RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BBX (Homo sapiens)

Ensembl gene IDs: ENSG00000114439

Ensembl transcript IDs: ENST00000325805.13, ENST00000402163.6, ENST00000402543.5, ENST00000406780.5, ENST00000413213.5, ENST00000415149.6, ENST00000416476.6, ENST00000427402.5, ENST00000429270.1, ENST00000431630.5, ENST00000443253.1, ENST00000449213.5, ENST00000449271.5, ENST00000449335.5, ENST00000454540.5, ENST00000456419.5, ENST00000456817.5, ENST00000457496.5, ENST00000458347.1, ENST00000458458.5, ENST00000472032.1, ENST00000474137.1, ENST00000485939.5, ENST00000497629.1

Found 937 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGG +
Preference number: 1 (lower is better)
Translates to: LLQVNLGRVGQQALV*SLYFPPLGLTSIPR
Trigger: CCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR GCA 90 bp GGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTCTCTGGAACAGGCTTTTTAATATTT +
Preference number: 1 (lower is better)
Translates to: GPRGRAYTTNNGTSA*PGCLGVSGTGFLIF
Trigger: AAATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR GCA 90 bp CAATTTCCTTCCTTTTCCCAGATGAAGTGGTGGGTGCTTCTCCTTTaGTGTATGGAATGCCATCCTCCAGCCTCCAGCTGCTCGTCTTCA +
Preference number: 1 (lower is better)
Translates to: QFPSFSQMKWWVLLL*CMECHPPASSCSSS
Trigger: TGAAGACGAGCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAGGAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 90 bp TTTTCCCAGATGAAGTGGTGGGTGCTTCTCCTTTGCTGTATGGAATaGCATCCTCCAGCCTCCAGCTGCTCGTCTTCAGAACATTTACGA +
Preference number: 1 (lower is better)
Translates to: FSQMKWWVLLLCCME*HPPASSCSSSEHLR
Trigger: TCGTAAATGTTCTGAAGACGAGCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CCA 90 bp CAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGT +
Preference number: 1 (lower is better)
Translates to: QITLPSKILGSERTN*PRMLTSASSESGPC
Trigger: ACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR GCA 90 bp TCAGTACCTCCTAAACAACACAAACTCAAAATGGCTCTAAAAACCTaGAGTGCCAATCAGGCTGTGCATAGCAATTGCAACCCGTCCAGC +
Preference number: 1 (lower is better)
Translates to: SVPPKQHKLKMALKT*SANQAVHSNCNPSS
Trigger: GCTGGACGGGTTGCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAGTTTGTGTTGTTTAGGAGGTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 90 bp CAACACTCCTCTCCAGCAGTTTCAGGGCATGAGAAGCACAATTATTaGAATCAAGACTTTACTCAGAGAATCGACAAGGTGAGTCTAAGG +
Preference number: 1 (lower is better)
Translates to: QHSSPAVSGHEKHNY*NQDFTQRIDKVSLR
Trigger: CCTTAGACTCACCTTGTCGATTCTCTGAGTAAAGTCTTGATTTCAATAATTGTGCTTCTCATGCCCTGAAACTGCTGGAGAGGAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 90 bp GTTAGAGCTTGTGAGGTAAGATTTGCATTGTGGGTGGAAGAGTTTTaGGGCATTGAATTAGATCCTTGTTACTCAGTAACCACCTCTGGC +
Preference number: 1 (lower is better)
Translates to: VRACEVRFALWVEEF*GIELDPCYSVTTSG
Trigger: GCCAGAGGTGGTTACTGAGTAACAAGGATCTAATTCAATGCCTCAAAACTCTTCCACCCACAATGCAAATCTTACCTCACAAGCTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 90 bp GTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAATATTTaGCACAATTTGCCTCAAGCAAATTCTTCTTGGTCACTCAAGGCT +
Preference number: 1 (lower is better)
Translates to: VICNLQDSSPVWENI*HNLPQANSSWSLKA
Trigger: AGCCTTGAGTGACCAAGAAGAATTTGCTTGAGGCAAATTGTGGCAAATATTTTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR TCA 90 bp ATGAAACTAGTTTCACACTCTCTGGTTGGTAAAAGAGATGCTGGGTaGGCTACAGTAAAGGCAGCCTTTTACCAAGTTACCACCTATTAC +
Preference number: 1 (lower is better)
Translates to: MKLVSHSLVGKRDAG*ATVKAAFYQVTTYY
Trigger: GTAATAGGTGGTAACTTGGTAAAAGGCTGCCTTTACTGTAGCTCACCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAACTAGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR TCA 90 bp TTTGGTTTGCTTGAGATATATATAAGGTGCAACAACTTTTTCTCTTaGGGATGCTGTGGGACAAATGTTAGTGTAGATGGTATCTGCTGG +
Preference number: 1 (lower is better)
Translates to: FGLLEIYIRCNNFFS*GCCGTNVSVDGICW
Trigger: CCAGCAGATACCATCTACACTAACATTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTTGCACCTTATATATATCTCAAGCAAACCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTTGCAGGTGGATCTATaGCTGAGAGTCCCACTCTGG +
Preference number: 2 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFLQVDL*LRVPLW
Trigger: CCAGAGTGGGACTCTCAGTCATAGATCCACCTGCAA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 90 bp GCAATTTCCTTCCTTTTCCCAGATGAAGTGGTGGGTGCTTCTCCTTaGCTGTATGGAATGCCATCCTCCAGCCTCCAGCTGCTCGTCTTC +
Preference number: 2 (lower is better)
Translates to: AISFLFPDEVVGASP*LYGMPSSSLQLLVF
Trigger: GAAGACGAGCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAGGAAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTC +
Preference number: 2 (lower is better)
Translates to: LKMALKTCSANQAVHSNCNGTSA*PGCLGV
Trigger: GACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATT...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTAGCACATCATTCCGATaGTTTGCTACCCTCTTTACC +
Preference number: 2 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFSTSFR*FATLFT
Trigger: GGTAAAGAGGGTAGCAAAGCATCGGAATGATGTGCT...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTATCACTGCTAGCGAGTaGTCCAAAACTCCAACAGCC +
Preference number: 2 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLITASE*SKTPTA
Trigger: GGCTGTTGGAGTTTTGGACCACTCGCTAGCAGTGAT...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 90 bp GTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTCCACCACTaGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTA +
Preference number: 2 (lower is better)
Translates to: VWGNKHLFAVYIFHH*DSLASLGKDKARVV
Trigger: TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR CAA 90 bp CTGAGAGCAAGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTaGCTGAGCCAGTTGCTGAGCTCCAGATCGCAAACCTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: LRARDLFSANEMEKT*LSQLLSSRSQTFPT
Trigger: GGTAGGGAAGGTTTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCTTGCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGNFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAKDSGF*ENKLAQ
Trigger: CTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTT...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTCATCTCCAGTAAGTTaGCCTCCCACCCCCAACCCT +
Preference number: 2 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLSSPVS*PPTPNP
Trigger: AGGGTTGGGGGTGGGAGGGCAACTTACTGGAGATGA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTGGCTCCAGGCCTCCTaGAATTTCCTTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLWLQAS*NFLPFP
Trigger: GGGAAAAGGAAGGAAATTGCAGGAGGCCTGGAGCCA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAAAGTGCAGAATATATaGACCACGAGGCCGAGCATA +
Preference number: 2 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEKVQNI*TTRPSI
Trigger: TATGCTCGGCCTCGTGGTCCATATATTCTGCACTTT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVINFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAACTTCCTTTTCCCAGATaGAGTGGTGGGTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: HGMFTPTLKRTKPISESKLPFPR*SGGCFS
Trigger: GGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAG...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 2 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 2 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGTGCCAATCAGGCTGTaGATAGCAATTGCAACCCGT +
Preference number: 2 (lower is better)
Translates to: HGMFTPTLKRTKPISESKVPIRL*IAIATR
Trigger: ACGGGTTGCAATTGCTATGCACAGCCTGATTGGCAC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCTTTGCTGTATGGAATaGCATCCTCCAGCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVILCCME*HPPASS
Trigger: GCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCT +
Preference number: 2 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSERTN*PRMLTS
Trigger: AGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACAAGCAAATTCTTCTTaGTCACTCAAGGCTAAGAAA +
Preference number: 2 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEQANSS*SLKAKK
Trigger: TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR-3UTR TCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTTCCAGCACCGGAACTaGAGTAATATCTACAACCAT +
Preference number: 2 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLFQHRN*SNIYNH
Trigger: ATGGTTGTAGATATTACTTCAGTTCCGGTGCTGGAA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCCAGACCAGTTCAGATaGTCCTTTTTGTTCATAGTG +
Preference number: 2 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLPDQFR*SFLFIV
Trigger: CACTATGAACAAAAAGGAGCATCTGAACTGGTCTGG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCAAGTCCACATGAAGTaGGTGTCTTCAATGTGTTTA +
Preference number: 2 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLQVHMK*VSSMCL
Trigger: TAAACACATTGAAGACACTCACTTCATGTGGACTTG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCAGTCCATCAAACCCTaGATACTTCGCCAGACACAT +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVIQSIKP*ILRQTH
Trigger: ATGTGTCTGGCGAAGTATTCAGGGTTTGATGGACTG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 2 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCAGCATGGTCCCACTaGTTCACATTAATGTCAAAT +
Preference number: 2 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAAWSH*FTLMSN
Trigger: ATTTGACATTAATGTGAAGCAGTGGGACCATGCTGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAAGCAGTTTCAGGGCATaGGAAGCACAATTATTGAAA +
Preference number: 2 (lower is better)
Translates to: HGMFTPTLKRTKPISESKSSFRA*EAQLLK
Trigger: TTTCAATAATTGTGCTTCTCATGCCCTGAAACTGCT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTATCATTCCGATGCTTTaGTACCCTCTTTACCTGCTT +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVIIIPML*YPLYLL
Trigger: AAGCAGGTAAAGAGGGTAGCAAAGCATCGGAATGAT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTAAGGCTAAAGAAAACTaGAACAGTACTGCGTCTCCA +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVIKAKEN*NSTASP
Trigger: TGGAGACGCAGTACTGTTCCAGTTTTCTTTAGCCTT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTAGTGTAGATGGTATCTaGTGGCAGATTAAAGTACAC +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVISVDGI*WQIKVH
Trigger: GTGTACTTTAATCTGCCAGCAGATACCATCTACACT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATGTAACAACAGCATTTaGTTCTACTGCCCATTTTCA +
Preference number: 2 (lower is better)
Translates to: HGMFTPTLKRTKPISESKCNNSI*FYCPFS
Trigger: TGAAAATGGGCAGTAGAAGCAAATGCTGTTGTTACA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 90 bp GCTATAGAACAAATACCCTGTAAAATCTGTAGCCTCAGACTAATTTaGATTTATCACTTTGCATCTGTTGCTAGGAAACAAGACACTGTG +
Preference number: 2 (lower is better)
Translates to: AIEQIPCKICSLRLI*IYHFASVARKQDTV
Trigger: CACAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTGATAAATCAAAATTAGTCTGAGGCTACAGATTTTACAGGGTATTTGTTCTATAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTTTCTGACAAATTCCTaGGAGCAAGAGACTTGTTTA +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVIFLTNS*EQETCL
Trigger: TAAACAAGTCTCTTGCTCTCAGGAATTTGTCAGAAA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCAAGCAAATTCTTCTTaGTCACTCAAGGCTAAGAAA +
Preference number: 2 (lower is better)
Translates to: NSNLREEFIIWYVESQVIQANSS*SLKAKK
Trigger: TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGCCTGCCCAGGCTGCTaGGGAGTCTCTGGAACAGGC +
Preference number: 3 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFACPGC*GVSGTG
Trigger: GCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 72 bp GGCCGAGCATACACCACTAACAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTCTCTGGAACAGGCTTT +
Preference number: 3 (lower is better)
Translates to: GRAYTTNNGTSA*PGCLGVSGTGF
Trigger: AAAGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR GCA 72 bp TCCTTTTCCCAGATGAAGTGGTGGGTGCTTCTCCTTTaGTGTATGGAATGCCATCCTCCAGCCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SFSQMKWWVLLL*CMECHPPASSC
Trigger: GCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 72 bp ATGAAGTGGTGGGTGCTTCTCCTTTGCTGTATGGAATaGCATCCTCCAGCCTCCAGCTGCTCGTCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: MKWWVLLLCCME*HPPASSCSSSE
Trigger: TTCTGAAGACGAGCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTTTCACACTCTCTGGTaGGTAAAAGAGATGCTGGGT +
Preference number: 3 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFFHTLW*VKEMLG
Trigger: ACCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 72 bp AACAAACTGGCCCAGGATGCTAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGCAACAAGCACTTGTTT +
Preference number: 3 (lower is better)
Translates to: NKLAQDANFCFK*IWAVWGNKHLF
Trigger: AAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCTGGGCCAGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR TCA 72 bp CAACAGCATCACACCCCGCAACATCCCCTTTACAAATaGTGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: QQHHTPQHPLYK*WLQASCNFLPF
Trigger: AAAAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCGGGGTGTGATGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 72 bp GTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCACTTGGACTCACTAGC +
Preference number: 3 (lower is better)
Translates to: VNLGRVGQQALV*SLYFPPLGLTS
Trigger: GCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 3 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CCA 72 bp CTCCTGCAATTTCCTTCCTTTTCCCAGATGAAGTGGTaGGTGCTTCTCCTTTGCTGTATGGAATGCCATCCT +
Preference number: 3 (lower is better)
Translates to: LLQFPSFSQMKW*VLLLCCMECHP
Trigger: AGGATGGCATTCCATACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAGGAAATTGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTAATCCTGTTAGTATGTaGTACATATTTTCCAGCACC +
Preference number: 3 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFNPVSM*YIFSST
Trigger: GGTGCTGGAAAATATGTACAACATACTAACAGGATT...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 72 bp CAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAGGATGCTAACTTCTGC +
Preference number: 3 (lower is better)
Translates to: QTDNLTLKDSGF*ENKLAQDANFC
Trigger: GCAGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR GCA 72 bp AAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTaGAACCCGTCCAGCCAATCTGTGATGGATGTAAAA +
Preference number: 3 (lower is better)
Translates to: KTCSANQAVHSN*NPSSQSVMDVK
Trigger: TTTTACATCCATCACAGATTGGCTGGACGGGTTGCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 72 bp TACACCACTAACAATGGTACATCTGCCTGCCCAGGCTaGTTGGGAGTCTCTGGAACAGGCTTTTTAATATTT +
Preference number: 3 (lower is better)
Translates to: YTTNNGTSACPG*LGVSGTGFLIF
Trigger: AAATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
3UTR CCA 72 bp TTACCCTCAAAGATTCTGGGTTCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCTGCTTCAAGTGAATCT +
Preference number: 3 (lower is better)
Translates to: LPSKILGSERTN*PRMLTSASSES
Trigger: AGATTCACTTGAAGCAGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTTGAGGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR CCA 72 bp TTAGCTAATTATAATCTTCAAATCACTGCTAGCGAGTaGTCCAAAACTCCAACAGCCACCAACATCGGGACC +
Preference number: 3 (lower is better)
Translates to: LANYNLQITASE*SKTPTATNIGT
Trigger: GGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGCAGTGATTTGAAGATTATAATTAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGCAACAAGCACTTGTTaGCAGTCTATATTTTCCACC +
Preference number: 3 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGATSTC*QSIFST
Trigger: GGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
3UTR-3UTR CAA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAAGCCAGTTAATCCACTaGGCGCTGCTTATGTATGGT +
Preference number: 3 (lower is better)
Translates to: HGMFTPTLKRTKPISESKSQLIH*ALLMYG
Trigger: ACCATACATAAGCAGCGCCAAGTGGATTAACTGGCT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 72 bp AAGATTTGCATTGTGGGTGGAAGAGTTTTGAGGCATTaGATTAGATCCTTGTTACTCAGTAACCACCTCTGG +
Preference number: 3 (lower is better)
Translates to: KICIVGGRVLRH*IRSLLLSNHLW
Trigger: CCAGAGGTGGTTACTGAGTAACAAGGATCTAATTCAATGCCTCAAAACTCTTCCACCCACAATGCAAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR GCA 72 bp ACTCTAGTGAAATGTAATCGGAGGACTGAAGGAGGGTaGTCTGGCAAAAATAGATCTATTCTAACGTGTTCT +
Preference number: 3 (lower is better)
Translates to: TLVKCNRRTEGG*SGKNRSILTCS
Trigger: AGAACACGTTAGAATAGATCTATTTTTGCCAGAGCACCCTCCTTCAGTCCTCCGATTACATTTCACTAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CCA 72 bp CACAATGATAACGTGGGAATTATTTTAACATGGCTTTaGGACATGGCATCGGTAGAAAGCTCATCTGACAGA +
Preference number: 3 (lower is better)
Translates to: HNDNVGIILTWL*DMASVESSSDR
Trigger: TCTGTCAGATGAGCTTTCTACCGATGCCATGTCCCAAAGCCATGTTAAAATAATTCCCACGTTATCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCTGAGAGCAAGAGACTaGTTTAGTGCTAATGAAATG +
Preference number: 3 (lower is better)
Translates to: NSNLREEFIIWYVESQVILRARD*FSANEM
Trigger: CATTTCATTAGCACTAAACAAGTCTCTTGCTCTCAG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 72 bp AAAATAACAACACTCCTCTCCAGCAGTTTCAGGGCATaGGAAGCACAATTATTGAAATCAAGACTTTACTCA +
Preference number: 3 (lower is better)
Translates to: KITTLLSSSFRA*EAQLLKSRLYS
Trigger: TGAGTAAAGTCTTGATTTCAATAATTGTGCTTCTCATGCCCTGAAACTGCTGGAGAGGAGTGTTGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR TCA 72 bp CTTGAGATATATATAAGGTGCAACAACTTTTTCTCTTaGGGATGCTGTGGGACAAATGTTAGTGTAGATGGT +
Preference number: 3 (lower is better)
Translates to: LEIYIRCNNFFS*GCCGTNVSVDG
Trigger: ACCATCTACACTAACATTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTTGCACCTTATATATATCTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CCA 72 bp TTCTGTTGTACCATTAAGTGGAAATCATTTATTACATaGCATGTTTACACCAACTCTAAAGAGAACCAAGCC +
Preference number: 3 (lower is better)
Translates to: FCCTIKWKSFIT*HVYTNSKENQA
Trigger: GGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATGTAATAAATGATTTCCACTTAATGGTACAACAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTAGCCCACCCCTCTGGTaGGCCACAGAGCGAAATCAG +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQASPPLW*ATERNQ
Trigger: CTGATTTCGCTCTGTGGCCCACCAGAGGGGTGGGCT...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGCTTCCCTTGCCACTTaGGGATGTGCGGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAASLAT*GCADLL
Trigger: AAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCAGGAGTCAGGGGACATaGGCCCACCCCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSARSQGT*AHPSGG
Trigger: CCCACCAGAGGGGTGGGCTCATGTCCCCTGACTCCT...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACTCGCGGAGCCGCTCTaGCTCCGCTTCACTGTACAC +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVLAEPL*LRFTVH
Trigger: GTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGCATTTCTGGAGTACTaGTCCGCGTCTCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFAFLEY*SASPRP
Trigger: AGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGCCCACCCCTCTGGTaGGCCACAGAGCGAAATCAG +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPASPPLW*ATERNQ
Trigger: CTGATTTCGCTCTGTGGCCCACCAGAGGGGTGGGCT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAGSLLW*FIIFSF
Trigger: GAAACTGAAGATGATGAATCACCAGAGCAGCGAGCC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTSLGCS*RTRERW
Trigger: CCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCATGGGTGAGCGGAGTTaGCCTCTGACCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAMGERS*PLTSVH
Trigger: GTGCACAGAGGTCAGAGGTCAACTCCGCTCACCCAT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGCCCCAGTCTCCTTTTaGGACGGCTTCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAAPVSF*DGFNGI
Trigger: TATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTATGTGCGGACCTTCTTaGGAGGGGTATCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAMCGPS*EGYLQV
Trigger: AACTTGGAGATACCCCTCGCAAGAAGGTCCGCACAT...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTCACGGCAGGCATTTCTaGAGTACTGCTCCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTHGRHF*STAPRL
Trigger: GAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTG...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACCTGCCCAGGCTGCTTaGGAGTCTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVPAQAA*ESLEQA
Trigger: AGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGTACTGCTAGAGGCTTaGGGTCTTCCTGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAVLLEA*GLPEGA
Trigger: GGCACCCTCAGGAAGACCCCAAGCCTCTAGCAGTAC...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFAWQVS*RVRWEG
Trigger: GCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTAGAGTGGGACGTACTTaGAGATATCTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQARVGRT*RYLGKL
Trigger: CAGTTTGCCGAGATATCTTCAAGTACGTCCCACTCT...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAAGTACCTCCTGCTGGTaGTACCCGGCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVSTSCW*YPAICC
Trigger: ACAGCAGATGGCCGGGTATCACCAGCAGGAGGTACT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGATGGGTGAGCGGAGTTaGCCTCTGACCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLMGERS*PLTSVH
Trigger: GTGCACAGAGGTCAGAGGTCAACTCCGCTCACCCAT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCACTGTCCTCAGGCTTaGCCTGTCCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLHCPQA*PVLIGW
Trigger: CCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTCCTGCCCAGGCTGCTTaGGAGTCTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPPAQAA*ESLEQA
Trigger: AGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGG...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTTCTCCTTTGCTGTATaGAATGCCATCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAFSFAV*NAILQP
Trigger: AGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCATGAGCCCACCCCTCTaGTGGGCCACAGAGCGAAAT +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACMSPPL*WATERN
Trigger: ATTTCGCTCTGTGGCCCACCAGAGGGGTGGGCTCAT...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTATGAGCCCACCCCTCTaGTGGGCCACAGAGCGAAAT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCMSPPL*WATERN
Trigger: ATTTCGCTCTGTGGCCCACCAGAGGGGTGGGCTCAT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAGTACCTCCTGCTGGTaGTACCCGGCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWESTSCW*YPAICC
Trigger: ACAGCAGATGGCCGGGTATCACCAGCAGGAGGTACT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLNFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAGGAGTCAGGGGACATaGGCCCACCCCTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGRSQGT*AHPSGG
Trigger: CCCACCAGAGGGGTGGGCTCATGTCCCCTGACTCCT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCGGTCTCCGGGCTCGCTaGTCTGGTGATTCATCATCT +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACGLRAR*SGDSSS
Trigger: AGATGATGAATCACCAGAGCAGCGAGCCCGGAGACC...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCATCAGGCCTGCATGTaGCAGAGGATACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACHQACM*QRIPLV
Trigger: CACCAGAGGTATCCTCTGGCACATGCAGGCCTGATG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTGCCAGGCACATCTCTaGCAGTTGAAAGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFCQAHL*QLKECR
Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGCCTGGCA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLNGTSA*PGCLGV
Trigger: GACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCNGTSA*PGCLGV
Trigger: GACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGCCAGAGGATACCTCTaGTGTGCCAAGAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTARGYL*CAKSMF
Trigger: GAACATGCTCTTGGCACACCAGAGGTATCCTCTGGC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGTCTTGACTCTTTGGTaGTGTCTGAGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAVLTLW*CLRISP
Trigger: AGGAGAAATCCTCAGACACCACCAAAGAGTCAAGAC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCCTGCCCAGGCTGCTTaGGAGTCTCTGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARPAQAA*ESLEQA
Trigger: AGCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSLGCS*RTRERW
Trigger: CCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTCCACTGGTCCCACTCTaGCTAAATGTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTPLVPL*LNVQLS
Trigger: AGAAAGCTGGACATTTAGTCAGAGTGGGACCAGTGG...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGTACCTCCTGCTGGTaGTACCCGGCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKASTSCW*YPAICC
Trigger: ACAGCAGATGGCCGGGTATCACCAGCAGGAGGTACT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGTACCTCCTGCTGGTaGTACCCGGCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSTSCW*YPAICC
Trigger: ACAGCAGATGGCCGGGTATCACCAGCAGGAGGTACT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAGCGGAGTTGACCTCTaGCCTCTGTGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLSGVDL*PLCTFS
Trigger: GGAAAATGTGCACAGAGGTCAGAGGTCAACTCCGCT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAGCGGAGTTGACCTCTaGCCTCTGTGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCSGVDL*PLCTFS
Trigger: GGAAAATGTGCACAGAGGTCAGAGGTCAACTCCGCT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATGGGTGAGCGGAGTTaGCCTCTGACCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFMGERS*PLTSVH
Trigger: GTGCACAGAGGTCAGAGGTCAACTCCGCTCACCCAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAAGGTGGATCTATGACTaGGAGTCCCACTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVRWIYD*ESHSGQ
Trigger: CTGACCAGAGTGGGACTCTCAGTCATAGATCCACCT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTACTGCGTCTCCATCTaGGACGCAATCTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFYCVSI*DAIFYF
Trigger: GAAGTAGAAGATTGCGTCTCAGATGGAGACGCAGTA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCTTCCTTTTCCCAGATaGAGTGGTGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCLPFPR*SGGCFS
Trigger: GGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTGTTTCACCAACATCTTaGTCTAGGCCATCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCVSPTS*SRPSAP
Trigger: TGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAAC...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGCCAGGCACATCTCTaGCAGTTGAAAGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTCQAHL*QLKECR
Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGCCTGGCA...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARCHLRM*GPSCEG
Trigger: CCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGCATTTCTGGAGTACTaGTCCGCGTCTCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARAFLEY*SASPRP
Trigger: AGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCATTTCTGGAGTACTaGTCCGCGTCTCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFAFLEY*SASPRP
Trigger: AGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTGGCTCCAGGCCTCCTaGAATTTCCTTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLWLQAS*NFLPFP
Trigger: GGGAAAAGGAAGGAAATTGCAGGAGGCCTGGAGCCA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTTCTCTATGGGAAAGTaGAGAGAAGCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLFSMGK*REARGA
Trigger: GGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTKKCIH*SPGSLL
Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCCTGTCCTGATAGGCTaGGTGGTAGTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLPVLIG*VVVHLP
Trigger: TGGAAGATGCACTACCACCCAGCCTATCAGGACAGG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCTGTCCTGATAGGCTaGGTGGTAGTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACPVLIG*VVVHLP
Trigger: TGGAAGATGCACTACCACCCAGCCTATCAGGACAGG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCCTGTCCTGATAGGCTaGGTGGTAGTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCPVLIG*VVVHLP
Trigger: TGGAAGATGCACTACCACCCAGCCTATCAGGACAGG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCACTGTCCTCAGGCTTaGCCTGTCCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAHCPQA*PVLIGW
Trigger: CCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCCACTGTCCTCAGGCTTaGCCTGTCCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCHCPQA*PVLIGW
Trigger: CCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTG...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCACGGCAGGCATTTCTaGAGTACTGCTCCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHGRHF*STAPRL
Trigger: GAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTGTGCACATTTTCCATaGCTGCCACTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLCAHFP*LPLQPA
Trigger: CGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 72 bp AGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTaGCTGAGCTCCAGATCGCAAACCTTCCCTACCCCC +
Preference number: 4 (lower is better)
Translates to: SANEMEKTLLSQ*LSSRSQTFPTP
Trigger: GGGGGTAGGGAAGGTTTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACGSLLW*FIIFSF
Trigger: GAAACTGAAGATGATGAATCACCAGAGCAGCGAGCC...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLSLGCS*RTRERW
Trigger: CCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTVSFVD*QWVLGI
Trigger: AATCCCCAACACCCACTGTCAATCCACGAAAGAAAC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCATTTTCATCCCTTCTaGTGCCAGGCACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLHFHPF*CQAHLC
Trigger: GCAGAGATGTGCCTGGCATCAGAAGGGATGAAAATG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGCTTCCCTTGCCACTTaGGGATGTGCGGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARASLAT*GCADLL
Trigger: AAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCCACTGGTCCCACTCTaGCTAAATGTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLPLVPL*LNVQLS
Trigger: AGAAAGCTGGACATTTAGTCAGAGTGGGACCAGTGG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACCACTGGTCCCACTCTaGCTAAATGTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVPLVPL*LNVQLS
Trigger: AGAAAGCTGGACATTTAGTCAGAGTGGGACCAGTGG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGGTTTTAGTCGGTTCTaGGGACACATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFGFSRF*GHISSL
Trigger: AAGACTGGAAATGTGTCCTCAGAACCGACTAAAACC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATGGGTGAGCGGAGTTaGCCTCTGACCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLMGERS*PLTSVH
Trigger: GTGCACAGAGGTCAGAGGTCAACTCCGCTCACCCAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKANFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTKDSGF*ENKLAQ
Trigger: CTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCTTCCTTTTCCCAGATaGAGTGGTGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSALPFPR*SGGCFS
Trigger: GGAGAAGCACCCACCACTTCATCTGGGAAAAGGAAG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGTCCATCAAACCCTaGATACTTCGCCAGACACAT +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAQSIKP*ILRQTH
Trigger: ATGTGTCTGGCGAAGTATTCAGGGTTTGATGGACTG...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGGCTTGGGGTCTTCCTaGGGGTGCCAGTCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDGLGSS*GCQSSQ
Trigger: TTGACTTGACTGGCACCCTCAGGAAGACCCCAAGCC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTCGCTTCACTGTACACTaGTCCACATACAGTACATGC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTRFTVH*STYSTC
Trigger: GCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCG...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGGGAGGAAGATGAACTaGGGCAAAGCCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTGRKMN*GKAFVI
Trigger: TATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGTTTCACCAACATCTTaGTCTAGGCCATCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEVSPTS*SRPSAP
Trigger: TGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAAC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGGTCTCCGGGCTCGCTaGTCTGGTGATTCATCATCT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARGLRAR*SGDSSS
Trigger: AGATGATGAATCACCAGAGCAGCGAGCCCGGAGACC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGGTCTCCGGGCTCGCTaGTCTGGTGATTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFGLRAR*SGDSSS
Trigger: AGATGATGAATCACCAGAGCAGCGAGCCCGGAGACC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCATCAGGCCTGCATGTaGCAGAGGATACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHQACM*QRIPLV
Trigger: CACCAGAGGTATCCTCTGGCACATGCAGGCCTGATG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGATGTGCGGACCTTCTTaGGAGGGGTATCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLMCGPS*EGYLQV
Trigger: AACTTGGAGATACCCCTCGCAAGAAGGTCCGCACAT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTATGTGCGGACCTTCTTaGGAGGGGTATCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLMCGPS*EGYLQV
Trigger: AACTTGGAGATACCCCTCGCAAGAAGGTCCGCACAT...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDCHLRM*GPSCEG
Trigger: CCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTGCTTGGCATCCAAAATaGTTCCCTTGCCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCAWHPK*FPCHLR
Trigger: CCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGC...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCCCACCAAAGGTTCTTaGGTTGTTGTTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCPTKGS*VVVGSG
Trigger: TCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGCAGTCTGTCTCAGTTaGTTTAGGGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLAVCLS*FRETPL
Trigger: CAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFISTGA*GISFGC
Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACTTTGCTGTATGGAATaGCATCCTCCAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWELCCME*HPPASS
Trigger: GCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTCTCTATGGGAAAGTaGAGAGAAGCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAFSMGK*REARGA
Trigger: GGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAA...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCKKCIH*SPGSLL
Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTCGTACAAGAGAGCGATaGCGTTTGCAAAATAAAAGA +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQARTRER*RLQNKR
Trigger: TCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTCGGTTATCAAGCCTaGGGTGTTCCTGACGTACAA +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACLGYQA*GVPDVQ
Trigger: TTGTACGTCAGGAACACCCCAGGCTTGATAACCGAG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACTCGGTTATCAAGCCTaGGGTGTTCCTGACGTACAA +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVLGYQA*GVPDVQ
Trigger: TTGTACGTCAGGAACACCCCAGGCTTGATAACCGAG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGAGGATACCTCTaGTGTGCCAAGAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPARGYL*CAKSMF
Trigger: GAACATGCTCTTGGCACACCAGAGGTATCCTCTGGC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTATGAACAGGCTCCATaGTGTTTCTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAYEQAP*CFCLLK
Trigger: TTTCAGAAGACAGAAACACCATGGAGCCTGTTCATA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAATGTGCACATTTTCCATaGCTGCCACTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWECAHFP*LPLQPA
Trigger: CGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACA...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGAAAGGGCGCTTCACTaGTCAGCGCAGGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLERALH*SAQEIS
Trigger: ACTTATTTCCTGCGCTGACCAGTGAAGCGCCCTTTC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCTGAGAGTCCCACTCTaGTCAGGCATACCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARLRVPL*SGIPPS
Trigger: TGAGGGAGGTATGCCTGACCAGAGTGGGACTCTCAG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFTQGGR*TAAKPL
Trigger: CAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCAACTTCCAGCTTCTGTaGTGCAGCAGGATTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSANFQLL*CSRIPG
Trigger: TCCTGGAATCCTGCTGCATCACAGAAGCTGGAAGTT...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKSLGCS*RTRERW
Trigger: CCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLVSFVD*QWVLGI
Trigger: AATCCCCAACACCCACTGTCAATCCACGAAAGAAAC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFAWQVS*RVRWEG
Trigger: GCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCTCAGGCCTCCCATTTaGGTAGGATCAGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARLRPPI*VGSAIP
Trigger: TGGAATGGCTGATCCTACTCAAATGGGAGGCCTGAG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCTCAGGCCTCCCATTTaGGTAGGATCAGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKALRPPI*VGSAIP
Trigger: TGGAATGGCTGATCCTACTCAAATGGGAGGCCTGAG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTCAGGCCTCCCATTTaGGTAGGATCAGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLRPPI*VGSAIP
Trigger: TGGAATGGCTGATCCTACTCAAATGGGAGGCCTGAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGCTTCCCTTGCCACTTaGGGATGTGCGGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLASLAT*GCADLL
Trigger: AAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGAAGAGTTGCTTGTTTaGCCATTTATCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTEELLV*PFIPTS
Trigger: GGAAGTGGGGATAAATGGTCAAACAAGCAACTCTTC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTATGGCTTCTGTAGGGTaGATGGCATCCAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLMASVG*MASKKS
Trigger: ACTCTTCTTGGATGCCATTCACCCTACAGAAGCCAT...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAAGTACCTCCTGCTGGTaGTACCCGGCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKSTSCW*YPAICC
Trigger: ACAGCAGATGGCCGGGTATCACCAGCAGGAGGTACT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCAGCGGAGTTGACCTCTaGCCTCTGTGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCSGVDL*PLCTFS
Trigger: GGAAAATGTGCACAGAGGTCAGAGGTCAACTCCGCT...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGCGGAGTTGACCTCTaGCCTCTGTGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSGVDL*PLCTFS
Trigger: GGAAAATGTGCACAGAGGTCAGAGGTCAACTCCGCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGATGGGTGAGCGGAGTTaGCCTCTGACCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEMGERS*PLTSVH
Trigger: GTGCACAGAGGTCAGAGGTCAACTCCGCTCACCCAT...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLNFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTTGCAGGTGGATCTATaGCTGAGAGTCCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKALQVDL*LRVPLW
Trigger: CCAGAGTGGGACTCTCAGTCATAGATCCACCTGCAA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTACTGCGTCTCCATCTaGGACGCAATCTTCTACTTC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCYCVSI*DAIFYF
Trigger: GAAGTAGAAGATTGCGTCTCAGATGGAGACGCAGTA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTAACATTTCCATACATTaGGCCAAAGACTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFNISIH*AKDCRV
Trigger: CACTCTGCAGTCTTTGGCTCAATGTATGGAAATGTT...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTAGAGTTTTGAGGCATTaGATTAGATCCTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQARVLRH*IRSLLL
Trigger: GAGTAACAAGGATCTAATTCAATGCCTCAAAACTCT...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGCGATTCAGTCATGCTaGAACTGTCAACAGACTTTA +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFAIQSC*NCQQTL
Trigger: TAAAGTCTGTTGACAGTTTCAGCATGACTGAATCGC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGCTTCACTGTACACTaGTCCACATACAGTACATGC +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACRFTVH*STYSTC
Trigger: GCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTTTCACCAACATCTTaGTCTAGGCCATCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVSPTS*SRPSAP
Trigger: TGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGAGAGCGATGGCGTTTaGAAAATAAAAGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAESDGV*KIKEMH
Trigger: ATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAGGATACCTCTGGTGTaGCAAGAGCATGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWERIPLV*QEHVLQ
Trigger: CTGGAGAACATGCTCTTGGCACACCAGAGGTATCCT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAAGACTGCCTCTTTTTaGAAGTCTTCTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTKTASF*KSSWVW
Trigger: CCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCATGTGCGGACCTTCTTaGGAGGGGTATCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAMCGPS*EGYLQV
Trigger: AACTTGGAGATACCCCTCGCAAGAAGGTCCGCACAT...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKCHLRM*GPSCEG
Trigger: CCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSECHLRM*GPSCEG
Trigger: CCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACCAAAATGCTTCCCTTaGCACTTGAGGATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEPKCFP*HLRMCG
Trigger: TCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTCCAAAATGCTTCCCTTaGCACTTGAGGATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPPKCFP*HLRMCG
Trigger: TCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGG...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAGGGGTCAATGGTTCTaGTTTTATACCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTRGQWF*FYTLWC
Trigger: ACACCAGAGGGTATAAAAGCAGAACCATTGACCCCT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACCCACCAAAGGTTCTTaGGTTGTTGTTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEPTKGS*VVVGSG
Trigger: TCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCATTTCTGGAGTACTaGTCCGCGTCTCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEAFLEY*SASPRP
Trigger: AGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTISTGA*GISFGC
Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGCTGTGCATAGCAATTaGAACCCGTCCAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEAVHSN*NPSSQS
Trigger: AGATTGGCTGGACGGGTTGCAATTGCTATGCACAGC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGTGCCAATCAGGCTGTaGATAGCAATTGCAACCCGT +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAVPIRL*IAIATR
Trigger: ACGGGTTGCAATTGCTATGCACAGCCTGATTGGCAC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTATCATTCCGATGCTTTaGTACCCTCTTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFIIPML*YPLYLL
Trigger: AAGCAGGTAAAGAGGGTAGCAAAGCATCGGAATGAT...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGCACATCATTCCGATaGTTTGCTACCCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPASTSFR*FATLFT
Trigger: GGTAAAGAGGGTAGCAAAGCATCGGAATGATGTGCT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGTCAGGGTTTCTCTATaGGAAAGTGGAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLVRVSL*ESGEKL
Trigger: GAGCTTCTCTCCACTTTCCCATAGAGAAACCCTGAC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPKKCIH*SPGSLL
Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEKKCIH*SPGSLL
Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACTCGGTTATCAAGCCTaGGGTGTTCCTGACGTACAA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWELGYQA*GVPDVQ
Trigger: TTGTACGTCAGGAACACCCCAGGCTTGATAACCGAG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGTCTTTGCTTTCTTaGGGCTTGGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACQSLLS*GLASLL
Trigger: CAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCAGTCTTTGCTTTCTTaGGGCTTGGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCQSLLS*GLASLL
Trigger: CAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCCAGAGGATACCTCTaGTGTGCCAAGAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFARGYL*CAKSMF
Trigger: GAACATGCTCTTGGCACACCAGAGGTATCCTCTGGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGTCTTGACTCTTTGGTaGTGTCTGAGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTVLTLW*CLRISP
Trigger: AGGAGAAATCCTCAGACACCACCAAAGAGTCAAGAC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCTGTCCTGATAGGCTaGGTGGTAGTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPVLIG*VVVHLP
Trigger: TGGAAGATGCACTACCACCCAGCCTATCAGGACAGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCACTGTCCTCAGGCTTaGCCTGTCCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLHCPQA*PVLIGW
Trigger: CCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACACGGCAGGCATTTCTaGAGTACTGCTCCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGHGRHF*STAPRL
Trigger: GAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGTGCACATTTTCCATaGCTGCCACTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFCAHFP*LPLQPA
Trigger: CGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGAAAGGGCGCTTCACTaGTCAGCGCAGGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAERALH*SAQEIS
Trigger: ACTTATTTCCTGCGCTGACCAGTGAAGCGCCCTTTC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAAAGTGCAGAATATATaGACCACGAGGCCGAGCATA +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTKVQNI*TTRPSI
Trigger: TATGCTCGGCCTCGTGGTCCATATATTCTGCACTTT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGATTTGCATTGTGGGTaGAAGAGTTTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFDLHCG*KSFEAL
Trigger: CAATGCCTCAAAACTCTTCCACCCACAATGCAAATC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTCGGCCCCAAGAAGTTaGACCTTATCAATATCCTCC +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPSAPRS*TLSISS
Trigger: GGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFGSLLW*FIIFSF
Trigger: GAAACTGAAGATGATGAATCACCAGAGCAGCGAGCC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHESLGCS*RTRERW
Trigger: CCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEVSFVD*QWVLGI
Trigger: AATCCCCAACACCCACTGTCAATCCACGAAAGAAAC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCACATCTCTGCCAGTTaGAAGAGTGCAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAHISAS*KSADFP
Trigger: TGGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTCACATCTCTGCCAGTTaGAAGAGTGCAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPHISAS*KSADFP
Trigger: TGGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTG...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCATTTTCATCCCTTCTaGTGCCAGGCACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARHFHPF*CQAHLC
Trigger: GCAGAGATGTGCCTGGCATCAGAAGGGATGAAAATG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGCTTCCCTTGCCACTTaGGGATGTGCGGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKASLAT*GCADLL
Trigger: AAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCACTGGTCCCACTCTaGCTAAATGTCCAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPLVPL*LNVQLS
Trigger: AGAAAGCTGGACATTTAGTCAGAGTGGGACCAGTGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACACAATGTTTTACAATaGAAGGGCGCTTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVHNVLQ*KGASLV
Trigger: GACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGAACTTCTGCTTCAAGTaGATCTGGGCCGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLNFCFK*IWAVWG
Trigger: GCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTT...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTTCCAGCACCGGAACTaGAGTAATATCTACAACCAT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTFQHRN*SNIYNH
Trigger: ATGGTTGTAGATATTACTTCAGTTCCGGTGCTGGAA...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCATCCCCTTTACAAATaGTGGCTCCAGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLHPLYK*WLQASC
Trigger: GCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAGGATTGGCCTTATATaGGGGCTCTGTGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLRIGLI*GLCGAV
Trigger: CACTGCTCCACAGAGCCCTCATATAAGGCCAATCCT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCACATGCATGTCTCTGTaGTTTAGGTTAGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPATCMSL*FRLELV
Trigger: CACAAGCTCTAACCTAAATCACAGAGACATGCATGT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCTCGCGGAGCCGCTCTaGCTCCGCTTCACTGTACAC +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVILAEPL*LRFTVH
Trigger: GTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGGTCTCCGGGCTCGCTaGTCTGGTGATTCATCATCT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEGLRAR*SGDSSS
Trigger: AGATGATGAATCACCAGAGCAGCGAGCCCGGAGACC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGGATACCTCTGGTGTaGCAAGAGCATGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFRIPLV*QEHVLQ
Trigger: CTGGAGAACATGCTCTTGGCACACCAGAGGTATCCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGCCAGGCACATCTCTaGCAGTTGAAAGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFCQAHL*QLKECR
Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGCCTGGCA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPASDSED*LFLQVF
Trigger: GAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGA...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGCCCCAGTCTCCTTTTaGGACGGCTTCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAAPVSF*DGFNGI
Trigger: TATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGCTTGGCATCCAAAATaGTTCCCTTGCCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARAWHPK*FPCHLR
Trigger: CCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAGGGGTCAATGGTTCTaGTTTTATACCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCRGQWF*FYTLWC
Trigger: ACACCAGAGGGTATAAAAGCAGAACCATTGACCCCT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGCATCCAAGAAGAGTTaGTTGTTTGACCATTTATCC +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFASKKS*LFDHLS
Trigger: GGATAAATGGTCAAACAAGCAACTCTTCTTGGATGC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCCACCAAAGGTTCTTaGGTTGTTGTTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPTKGS*VVVGSG
Trigger: TCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGCAGTCTGTCTCAGTTaGTTTAGGGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAAVCLS*FRETPL
Trigger: CAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCAGTCTGTCTCAGTTaGTTTAGGGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFAVCLS*FRETPL
Trigger: CAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGAATGGTACATCTGCCTaGCCAGGCTGCTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSENGTSA*PGCLGV
Trigger: GACTCCCAAGCAGCCTGGGCAGGCAGATGTACCATT...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGTGCCAATCAGGCTGTaGATAGCAATTGCAACCCGT +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCVPIRL*IAIATR
Trigger: ACGGGTTGCAATTGCTATGCACAGCCTGATTGGCAC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAGGACTGAAGGAGGGTaGTCTGGCAAAAATAGATCT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLRTEGG*SGKNRS
Trigger: AGATCTATTTTTGCCAGAGCACCCTCCTTCAGTCCT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCATCTCCAGTAAGTTaGCCTCCCACCCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSSPVS*PPTPNP
Trigger: AGGGTTGGGGGTGGGAGGGCAACTTACTGGAGATGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGCTTTGCAGGATTTCTaGTACTCTCAGTGCCTAACC +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEALQDF*YSQCLT
Trigger: GGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTCCAGGAAGGCAAATaGAAAGTACACAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCFQEGK*KVHREE
Trigger: TTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFKKCIH*SPGSLL
Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTCGTACAAGAGAGCGATaGCGTTTGCAAAATAAAAGA +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFRTRER*RLQNKR
Trigger: TCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCTCGGTTATCAAGCCTaGGGTGTTCCTGACGTACAA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKALGYQA*GVPDVQ
Trigger: TTGTACGTCAGGAACACCCCAGGCTTGATAACCGAG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTCGGTTATCAAGCCTaGGGTGTTCCTGACGTACAA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLGYQA*GVPDVQ
Trigger: TTGTACGTCAGGAACACCCCAGGCTTGATAACCGAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACCAAAGTTTCTTTCGTaGATTGACAGTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVPKFLS*IDSGCW
Trigger: CCAACACCCACTGTCAATCCACGAAAGAAACTTTGG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGCCAGAGGATACCTCTaGTGTGCCAAGAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLARGYL*CAKSMF
Trigger: GAACATGCTCTTGGCACACCAGAGGTATCCTCTGGC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGTAGAAGCATCAGAGTaGGACGTACTTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAVEASE*DVLEDI
Trigger: GATATCTTCAAGTACGTCCCACTCTGATGCTTCTAC...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGTAGAAGCATCAGAGTaGGACGTACTTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTVEASE*DVLEDI
Trigger: GATATCTTCAAGTACGTCCCACTCTGATGCTTCTAC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTGCTTTTATACCCTCTaGTGTCTCACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFCFYTL*CLTRNV
Trigger: AACATTTCTGGTGAGACACCAGAGGGTATAAAAGCA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTGTGCACATTTTCCATaGCTGCCACTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDCAHFP*LPLQPA
Trigger: CGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCLRHFF*LSIMGE
Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLRHFF*LSIMGE
Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGAAAGGGCGCTTCACTaGTCAGCGCAGGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAERALH*SAQEIS
Trigger: ACTTATTTCCTGCGCTGACCAGTGAAGCGCCCTTTC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGAAAGGGCGCTTCACTaGTCAGCGCAGGAAATAAGT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFERALH*SAQEIS
Trigger: ACTTATTTCCTGCGCTGACCAGTGAAGCGCCCTTTC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTCTGCTTGGGAGTCTCTaGAACAGGCTTTTTAATATT +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFLLGSL*NRLFNI
Trigger: AATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAG...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACTGAGAGTCCCACTCTaGTCAGGCATACCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGLRVPL*SGIPPS
Trigger: TGAGGGAGGTATGCCTGACCAGAGTGGGACTCTCAG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGCTGTGACGCAAGAGTaGGGAAATACTTTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLAVTQE*GNTLCY
Trigger: ATAGCACAAAGTATTTCCCCACTCTTGCGTCACAGC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGATCACTGCTAGCGAGTaGTCCAAAACTCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARITASE*SKTPTA
Trigger: GGCTGTTGGAGTTTTGGACCACTCGCTAGCAGTGAT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAAGGCTAAAGAAAACTaGAACAGTACTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAKAKEN*NSTASP
Trigger: TGGAGACGCAGTACTGTTCCAGTTTTCTTTAGCCTT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTCCCAGATGAAGTGGTaGGTGCTTCTCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARSQMKW*VLLLCC
Trigger: ACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTATATGAGGGCTCTGTaGAGCAGTGCAATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLYMRAL*SSAIEG
Trigger: ACCTTCAATTGCACTGCTCCACAGAGCCCTCATATA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGTCAAAACACTGCAGTaGAAAATAGTGGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAVKTLQ*KIVALK
Trigger: CTTCAGTGCCACTATTTTCCACTGCAGTGTTTTGAC...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCTCAGTAACCACCTCTaGCCCAAGTTATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCLSNHL*PKLSGN
Trigger: ATTTCCTGATAACTTGGGCCAGAGGTGGTTACTGAG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKTQGGR*TAAKPL
Trigger: CAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAQDFPL*FQWNIR
Trigger: TCTGATGTTCCACTGAAATCACAATGGAAAGTCTTG...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTCGGCCCCAAGAAGTTaGACCTTATCAATATCCTCC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSAPRS*TLSISS
Trigger: GGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVSFVD*QWVLGI
Trigger: AATCCCCAACACCCACTGTCAATCCACGAAAGAAAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGAWQVS*RVRWEG
Trigger: GCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACTCAGGCCTCCCATTTaGGTAGGATCAGCCATTCCA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGLRPPI*VGSAIP
Trigger: TGGAATGGCTGATCCTACTCAAATGGGAGGCCTGAG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAACAATGGTGACTTCTaGCGTAATTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPANNGDF*RNSGDS
Trigger: AGAATCTCCTGAATTACGTCAGAAGTCACCATTGTT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGAGTGGGACGTACTTaGAGATATCTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKARVGRT*RYLGKL
Trigger: CAGTTTGCCGAGATATCTTCAAGTACGTCCCACTCT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGAGTGGGACGTACTTaGAGATATCTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFRVGRT*RYLGKL
Trigger: CAGTTTGCCGAGATATCTTCAAGTACGTCCCACTCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAACTGCGAAGTGTTTaGAGAAATCTCTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLQLRSV*RNLCKL
Trigger: CAGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACAACTGCGAAGTGTTTaGAGAAATCTCTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVQLRSV*RNLCKL
Trigger: CAGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCCACATCTCTGCCAGTTaGAAGAGTGCAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCHISAS*KSADFP
Trigger: TGGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTG...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCATTTTCATCCCTTCTaGTGCCAGGCACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLHFHPF*CQAHLC
Trigger: GCAGAGATGTGCCTGGCATCAGAAGGGATGAAAATG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGTAACAGGACTATATTaGGGGAGGCTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTVTGLY*GRLLNF
Trigger: AAAATTCAACAGCCTCCCTCAATATAGTCCTGTTAC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGAAGAGTTGCTTGTTTaGCCATTTATCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAEELLV*PFIPTS
Trigger: GGAAGTGGGGATAAATGGTCAAACAAGCAACTCTTC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATGGCTTCTGTAGGGTaGATGGCATCCAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFMASVG*MASKKS
Trigger: ACTCTTCTTGGATGCCATTCACCCTACAGAAGCCAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGAGCGGAGTTGACCTCTaGCCTCTGTGCACATTTTCC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSESGVDL*PLCTFS
Trigger: GGAAAATGTGCACAGAGGTCAGAGGTCAACTCCGCT...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCACAATGTTTTACAATaGAAGGGCGCTTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAHNVLQ*KGASLV
Trigger: GACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAACATTTCCATACATTaGGCCAAAGACTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCNISIH*AKDCRV
Trigger: CACTCTGCAGTCTTTGGCTCAATGTATGGAAATGTT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGAGGAGGCAGTTTGTaGAGTCAAAACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLGGGSL*SQNTAV
Trigger: CACTGCAGTGTTTTGACTTCACAAACTGCCTCCTCC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCTGAGGCACTCATGTaGGGAGTCAGGGGACATGAG +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAEALM*GVRGHE
Trigger: CTCATGTCCCCTGACTCCTCACATGAGTGCCTCAGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAACTTCCAGCTTCTGTaGTGCAGCAGGATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKANFQLL*CSRILS
Trigger: TGAGAGAATCCTGCTGCATCACAGAAGCTGGAAGTT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTACAGCACATAATTCTTaGCTGCCTCACTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFTAHNS*LPHCFQ
Trigger: CTGGAAGCAGTGAGGCAGTCAAGAATTATGTGCTGT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS-3UTR GCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGGGAGGAAGATGAACTaGGGCAAAGCCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCGRKMN*GKAFVI
Trigger: TATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGGGAGGAAGATGAACTaGGGCAAAGCCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFGRKMN*GKAFVI
Trigger: TATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGTTTCACCAACATCTTaGTCTAGGCCATCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEVSPTS*SRPSAP
Trigger: TGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAAC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGGTCTCCGGGCTCGCTaGTCTGGTGATTCATCATCT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEGLRAR*SGDSSS
Trigger: AGATGATGAATCACCAGAGCAGCGAGCCCGGAGACC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACATTTCTTCAGTCTTTaGTTTCTTGGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVHFFSL*FLGAWQ
Trigger: TTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAGGATACCTCTGGTGTaGCAAGAGCATGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLRIPLV*QEHVLQ
Trigger: CTGGAGAACATGCTCTTGGCACACCAGAGGTATCCT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVSDSED*LFLQVF
Trigger: GAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGCCCCAGTCTCCTTTTaGGACGGCTTCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDAPVSF*DGFNGI
Trigger: TATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCCAAAATGCTTCCCTTaGCACTTGAGGATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDPKCFP*HLRMCG
Trigger: TCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGCAGTCTGTCTCAGTTaGTTTAGGGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLAVCLS*FRETPL
Trigger: CAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCGTGAGCATTTGTCATTaGAGTCTGTCTCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACVSICH*SLSQLL
Trigger: AAGCAACTGAGACAGACTGCAATGACAAATGCTCAC...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGTGAGCATTTGTCATTaGAGTCTGTCTCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLVSICH*SLSQLL
Trigger: AAGCAACTGAGACAGACTGCAATGACAAATGCTCAC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTATCATTCCGATGCTTTaGTACCCTCTTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCIIPML*YPLYLL
Trigger: AAGCAGGTAAAGAGGGTAGCAAAGCATCGGAATGAT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAGGACTGAAGGAGGGTaGTCTGGCAAAAATAGATCT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWERTEGG*SGKNRS
Trigger: AGATCTATTTTTGCCAGAGCACCCTCCTTCAGTCCT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGGGTGCTTCTCCTTTaGTGTATGGAATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFWVLLL*CMECHP
Trigger: AGGATGGCATTCCATACAGCAAAGGAGAAGCACCCA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTGGCTCCAGGCCTCCTaGAATTTCCTTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEWLQAS*NFLPFP
Trigger: GGGAAAAGGAAGGAAATTGCAGGAGGCCTGGAGCCA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTGTAACAACAGCATTTaGTTCTACTGCCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFCNNSI*FYCPFS
Trigger: TGAAAATGGGCAGTAGAAGCAAATGCTGTTGTTACA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCAGAAATGTTTTCAGTaGGGCAGTCTACAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAQKCFQ*GSLQSW
Trigger: CCAGCTCTGTAGACTGCCGCACTGAAAACATTTCTG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTTTCTGCTTTTCCTTTaGATCAAGAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLFLLFL*IKNSPP
Trigger: TGGTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTTCTGCTTTTCCTTTaGATCAAGAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCFLLFL*IKNSPP
Trigger: TGGTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCATCCTTATACTCCTTaGCCATGTCTGTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAHPYTP*PCLCIS
Trigger: AGAAATACACAGACATGGCCAAGGAGTATAAGGATG...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCCAAAGTTTCTTTCGTaGATTGACAGTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAPKFLS*IDSGCW
Trigger: CCAACACCCACTGTCAATCCACGAAAGAAACTTTGG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAGTCTTTGCTTTCTTaGGGCTTGGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQSLLS*GLASLL
Trigger: CAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTACCTCTCGGATTTCCTaGAACCACAAGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTTSRIS*NHKFLF
Trigger: AAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACTTGCTTTTCTCTTTTaGCTGCCCACCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWELAFLF*LPTKGS
Trigger: AGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACTGCAGTTGTTCCTTTaGTTTGTCATCCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVLQLFL*FVIQST
Trigger: GGTACTTTGGATGACAAACCAAAGGAACAACTGCAG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATGTGCACATTTTCCATaGCTGCCACTTCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGCAHFP*LPLQPA
Trigger: CGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLLRHFF*LSIMGE
Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCTGTGACGCAAGAGTaGGGAAATACTTTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPAVTQE*GNTLCY
Trigger: ATAGCACAAAGTATTTCCCCACTCTTGCGTCACAGC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTCTCCTTTGCTGTATaGAATGCCATCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFSFAV*NAILQP
Trigger: AGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCGTCAAAACACTGCAGTaGAAAATAGTGGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACVKTLQ*KIVALK
Trigger: CTTCAGTGCCACTATTTTCCACTGCAGTGTTTTGAC...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTATACATTGTTCTCTCTaGAGGAGGCAGTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCIHCSL*RRQFVK
Trigger: CTTCACAAACTGCCTCCTCCAGAGAGAACAATGTAT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHETQGGR*TAAKPL
Trigger: CAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVQDFPL*FQWNIR
Trigger: TCTGATGTTCCACTGAAATCACAATGGAAAGTCTTG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCAGCAATGGATGCCACTaGAGACACTTTCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCSNGCH*RHFRFG
Trigger: ACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCT...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGCAATGGATGCCACTaGAGACACTTTCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSNGCH*RHFRFG
Trigger: ACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTCGGCCCCAAGAAGTTaGACCTTATCAATATCCTCC +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSAPRS*TLSISS
Trigger: GGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGGSLLW*FIIFSF
Trigger: GAAACTGAAGATGATGAATCACCAGAGCAGCGAGCC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKGSLLW*FIIFSF
Trigger: GAAACTGAAGATGATGAATCACCAGAGCAGCGAGCC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLVSFVD*QWVLGI
Trigger: AATCCCCAACACCCACTGTCAATCCACGAAAGAAAC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEAWQVS*RVRWEG
Trigger: GCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAGAGTGGGACGTACTTaGAGATATCTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDRVGRT*RYLGKL
Trigger: CAGTTTGCCGAGATATCTTCAAGTACGTCCCACTCT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTCAACTGCGAAGTGTTTaGAGAAATCTCTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPQLRSV*RNLCKL
Trigger: CAGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTG...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGTAACAGGACTATATTaGGGGAGGCTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLVTGLY*GRLLNF
Trigger: AAAATTCAACAGCCTCCCTCAATATAGTCCTGTTAC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGGTTTTAGTCGGTTCTaGGGACACATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARGFSRF*GHISSL
Trigger: AAGACTGGAAATGTGTCCTCAGAACCGACTAAAACC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGGTTTTAGTCGGTTCTaGGGACACATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFGFSRF*GHISSL
Trigger: AAGACTGGAAATGTGTCCTCAGAACCGACTAAAACC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAATAAGTTCTTTTTCTaGGACTGGAAAGGACCTTTG +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTNKFFF*DWKGPL
Trigger: CAAAGGTCCTTTCCAGTCTCAGAAAAAGAACTTATT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325805.13
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGAAGAGTTGCTTGTTTaGCCATTTATCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKAREELLV*PFIPTS
Trigger: GGAAGTGGGGATAAATGGTCAAACAAGCAACTCTTC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGAAGAGTTGCTTGTTTaGCCATTTATCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFEELLV*PFIPTS
Trigger: GGAAGTGGGGATAAATGGTCAAACAAGCAACTCTTC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATGGCTTCTGTAGGGTaGATGGCATCCAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLMASVG*MASKKS
Trigger: ACTCTTCTTGGATGCCATTCACCCTACAGAAGCCAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCACAATGTTTTACAATaGAAGGGCGCTTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHNVLQ*KGASLV
Trigger: GACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDKDSGF*ENKLAQ
Trigger: CTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAGCAGTTTCAGGGCATaGGAAGCACAATTATTGAAA +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCSSFRA*EAQLLK
Trigger: TTTCAATAATTGTGCTTCTCATGCCCTGAAACTGCT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGGAGGAGGCAGTTTGTaGAGTCAAAACACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGGGGSL*SQNTAV
Trigger: CACTGCAGTGTTTTGACTTCACAAACTGCCTCCTCC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCAGTCCATCAAACCCTaGATACTTCGCCAGACACAT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDQSIKP*ILRQTH
Trigger: ATGTGTCTGGCGAAGTATTCAGGGTTTGATGGACTG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGCTGAGGCACTCATGTaGGGAGTCAGGGGACATGAG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIAEALM*GVRGHE
Trigger: CTCATGTCCCCTGACTCCTCACATGAGTGCCTCAGC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTTTCCTCTGCCAGTTaGAAGAGTGCAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFSSAS*KSADFP
Trigger: TGGAAAGTCTGCACTCTTTCAACTGGCAGAGGAAAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000416476.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGTTTCACCAACATCTTaGTCTAGGCCATCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEVSPTS*SRPSAP
Trigger: TGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAAC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGAGAGCGATGGCGTTTaGAAAATAAAAGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTESDGV*KIKEMH
Trigger: ATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACATTTCTTCAGTCTTTaGTTTCTTGGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEHFFSL*FLGAWQ
Trigger: TTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTGCCAGGCACATCTCTaGCAGTTGAAAGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSECQAHL*QLKECR
Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGCCTGGCA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAAGACTGCCTCTTTTTaGAAGTCTTCTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFKTASF*KSSWVW
Trigger: CCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCAAAATGCTTCCCTTaGCACTTGAGGATGTGCGGA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPKCFP*HLRMCG
Trigger: TCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGCTTGGCATCCAAAATaGTTCCCTTGCCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKAWHPK*FPCHLR
Trigger: CCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCTTGGCATCCAAAATaGTTCCCTTGCCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEAWHPK*FPCHLR
Trigger: CCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGAGGGGTCAATGGTTCTaGTTTTATACCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARRGQWF*FYTLWC
Trigger: ACACCAGAGGGTATAAAAGCAGAACCATTGACCCCT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAATATAAAGAGCACCTTTaGAAGACCTCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEYKEHL*KTSRIS
Trigger: GGAAATCCGAGAGGTCTTGCAAAGGTGCTCTTTATA...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCCCACCAAAGGTTCTTaGGTTGTTGTTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLPTKGS*VVVGSG
Trigger: TCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCCACCAAAGGTTCTTaGGTTGTTGTTGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPTKGS*VVVGSG
Trigger: TCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLGRLL*SCSFGL
Trigger: CAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKALGRLL*SCSFGL
Trigger: CAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGGCAGTCTGTCTCAGTTaGTTTAGGGAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLAVCLS*FRETPL
Trigger: CAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFISTGA*GISFGC
Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGCACATCATTCCGATaGTTTGCTACCCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKASTSFR*FATLFT
Trigger: GGTAAAGAGGGTAGCAAAGCATCGGAATGATGTGCT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTACCATTGTCAAGGTaGATGTTCCGCACCATACAA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVPLSR*MFRTIQ
Trigger: TTGTATGGTGCGGAACATGCACCTTGACAATGGTAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATCATCTCCAGTAAGTTaGCCTCCCACCCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKSSPVS*PPTPNP
Trigger: AGGGTTGGGGGTGGGAGGGCAACTTACTGGAGATGA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGCTTTGCAGGATTTCTaGTACTCTCAGTGCCTAACC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLALQDF*YSQCLT
Trigger: GGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACCAGACCAGTTCAGATaGTCCTTTTTGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEPDQFR*SFLFIV
Trigger: CACTATGAACAAAAAGGAGCATCTGAACTGGTCTGG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCTCCAGCCTCCAGCTaGTCGTCTTCAGAACATTTA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPPASS*SSSEHL
Trigger: TAAATGTTCTGAAGACGAGCAGCTGGAGGCTGGAGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCTTTGCTGTATGGAATaGCATCCTCCAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHELCCME*HPPASS
Trigger: GCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTGGGTGCTTCTCCTTTaGTGTATGGAATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDWVLLL*CMECHP
Trigger: AGGATGGCATTCCATACAGCAAAGGAGAAGCACCCA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGCTTCGTTTTCCTCTaGCAGTTGAAAGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSFVFL*QLKECR
Trigger: TCTGCACTCTTTCAACTGGCAGAGGAAAACGAAGCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416476.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTTCTCTATGGGAAAGTaGAGAGAAGCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEFSMGK*REARGA
Trigger: GGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTCCAGGAAGGCAAATaGAAAGTACACAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFQEGK*KVHREE
Trigger: TTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCATCCTTATACTCCTTaGCCATGTCTGTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCHPYTP*PCLCIS
Trigger: AGAAATACACAGACATGGCCAAGGAGTATAAGGATG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCAAAGTTTCTTTCGTaGATTGACAGTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPKFLS*IDSGCW
Trigger: CCAACACCCACTGTCAATCCACGAAAGAAACTTTGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGCCAGAGGATACCTCTaGTGTGCCAAGAGCATGTTC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEARGYL*CAKSMF
Trigger: GAACATGCTCTTGGCACACCAGAGGTATCCTCTGGC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGTCTTGACTCTTTGGTaGTGTCTGAGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAVLTLW*CLRISP
Trigger: AGGAGAAATCCTCAGACACCACCAAAGAGTCAAGAC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTACCTCTCGGATTTCCTaGAACCACAAGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCTSRIS*NHKFLF
Trigger: AAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATATGAACAGGCTCCATaGTGTTTCTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVYEQAP*CFCLLK
Trigger: TTTCAGAAGACAGAAACACCATGGAGCCTGTTCATA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTATGAACAGGCTCCATaGTGTTTCTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLYEQAP*CFCLLK
Trigger: TTTCAGAAGACAGAAACACCATGGAGCCTGTTCATA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTTGCTTTTCTCTTTTaGCTGCCCACCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLAFLF*LPTKGS
Trigger: AGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCACGGCAGGCATTTCTaGAGTACTGCTCCGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIHGRHF*STAPRL
Trigger: GAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGLRHFF*LSIMGE
Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKASERTN*PRMLTS
Trigger: AGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARSERTN*PRMLTS
Trigger: AGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTCTGCTTGGGAGTCTCTaGAACAGGCTTTTTAATATT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCLLGSL*NRLFNI
Trigger: AATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAG...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAAAGTGCAGAATATATaGACCACGAGGCCGAGCATA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAKVQNI*TTRPSI
Trigger: TATGCTCGGCCTCGTGGTCCATATATTCTGCACTTT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTGTAGATGGTATCTGCTaGCAGATTAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCVDGIC*QIKVHT
Trigger: AGTGTGTACTTTAATCTGCCAGCAGATACCATCTAC...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGAAGAGTTTATAATCTaGTATGTGGAGTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLEEFII*YVESQV
Trigger: CACCTGAGACTCCACATACCAGATTATAAACTCTTC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 72 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTaGCTGAGCCAGTTGCTGAGCTCCAGATCGCAAACC +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKT*LSQLLSSRSQT
Trigger: GGTTTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAWQVS*RVRWEG
Trigger: GCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTAACAATGGTGACTTCTaGCGTAATTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPNNGDF*RNSGDS
Trigger: AGAATCTCCTGAATTACGTCAGAAGTCACCATTGTT...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAACTGCGAAGTGTTTaGAGAAATCTCTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQLRSV*RNLCKL
Trigger: CAGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACACATCTCTGCCAGTTaGAAGAGTGCAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKHISAS*KSADFP
Trigger: TGGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTTCAATGGTATATATaGCGCTCTCAATGTCAGATT +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACLQWYI*RSQCQI
Trigger: AATCTGACATTGAGAGCGTCATATATACCATTGAAG...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTACTTCAATGGTATATATaGCGCTCTCAATGTCAGATT +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVLQWYI*RSQCQI
Trigger: AATCTGACATTGAGAGCGTCATATATACCATTGAAG...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAFQHPS*SEEFPF
Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARFQHPS*SEEFPF
Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFQHPS*SEEFPF
Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGGTTTTAGTCGGTTCTaGGGACACATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDGFSRF*GHISSL
Trigger: AAGACTGGAAATGTGTCCTCAGAACCGACTAAAACC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTTTTAGTCGGTTCTaGGGACACATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLGFSRF*GHISSL
Trigger: AAGACTGGAAATGTGTCCTCAGAACCGACTAAAACC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAATGGCTTCTGTAGGGTaGATGGCATCCAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKMASVG*MASKKS
Trigger: ACTCTTCTTGGATGCCATTCACCCTACAGAAGCCAT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKKDSGF*ENKLAQ
Trigger: CTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAAGGTGGATCTATGACTaGGAGTCCCACTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKRWIYD*ESHSGQ
Trigger: CTGACCAGAGTGGGACTCTCAGTCATAGATCCACCT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAAGGATTGGCCTTATATaGGGGCTCTGTGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKRIGLI*GLCGAV
Trigger: CACTGCTCCACAGAGCCCTCATATAAGGCCAATCCT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGCACATTTATATATTTaGAGGAAGGGTAGCACATAC +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLAHLYI*RKGSTY
Trigger: GTATGTGCTACCCTTCCTTCAAATATATAAATGTGC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAGAGTTTTGAGGCATTaGATTAGATCCTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: MLTSASSESGPCGATSTCRVLRH*IRSLLL
Trigger: GAGTAACAAGGATCTAATTCAATGCCTCAAAACTCT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATTTCTGACAAATTCCTaGGAGCAAGAGACTTGTTTA +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVFLTNS*EQETCL
Trigger: TAAACAAGTCTCTTGCTCTCAGGAATTTGTCAGAAA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAGCTGTGGTTAATTTATaGCATGTGAGTAAGCAATTC +
Preference number: 4 (lower is better)
Translates to: FHHLDSLASLGKDKARVVAVVNL*HVSKQF
Trigger: GAATTGCTTACTCACATGTCATAAATTAACCACAGC...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATAACATGCTGGAGATaGTACCAGGTACTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLITCWR*YQVLLE
Trigger: CTCTAGCAGTACCTGGTATCATCTCCAGCATGTTAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS-3UTR GCA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTATGTCTGTGTATTTCTaGTTTTCCTTTGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: RMLTSASSESGPCGATSTMSVYF*FSFGSR
Trigger: TCTTGATCCAAAGGAAAAGCAGAAATACACAGACAT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCATTTCTTCAGTCTTTaGTTTCTTGGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAHFFSL*FLGAWQ
Trigger: TTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCATTTCTTCAGTCTTTaGTTTCTTGGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHFFSL*FLGAWQ
Trigger: TTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAGGATACCTCTGGTGTaGCAAGAGCATGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHERIPLV*QEHVLQ
Trigger: CTGGAGAACATGCTCTTGGCACACCAGAGGTATCCT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARSDSED*LFLQVF
Trigger: GAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTATAAAGAGCACCTTTaGAAGACCTCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARYKEHL*KTSRIS
Trigger: GGAAATCCGAGAGGTCTTGCAAAGGTGCTCTTTATA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTATAAAGAGCACCTTTaGAAGACCTCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFYKEHL*KTSRIS
Trigger: GGAAATCCGAGAGGTCTTGCAAAGGTGCTCTTTATA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGCATCCAAGAAGAGTTaGTTGTTTGACCATTTATCC +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEASKKS*LFDHLS
Trigger: GGATAAATGGTCAAACAAGCAACTCTTCTTGGATGC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDLGRLL*SCSFGL
Trigger: CAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTGAGCATTTGTCATTaGAGTCTGTCTCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARVSICH*SLSQLL
Trigger: AAGCAACTGAGACAGACTGCAATGACAAATGCTCAC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTGAGCATTTGTCATTaGAGTCTGTCTCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVSICH*SLSQLL
Trigger: AAGCAACTGAGACAGACTGCAATGACAAATGCTCAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLISTGA*GISFGC
Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGATGGCTCTAAAAACCTaGAGTGCCAATCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLMALKT*SANQAV
Trigger: CACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCAT...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAATTTGGTAGTTTGTaGTGTGACGCAAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDKFGSL*CDARVG
Trigger: CCCCACTCTTGCGTCACAGCACAAACTACCAAATTT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGCAAAAGTCTGGAACTaGTCACTTGATTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLAKVWN*SLDLFL
Trigger: TAGGAATAAATCAAGTGAGCAGTTCCAGACTTTTGC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTCAGCTTCTTACAGCTaGAGCTTCAGTTACTATAAT +
Preference number: 4 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLSASYS*SFSYYN
Trigger: ATTATAGTAACTGAAGCTGCAGCTGTAAGAAGCTGA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGCAGCATGGTCCCACTaGTTCACATTAATGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCAAWSH*FTLMSN
Trigger: ATTTGACATTAATGTGAAGCAGTGGGACCATGCTGC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTCCACATACAGTACATaGAACCCGGAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSTYST*NPERLK
Trigger: TTTCAGTCTCTCCGGGTTGCATGTACTGTATGTGGA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGTCAGGGTTTCTCTATaGGAAAGTGGAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEVRVSL*ESGEKL
Trigger: GAGCTTCTCTCCACTTTCCCATAGAGAAACCCTGAC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTTCCAGGAAGGCAAATaGAAAGTACACAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLFQEGK*KVHREE
Trigger: TTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTTCTGCTTTTCCTTTaGATCAAGAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFLLFL*IKNSPP
Trigger: TGGTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGCAGTCTTTGCTTTCTTaGGGCTTGGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEQSLLS*GLASLL
Trigger: CAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTG...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCAGTCTTTGCTTTCTTaGGGCTTGGCAAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLQSLLS*GLASLL
Trigger: CAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTAGAAGCATCAGAGTaGGACGTACTTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVEASE*DVLEDI
Trigger: GATATCTTCAAGTACGTCCCACTCTGATGCTTCTAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAATGCTTTTATACCCTCTaGTGTCTCACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWECFYTL*CLTRNV
Trigger: AACATTTCTGGTGAGACACCAGAGGGTATAAAAGCA...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTTTTTCCGGAACATTaGGCTTCTCCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLFPEH*ASPFCA
Trigger: AGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000416476.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCTTGCTTTTCTCTTTTaGCTGCCCACCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDLAFLF*LPTKGS
Trigger: AGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCTGCAGTTGTTCCTTTaGTTTGTCATCCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARLQLFL*FVIQST
Trigger: GGTACTTTGGATGACAAACCAAAGGAACAACTGCAG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTGCAGTTGTTCCTTTaGTTTGTCATCCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLQLFL*FVIQST
Trigger: GGTACTTTGGATGACAAACCAAAGGAACAACTGCAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAAGTGCAGAATATATaGACCACGAGGCCGAGCATA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDKVQNI*TTRPSI
Trigger: TATGCTCGGCCTCGTGGTCCATATATTCTGCACTTT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGTAGATGGTATCTGCTaGCAGATTAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEVDGIC*QIKVHT
Trigger: AGTGTGTACTTTAATCTGCCAGCAGATACCATCTAC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGGAATTATTTTAACATaGCTTTGGGACATGGCATCG +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPGIILT*LWDMAS
Trigger: CGATGCCATGTCCCAAAGCCATGTTAAAATAATTCC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGACCATAGATCAAATTTaGCCAGAAGAGGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLTIDQI*PEEEPF
Trigger: AAAAGGTTCCTCTTCTGGCCAAATTTGATCTATGGT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 72 bp AGAATCGACAAGGTGAGTCTAAGGAACTATAAAGCTTaGCAGGATTTCTGCTACTCTCAGTGCCTAACCGCT +
Preference number: 4 (lower is better)
Translates to: RIDKVSLRNYKA*QDFCYSQCLTA
Trigger: AGCGGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGCTTTATAGTTCCTTAGACTCACCTTGTCGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVITQGGR*TAAKPL
Trigger: CAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAQDFPL*FQWNIR
Trigger: TCTGATGTTCCACTGAAATCACAATGGAAAGTCTTG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQDFPL*FQWNIR
Trigger: TCTGATGTTCCACTGAAATCACAATGGAAAGTCTTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCCTTCTCCTTCTGCTaGATGATCCTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPFSFC*MILISI
Trigger: AATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAAGCAATGGATGCCACTaGAGACACTTTCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKSNGCH*RHFRFG
Trigger: ACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAGCAATGGATGCCACTaGAGACACTTTCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSNGCH*RHFRFG
Trigger: ACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTCGGCCCCAAGAAGTTaGACCTTATCAATATCCTCC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHESAPRS*TLSISS
Trigger: GGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGAACAATGGTGACTTCTaGCGTAATTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARNNGDF*RNSGDS
Trigger: AGAATCTCCTGAATTACGTCAGAAGTCACCATTGTT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAACAATGGTGACTTCTaGCGTAATTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFNNGDF*RNSGDS
Trigger: AGAATCTCCTGAATTACGTCAGAAGTCACCATTGTT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGTAACAGGACTATATTaGGGGAGGCTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCVTGLY*GRLLNF
Trigger: AAAATTCAACAGCCTCCCTCAATATAGTCCTGTTAC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTAACAGGACTATATTaGGGGAGGCTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVTGLY*GRLLNF
Trigger: AAAATTCAACAGCCTCCCTCAATATAGTCCTGTTAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACACAATGTTTTACAATaGAAGGGCGCTTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGHNVLQ*KGASLV
Trigger: GACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACACAATGTTTTACAATaGAAGGGCGCTTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKHNVLQ*KGASLV
Trigger: GACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGAACAACTTTTTCTCTTaGGGATGCTGTGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARNNFFS*GCCGTN
Trigger: ATTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTACACATCTGGTAAGATaGACTGAACAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKATHLVR*TEQQLL
Trigger: AAGAAGCTGTTGTTCAGTTCATCTTACCAGATGTGT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTATCGATTTAAGCACATaGTCAGTTTTGACCACTGAC +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAIDLST*SVLTTD
Trigger: GTCAGTGGTCAAAACTGATCATGTGCTTAAATCGAT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGATCGATTTAAGCACATaGTCAGTTTTGACCACTGAC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARIDLST*SVLTTD
Trigger: GTCAGTGGTCAAAACTGATCATGTGCTTAAATCGAT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGGGAGGAAGATGAACTaGGGCAAAGCCTTTGTCATA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEGRKMN*GKAFVI
Trigger: TATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGAGAGCGATGGCGTTTaGAAAATAAAAGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPESDGV*KIKEMH
Trigger: ATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCATGTCTGTGTATTTCTaGTTTTCCTTTGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACMSVYF*FSFGSR
Trigger: TCTTGATCCAAAGGAAAAGCAGAAATACACAGACAT...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGATTTGCTTTCATAAATaGATCCTTATACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTSASSESGPCGATSTCLICFHK*ILILLG
Trigger: GCCAAGGAGTATAAGGATGCATTTATGAAAGCAAAT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCCCCAGTCTCCTTTTaGGACGGCTTCAATGGTATA +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAPVSF*DGFNGI
Trigger: TATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCATCCAAGAAGAGTTaGTTGTTTGACCATTTATCC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFASKKS*LFDHLS
Trigger: GGATAAATGGTCAAACAAGCAACTCTTCTTGGATGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGISTGA*GISFGC
Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCTGTGCATAGCAATTaGAACCCGTCCAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAVHSN*NPSSQS
Trigger: AGATTGGCTGGACGGGTTGCAATTGCTATGCACAGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTCCCCACCAGGAATATaGATTTTTGAGCACATCATT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSPPGI*IFEHII
Trigger: AATGATGTGCTCAAAAATGCATATTCCTGGTGGGGA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGTGTAGATGGTATCTaGTGGCAGATTAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSVDGI*WQIKVH
Trigger: GTGTACTTTAATCTGCCAGCAGATACCATCTACACT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTCAGCTTCTTACAGCTaGAGCTTCAGTTACTATAAT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPSASYS*SFSYYN
Trigger: ATTATAGTAACTGAAGCTGCAGCTGTAAGAAGCTGA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAACCTCCAGCCTCCAGCTaGTCGTCTTCAGAACATTTA +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKPPASS*SSSEHL
Trigger: TAAATGTTCTGAAGACGAGCAGCTGGAGGCTGGAGG...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCGTACAAGAGAGCGATaGCGTTTGCAAAATAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFRTRER*RLQNKR
Trigger: TCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCATCCTTATACTCCTTaGCCATGTCTGTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHPYTP*PCLCIS
Trigger: AGAAATACACAGACATGGCCAAGGAGTATAAGGATG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGTAGAAGCATCAGAGTaGGACGTACTTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLVEASE*DVLEDI
Trigger: GATATCTTCAAGTACGTCCCACTCTGATGCTTCTAC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGTAGAAGCATCAGAGTaGGACGTACTTGAAGATATC +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDVEASE*DVLEDI
Trigger: GATATCTTCAAGTACGTCCCACTCTGATGCTTCTAC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCACCTCTCGGATTTCCTaGAACCACAAGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: LKMALKTCSANQAVHSNCTSRIS*NHKFLF
Trigger: AAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGT...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTATGAACAGGCTCCATaGTGTTTCTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFYEQAP*CFCLLK
Trigger: TTTCAGAAGACAGAAACACCATGGAGCCTGTTCATA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTCTTGCGTTGTTGTTaGCTCTGGAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFLRCC*LWSVEN
Trigger: ATTTTCAACACTCCAGAGCCAACAACAACGCAAGAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACTTGCTTTTCTCTTTTaGCTGCCCACCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKLAFLF*LPTKGS
Trigger: AGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATCTGAGAGAACAAACTaGCCCAGGATGCTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKSERTN*PRMLTS
Trigger: AGAAGTTAGCATCCTGGGCCAGTTTGTTCTCTCAGA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTGCTTGGGAGTCTCTaGAACAGGCTTTTTAATATT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLLGSL*NRLFNI
Trigger: AATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGGAACTAACCTAATTTaGGGACAAGAACCTGTATTT +
Preference number: 4 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPGTNLI*GQEPVF
Trigger: AAATACAGGTTCTTGTCCCCAAATTAGGTTAGTTCC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATCCCAGATGAAGTGGTaGGTGCTTCTCCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKSQMKW*VLLLCC
Trigger: ACAGCAAAGGAGAAGCACCCACCACTTCATCTGGGA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGAAGAGTTTATAATCTaGTATGTGGAGTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAEEFII*YVESQV
Trigger: CACCTGAGACTCCACATACCAGATTATAAACTCTTC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCCCTTCTCCTTCTGCTaGATGATCCTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLPFSFC*MILISI
Trigger: AATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAGCAATGGATGCCACTaGAGACACTTTCGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHESNGCH*RHFRFG
Trigger: ACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGFQHPS*SEEFPF
Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAATAAGTTCTTTTTCTaGGACTGGAAAGGACCTTTG +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFNKFFF*DWKGPL
Trigger: CAAAGGTCCTTTCCAGTCTCAGAAAAAGAACTTATT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000416476.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAAAAGATTCTGGGTTCTaGGAGAACAAACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKKDSGF*ENKLAQ
Trigger: CTGGGCCAGTTTGTTCTCTCAGAACCCAGAATCTTT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATTCCAGCACCGGAACTaGAGTAATATCTACAACCAT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGFQHRN*SNIYNH
Trigger: ATGGTTGTAGATATTACTTCAGTTCCGGTGCTGGAA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAACAACTTTTTCTCTTaGGGATGCTGTGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLNNFFS*GCCGTN
Trigger: ATTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCACACATCTGGTAAGATaGACTGAACAACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLTHLVR*TEQQLL
Trigger: AAGAAGCTGTTGTTCAGTTCATCTTACCAGATGTGT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTACAGATGGGGATTATaGGGGAGTCAAATACATTTG +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLYRWGL*GSQIHL
Trigger: CAAATGTATTTGACTCCCTCATAATCCCCATCTGTA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCACATGATCAGTTTTaGCCACTGACTGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEAHDQF*PLTAKR
Trigger: TCTTTTTGCAGTCAGTGGTCAAAACTGATCATGTGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTTCTCAATATCCCAGTaGATCCTCCACATCTATAAC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLFSISQ*ILHIYN
Trigger: GTTATAGATGTGGAGGATTCACTGGGATATTGAGAA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS-3UTR TCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCAACAAAATTCAAGATaGTTTTGCTCTTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAQQNSR*FCSFSL
Trigger: CAGGCTGAAAGAGCAAAATCATCTTGAATTTTGTTG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGAGAGCGATGGCGTTTaGAAAATAAAAGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAESDGV*KIKEMH
Trigger: ATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGAGAGCGATGGCGTTTaGAAAATAAAAGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFESDGV*KIKEMH
Trigger: ATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAATGTCTGTGTATTTCTaGTTTTCCTTTGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEMSVYF*FSFGSR
Trigger: TCTTGATCCAAAGGAAAAGCAGAAATACACAGACAT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAATTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEFVARI*FHKCIL
Trigger: AAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACATTTCTTCAGTCTTTaGTTTCTTGGGGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKHFFSL*FLGAWQ
Trigger: TTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAAGACTGCCTCTTTTTaGAAGTCTTCTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEKTASF*KSSWVW
Trigger: CCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSDSED*LFLQVF
Trigger: GAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAGGGGTCAATGGTTCTaGTTTTATACCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHERGQWF*FYTLWC
Trigger: ACACCAGAGGGTATAAAAGCAGAACCATTGACCCCT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGTCTGGGAAAATATTTaGCACAATTTGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLVWENI*HNLPQA
Trigger: TGCTTGAGGCAAATTGTGGCAAATATTTTCCCAGAC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGTCTGGGAAAATATTTaGCACAATTTGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDVWENI*HNLPQA
Trigger: TGCTTGAGGCAAATTGTGGCAAATATTTTCCCAGAC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAAATTTGGTAGTTTGTaGTGTGACGCAAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEKFGSL*CDARVG
Trigger: CCCCACTCTTGCGTCACAGCACAAACTACCAAATTT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAGTGTAGATGGTATCTaGTGGCAGATTAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSVDGI*WQIKVH
Trigger: GTGTACTTTAATCTGCCAGCAGATACCATCTACACT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGCAGCATGGTCCCACTaGTTCACATTAATGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKAAWSH*FTLMSN
Trigger: ATTTGACATTAATGTGAAGCAGTGGGACCATGCTGC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATTTCTGCTTTTCCTTTaGATCAAGAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKFLLFL*IKNSPP
Trigger: TGGTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTGCTTTTATACCCTCTaGTGTCTCACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLCFYTL*CLTRNV
Trigger: AACATTTCTGGTGAGACACCAGAGGGTATAAAAGCA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGCTGCAGTTGTTCCTTTaGTTTGTCATCCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSELQLFL*FVIQST
Trigger: GGTACTTTGGATGACAAACCAAAGGAACAACTGCAG...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACTGCAGTTGTTCCTTTaGTTTGTCATCCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGLQLFL*FVIQST
Trigger: GGTACTTTGGATGACAAACCAAAGGAACAACTGCAG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVILRHFF*LSIMGE
Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGGAACTAACCTAATTTaGGGACAAGAACCTGTATTT +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARGTNLI*GQEPVF
Trigger: AAATACAGGTTCTTGTCCCCAAATTAGGTTAGTTCC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACATTTTAACATGGCTTTaGGACATGGCATCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDILTWL*DMASVE
Trigger: TTCTACCGATGCCATGTCCCAAAGCCATGTTAAAAT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGGAATTATTTTAACATaGCTTTGGGACATGGCATCG +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDGIILT*LWDMAS
Trigger: CGATGCCATGTCCCAAAGCCATGTTAAAATAATTCC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGATACATTGTTCTCTCTaGAGGAGGCAGTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLIHCSL*RRQFVK
Trigger: CTTCACAAACTGCCTCCTCCAGAGAGAACAATGTAT...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCTCAGTAACCACCTCTaGCCCAAGTTATCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHELSNHL*PKLSGN
Trigger: ATTTCCTGATAACTTGGGCCAGAGGTGGTTACTGAG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCCTTCTCCTTCTGCTaGATGATCCTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPFSFC*MILISI
Trigger: AATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGCCCTTCTCCTTCTGCTaGATGATCCTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEPFSFC*MILISI
Trigger: AATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGG...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACCCTTCTCCTTCTGCTaGATGATCCTTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKPFSFC*MILISI
Trigger: AATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAACAATGGTGACTTCTaGCGTAATTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGNNGDF*RNSGDS
Trigger: AGAATCTCCTGAATTACGTCAGAAGTCACCATTGTT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTAGAGTGGGACGTACTTaGAGATATCTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIRVGRT*RYLGKL
Trigger: CAGTTTGCCGAGATATCTTCAAGTACGTCCCACTCT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCTTCAATGGTATATATaGCGCTCTCAATGTCAGATT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDLQWYI*RSQCQI
Trigger: AATCTGACATTGAGAGCGTCATATATACCATTGAAG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACAAGTCCACATGAAGTaGGTGTCTTCAATGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGQVHMK*VSSMCL
Trigger: TAAACACATTGAAGACACTCACTTCATGTGGACTTG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAGCAGTTTCAGGGCATaGGAAGCACAATTATTGAAA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSSFRA*EAQLLK
Trigger: TTTCAATAATTGTGCTTCTCATGCCCTGAAACTGCT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCGCTTCACTGTACACTaGTCCACATACAGTACATGC +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIRFTVH*STYSTC
Trigger: GCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGATGTCTGTGTATTTCTaGTTTTCCTTTGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARMSVYF*FSFGSR
Trigger: TCTTGATCCAAAGGAAAAGCAGAAATACACAGACAT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATGTCTGTGTATTTCTaGTTTTCCTTTGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFMSVYF*FSFGSR
Trigger: TCTTGATCCAAAGGAAAAGCAGAAATACACAGACAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGATTTGCTTTCATAAATaGATCCTTATACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YIFHHLDSLASLGKDKARICFHK*ILILLG
Trigger: GCCAAGGAGTATAAGGATGCATTTATGAAAGCAAAT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATTTGCTTTCATAAATaGATCCTTATACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFICFHK*ILILLG
Trigger: GCCAAGGAGTATAAGGATGCATTTATGAAAGCAAAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFVARI*FHKCIL
Trigger: AAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTATAAAGAGCACCTTTaGAAGACCTCTCGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEYKEHL*KTSRIS
Trigger: GGAAATCCGAGAGGTCTTGCAAAGGTGCTCTTTATA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGCATCCAAGAAGAGTTaGTTGTTTGACCATTTATCC +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGASKKS*LFDHLS
Trigger: GGATAAATGGTCAAACAAGCAACTCTTCTTGGATGC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTCCCCACCAGGAATATaGATTTTTGAGCACATCATT +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLSPPGI*IFEHII
Trigger: AATGATGTGCTCAAAAATGCATATTCCTGGTGGGGA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCCAGACCAGTTCAGATaGTCCTTTTTGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEPDQFR*SFLFIV
Trigger: CACTATGAACAAAAAGGAGCATCTGAACTGGTCTGG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCACATTAATGTCAAATaGCAAACTTGGAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSESGPCGATSTCLQSIFHINVK*QTWNRV
Trigger: AACTCTGTTCCAAGTTTGGCATTTGACATTAATGTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAACGTACAAGAGAGCGATaGCGTTTGCAAAATAAAAGA +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKRTRER*RLQNKR
Trigger: TCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTTTCTGCTTTTCCTTTaGATCAAGAACAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEFLLFL*IKNSPP
Trigger: TGGTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGCATCCTTATACTCCTTaGCCATGTCTGTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEHPYTP*PCLCIS
Trigger: AGAAATACACAGACATGGCCAAGGAGTATAAGGATG...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAACCAAAGTTTCTTTCGTaGATTGACAGTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKPKFLS*IDSGCW
Trigger: CCAACACCCACTGTCAATCCACGAAAGAAACTTTGG...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATGCTTTTATACCCTCTaGTGTCTCACCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKCFYTL*CLTRNV
Trigger: AACATTTCTGGTGAGACACCAGAGGGTATAAAAGCA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCTTTTTCCGGAACATTaGGCTTCTCCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHELFPEH*ASPFCA
Trigger: AGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000325805.13
CDS-3UTR CCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATTCTTGCGTTGTTGTTaGCTCTGGAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGFLRCC*LWSVEN
Trigger: ATTTTCAACACTCCAGAGCCAACAACAACGCAAGAA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTTCTTGCGTTGTTGTTaGCTCTGGAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEFLRCC*LWSVEN
Trigger: ATTTTCAACACTCCAGAGCCAACAACAACGCAAGAA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTTCTTGCGTTGTTGTTaGCTCTGGAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLFLRCC*LWSVEN
Trigger: ATTTTCAACACTCCAGAGCCAACAACAACGCAAGAA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAACTTGCTTTTCTCTTTTaGCTGCCCACCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKLAFLF*LPTKGS
Trigger: AGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAG...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCAAGCAAATTCTTCTTaGTCACTCAAGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDQANSS*SLKAKK
Trigger: TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCAAGCAAATTCTTCTTaGTCACTCAAGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLQANSS*SLKAKK
Trigger: TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAAGGCTAAAGAAAACTaGAACAGTACTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEKAKEN*NSTASP
Trigger: TGGAGACGCAGTACTGTTCCAGTTTTCTTTAGCCTT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGCCTGTATTTCCAATGTaGCTGTGGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEPVFPM*LWDIFL
Trigger: AAGAAAAATGTCCCACAGCCACATTGGAAATACAGG...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATATATGAGGGCTCTGTaGAGCAGTGCAATTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKYMRAL*SSAIEG
Trigger: ACCTTCAATTGCACTGCTCCACAGAGCCCTCATATA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEQDFPL*FQWNIR
Trigger: TCTGATGTTCCACTGAAATCACAATGGAAAGTCTTG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTACAGATGGGGATTATaGGGGAGTCAAATACATTTG +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEYRWGL*GSQIHL
Trigger: CAAATGTATTTGACTCCCTCATAATCCCCATCTGTA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTTTCTGACAAATTCCTaGGAGCAAGAGACTTGTTTA +
Preference number: 4 (lower is better)
Translates to: FLLSIRQITLPSKILGSEFLTNS*EQETCL
Trigger: TAAACAAGTCTCTTGCTCTCAGGAATTTGTCAGAAA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGGCTGTGGTTAATTTATaGCATGTGAGTAAGCAATTC +
Preference number: 4 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLAVVNL*HVSKQF
Trigger: GAATTGCTTACTCACATGTCATAAATTAACCACAGC...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGCGATTCAGTCATGCTaGAACTGTCAACAGACTTTA +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKAIQSC*NCQQTL
Trigger: TAAAGTCTGTTGACAGTTTCAGCATGACTGAATCGC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACATTTGCTTTCATAAATaGATCCTTATACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDICFHK*ILILLG
Trigger: GCCAAGGAGTATAAGGATGCATTTATGAAAGCAAAT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATTTGCTTTCATAAATaGATCCTTATACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLICFHK*ILILLG
Trigger: GCCAAGGAGTATAAGGATGCATTTATGAAAGCAAAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLFVARI*FHKCIL
Trigger: AAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDFVARI*FHKCIL
Trigger: AAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVILGRLL*SCSFGL
Trigger: CAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGTCTGGGAAAATATTTaGCACAATTTGCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEVWENI*HNLPQA
Trigger: TGCTTGAGGCAAATTGTGGCAAATATTTTCCCAGAC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR GCA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGCAAAAGTCTGGAACTaGTCACTTGATTTATTCCTA +
Preference number: 4 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGAKVWN*SLDLFL
Trigger: TAGGAATAAATCAAGTGAGCAGTTCCAGACTTTTGC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGTACCATTGTCAAGGTaGATGTTCCGCACCATACAA +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIVPLSR*MFRTIQ
Trigger: TTGTATGGTGCGGAACATGCACCTTGACAATGGTAC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTTCCAGGAAGGCAAATaGAAAGTACACAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIFQEGK*KVHREE
Trigger: TTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGACCTCTCGGATTTCCTaGAACCACAAGTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHETSRIS*NHKFLF
Trigger: AAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCCTGTATTTCCAATGTaGCTGTGGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEPVFPM*LWDIFL
Trigger: AAGAAAAATGTCCCACAGCCACATTGGAAATACAGG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGATTTTAACATGGCTTTaGGACATGGCATCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEILTWL*DMASVE
Trigger: TTCTACCGATGCCATGTCCCAAAGCCATGTTAAAAT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCAACTGCGAAGTGTTTaGAGAAATCTCTGCAAACTG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIQLRSV*RNLCKL
Trigger: CAGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCTTCAATGGTATATATaGCGCTCTCAATGTCAGATT +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHELQWYI*RSQCQI
Trigger: AATCTGACATTGAGAGCGTCATATATACCATTGAAG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR TCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAACAAGTCCACATGAAGTaGGTGTCTTCAATGTGTTTA +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKQVHMK*VSSMCL
Trigger: TAAACACATTGAAGACACTCACTTCATGTGGACTTG...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGCACATTTATATATTTaGAGGAAGGGTAGCACATAC +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEAHLYI*RKGSTY
Trigger: GTATGTGCTACCCTTCCTTCAAATATATAAATGTGC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGCACATGATCAGTTTTaGCCACTGACTGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIAHDQF*PLTAKR
Trigger: TCTTTTTGCAGTCAGTGGTCAAAACTGATCATGTGC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR TCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTACATGCATGTCTCTGTaGTTTAGGTTAGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVITCMSL*FRLELV
Trigger: CACAAGCTCTAACCTAAATCACAGAGACATGCATGT...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTT +
Preference number: 4 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKFVARI*FHKCIL
Trigger: AAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGTGAGCATTTGTCATTaGAGTCTGTCTCAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIVSICH*SLSQLL
Trigger: AAGCAACTGAGACAGACTGCAATGACAAATGCTCAC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCAACAAGCACTTGTTTaGAGTCTATATTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEQQALV*SLYFPP
Trigger: TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCAAGCAAATTCTTCTTaGTCACTCAAGGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEQANSS*SLKAKK
Trigger: TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTATGAACAGGCTCCATaGTGTTTCTGTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIYEQAP*CFCLLK
Trigger: TTTCAGAAGACAGAAACACCATGGAGCCTGTTCATA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTTCTTGCGTTGTTGTTaGCTCTGGAGTGTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIFLRCC*LWSVEN
Trigger: ATTTTCAACACTCCAGAGCCAACAACAACGCAAGAA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CCA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAACCATAGATCAAATTTaGCCAGAAGAGGAACCTTTT +
Preference number: 4 (lower is better)
Translates to: HGMFTPTLKRTKPISESKTIDQI*PEEEPF
Trigger: AAAAGGTTCCTCTTCTGGCCAAATTTGATCTATGGT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
3UTR CAA 72 bp GTCAATATGTTGAATGTTCTAAGCCAGTTAATCCACTaGGCGCTGCTTATGTATGGTTGGTTTTATGTTCAA +
Preference number: 4 (lower is better)
Translates to: VNMLNVLSQLIH*ALLMYGWFYVQ
Trigger: TTGAACATAAAACCAACCATACATAAGCAGCGCCAAGTGGATTAACTGGCTTAGAACATTCAACATATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTGTAACAACAGCATTTaGTTCTACTGCCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVICNNSI*FYCPFS
Trigger: TGAAAATGGGCAGTAGAAGCAAATGCTGTTGTTACA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR GCA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCACATTAATGTCAAATaGCAAACTTGGAACAGAGTT +
Preference number: 4 (lower is better)
Translates to: NSNLREEFIIWYVESQVIHINVK*QTWNRV
Trigger: AACTCTGTTCCAAGTTTGGCATTTGACATTAATGTG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS GCA 90 bp GGCGCCCGTGCCCCTCTCAGGCGGCGCTGCCTGTGTGCCGAGAGGTaGTGGTTGCAAACGCAGCCTGGCACCGGCTGGCCTACTACTCCC +
Preference number: 5 (lower is better)
Translates to: GARAPLRRRCLCAER*WLQTQPGTGWPTTP
Trigger: GGGAGTAGTAGGCCAGCCGGTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGAGAGGGGCACGGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CCA 90 bp GCCCGTGCCCCTCTCAGGCGGCGCTGCCTGTGTGCCGAGAGGTGCTaGTTGCAAACGCAGCCTGGCACCGGCTGGCCTACTACTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ARAPLRRRCLCAERC*LQTQPGTGWPTTPQ
Trigger: CTGGGGAGTAGTAGGCCAGCCGGTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGAGAGGGGCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CCA 90 bp GGCGTGTGTGTAGCTAGCCCTCAGCGGCCAGTCAGGGTTTCTCTATaGGAAAGTGGAGAGAAGCTCGCGGAGCCGCTCTGCCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GVCVASPQRPVRVSL*ESGEKLAEPLCLRF
Trigger: GAAGCGGAGGCAGAGCGGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAAACCCTGACTGGCCGCTGAGGGCTAGCTACACACACGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000474137.1
ENST00000485939.5
CDS GCA 90 bp GGAGAGAAGCTCGCGGAGCCGCTCTGCCTCCGCTTCACTGTACACTaGTCCACATACAGTACATGCAACCCGGAGAGACTGAAAACACTC +
Preference number: 5 (lower is better)
Translates to: GEKLAEPLCLRFTVH*STYSTCNPERLKTL
Trigger: GAGTGTTTTCAGTCTCTCCGGGTTGCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAGCTTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGCCTGCCCAGGCTGCTaGGGAGTCTCTGGAACAGGC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLACPGC*GVSGTG
Trigger: GCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTGCCCAGGCTGCTaGGGAGTCTCTGGAACAGGC +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPACPGC*GVSGTG
Trigger: GCCTGTTCCAGAGACTCCCAAGCAGCCTGGGCAGGC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS GCA 90 bp AGGGTTTCTCTATGGGAAAGTGGAGAGAAGCTCGCGGAGCCGCTCTaGCTCCGCTTCACTGTACACTGCTCCACATACAGTACATGCAAC +
Preference number: 5 (lower is better)
Translates to: RVSLWESGEKLAEPL*LRFTVHCSTYSTCN
Trigger: GTTGCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTGATGTGCGGACCTTCTaGCGAGGGGTATCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFDVRTF*RGVSPS
Trigger: ACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATC...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGGAGGTCTTGACTCTTaGGTGGTGTCTGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAGGLDS*VVSEDF
Trigger: GAAATCCTCAGACACCACCAAAGAGTCAAGACCTCC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTATTCTTCATCCAGCTTaGCGGAGCCAAGGAGACAGT +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAILHPA*RSQGDS
Trigger: ACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAAT...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS GCA 90 bp TTGGTGGCTTGGCATCCAAAATGCTTCCCTTGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGGTATCTCCAAGTTTCTCTATGCCCC +
Preference number: 5 (lower is better)
Translates to: LVAWHPKCFPCHLRM*GPSCEGYLQVSLCP
Trigger: GGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAEDCLF*QVFLGV
Trigger: CACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTC...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATCACTGTCCTCAGGCTaGGCCTGTCCTGATAGGCTG +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVSLSSG*ACPDRL
Trigger: CAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTCACTGTCCTCAGGCTaGGCCTGTCCTGATAGGCTG +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCSLSSG*ACPDRL
Trigger: CAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGCCCACCAAAGGTTCTaGCGTTGTTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTAHQRF*RCCWLW
Trigger: CCAGAGCCAACAACAACGCAAGAACCTTTGGTGGGC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTACGTTGCTGAGCCAGTaGCTGAGCTCCAGATCGCAA +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTTLLSQ*LSSRSQ
Trigger: TTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp CATTTCTGGAGTACTGCTCCGCGTCTCCCCGACCTCGGTGTTGTGTaGGCATTTGTCATTGCAGTCTGTCTCAGTTGCTTTAGGGAGACT +
Preference number: 5 (lower is better)
Translates to: HFWSTAPRLPDLGVV*AFVIAVCLSCFRET
Trigger: AGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAQSASI*VAPRLS
Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTTTAGCTTTTCTGGCTaGTTTAATGCTGCGGGATCC +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAFSFSG*FNAAGS
Trigger: GGATCCCGCAGCATTAAACAAGCCAGAAAAGCTAAA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGCCCCAGTCTCCTTTaGCGACGGCTTCAATGGTAT +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTCPSLL*RRLQWY
Trigger: ATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGCA...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTGATGTGCGGACCTTCTaGCGAGGGGTATCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCDVRTF*RGVSPS
Trigger: ACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATC...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTTTTTCTTTGGTGGCTaGGCATCCAAAATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQAFFFGG*ASKMLP
Trigger: GGGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTCACTGTCCTCAGGCTaGGCCTGTCCTGATAGGCTG +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPSLSSG*ACPDRL
Trigger: CAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTCCAAAGGTTCTTGCGTaGTTGTTGGCTCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFPKVLA*LLALEC
Trigger: ACACTCCAGAGCCAACAACAACGCAAGAACCTTTGG...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAACGTTGCTGAGCCAGTaGCTGAGCTCCAGATCGCAA +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVTLLSQ*LSSRSQ
Trigger: TTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDLAG
Trigger: GCCCGCGAGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
ENST00000485939.5
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGGGGATTTCACAGGCTaGTTTGTGGTAGGACACCAT +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTGDFTG*FVVGHH
Trigger: ATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGACTCAGGCCTCCCATTaGAGTAGGATCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLTQASH*SRISHS
Trigger: GGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAACTCAGGCCTCCCATTaGAGTAGGATCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVTQASH*SRISHS
Trigger: GGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTCAGAGTGGGACGTACTaGAAGATATCTCGGCAAACT +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFQSGTY*KISRQT
Trigger: AGTTTGCCGAGATATCTTCAAGTACGTCCCACTCTG...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTGCCCCAGTCTCCTTTaGCGACGGCTTCAATGGTAT +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLCPSLL*RRLQWY
Trigger: ATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGCA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTGCTTCCCTTGCCACTaGAGGATGTGCGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPCFPCH*RMCGPS
Trigger: AGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCTCCAAAATGCTTCCCTaGCCACTTGAGGATGTGCGG +
Preference number: 5 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACSKMLP*PLEDVR
Trigger: CCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGA...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTCCAAAATGCTTCCCTaGCCACTTGAGGATGTGCGG +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLSKMLP*PLEDVR
Trigger: CCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTCACTGTCCTCAGGCTaGGCCTGTCCTGATAGGCTG +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARSLSSG*ACPDRL
Trigger: CAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTATTCTTCATCCAGCTTaGCGGAGCCAAGGAGACAGT +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTILHPA*RSQGDS
Trigger: ACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAAT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLSPTSV*CEHLSL
Trigger: CAATGACAAATGCTCACACAACACCGAGGTCGGGGA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGAAATGGAGAAAACGTaGCTGAGCCAGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAEMEKT*LSQLLS
Trigger: GCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTC...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACACTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDTPG
Trigger: GCCCGGAGTGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402163.6
CDS TCA 90 bp TCTCAATATCCCAGTGAATCCTCCACATCTATAACATGCTGGAGATaGTACCAGGTACTGCTAGAGGCTTGGGGTCTTCCTGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: SQYPSESSTSITCWR*YQVLLEAWGLPEGA
Trigger: GGCACCCTCAGGAAGACCCCAAGCCTCTAGCAGTACCTGGTATCATCTCCAGCATGTTATAGATGTGGAGGATTCACTGGGATATTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS TCA 90 bp AGGATATTCCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: RIFPGRQMESTQGGR*TAAKPLSYDSDLAG
Trigger: GCCCGCGAGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGGAATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427402.5
CDS TCA 90 bp CATACTTACCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: HTYPGRQMESTQGGR*TAAKPLSYDSDLAG
Trigger: GCCCGCGAGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGGTAAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLKEMHS*VSGLAA
Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGCACATCTCTGCCAGTaGAAAGAGTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLAHLCQ*KECRLS
Trigger: GGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTGC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCCAGTCTCCTTTaGCGACGGCTTCAATGGTAT +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSACPSLL*RRLQWY
Trigger: ATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGCA...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGATGTGCGGACCTTCTaGCGAGGGGTATCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKADVRTF*RGVSPS
Trigger: ACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTGCTTCCCTTGCCACTaGAGGATGTGCGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARCFPCH*RMCGPS
Trigger: AGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGCTTCCCTTGCCACTaGAGGATGTGCGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFCFPCH*RMCGPS
Trigger: AGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTCCAAAATGCTTCCCTaGCCACTTGAGGATGTGCGG +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPSKMLP*PLEDVR
Trigger: CCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAATTCTTCATCCAGCTTaGCGGAGCCAAGGAGACAGT +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVILHPA*RSQGDS
Trigger: ACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAAT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCCCACCAAAGGTTCTaGCGTTGTTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFAHQRF*RCCWLW
Trigger: CCAGAGCCAACAACAACGCAAGAACCTTTGGTGGGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGCCCACCAAAGGTTCTaGCGTTGTTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LKMALKTCSANQAVHSNCAHQRF*RCCWLW
Trigger: CCAGAGCCAACAACAACGCAAGAACCTTTGGTGGGC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTTAAAATTTGGTAGTTaGTGCTGTGACGCAAGAGTG +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQALKFGS*CCDARV
Trigger: CACTCTTGCGTCACAGCACAAACTACCAAATTTTAA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTGAAATGGAGAAAACGTaGCTGAGCCAGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCEMEKT*LSQLLS
Trigger: GCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTC...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp TCAGTTTCACCAACATCTTGCTCTAGGCCATCGGCCCCAAGAAGTTaGACTATGTGCCAGGCACCATTCTCATTTCTGAGGCAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SVSPTSCSRPSAPRS*TMCQAPFSFLRQEE
Trigger: TTCCTCTTGCCTCAGAAATGAGAATGGTGCCTGGCACATAGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431630.5
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCACACTCCG +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDHTP
Trigger: CGGAGTGTGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456419.5
CDS GCA 90 bp CATTTGTCATTGCAGTCTGTCTCAGTTGCTTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTGTCATCTCCTGCTGGTGATACCCGG +
Preference number: 5 (lower is better)
Translates to: HLSLQSVSVALGRLL*SCSFGLSSPAGDTR
Trigger: CCGGGTATCACCAGCAGGAGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458347.1
CDS CCA 90 bp AGATGGGAAGGCCCAAAGTTTCTTTCGTGGATTGACAGTGGGTGTTaGGGATTTCACAGGCTTGTTTGTGGTAGGACACCATTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: RWEGPKFLSWIDSGC*GFHRLVCGRTPFVA
Trigger: GGCTACAAATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTTCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
ENST00000497629.1
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTATCGGCCCCAAGAAGTaGAACCTTATCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTIGPKK*NLINIL
Trigger: GAGGATATTGATAAGGTTCAACTTCTTGGGGCCGAT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCATCGGCCCCAAGAAGTaGAACCTTATCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAIGPKK*NLINIL
Trigger: GAGGATATTGATAAGGTTCAACTTCTTGGGGCCGAT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTACTCAGGCCTCCCATTaGAGTAGGATCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKATQASH*SRISHS
Trigger: GGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTACTCAGGCCTCCCATTaGAGTAGGATCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFTQASH*SRISHS
Trigger: GGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLEDCLF*QVFLGV
Trigger: CACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGATGTGCGGACCTTCTaGCGAGGGGTATCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLDVRTF*RGVSPS
Trigger: ACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGGAGGTCTTGACTCTTaGGTGGTGTCTGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAGGLDS*VVSEDF
Trigger: GAAATCCTCAGACACCACCAAAGAGTCAAGACCTCC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCAGGCTTCACCAGAAATGTTCTaGCTAGCAGAAATACTAATG +
Preference number: 5 (lower is better)
Translates to: DHEAEHTPLTMVHLPAQASPEMF*LAEILM
Trigger: CATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGA...AGCCTGGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCCAAAGGTTCTTGCGTaGTTGTTGGCTCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAPKVLA*LLALEC
Trigger: ACACTCCAGAGCCAACAACAACGCAAGAACCTTTGG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAVLCEH*SLQSVS
Trigger: TGAGACAGACTGCAATGACAAATGCTCACACAACAC...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTVLCEH*SLQSVS
Trigger: TGAGACAGACTGCAATGACAAATGCTCACACAACAC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSPTSV*CEHLSL
Trigger: CAATGACAAATGCTCACACAACACCGAGGTCGGGGA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTATATTTTCCACCACTaGGACTCACTAGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAYIFHH*DSLASL
Trigger: GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTAGCCAGTTAATCCACTaGGCGCTGCTTATGTATGGT +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLSQLIH*ALLMYG
Trigger: ACCATACATAAGCAGCGCCAAGTGGATTAACTGGCT...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTCATCATTCCGATGCTTaGCTACCCTCTTTACCTGCT +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLHHSDA*LPSLPA
Trigger: AGCAGGTAAAGAGGGTAGCAAAGCATCGGAATGATG...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTTATCCCCACTTCCTTaGCTGGTTTTAGTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTLSPLP*LVLVGS
Trigger: AGAACCGACTAAAACCAGCAAAGGAAGTGGGGATAA...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406780.5
ENST00000415149.6
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACTTTCGCCGA +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDFRR
Trigger: TCGGCGAAAGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CCA 90 bp TGCTTCCCTGTACGAACAGTTTGCATACTTACCCAGGAAGGCAAATaGAAAGTACACAGGGAGGAAGATGAACTGCGGCAAAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: CFPVRTVCILTQEGK*KVHREEDELRQSLC
Trigger: ACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGGTAAGTATGCAAACTGTTCGTACAGGGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAACTGCGGCAAAGCCTTaGTCATATGATAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWETAAKP*SYDSDL
Trigger: GAGGTCACTATCATATGACAAAGGCTTTGCCGCAGT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTATCGGCCCCAAGAAGTaGAACCTTATCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCIGPKK*NLINIL
Trigger: GAGGATATTGATAAGGTTCAACTTCTTGGGGCCGAT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFKEMHS*VSGLAA
Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGGGGATTTCACAGGCTaGTTTGTGGTAGGACACCAT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFGDFTG*FVVGHH
Trigger: ATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAGCATTTCTTCAGTCTTaGCTTTCTTGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEAFLQS*LSWGLA
Trigger: TGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGC...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGCATTTCTTCAGTCTTaGCTTTCTTGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAAFLQS*LSWGLA
Trigger: TGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACAGAGTGGGACGTACTaGAAGATATCTCGGCAAACT +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEQSGTY*KISRQT
Trigger: AGTTTGCCGAGATATCTTCAAGTACGTCCCACTCTG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCCAGAGTGGGACGTACTaGAAGATATCTCGGCAAACT +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAQSGTY*KISRQT
Trigger: AGTTTGCCGAGATATCTTCAAGTACGTCCCACTCTG...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTAAACAAGGCAGATGTTaGACACTGCTTTGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTKQGRC*TLLCRS
Trigger: GCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCCCAACTGCGAAGTGTTaGAAGAAATCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAPTAKC*KKSLQT
Trigger: AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGG...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTTTAGCTTTTCTGGCTaGTTTAATGCTGCGGGATCC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLFSFSG*FNAAGS
Trigger: GGATCCCGCAGCATTAAACAAGCCAGAAAAGCTAAA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTTAGCTTTTCTGGCTaGTTTAATGCTGCGGGATCC +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCFSFSG*FNAAGS
Trigger: GGATCCCGCAGCATTAAACAAGCCAGAAAAGCTAAA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAEDCLF*QVFLGV
Trigger: CACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTC...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGTTTTTCTTTGGTGGCTaGGCATCCAAAATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLFFFGG*ASKMLP
Trigger: GGGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAA...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGGAGGTCTTGACTCTTaGGTGGTGTCTGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARGGLDS*VVSEDF
Trigger: GAAATCCTCAGACACCACCAAAGAGTCAAGACCTCC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTTTGGCTTTGTCTTCTaGAACTTCTTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLFGFVF*NFLLPL
Trigger: CAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGATTCTTCATCCAGCTTaGCGGAGCCAAGGAGACAGT +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARILHPA*RSQGDS
Trigger: ACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAAT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATTCTTCATCCAGCTTaGCGGAGCCAAGGAGACAGT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFILHPA*RSQGDS
Trigger: ACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCAAAGGTTCTTGCGTaGTTGTTGGCTCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPKVLA*LLALEC
Trigger: ACACTCCAGAGCCAACAACAACGCAAGAACCTTTGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCCCACCAAAGGTTCTaGCGTTGTTGTTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEAHQRF*RCCWLW
Trigger: CCAGAGCCAACAACAACGCAAGAACCTTTGGTGGGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGTTGTTCCTTTGGTTaGTCATCCAAAGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPASCSFG*SSKVPP
Trigger: AGGAGGTACTTTGGATGACAAACCAAAGGAACAACT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVCEHLS*QSVSVA
Trigger: AGCAACTGAGACAGACTGCAATGACAAATGCTCACA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLVLCEH*SLQSVS
Trigger: TGAGACAGACTGCAATGACAAATGCTCACACAACAC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGCAACAAGCACTTGTTaGCAGTCTATATTTTCCACC +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTATSTC*QSIFST
Trigger: GGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPAWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTATTTCACACTCTCTGGTaGGTAAAAGAGATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVFHTLW*VKEMLG
Trigger: ACCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAA...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGTGGGTGCTTCTCCTTaGCTGTATGGAATGCCATCC +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDVGASP*LYGMPS
Trigger: GGATGGCATTCCATACAGCAAAGGAGAAGCACCCAC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGGTAGCCCATTAGGATaGGCCTTATATGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARGSPLG*ALYEGS
Trigger: AGAGCCCTCATATAAGGCCAATCCTAATGGGCTACC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTATTTTCAGCAATACATaGTTCTCTCTGGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTIFSNT*FSLEEA
Trigger: TGCCTCCTCCAGAGAGAACAATGTATTGCTGAAAAT...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTCTGAGAGCAAGAGACTaGTTTAGTGCTAATGAAATG +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFLRARD*FSANEM
Trigger: CATTTCATTAGCACTAAACAAGTCTCTTGCTCTCAG...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGAAATTCAAGATGATTTaGCTCTTTCAGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLKFKMI*LFQPAP
Trigger: GGGGGCAGGCTGAAAGAGCAAAATCATCTTGAATTT...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTATCCCCACTTCCTTaGCTGGTTTTAGTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCLSPLP*LVLVGS
Trigger: AGAACCGACTAAAACCAGCAAAGGAAGTGGGGATAA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406780.5
ENST00000415149.6
CDS TCA 90 bp AGGCATTTCTTCAGTCTTTGCTTTCTTGGGGCTTGGCAAGTCTCTTaGAGAGTCAGATGGGAAGGCCCAAAGTTTCTTTCGTGGATTGAC +
Preference number: 5 (lower is better)
Translates to: RHFFSLCFLGAWQVS*RVRWEGPKFLSWID
Trigger: GTCAATCCACGAAAGAAACTTTGGGCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDLPH
Trigger: ATGAGGAAGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456817.5
CDS TCA 90 bp CCTGCATGTGCCAGAGGATACCAGTCAAGTCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGAACTTCCAGCTTCTGTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: PACARGYQSSQDFPL*FQWNIRTSSFCDAA
Trigger: TGCTGCATCACAGAAGCTGGAAGTTCTGATGTTCCACTGAAATCACAATGGAAAGTCTTGACTTGACTGGTATCCTCTGGCACATGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485939.5
CDS GCA 90 bp CATTTGTCATTGCAGTCTGTCTCAGTTGCTTTAGGGAGACTCCTCTaGAGTTGTTCCTTTGGTTTGTCATCCAAAGTACCTCCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HLSLQSVSVALGRLL*SCSFGLSSKVPPAG
Trigger: ACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTACTGCGGCAAAGCCTTaGTCATATGATAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFTAAKP*SYDSDL
Trigger: GAGGTCACTATCATATGACAAAGGCTTTGCCGCAGT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp AGAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCATCGGCCCCAAGAAGTaGAACCTTATCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: RIYGPRGRAYTTNNGTSAIGPKK*NLINIL
Trigger: GAGGATATTGATAAGGTTCAACTTCTTGGGGCCGAT...GGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDKEMHS*VSGLAA
Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAGAGAGCGATGGCGTTaGCAAAATAAAAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPARERWR*QNKRNA
Trigger: TGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGGGGATTTCACAGGCTaGTTTGTGGTAGGACACCAT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDGDFTG*FVVGHH
Trigger: ATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSFFRG*TVGVGD
Trigger: ATCCCCAACACCCACTGTCAATCCACGAAAGAAACT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGCATTTCTTCAGTCTTaGCTTTCTTGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARAFLQS*LSWGLA
Trigger: TGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGC...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCATTTCTTCAGTCTTaGCTTTCTTGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFAFLQS*LSWGLA
Trigger: TGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAACTCAGGCCTCCCATTaGAGTAGGATCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGTQASH*SRISHS
Trigger: GGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAGAGTGGGACGTACTaGAAGATATCTCGGCAAACT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQSGTY*KISRQT
Trigger: AGTTTGCCGAGATATCTTCAAGTACGTCCCACTCTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGCACATCTCTGCCAGTaGAAAGAGTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLAHLCQ*KECRLS
Trigger: GGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTGC...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAEDCLF*QVFLGV
Trigger: CACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTC...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATGCCCCAGTCTCCTTTaGCGACGGCTTCAATGGTAT +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKCPSLL*RRLQWY
Trigger: ATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGCA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCCAAAATGCTTCCCTaGCCACTTGAGGATGTGCGG +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSKMLP*PLEDVR
Trigger: CCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTCACCAGAAATGTTCTaGCTAGCAGAAATACTAATG +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFSPEMF*LAEILM
Trigger: CATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAATTTGGCTTTGTCTTCTaGAACTTCTTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEFGFVF*NFLLPL
Trigger: CAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAA...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCTGTAACAGGACTATATaGAGGGAGGCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPACNRTI*REAVEF
Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTGTTACA...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGACTGGAAAGGACCTTaGCTGGTTTTAGTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFDWKGP*LVLVGS
Trigger: AGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCTTTTTCCGGAACATaGGGCTTCTCCTTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPFSGT*GFSFLC
Trigger: GCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000416476.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGTTGGCTCTGGAGTGTaGAAAATGGATGGGATATTT +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLVGSGV*KMDGIF
Trigger: AAATATCCCATCCATTTTCAACACTCCAGAGCCAAC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAGTTGTTCCTTTGGTTaGTCATCCAAAGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCSCSFG*SSKVPP
Trigger: AGGAGGTACTTTGGATGACAAACCAAAGGAACAACT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGAGACTCCTCTGCAGTaGTTCCTTTGGTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFETPLQ*FLWFVI
Trigger: GATGACAAACCAAAGGAACAACTGCAGAGGAGTCTC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPCEHLS*QSVSVA
Trigger: AGCAACTGAGACAGACTGCAATGACAAATGCTCACA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSPTSV*CEHLSL
Trigger: CAATGACAAATGCTCACACAACACCGAGGTCGGGGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSESPTSV*CEHLSL
Trigger: CAATGACAAATGCTCACACAACACCGAGGTCGGGGA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLSPTSV*CEHLSL
Trigger: CAATGACAAATGCTCACACAACACCGAGGTCGGGGA...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGCAACAAGCACTTGTTaGCAGTCTATATTTTCCACC +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLATSTC*QSIFST
Trigger: GGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGGCAACAAGCACTTGTTaGCAGTCTATATTTTCCACC +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLATSTC*QSIFST
Trigger: GGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGC...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGAGCCAGTTAATCCACTaGGCGCTGCTTATGTATGGT +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARSQLIH*ALLMYG
Trigger: ACCATACATAAGCAGCGCCAAGTGGATTAACTGGCT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGAGTGGGGAAATACTTaGTGCTATAGAACAAATACC +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTEWGNT*CYRTNT
Trigger: GGTATTTGTTCTATAGCACAAAGTATTTCCCCACTC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCTATTTTAACATGGCTTaGGGACATGGCATCGGTAGA +
Preference number: 5 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACYFNMA*GHGIGR
Trigger: TCTACCGATGCCATGTCCCAAAGCCATGTTAAAATA...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCTAGCGAGTGGTCCAAAACTCCAACAGCCACCAACATCGGGACCCAGCAATTTTTCAGATGCTCCTTTTaGTTCATAGTGTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: ASEWSKTPTATNIGTQQFFRCSF*FIVFHH
Trigger: ATGATGGAACACTATGAACAAAAAGGAGCATCTGAA...AAATTGCTGGGTCCCGATGTTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTATTTTCAGCAATACATaGTTCTCTCTGGAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCIFSNT*FSLEEA
Trigger: TGCCTCCTCCAGAGAGAACAATGTATTGCTGAAAAT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCACCATAGATCAAATTaGGCCAGAAGAGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: LTSASSESGPCGATSTCLHHRSN*ARRGTF
Trigger: AAAGGTTCCTCTTCTGGCCAAATTTGATCTATGGTG...CAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTCTGAAAATATGGCTTaGCTGGTTTTAGTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTSENMA*LVLVGS
Trigger: AGAACCGACTAAAACCAGCAAAGCCATATTTTCAGA...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTTTTCCTCTGCCAGTaGAAAGAGTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVFLCQ*KECRLS
Trigger: GGAAAGTCTGCACTCTTTCAACTGGCAGAGGAAAAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416476.6
CDS TCA 90 bp AGCAGGATTCCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGACCTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: SRIPGRQMESTQGGR*TAAKPLSYDSDLQK
Trigger: TTTCTGAAGGTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGAATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431630.5
ENST00000449335.5
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCACTGCGGCAAAGCCTTaGTCATATGATAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLTAAKP*SYDSDL
Trigger: GAGGTCACTATCATATGACAAAGGCTTTGCCGCAGT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp ATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTAATCAAGAAGTTTCTTaGCTAGCAATGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: MLTSASSESGPCGATSTCNQEVS*LAMDAT
Trigger: AGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATT...ACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTATCGGCCCCAAGAAGTaGAACCTTATCAATATCCTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFIGPKK*NLINIL
Trigger: GAGGATATTGATAAGGTTCAACTTCTTGGGGCCGAT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGGTAGTAAGAGAGCGATGGCGTTaGCAAAATAAAAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: FHHLDSLASLGKDKARVVRERWR*QNKRNA
Trigger: TGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCT...TACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARQSASI*VAPRLS
Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFQSASI*VAPRLS
Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGCATCCTTATACTCCTaGGCCATGTCTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: LKMALKTCSANQAVHSNCASLYS*AMSVYF
Trigger: GAAATACACAGACATGGCCAAGGAGTATAAGGATGC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCATCCTTATACTCCTaGGCCATGTCTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFASLYS*AMSVYF
Trigger: GAAATACACAGACATGGCCAAGGAGTATAAGGATGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGGGGATTTCACAGGCTaGTTTGTGGTAGGACACCAT +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKGDFTG*FVVGHH
Trigger: ATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSFFRG*TVGVGD
Trigger: ATCCCCAACACCCACTGTCAATCCACGAAAGAAACT...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLSFFRG*TVGVGD
Trigger: ATCCCCAACACCCACTGTCAATCCACGAAAGAAACT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCCAGAGTGGGACGTACTaGAAGATATCTCGGCAAACT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLQSGTY*KISRQT
Trigger: AGTTTGCCGAGATATCTTCAAGTACGTCCCACTCTG...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTAAACAAGGCAGATGTTaGACACTGCTTTGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPKQGRC*TLLCRS
Trigger: GCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTT...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAACCAACTGCGAAGTGTTaGAAGAAATCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWEPTAKC*KKSLQT
Trigger: AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGG...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATGCTTCCCTTGCCACTaGAGGATGTGCGGACCTTCT +
Preference number: 5 (lower is better)
Translates to: HGMFTPTLKRTKPISESKCFPCH*RMCGPS
Trigger: AGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTTTTCTTTGGTGGCTaGGCATCCAAAATGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFFFGG*ASKMLP
Trigger: GGGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTTTGGCTTTGTCTTCTaGAACTTCTTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFFGFVF*NFLLPL
Trigger: CAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp ATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCTGTAACAGGACTATATaGAGGGAGGCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: IYGPRGRAYTTNNGTSACCNRTI*REAVEF
Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTGTTACA...GCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTTGTAACAGGACTATATaGAGGGAGGCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLCNRTI*REAVEF
Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTGTTACA...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAAGAAGAGTTGCTTGTTaGACCATTTATCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWERRVAC*TIYPHF
Trigger: GAAGTGGGGATAAATGGTCAAACAAGCAACTCTTCT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCCAAAGGTTCTTGCGTaGTTGTTGGCTCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLPKVLA*LLALEC
Trigger: ACACTCCAGAGCCAACAACAACGCAAGAACCTTTGG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCAAAGGTTCTTGCGTaGTTGTTGGCTCTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPKVLA*LLALEC
Trigger: ACACTCCAGAGCCAACAACAACGCAAGAACCTTTGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTAGTTGTTCCTTTGGTTaGTCATCCAAAGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPSCSFG*SSKVPP
Trigger: AGGAGGTACTTTGGATGACAAACCAAAGGAACAACT...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARCEHLS*QSVSVA
Trigger: AGCAACTGAGACAGACTGCAATGACAAATGCTCACA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFCEHLS*QSVSVA
Trigger: AGCAACTGAGACAGACTGCAATGACAAATGCTCACA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVLCEH*SLQSVS
Trigger: TGAGACAGACTGCAATGACAAATGCTCACACAACAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTATATTTTCCACCACTaGGACTCACTAGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAYIFHH*DSLASL
Trigger: GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGTATATTTTCCACCACTaGGACTCACTAGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARYIFHH*DSLASL
Trigger: GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTATATTTTCCACCACTaGGACTCACTAGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFYIFHH*DSLASL
Trigger: GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTTTTCACACTCTCTGGTaGGTAAAAGAGATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAFHTLW*VKEMLG
Trigger: ACCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAA...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGGATGCTAACTTCTGCTTCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTGCTGCTTATGTATGGTaGGTTTTATGTTCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: RMLTSASSESGPCGATSTAAYVW*VLCSKA
Trigger: TGCTTTTGAACATAAAACCAACCATACATAAGCAGC...AGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CGCAACATCCCCTTTACAAATGATGGCTCCAGGCCTCCTGCAATTTCCTTCCTTGAGTGGGGAAATACTTaGTGCTATAGAACAAATACC +
Preference number: 5 (lower is better)
Translates to: RNIPFTNDGSRPPAISFLEWGNT*CYRTNT
Trigger: GGTATTTGTTCTATAGCACAAAGTATTTCCCCACTC...AAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGCCAATCCTGTTAGTATGTaGTACATATTTTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: YMDHEAEHTPLTMVHLPANPVSM*YIFSST
Trigger: GGTGCTGGAAAATATGTACAACATACTAACAGGATT...GGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAACAAGTTAGTACCATaGTCAAGGTGCATGTTCCGC +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKANKLVP*SRCMFR
Trigger: GCGGAACATGCACCTTGACAATGGTACTAACTTGTT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTCAACAACTTTTTCTCTaGAGGATGCTGTGGGACAAA +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPQQLFL*RMLWDK
Trigger: TTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTTG...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGGGTAGCCCATTAGGATaGGCCTTATATGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLGSPLG*ALYEGS
Trigger: AGAGCCCTCATATAAGGCCAATCCTAATGGGCTACC...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTGTTATCAGGAAATCTTaGGAGGGAGCAGTAATGTTC +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPVIRKS*EGAVMF
Trigger: GAACATTACTGCTCCCTCCAAAGATTTCCTGATAAC...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS GCA 90 bp ACTGACTTATGCTGTGGGAAACTCAGTGAGACAAGGTTTCTGGGGTaGTGTAACCCCAATAAAGCATCTTCCTCTGTGAACAATAAAGAC +
Preference number: 5 (lower is better)
Translates to: TDLCCGKLSETRFLG*CNPNKASSSVNNKD
Trigger: GTCTTTATTGTTCACAGAGGAAGATGCTTTATTGGGGTTACAGCACCCCAGAAACCTTGTCTCACTGAGTTTCCCACAGCATAAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTAATCAAGAAGTTTCTTaGCTAGCAATGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPNQEVS*LAMDAT
Trigger: AGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATT...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDQSASI*VAPRLS
Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLSFFRG*TVGVGD
Trigger: ATCCCCAACACCCACTGTCAATCCACGAAAGAAACT...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCATTTCTTCAGTCTTaGCTTTCTTGGGGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEAFLQS*LSWGLA
Trigger: TGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGAAACAAGGCAGATGTTaGACACTGCTTTGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARKQGRC*TLLCRS
Trigger: GCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAAACAAGGCAGATGTTaGACACTGCTTTGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKAKQGRC*TLLCRS
Trigger: GCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAAACAAGGCAGATGTTaGACACTGCTTTGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFKQGRC*TLLCRS
Trigger: GCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCCAACTGCGAAGTGTTaGAAGAAATCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFPTAKC*KKSLQT
Trigger: AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGGCACATCTCTGCCAGTaGAAAGAGTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEAHLCQ*KECRLS
Trigger: GGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTGC...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTTTGGCTTTGTCTTCTaGAACTTCTTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDFGFVF*NFLLPL
Trigger: CAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTGGAAAGGACCTTaGCTGGTTTTAGTCGGTTCT +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKDWKGP*LVLVGS
Trigger: AGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325805.13
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGAAGAGTTGCTTGTTaGACCATTTATCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFRRVAC*TIYPHF
Trigger: GAAGTGGGGATAAATGGTCAAACAAGCAACTCTTCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGTTGGCTCTGGAGTGTaGAAAATGGATGGGATATTT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFVGSGV*KMDGIF
Trigger: AAATATCCCATCCATTTTCAACACTCCAGAGCCAAC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GGCATGAAAACACCAGTAATCTGTAATCTGCAGGACTCTTCCCCTGTCTGGGAAACAAGGTGTGTAATCTaGGTTTTCCTTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GMKTPVICNLQDSSPVWETRCVI*VFLAFL
Trigger: GAGAAAAGCAAGGAAAACCAAGATTACACACCTTGT...TTCCCAGACAGGGGAAGAGTCCTGCAGATTACAGATTACTGGTGTTTTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGTTGTTCCTTTGGTTaGTCATCCAAAGTACCTCCT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSCSFG*SSKVPP
Trigger: AGGAGGTACTTTGGATGACAAACCAAAGGAACAACT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTCTGCAGTTGTTCCTTaGGTTTGTCATCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFSAVVP*VCHPKY
Trigger: GTACTTTGGATGACAAACCAAAGGAACAACTGCAGA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGAGACTCCTCTGCAGTaGTTCCTTTGGTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKETPLQ*FLWFVI
Trigger: GATGACAAACCAAAGGAACAACTGCAGAGGAGTCTC...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTGCAACAAGCACTTGTTaGCAGTCTATATTTTCCACC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFATSTC*QSIFST
Trigger: GGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGC...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAGTGGGTGCTTCTCCTTaGCTGTATGGAATGCCATCC +
Preference number: 5 (lower is better)
Translates to: HGMFTPTLKRTKPISESKVGASP*LYGMPS
Trigger: GGATGGCATTCCATACAGCAAAGGAGAAGCACCCAC...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp ACTGCCTTTCATTACTGTGACCAGTCAAGTCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGAACTTCCAGCTTCTGTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: TAFHYCDQSSQDFPL*FQWNIRTSSFCDAA
Trigger: TGCTGCATCACAGAAGCTGGAAGTTCTGATGTTCCACTGAAATCACAATGGAAAGTCTTGACTTGACTGGTCACAGTAATGAAAGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000431630.5
ENST00000449335.5
ENST00000454540.5
ENST00000456419.5
ENST00000456817.5
CDS TCA 90 bp GACTACAGTGGAACAATTCGCCTCTGGTATTTCTCAATATCCCAGTaGATCCTCCACATCTATAACATGCTGGAGATGATACCAGGTACT +
Preference number: 5 (lower is better)
Translates to: DYSGTIRLWYFSISQ*ILHIYNMLEMIPGT
Trigger: AGTACCTGGTATCATCTCCAGCATGTTATAGATGTGGAGGATTCACTGGGATATTGAGAAATACCAGAGGCGAATTGTTCCACTGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS TCA 90 bp TACCTTCACAACAGCTCTTACCAGTCAAGTCAAGACTTTCCATTGTaGTTTCAGTGGAACATCAGAACTTCCAGCTTCTGTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: YLHNSSYQSSQDFPL*FQWNIRTSSFCDAA
Trigger: TGCTGCATCACAGAAGCTGGAAGTTCTGATGTTCCACTGAAATCACAATGGAAAGTCTTGACTTGACTGGTAAGAGCTGTTGTGAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406780.5
ENST00000413213.5
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGACTGCGGCAAAGCCTTaGTCATATGATAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHETAAKP*SYDSDL
Trigger: GAGGTCACTATCATATGACAAAGGCTTTGCCGCAGT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGGAAGACACTTTCGTTTaGGTCGTTTTCCAACCCCTT +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLEDTFV*VVFQPL
Trigger: AAGGGGTTGGAAAACGACCAAAACGAAAGTGTCTTC...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAATCAAGAAGTTTCTTaGCTAGCAATGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKANQEVS*LAMDAT
Trigger: AGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAATCAAGAAGTTTCTTaGCTAGCAATGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFNQEVS*LAMDAT
Trigger: AGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTAGAGAGCGATGGCGTTaGCAAAATAAAAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFRERWR*QNKRNA
Trigger: TGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGAGAGCGATGGCGTTaGCAAAATAAAAGAAATGCA +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKARERWR*QNKRNA
Trigger: TGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLQSASI*VAPRLS
Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGCATCCTTATACTCCTaGGCCATGTCTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEASLYS*AMSVYF
Trigger: GAAATACACAGACATGGCCAAGGAGTATAAGGATGC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGCATCCTTATACTCCTaGGCCATGTCTGTGTATTTC +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGASLYS*AMSVYF
Trigger: GAAATACACAGACATGGCCAAGGAGTATAAGGATGC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHESFFRG*TVGVGD
Trigger: ATCCCCAACACCCACTGTCAATCCACGAAAGAAACT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTTGTAACAGGACTATATaGAGGGAGGCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFCNRTI*REAVEF
Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTGTTACA...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAGAAGAGTTGCTTGTTaGACCATTTATCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLRRVAC*TIYPHF
Trigger: GAAGTGGGGATAAATGGTCAAACAAGCAACTCTTCT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACGTTGGCTCTGGAGTGTaGAAAATGGATGGGATATTT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDVGSGV*KMDGIF
Trigger: AAATATCCCATCCATTTTCAACACTCCAGAGCCAAC...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCACAAGGTGTGTAATCTaGGTTTTCCTTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LKMALKTCSANQAVHSNCTRCVI*VFLAFL
Trigger: GAGAAAAGCAAGGAAAACCAAGATTACACACCTTGT...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAGGACAAGGTGTGTAATCTaGGTTTTCCTTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: YIFHHLDSLASLGKDKARTRCVI*VFLAFL
Trigger: GAGAAAAGCAAGGAAAACCAAGATTACACACCTTGT...CCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTACAAGGTGTGTAATCTaGGTTTTCCTTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFTRCVI*VFLAFL
Trigger: GAGAAAAGCAAGGAAAACCAAGATTACACACCTTGT...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTCTGCAGTTGTTCCTTaGGTTTGTCATCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSAVVP*VCHPKY
Trigger: GTACTTTGGATGACAAACCAAAGGAACAACTGCAGA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGCEHLS*QSVSVA
Trigger: AGCAACTGAGACAGACTGCAATGACAAATGCTCACA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLVLCEH*SLQSVS
Trigger: TGAGACAGACTGCAATGACAAATGCTCACACAACAC...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTTTCACACTCTCTGGTaGGTAAAAGAGATGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEFHTLW*VKEMLG
Trigger: ACCCAGCATCTCTTTTACCAACCAGAGAGTGTGAAA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCATCACTTTGCATCTGTaGCTAGGAAACAAGACACTG +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLITLHL*LGNKTL
Trigger: CAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTGAT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGCATCATTCCGATGCTTaGCTACCCTCTTTACCTGCT +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEHHSDA*LPSLPA
Trigger: AGCAGGTAAAGAGGGTAGCAAAGCATCGGAATGATG...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGAACAAGTTAGTACCATaGTCAAGGTGCATGTTCCGC +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSENKLVP*SRCMFR
Trigger: GCGGAACATGCACCTTGACAATGGTACTAACTTGTT...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GAATATATGGACCACGAGGCCGAGCATACACCACTAACAATGGTACATCTGCCTTTCAGATGCTCCTTTTaGTTCATAGTGTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: EYMDHEAEHTPLTMVHLPFRCSF*FIVFHH
Trigger: ATGATGGAACACTATGAACAAAAAGGAGCATCTGAA...AGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTGTGGAGCAGTGCAATaGAAGGTGAATCTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHECGAVQ*KVNLLN
Trigger: GTTGAGGAGATTCACCTTCAATTGCACTGCTCCACA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACCACCATAGATCAAATTaGGCCAGAAGAGGAACCTTT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDHHRSN*ARRGTF
Trigger: AAAGGTTCCTCTTCTGGCCAAATTTGATCTATGGTG...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp TCAAGTGAATCTGGGCCGTGTGGGGCAACAAGCACTTGTTTGCAGTCTATATTTCTGAGAGCAAGAGACTaGTTTAGTGCTAATGAAATG +
Preference number: 5 (lower is better)
Translates to: SSESGPCGATSTCLQSIFLRARD*FSANEM
Trigger: CATTTCATTAGCACTAAACAAGTCTCTTGCTCTCAG...AAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAAATGATCACACTTCCTaGATCATGCTGAGACCAGCT +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGNDHTS*IMLRPA
Trigger: AGCTGGTCTCAGCATGATCAAGGAAGTGTGATCATT...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406780.5
CDS GCA 90 bp TTTCACAGGCTTGTTTGTGGTAGGACACCATTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTTATACTCCTTGGCCATGTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: FHRLVCGRTPFVARI*FHKCILILLGHVCV
Trigger: TACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAATGGTGTCCTACCACAAACAAGCCTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000449213.5
ENST00000456419.5
ENST00000497629.1
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAATCAAGAAGTTTCTTaGCTAGCAATGGATGCCACT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLNQEVS*LAMDAT
Trigger: AGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACCAACTGCGAAGTGTTaGAAGAAATCTCTGCAAACT +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGPTAKC*KKSLQT
Trigger: AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGCACATCTCTGCCAGTaGAAAGAGTGCAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVIAHLCQ*KECRLS
Trigger: GGAAAGTCTGCACTCTTTCAACTGGCAGAGATGTGC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGGAGGTCTTGACTCTTaGGTGGTGTCTGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVIGGLDS*VVSEDF
Trigger: GAAATCCTCAGACACCACCAAAGAGTCAAGACCTCC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTTTGGCTTTGTCTTCTaGAACTTCTTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEFGFVF*NFLLPL
Trigger: CAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTGTAACAGGACTATATaGAGGGAGGCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLCNRTI*REAVEF
Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTGTTACA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAAGAAGAGTTGCTTGTTaGACCATTTATCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKRRVAC*TIYPHF
Trigger: GAAGTGGGGATAAATGGTCAAACAAGCAACTCTTCT...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGGTTGGCTCTGGAGTGTaGAAAATGGATGGGATATTT +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEVGSGV*KMDGIF
Trigger: AAATATCCCATCCATTTTCAACACTCCAGAGCCAAC...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGTTGGCTCTGGAGTGTaGAAAATGGATGGGATATTT +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGVGSGV*KMDGIF
Trigger: AAATATCCCATCCATTTTCAACACTCCAGAGCCAAC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAATCTGCAGTTGTTCCTTaGGTTTGTCATCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: LFAVYIFHHLDSLASLGKSAVVP*VCHPKY
Trigger: GTACTTTGGATGACAAACCAAAGGAACAACTGCAGA...TTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCTGCAGTTGTTCCTTaGGTTTGTCATCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSAVVP*VCHPKY
Trigger: GTACTTTGGATGACAAACCAAAGGAACAACTGCAGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTCTGCAGTTGTTCCTTaGGTTTGTCATCCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSESAVVP*VCHPKY
Trigger: GTACTTTGGATGACAAACCAAAGGAACAACTGCAGA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTCTGCTCAGTATCAGACAGATAACCTTACCCTCAAAGATTCTGGGTTCTGAGTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 5 (lower is better)
Translates to: FLLSIRQITLPSKILGSEWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...CTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CTCAAAATGGCTCTAAAAACCTGCAGTGCCAATCAGGCTGTGCATAGCAATTGCGCTGCTTATGTATGGTaGGTTTTATGTTCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LKMALKTCSANQAVHSNCAAYVW*VLCSKA
Trigger: TGCTTTTGAACATAAAACCAACCATACATAAGCAGC...GCAATTGCTATGCACAGCCTGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AGAGACTTGTTTAGTGCTAATGAAATGGAGAAAACGTTGCTGAGCCAGTTGCTGATCACTTTGCATCTGTaGCTAGGAAACAAGACACTG +
Preference number: 5 (lower is better)
Translates to: RDLFSANEMEKTLLSQLLITLHL*LGNKTL
Trigger: CAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTGAT...CAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCTTAAAATTTGGTAGTTaGTGCTGTGACGCAAGAGTG +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLLKFGS*CCDARV
Trigger: CACTCTTGCGTCACAGCACAAACTACCAAATTTTAA...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACAAGGCTAATCCTGTTAGTATGTaGTACATATTTTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: VYIFHHLDSLASLGKDKANPVSM*YIFSST
Trigger: GGTGCTGGAAAATATGTACAACATACTAACAGGATT...AGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGACAACAACTTTTTCTCTaGAGGATGCTGTGGGACAAA +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGQQLFL*RMLWDK
Trigger: TTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTTG...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AAGCACTTGTTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCAAACATTTCCATACATaGAGCCAAAGACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: KHLFAVYIFHHLDSLASLKHFHT*SQRLQS
Trigger: ACTCTGCAGTCTTTGGCTCAATGTATGGAAATGTTT...GAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAACAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGAGTTATCAGGAAATCTTaGGAGGGAGCAGTAATGTTC +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGVIRKS*EGAVMF
Trigger: GAACATTACTGCTCCCTCCAAAGATTTCCTGATAAC...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS TCA 90 bp CAAGGTTTCTGGGGTGCTGTAACCCCAATAAAGCATCTTCCTCTGTaGACAATAAAGACCCTTATGTCATTACTAATTGTCATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QGFWGAVTPIKHLPL*TIKTLMSLLIVILL
Trigger: AAGCAGGATGACAATTAGTAATGACATAAGGGTCTTTATTGTTCACAGAGGAAGATGCTTTATTGGGGTTACAGCACCCCAGAAACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS TCA 90 bp TCAGTTTCACCAACATCTTGCTCTAGGCCATCGGCCCCAAGAAGTTaGACCTATTACCACCAAAAACAAAGCCAGATCTTTAACATATTT +
Preference number: 5 (lower is better)
Translates to: SVSPTSCSRPSAPRS*TYYHQKQSQIFNIF
Trigger: AAATATGTTAAAGATCTGGCTTTGTTTTTGGTGGTAATAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497629.1
CDS GCA 90 bp GCTTCAATGGTATATATGACGCTCTCAATGTCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTCTTGGGTGTGGATTTATCATTTCCA +
Preference number: 5 (lower is better)
Translates to: ASMVYMTLSMSDSED*LFLQVFLGVDLSFP
Trigger: TGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATACCATTGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTCACCAGAAATGTTCTaGCTAGCAGAAATACTAATG +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSPEMF*LAEILM
Trigger: CATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTCCTTTTTCCGGAACATaGGGCTTCTCCTTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVIPFSGT*GFSFLC
Trigger: GCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325805.13
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTGAGACTCCTCTGCAGTaGTTCCTTTGGTTTGTCATC +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVIETPLQ*FLWFVI
Trigger: GATGACAAACCAAAGGAACAACTGCAGAGGAGTCTC...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGTGGGGCAACAAGCACTaGTTTGCAGTCTATATTTTC +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEWGNKH*FAVYIF
Trigger: GAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCA...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS-3UTR CAA 90 bp TTTGCAGTCTATATTTTCCACCACTTGGACTCACTAGCATCCCTCGGTAAAGACTCTGGAACTGCTCACTaGATTTATTCCTACATGAAT +
Preference number: 5 (lower is better)
Translates to: FAVYIFHHLDSLASLGKDSGTAH*IYSYMN
Trigger: ATTCATGTAGGAATAAATCAAGTGAGCAGTTCCAGA...GTCTTTACCGAGGGATGCTAGTGAGTCCAAGTGGTGGAAAATATAGACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTGTGGAGCAGTGCAATaGAAGGTGAATCTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVICGAVQ*KVNLLN
Trigger: GTTGAGGAGATTCACCTTCAATTGCACTGCTCCACA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CAAGTTACCACCTATTACCGTCAAAAGCCTTCAATAGAAAGCAAAGCTCCAGGATCACCAGAAATGTTCTaGCTAGCAGAAATACTAATG +
Preference number: 5 (lower is better)
Translates to: QVTTYYRQKPSIESKAPGSPEMF*LAEILM
Trigger: CATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGA...TCCTGGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS-3UTR CAA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAATATTTTAACATGGCTTaGGGACATGGCATCGGTAGA +
Preference number: 5 (lower is better)
Translates to: HGMFTPTLKRTKPISESKYFNMA*GHGIGR
Trigger: TCTACCGATGCCATGTCCCAAAGCCATGTTAAAATA...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp GCAAACTACCATTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACCACGAGAAACATTTCCATACATaGAGCCAAAGACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ANYHSGGKYKSAEYMDHEKHFHT*SQRLQS
Trigger: ACTCTGCAGTCTTTGGCTCAATGTATGGAAATGTTT...CTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCAGAATGGTAGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp CATGGCATGTTTACACCAACTCTAAAGAGAACCAAGCCAATTTCTGAAAGCAAAACAAGGTGTGTAATCTaGGTTTTCCTTGCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: HGMFTPTLKRTKPISESKTRCVI*VFLAFL
Trigger: GAGAAAAGCAAGGAAAACCAAGATTACACACCTTGT...TTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS-3UTR CAA 90 bp AATTCAAACCTACGAGAAGAGTTTATAATCTGGTATGTGGAGTCTCAGGTGATTTCTGGAACTGCTCACTaGATTTATTCCTACATGAAT +
Preference number: 5 (lower is better)
Translates to: NSNLREEFIIWYVESQVISGTAH*IYSYMN
Trigger: ATTCATGTAGGAATAAATCAAGTGAGCAGTTCCAGA...AATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTTGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325805.13
ENST00000415149.6
CDS CAA 72 bp GGCGGCCACGAGCCGCCCGCCGGCGTGAGGGCTCTGTaGTTGTTTTCCTGGGGCCGCTCCAGCCCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: GGHEPPAGVRAL*LFSWGRSSPRP
Trigger: GGGGCGCGGGCTGGAGCGGCCCCAGGAAAACAACAACAGAGCCCTCACGCCGGCGGGCGGCTCGTGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS GCA 72 bp CGGCGCCCGTGCCCCTCTCAGGCGGCGCTGCCTGTGTaGCGAGAGGTGCTGGTTGCAAACGCAGCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: RRPCPSQAALPV*REVLVANAAWH
Trigger: GTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGAGAGGGGCACGGGCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS GCA 72 bp GCCCCTCTCAGGCGGCGCTGCCTGTGTGCCGAGAGGTaGTGGTTGCAAACGCAGCCTGGCACCGGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: APLRRRCLCAER*WLQTQPGTGWP
Trigger: AGGCCAGCCGGTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGAGAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CAA 90 bp CGTGCCCCTCTCAGGCGGCGCTGCCTGTGTGCCGAGAGGTGCTGGTaGCAAACGCAGCCTGGCACCGGCTGGCCTACTACTCCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: RAPLRRRCLCAERCW*QTQPGTGWPTTPQP
Trigger: GGGCTGGGGAGTAGTAGGCCAGCCGGTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGAGAGGGGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS GCA 72 bp TCAGGCGGCGCTGCCTGTGTGCCGAGAGGTGCTGGTTaGAAACGCAGCCTGGCACCGGCTGGCCTACTACTC +
Preference number: 6 (lower is better)
Translates to: SGGAACVPRGAG*KRSLAPAGLLL
Trigger: GAGTAGTAGGCCAGCCGGTGCCAGGCTGCGTTTGCAACCAGCACCTCTCGGCACACAGGCAGCGCCGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CCA 72 bp TTGTCATATGATAGTGACTTTCGCCGAGATGAAGTTTaGGGCTCCCCGGGCGGCCACGAGCCGCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: LSYDSDFRRDEV*GSPGGHEPPAG
Trigger: GCCGGCGGGCGGCTCGTGGCCGCCCGGGGAGCCCCAAACTTCATCTCGGCGAAAGTCACTATCATATGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454540.5
CDS CCA 72 bp CCCTCAGCGGCCAGTCAGGGTTTCTCTATGGGAAAGTaGAGAGAAGCTCGCGGAGCCGCTCTGCCTCCGCTT +
Preference number: 6 (lower is better)
Translates to: PSAASQGFSMGK*REARGAALPPL
Trigger: AAGCGGAGGCAGAGCGGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAAACCCTGACTGGCCGCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000474137.1
ENST00000485939.5
CDS CCA 72 bp GTAGCTAGCCCTCAGCGGCCAGTCAGGGTTTCTCTATaGGAAAGTGGAGAGAAGCTCGCGGAGCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: VASPQRPVRVSL*ESGEKLAEPLC
Trigger: GCAGAGCGGCTCCGCGAGCTTCTCTCCACTTTCCCATAGAGAAACCCTGACTGGCCGCTGAGGGCTAGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
ENST00000427402.5
ENST00000474137.1
ENST00000485939.5
CDS GCA 72 bp CTCGCGGAGCCGCTCTGCCTCCGCTTCACTGTACACTaGTCCACATACAGTACATGCAACCCGGAGAGACTG +
Preference number: 6 (lower is better)
Translates to: LAEPLCLRFTVH*STYSTCNPERL
Trigger: CAGTCTCTCCGGGTTGCATGTACTGTATGTGGAGCAGTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415149.6
CDS CCA 72 bp AGCGAGGCTAAAGAACGCAGACACGGCAGGCATTTCTaGAGTACTGCTCCGCGTCTCCCCGACCTCGGTGTT +
Preference number: 6 (lower is better)
Translates to: SEAKERRHGRHF*STAPRLPDLGV
Trigger: AACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS GCA 72 bp CTATGGGAAAGTGGAGAGAAGCTCGCGGAGCCGCTCTaGCTCCGCTTCACTGTACACTGCTCCACATACAGT +
Preference number: 6 (lower is better)
Translates to: LWESGEKLAEPL*LRFTVHCSTYS
Trigger: ACTGTATGTGGAGCAGTGTACAGTGAAGCGGAGGCAGAGCGGCTCCGCGAGCTTCTCTCCACTTTCCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000415149.6
CDS CAA 90 bp GGAGTACTGCTCCGCGTCTCCCCGACCTCGGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCAGTTGCTTTAGGGAGACTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GVLLRVSPTSVLCEH*SLQSVSVALGRLLC
Trigger: GCAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS TCA 72 bp TGGTGGCTTGGCATCCAAAATGCTTCCCTTGCCACTTaGGGATGTGCGGACCTTCTTGCGAGGGGTATCTCC +
Preference number: 6 (lower is better)
Translates to: WWLGIQNASLAT*GCADLLARGIS
Trigger: GGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 90 bp CTGCTCCGCGTCTCCCCGACCTCGGTGTTGTGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCTTTAGGGAGACTCCTCTGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: LLRVSPTSVLCEHLS*QSVSVALGRLLCSC
Trigger: ACAACTGCAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS CAA 90 bp GCAGGCATTTCTGGAGTACTGCTCCGCGTCTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTGCAGTCTGTCTCAGTTGCTTTAGGG +
Preference number: 6 (lower is better)
Translates to: AGISGVLLRVSPTSV*CEHLSLQSVSVALG
Trigger: CCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS GCA 72 bp TGCTTCCCTTGCCACTTGAGGATGTGCGGACCTTCTTaGGAGGGGTATCTCCAAGTTTCTCTATGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: CFPCHLRMCGPS*EGYLQVSLCPS
Trigger: ACTGGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp ATGCTTCCCTTGCCACTTGAGGATGTGCGGACCTTCTaGCGAGGGGTATCTCCAAGTTTCTCTATGCCCCAG +
Preference number: 6 (lower is better)
Translates to: MLPLPLEDVRTF*RGVSPSFSMPQ
Trigger: CTGGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp TTGGTGGCTTGGCATCCAAAATGCTTCCCTTGCCACTaGAGGATGTGCGGACCTTCTTGCGAGGGGTATCTC +
Preference number: 6 (lower is better)
Translates to: LVAWHPKCFPCH*RMCGPSCEGYL
Trigger: GAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp CTCCGCGTCTCCCCGACCTCGGTGTTGTGTGAGCATTaGTCATTGCAGTCTGTCTCAGTTGCTTTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: LRVSPTSVLCEH*SLQSVSVALGR
Trigger: TCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS CAA 72 bp TCTGGAGTACTGCTCCGCGTCTCCCCGACCTCGGTGTaGTGTGAGCATTTGTCATTGCAGTCTGTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: SGVLLRVSPTSV*CEHLSLQSVSV
Trigger: AACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS TCA 72 bp AGTACTGCTCCGCGTCTCCCCGACCTCGGTGTTGTGTaGGCATTTGTCATTGCAGTCTGTCTCAGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: STAPRLPDLGVV*AFVIAVCLSCF
Trigger: AAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS GCA 72 bp TTTTCTTTGGTGGCTTGGCATCCAAAATGCTTCCCTTaGCACTTGAGGATGTGCGGACCTTCTTGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: FSLVAWHPKCFP*HLRMCGPSCEG
Trigger: CCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGCCACCAAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp GTCTCCCCGACCTCGGTGTTGTGTGAGCATTTGTCATaGCAGTCTGTCTCAGTTGCTTTAGGGAGACTCCTC +
Preference number: 6 (lower is better)
Translates to: VSPTSVLCEHLS*QSVSVALGRLL
Trigger: GAGGAGTCTCCCTAAAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000458347.1
CDS GCA 72 bp TGGCATCCAAAATGCTTCCCTTGCCACTTGAGGATGTaGGGACCTTCTTGCGAGGGGTATCTCCAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: WHPKCFPCHLRM*GPSCEGYLQVS
Trigger: AGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCATTTTGGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS TCA 72 bp CCCAGTGAATCCTCCACATCTATAACATGCTGGAGATaGTACCAGGTACTGCTAGAGGCTTGGGGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: PSESSTSITCWR*YQVLLEAWGLP
Trigger: AGGAAGACCCCAAGCCTCTAGCAGTACCTGGTATCATCTCCAGCATGTTATAGATGTGGAGGATTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS GCA 72 bp TTCCTGAGCTTCGTTTTCCTCTGCCAGTTGAAAGAGTaGAGACTTTCCACAGCGTTTTACAGGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: FLSFVFLCQLKE*RLSTAFYRLST
Trigger: GGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCACTCTTTCAACTGGCAGAGGAAAACGAAGCTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416476.6
CDS CCA 72 bp GGCCCAAAGTTTCTTTCGTGGATTGACAGTGGGTGTTaGGGATTTCACAGGCTTGTTTGTGGTAGGACACCA +
Preference number: 6 (lower is better)
Translates to: GPKFLSWIDSGC*GFHRLVCGRTP
Trigger: TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
ENST00000497629.1
CDS CAA 72 bp TTTGGATCAAGAACAGCCCACCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCAAGCCTGGGGTGTTCC +
Preference number: 6 (lower is better)
Translates to: FGSRTAHQSASI*VAPRLSSLGCS
Trigger: GGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000413213.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000449213.5
ENST00000449335.5
ENST00000456419.5
ENST00000497629.1
CDS CAA 72 bp CCTTGCTTTTCTCTTTTGGCTGCCCACCAAAGGTTCTaGCGTTGTTGTTGGCTCTTCTGTAGGGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: PCFSLLAAHQRF*RCCWLFCRVNG
Trigger: GCCATTCACCCTACAGAAGAGCCAACAACAACGCAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443253.1
CDS TCA 72 bp TTGGTAGCACCTCGGTTATCAAGCCTGGGGTGTTCCTaGCGTACAAGAGAGCGATGGCGTTTGCAAAATAAA +
Preference number: 6 (lower is better)
Translates to: LVAPRLSSLGCS*RTRERWRLQNK
Trigger: TTTATTTTGCAAACGCCATCGCTCTCTTGTACGTCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000413213.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000449213.5
ENST00000449271.5
ENST00000449335.5
ENST00000456419.5
ENST00000497629.1
CDS TCA 72 bp AGTCAGATGGGAAGGCCCAAAGTTTCTTTCGTGGATTaGCAGTGGGTGTTGGGGATTTCACAGGCTTGTTTG +
Preference number: 6 (lower is better)
Translates to: SQMGRPKVSFVD*QWVLGISQACL
Trigger: CAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTTCCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
ENST00000497629.1
CDS TCA 72 bp CCCAGTCTCCTTTTGCGACGGCTTCAATGGTATATATaGCGCTCTCAATGTCAGATTCCGAAGACTGCCTCT +
Preference number: 6 (lower is better)
Translates to: PSLLLRRLQWYI*RSQCQIPKTAS
Trigger: AGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATACCATTGAAGCCGTCGCAAAAGGAGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS GCA 72 bp TGCTGTGGGAAACTCAGTGAGACAAGGTTTCTGGGGTaGTGTAACCCCAATAAAGCATCTTCCTCTGTGAAC +
Preference number: 6 (lower is better)
Translates to: CCGKLSETRFLG*CNPNKASSSVN
Trigger: GTTCACAGAGGAAGATGCTTTATTGGGGTTACAGCACCCCAGAAACCTTGTCTCACTGAGTTTCCCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS CCA 72 bp TTTCTATTTTTCTGTGACAGTCACTGTCCTCAGGCTTaGCCTGTCCTGATAGGCTGGGTGGTAGTGCATCTT +
Preference number: 6 (lower is better)
Translates to: FLFFCDSHCPQA*PVLIGWVVVHL
Trigger: AAGATGCACTACCACCCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGACTGTCACAGAAAAATAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp GAGTCAGATGGGAAGGCCCAAAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGATTTCACAGGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: ESDGKAQSFFRG*TVGVGDFTGLF
Trigger: AAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTTCCCATCTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
ENST00000497629.1
CDS CAA 72 bp GTCTGTCTCAGTTGCTTTAGGGAGACTCCTCTGCAGTaGTTCCTTTGGTTTGTCATCCAAAGTACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VCLSCFRETPLQ*FLWFVIQSTSC
Trigger: GCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAAAGCAACTGAGACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
CDS CAA 90 bp TCTCTTGAAGAGTCAGATGGGAAGGCCCAAAGTTTCTTTCGTGGATaGACAGTGGGTGTTGGGGATTTCACAGGCTTGTTTGTGGTAGGA +
Preference number: 6 (lower is better)
Translates to: SLEESDGKAQSFFRG*TVGVGDFTGLFVVG
Trigger: TCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTTCCCATCTGACTCTTCAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000456419.5
ENST00000497629.1
CDS TCA 72 bp CCAGGAAGGCAAATGGAAAGTACACAGGGAGGAAGATaGACTGCGGCAAAGCCTTTGTCATATGATAGTGAC +
Preference number: 6 (lower is better)
Translates to: PGRQMESTQGGR*TAAKPLSYDSD
Trigger: GTCACTATCATATGACAAAGGCTTTGCCGCAGTTCATCTTCCTCCCTGTGTACTTTCCATTTGCCTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000431630.5
ENST00000449335.5
ENST00000454540.5
ENST00000456419.5
ENST00000456817.5
ENST00000474137.1
ENST00000485939.5
CDS TCA 72 bp AAATGCATTCATTGGTCTCCGGGCTCGCTGCTCTGGTaGTTCATCATCTTCAGTTTCACCAACATCTTGCTC +
Preference number: 6 (lower is better)
Translates to: KCIHWSPGSLLW*FIIFSFTNILL
Trigger: GAGCAAGATGTTGGTGAAACTGAAGATGATGAATCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000413213.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000431630.5
ENST00000449213.5
ENST00000449271.5
ENST00000449335.5
ENST00000456419.5
ENST00000458458.5
ENST00000497629.1
CDS CCA 72 bp ACTTATGCTGTGGGAAACTCAGTGAGACAAGGTTTCTaGGGTGCTGTAACCCCAATAAAGCATCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: TYAVGNSVRQGF*GAVTPIKHLPL
Trigger: CAGAGGAAGATGCTTTATTGGGGTTACAGCACCCCAGAAACCTTGTCTCACTGAGTTTCCCACAGCATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS TCA 72 bp GAAAGGACGAGACAGGCAAGGCCCCTGTTCTTATACTaGGCTTCTATTCTGGTCTTATCAATATCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: ERTRQARPLFLY*ASILVLSISSS
Trigger: AGAGGAGGATATTGATAAGACCAGAATAGAAGCTCAGTATAAGAACAGGGGCCTTGCCTGTCTCGTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431630.5
CDS GCA 72 bp GGTATCTCCAAGTTTCTCTATGCCCCAGTCTCCTTTTaGGACGGCTTCAATGGTATATATGACGCTCTCAAT +
Preference number: 6 (lower is better)
Translates to: GISKFLYAPVSF*DGFNGIYDALN
Trigger: ATTGAGAGCGTCATATATACCATTGAAGCCGTCGCAAAAGGAGACTGGGGCATAGAGAAACTTGGAGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp TTGCTAGCAATGGATGCCACTGAAGACACTTTCGTTTaGGTCGTTTTCCAACCCCTTCTCCTTCTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: LLAMDATEDTFV*VVFQPLLLLLN
Trigger: ATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000413213.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000431630.5
ENST00000449213.5
ENST00000449271.5
ENST00000449335.5
ENST00000456419.5
ENST00000456817.5
ENST00000457496.5
ENST00000458458.5
CDS GCA 72 bp TCTGACGTAATTCAGGAGATTCTGAAACATCAGGCCTaGATGTGCCAGAGGATACTGTTCATAGCTGACATT +
Preference number: 6 (lower is better)
Translates to: SDVIQEILKHQA*MCQRILFIADI
Trigger: AATGTCAGCTATGAACAGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472032.1
CDS CAA 72 bp TCTGTGATGCAGCAGGATTCCGTCTGTCTTTTACAGTaGAAGCTTAAACCACAGCTGTTTCACAGGCATTTC +
Preference number: 6 (lower is better)
Translates to: SVMQQDSVCLLQ*KLKPQLFHRHF
Trigger: GAAATGCCTGTGAAACAGCTGTGGTTTAAGCTTCAACTGTAAAAGACAGACGGAATCCTGCTGCATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427402.5
CDS CAA 90 bp GAAGTTTCTTTGCTAGCAATGGATGCCACTGAAGACACTTTCGTTTaGGTCGTTTTCCAACCCCTTCTCCTTCTGCTGAATGATCCTTAT +
Preference number: 6 (lower is better)
Translates to: EVSLLAMDATEDTFV*VVFQPLLLLLNDPY
Trigger: ATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTGTCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000413213.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000431630.5
ENST00000449213.5
ENST00000449271.5
ENST00000449335.5
ENST00000456419.5
ENST00000456817.5
ENST00000457496.5
ENST00000458458.5
CDS CAA 90 bp CTTATGTCATTACTAATTGTCATCCTGCTTCCCTGTACGAACAGTTaGCATACTTACCCAGGAAGGCAAATGGAAAGTACACAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LMSLLIVILLPCTNS*HTYPGRQMESTQGG
Trigger: TCCTCCCTGTGTACTTTCCATTTGCCTTCCTGGGTAAGTATGCAAACTGTTCGTACAGGGAAGCAGGATGACAATTAGTAATGACATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS GCA 72 bp CGCTCTCAATGTCAGATTCCGAAGACTGCCTCTTTTTaGAAGTCTTCTTGGGTGTGGATTTATCATTTCCAT +
Preference number: 6 (lower is better)
Translates to: RSQCQIPKTASF*KSSWVWIYHFH
Trigger: ATGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp ACGCTCTCAATGTCAGATTCCGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTGGATTTATCATTTCCA +
Preference number: 6 (lower is better)
Translates to: TLSMSDSEDCLF*QVFLGVDLSFP
Trigger: TGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 90 bp GTATATATGACGCTCTCAATGTCAGATTCCGAAGACTGCCTCTTTTaGCAAGTCTTCTTGGGTGTGGATTTATCATTTCCATGTCGATCC +
Preference number: 6 (lower is better)
Translates to: VYMTLSMSDSEDCLF*QVFLGVDLSFPCRS
Trigger: GGATCGACATGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS TCA 72 bp GGAACAATTCGCCTCTGGTATTTCTCAATATCCCAGTaGATCCTCCACATCTATAACATGCTGGAGATGATA +
Preference number: 6 (lower is better)
Translates to: GTIRLWYFSISQ*ILHIYNMLEMI
Trigger: TATCATCTCCAGCATGTTATAGATGTGGAGGATTCACTGGGATATTGAGAAATACCAGAGGCGAATTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402543.5
CDS GCA 72 bp CTTGTTTGTGGTAGGACACCATTTGTAGCCAGGATTTaGTTTCATAAATGCATCCTTATACTCCTTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LVCGRTPFVARI*FHKCILILLGH
Trigger: ATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAATGGTGTCCTACCACAAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000325805.13
ENST00000402163.6
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
ENST00000416476.6
ENST00000427402.5
ENST00000429270.1
ENST00000449213.5
ENST00000456419.5
ENST00000497629.1
CDS GCA 72 bp GTATATATGACGCTCTCAATGTCAGATTCCGAAGACTaGCTCTTTTTGCAAGTCTTCTTGGGTGTGGATTTA +
Preference number: 6 (lower is better)
Translates to: VYMTLSMSDSED*LFLQVFLGVDL
Trigger: TAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CCA 72 bp CAGATTCCGAAGACTGCCTCTTTTTGCAAGTCTTCTTaGGTGTGGATTTATCATTTCCATGTCGATCCATTT +
Preference number: 6 (lower is better)
Translates to: QIPKTASFCKSS*VWIYHFHVDPF
Trigger: AAATGGATCGACATGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp TCAGATTCCGAAGACTGCCTCTTTTTGCAAGTCTTCTaGGGTGTGGATTTATCATTTCCATGTCGATCCATT +
Preference number: 6 (lower is better)
Translates to: SDSEDCLFLQVF*GVDLSFPCRSI
Trigger: AATGGATCGACATGGAAATGATAAATCCACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp TTACTAATTGTCATCCTGCTTCCCTGTACGAACAGTTaGCATACTTACCCAGGAAGGCAAATGGAAAGTACA +
Preference number: 6 (lower is better)
Translates to: LLIVILLPCTNS*HTYPGRQMEST
Trigger: TGTACTTTCCATTTGCCTTCCTGGGTAAGTATGCAAACTGTTCGTACAGGGAAGCAGGATGACAATTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS CAA 90 bp AATGGTTCTGCTTTTATACCCTCTGGTGTCTCACCAGAAATGTTCTaGCTAGCAGAAATACTAATGAAATCTGGAGGTCTTGACTCTTTG +
Preference number: 6 (lower is better)
Translates to: NGSAFIPSGVSPEMF*LAEILMKSGGLDSL
Trigger: CAAAGAGTCAAGACCTCCAGATTTCATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGAGACACCAGAGGGTATAAAAGCAGAACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS TCA 72 bp TGGGGTGCTGTAACCCCAATAAAGCATCTTCCTCTGTaGACAATAAAGACCCTTATGTCATTACTAATTGTC +
Preference number: 6 (lower is better)
Translates to: WGAVTPIKHLPL*TIKTLMSLLIV
Trigger: GACAATTAGTAATGACATAAGGGTCTTTATTGTTCACAGAGGAAGATGCTTTATTGGGGTTACAGCACCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474137.1
CDS CAA 72 bp GCAGAAATACTAATGAAATCTGGAGGTCTTGACTCTTaGGTGGTGTCTGAGGATTTCTCCTTTGACATTTTC +
Preference number: 6 (lower is better)
Translates to: AEILMKSGGLDS*VVSEDFSFDIF
Trigger: GAAAATGTCAAAGGAGAAATCCTCAGACACCACCAAAGAGTCAAGACCTCCAGATTTCATTAGTATTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6
CDS CAA 72 bp GCTTTTATACCCTCTGGTGTCTCACCAGAAATGTTCTaGCTAGCAGAAATACTAATGAAATCTGGAGGTCTT +
Preference number: 6 (lower is better)
Translates to: AFIPSGVSPEMF*LAEILMKSGGL
Trigger: AAGACCTCCAGATTTCATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGAGACACCAGAGGGTATAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325805.13
ENST00000402543.5
ENST00000406780.5
ENST00000415149.6