSAS
Trigger: GGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGCACACCCGAGGAACAGGACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CCA 72 bp CTGATGCTGGCCAGATGCGCGCCGTACATCCGGCACTaGGTCTCTGCCTCCTCCCAGCTCCTTCGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: LMLARCAPYIRH*VSASSQLLRVE
Trigger: TTCCACACGAAGGAGCTGGGAGGAGGCAGAGACCCAGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CCA 72 bp AGAGCTCGGGCAGGTCTTCTGGGCACACAGGAGATCTaGGGGGCCTCCCAACGACCGTTCTCTTGGCATCGG +
Preference number: 6 (lower is better)
Translates to: RARAGLLGTQEI*GASQRPFSWHR
Trigger: CCGATGCCAAGAGAACGGTCGTTGGGAGGCCCCCCAGATCTCCTGTGTGCCCAGAAGACCTGCCCGAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CAA 72 bp CCTTGGAAACCCTTCCCCGCGATCCAGCACCCGCCCTaGTCGGGTTCTTCTACCCCAGCCTCTGCTCAAGGG +
Preference number: 6 (lower is better)
Translates to: PWKPFPAIQHPP*SGSSTPASAQG
Trigger: CCCTTGAGCAGAGGCTGGGGTAGAAGAACCCGACAAGGGCGGGTGCTGGATCGCGGGGAAGGGTTTCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CAA 90 bp GAGCATATGGCAGGGGCCCCTCCCGCCCTGTCTCCCAGCCCACTGTaGATGAAGTCCTGTTCCTCGGGTGTGCTGATGCTGGCCAGATGC +
Preference number: 6 (lower is better)
Translates to: EHMAGAPPALSPSPL*MKSCSSGVLMLARC
Trigger: GCATCTGGCCAGCATCAGCACACCCGAGGAACAGGACTTCATCAACAGTGGGCTGGGAGACAGGGCGGGAGGGGCCCCTGCCATATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS TCA 72 bp ATCGATGCCGTGCTGGACCTCACAGCGATAGATACCTaGGTCGTTGGGGCGCAGCTCGCTCAGCGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: IDAVLDLTAIDT*VVGAQLAQRQG
Trigger: TCCCTGGCGCTGAGCGAGCTGCGCCCCAACGACTCAGGTATCTATCGCTGTGAGGTCCAGCACGGCATCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329117.10
ENST00000361588.5
ENST00000441358.5
ENST00000457777.6
ENST00000479949.5
CDS GCA 72 bp AACGACCGTTCTCTTGGCATCGGATCAGCGGCAGATTaGGCTGGGCCAGTCCTTCCCGGCACCGGTAGCGAA +
Preference number: 6 (lower is better)
Translates to: NDRSLGIGSAAD*AGPVLPGTGSE
Trigger: TTCGCTACCGGTGCCGGGAAGGACTGGCCCAGCGCAATCTGCCGCTGATCCGATGCCAAGAGAACGGTCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS TCA 72 bp TCCTCCGGGTGCACGGCTCAGTCCTGCAGCTGCAGCTaGGACTGCGGCGGAGACAGTCATGCAAACCAATGT +
Preference number: 6 (lower is better)
Translates to: SSGCTAQSCSCS*DCGGDSHANQC
Trigger: ACATTGGTTTGCATGACTGTCTCCGCCGCAGTCTCAGCTGCAGCTGCAGGACTGAGCCGTGCACCCGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441358.5
CDS GCA 72 bp CTGCGCGAACCTCCACTCTCCGTTCCCGAAGGCCACTaGCTAAGCGTAGGGTGGGAAGGGAGAGAGAATGAG +
Preference number: 6 (lower is better)
Translates to: LREPPLSVPEGH*LSVGWEGRENE
Trigger: CTCATTCTCTCTCCCTTCCCACCCTACGCTTAGGCAGTGGCCTTCGGGAACGGAGAGTGGAGGTTCGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496038.1
CDS CCA 72 bp GGGGAAGCCATCCATGTCTCCGTAACAGGCCTCTCGTaGGGTCTGGATGGGATACCTTTGACCTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: GEAIHVSVTGLS*GLDGIPLTLTS
Trigger: GGAGGTCAAGGTCAAAGGTATCCCATCCAGACCCCACGAGAGGCCTGTTACGGAGACATGGATGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479949.5
CDS TCA 72 bp GCACGTCACTCCATTGTCCCTGATCATGCCACACCATaGCCACGCAGTTCTCTCCAGACAGGAAGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: ARHSIVPDHATP*PRSSLQTGSSC
Trigger: ACAGCTACTTCCTGTCTGGAGAGAACTGCGTGGTCATGGTGTGGCATGATCAGGGACAATGGAGTGACGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329117.10
ENST00000496038.1
CDS CCA 72 bp AAGAAAAGGAGTAGGATAGAGAGGGCAGTTGAGCCTTaGGCAGAATTACCTGATGCGGGGACCACGGCCACT +
Preference number: 6 (lower is better)
Translates to: KKRSRIERAVEP*AELPDAGTTAT
Trigger: AGTGGCCGTGGTCCCCGCATCAGGTAATTCTGCCCAAGGCTCAACTGCCCTCTCTATCCTACTCCTTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361588.5
CDS CAA 72 bp GTTAGATTGTGGGTAGAATGTCCTCCACCTTTGACCTaGACCTCCACAGCGTCGCTGCTGTCATCGATGCCG +
Preference number: 6 (lower is better)
Translates to: VRLWVECPPPLT*TSTASLLSSMP
Trigger: CGGCATCGATGACAGCAGCGACGCTGTGGAGGTCAAGGTCAAAGGTGGAGGACATTCTACCCACAATCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491823.1
CDS CAA 72 bp AAAGAGTCAAAACTTTCAACAAGATTGGAGTTGGAGTaGGAGGAGGCCGACGGAGGTCGGAGAGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: KESKLSTRLELE*EEADGGRRAGR
Trigger: CCTCCCTGCTCTCCGACCTCCGTCGGCCTCCTCCAACTCCAACTCCAATCTTGTTGAAAGTTTTGACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496038.1