Pregenerated sensors for BBS7 (Homo sapiens)
Ensembl gene IDs: ENSG00000138686Ensembl transcript IDs: ENST00000264499.9, ENST00000505692.1, ENST00000506636.1, ENST00000507814.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCACGCTaGATAGCTCCACTGGTTACAGCATGTCTAATTAAGATCCCCCGA | + |
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Preference number: 1 (lower is better) Translates to: SKMASLFLHSSLEAR*IAPLVTACLIKIPR Trigger: TCGGGGGATCTTAATTAGACATGCTGTAACCAGTGGAGCTATTCAGCGTGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
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| 3UTR TCA 90 bp | ATGACTGATGTAATCTTTTTATCTTTCTGCCCAGCTTCTCTTACATaGTCCTTGGGAAATAGCCAGTTGAAAAGAAATATGGCAAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: MTDVIFLSFCPASLT*SLGNSQLKRNMARY Trigger: ATACCTTGCCATATTTCTTTTCAACTGGCTATTTCCCAAGGATCATGTAAGAGAAGCTGGGCAGAAAGATAAAAAGATTACATCAGTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506636.1 |
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| 3UTR-3UTR GCA 90 bp | GATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTAGCATTTCCACAAACTaGAGCAGAGTCATAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: DTSVGKSKMASLFLHSSLSISTN*SRVIKH Trigger: GTGTTTTATGACTCTGCTGCAGTTTGTGGAAATGCT...AAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTAACAGACCACTTCTTTaGGACTTTACCTTATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LCVSSSYFLATIYSTEPSNRPLL*DFTLFV Trigger: TACAAATAAGGTAAAGTCCCAAAGAAGTGGTCTGTT...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| 3UTR TCA 72 bp | GCATCACTATTTCTGCACTCTTCACTTGAAGCACGCTaGATAGCTCCACTGGTTACAGCATGTCTAATTAAG | + |
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Preference number: 3 (lower is better) Translates to: ASLFLHSSLEAR*IAPLVTACLIK Trigger: CTTAATTAGACATGCTGTAACCAGTGGAGCTATTCAGCGTGCTTCAAGTGAAGAGTGCAGAAATAGTGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
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| 3UTR CCA 72 bp | AACCAGGACACAAAGCAAGTACCAGTACTTGGGTTCTaGTCCCAGCTTTACAAAATATTAGCATGTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: NQDTKQVPVLGF*SQLYKILACPL Trigger: AAGAGGACATGCTAATATTTTGTAAAGCTGGGACCAGAACCCAAGTACTGGTACTTGCTTTGTGTCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTAAACAGACCACTTCTTaGGGACTTTACCTTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: IPRLCVSSSYFLATIYSTKQTTS*GLYLIC Trigger: ACAAATAAGGTAAAGTCCCAAAGAAGTGGTCTGTTT...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| 3UTR TCA 72 bp | TGTCAACTGATTCATGACTGGTTCATGAATCATGACTaGTGTAATCTTTTTATCTTTCTGCCCAGCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CQLIHDWFMNHD*CNLFIFLPSFS Trigger: AGAGAAGCTGGGCAGAAAGATAAAAAGATTACATCAGTCATGATTCATGAACCAGTCATGAATCAGTTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506636.1 |
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| 3UTR TCA 72 bp | GTAATCTTTTTATCTTTCTGCCCAGCTTCTCTTACATaGTCCTTGGGAAATAGCCAGTTGAAAAGAAATATG | + |
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Preference number: 3 (lower is better) Translates to: VIFLSFCPASLT*SLGNSQLKRNM Trigger: CATATTTCTTTTCAACTGGCTATTTCCCAAGGATCATGTAAGAGAAGCTGGGCAGAAAGATAAAAAGATTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506636.1 |
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| CDS-3UTR CCA 90 bp | AAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACCGCGCCTAGGTCCTaGGCTGCACAGGCGGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: KIPRLCVSSSYFLATIYSTAPRS*AAQAGR Trigger: TCGCCCCGCCTGTGCAGCCCAGGACCTAGGCGCGGT...GCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAAACCCAGTCAGAAGGCTaGCCGCGCCCCTCAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SYFLATIYSTEPSPAFPQTQSEG*PRPSKA Trigger: GGCTTTTGAGGGGCGCGGGCAGCCTTCTGACTGGGT...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | AAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCATCCCTGTAAAACTCTaGGCACTCTGTCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KIPRLCVSSSYFLATIYSIPVKL*ALCPGR Trigger: CCTGCCAGGACAGAGTGCTCAGAGTTTTACAGGGAT...GCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTCAGCCTTGTAGTATCTaGCTGGCACCGATAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IPRLCVSSSYFLATIYSTQPCSI*LAPISG Trigger: GCCACTTATCGGTGCCAGGCAGATACTACAAGGCTG...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATCTGAGCACTCTGTCCTaGCAGGCCAATACAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYLSTLS*QANTGV Trigger: CACACCTGTATTGGCCTGCCAGGACAGAGTGCTCAG...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCACGCAAGTTTTCCGTCTaGTGTCCCAAACAAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: VSSSYFLATIYSTEPSPARKFSV*CPKQKV Trigger: GACCTTTTGTTTGGGACATCAGACGGAAAACTTGCG...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATGGAGTGAAAGAGGTTTaGTGTGGTACTGGCGGACCT | + |
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Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYGVKEV*CGTGGP Trigger: AGGTCCGCCAGTACCACATCAAACCTCTTTCACTCC...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTCTTGAACACTGCTGCTaGTTCTCCTTTCTTCATGCC | + |
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Preference number: 4 (lower is better) Translates to: IPRLCVSSSYFLATIYSTLEHCC*FSFLHA Trigger: GGCATGAAGAAAGGAGAAGCAGCAGCAGTGTTCAAG...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCACCTACACAACCACCCTaGATAGATGTGACGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSSSYFLATIYSTEPSPAPTQPP*IDVTLS Trigger: TGAAAGCGTCACATCTATCCAGGGTGGTTGTGTAGG...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTAGATGTAACTTGCACTaGGAAAGAGGTCTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCVSSSYFLATIYSTEPSRCNLH*ERGLSQ Trigger: CTGGCTCAGACCTCTTTCTCAGTGCAAGTTACATCT...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAAGAACTTCAGCAAAACTaGACTGGCCTGTTAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SYFLATIYSTEPSPAFPQELQQN*TGLLGS Trigger: TGACCCTAACAGGCCAGTTCAGTTTTGCTGAAGTTC...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATGTCACACATTCTCCTaGTGGAGGTTTTTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VSSSYFLATIYSTEPSPACHTFS*WRFFWN Trigger: GTTCCAGAAAAACCTCCAGCAGGAGAATGTGTGACA...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGGACCTGACAGGTTTTaGGTTGAATTCTTGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IPRLCVSSSYFLATIYSTGPDRF*VEFLES Trigger: TGACTCCAAGAATTCAACCCAAAACCTGTCAGGTCC...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATCAGCAAAACTGAACTaGCCTGTTAGGGTCAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: VSSSYFLATIYSTEPSPASAKLN*PVRVSV Trigger: TACACTGACCCTAACAGGCCAGTTCAGTTTTGCTGA...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTTTAGCCAAAAGCAACTaGTACTCCAGCTTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LCVSSSYFLATIYSTEPSLAKSN*YSSFGW Trigger: CCACCCAAAGCTGGAGTACCAGTTGCTTTTGGCTAA...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
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| CDS-3UTR TCA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCAAGCTTCATAGTCTTCTaGGATGTTACTCCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVGKSKMASLFLHSSLEASFIVF*DVTPTC Trigger: GCAGGTGGGAGTAACATCTCAGAAGACTATGAAGCT...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | TTTCCACTAGCTGGCAACATACATAGTAACCAGGACACAAAGCAAGTACCAGTAAGGCCAATACAGGTGTaGTACGAGATAATCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FPLAGNIHSNQDTKQVPVRPIQV*YEIIFP Trigger: TGGAAAGATTATCTCGTATCACACCTGTATTGGCCT...TACTGGTACTTGCTTTGTGTCCTGGTTACTATGTATGTTGCCAGCTAGTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCAACCTGTAACCCAGCCTaGATATGTGGACACCACGAT | + |
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Preference number: 4 (lower is better) Translates to: EDTSVGKSKMASLFLHSSTCNPA*ICGHHD Trigger: ATCGTGGTGTCCACATATTCAGGCTGGGTTACAGGT...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAAAAAACCACCCAGGAGTaGACTTCAGCAAAACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SYFLATIYSTEPSPAFPQKTTQE*TSAKLN Trigger: GTTCAGTTTTGCTGAAGTTCACTCCTGGGTGGTTTT...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCACTTTCCTTATGAATaGGCTCTGTTGTCAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: SSSYFLATIYSTEPSPAFHFPYE*ALLSDL Trigger: CAGGTCTGACAACAGAGCCCATTCATAAGGAAAGTG...AAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | AACTGCAGCAGAGTCATAAAACACTACCAAGCAAAAGGAATATCAGTTGCAAATCCTGGCACCGATAAGTaGCAAGAAGGAAGTTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: NCSRVIKHYQAKGISVANPGTDK*QEGSCR Trigger: ACGACAACTTCCTTCTTGCCACTTATCGGTGCCAGG...ATTTGCAACTGATATTCCTTTTGCTTGGTAGTGTTTTATGACTCTGCTGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCAACTGAGAAAGAGGTCTaGGCCAGATATGTGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: EDTSVGKSKMASLFLHSSTEKEV*ARYVHS Trigger: GCTATGCACATATCTGGCTCAGACCTCTTTCTCAGT...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCAGGTCCACTTTCCTTATaGATGGGCTCTGTTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EDTSVGKSKMASLFLHSSGPLSL*MGSVVR Trigger: TCTGACAACAGAGCCCATTCATAAGGAAAGTGGACC...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCAATACTGGCCTTCAATTaGGCGAATCTTGAGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVGKSKMASLFLHSSLEAILAFN*ANLEFQ Trigger: CTGGAACTCAAGATTCGCTCAATTGAAGGCCAGTAT...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | AGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTTCCAGGAACTTCAACTaGATACATCACATCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: SSSYFLATIYSTEPSPAFSRNFN*IHHIRS Trigger: GGATCTGATGTGATGTATGCAGTTGAAGTTCCTGGA...AAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | TTTCCACTAGCTGGCAACATACATAGTAACCAGGACACAAAGCAAGTACCAGTAAGCATTTCCACAAACTaGAGCAGAGTCATAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: FPLAGNIHSNQDTKQVPVSISTN*SRVIKH Trigger: GTGTTTTATGACTCTGCTGCAGTTTGTGGAAATGCT...TACTGGTACTTGCTTTGTGTCCTGGTTACTATGTATGTTGCCAGCTAGTGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCATGTAGTGTGCCATACTaGCCTTCAATTGAGCGAATC | + |
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Preference number: 4 (lower is better) Translates to: SVGKSKMASLFLHSSLEACSVPY*PSIERI Trigger: GATTCGCTCAATTGAAGGCCAGTATGGCACACTACA...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAATGCTGGAGGTTTTTCTaGAACTTCAGGCAGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: SYFLATIYSTEPSPAFPQCWRFF*NFRQTK Trigger: TTTTGTCTGCCTGAAGTTCCAGAAAAACCTCCAGCA...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR CCA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCATTAGCCAAAAGCAACTaGTACTCCAGCTTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EDTSVGKSKMASLFLHSSLAKSN*YSSFGW Trigger: CCACCCAAAGCTGGAGTACCAGTTGCTTTTGGCTAA...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
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| CDS-3UTR CCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGTACTTGGGTTCTaGTCCCAGCTTTACAAAATA | + |
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Preference number: 4 (lower is better) Translates to: LCVSSSYFLATIYSTEPSPVLGF*SQLYKI Trigger: TATTTTGTAAAGCTGGGACCAGAACCCAAGTACTGG...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATGGCAGATCACATCATTaGTTTTATCCCCAGAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYGRSHH*FYPQKG Trigger: ACCTTTCTGGGGATAAAATCAATGATGTGATCTGCC...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | GATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTAAGGAAGTTGTCGTTTaGCTCAGAATCACAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DTSVGKSKMASLFLHSSLKEVVV*LRITAA Trigger: AGCAGCTGTGATTCTGAGTCAAACGACAACTTCCTT...AAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR TCA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAAAGTTCTTTGATGGAGTaGAAGAGGTTTGATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SYFLATIYSTEPSPAFPQSSLME*KRFDVV Trigger: TACCACATCAAACCTCTTTCACTCCATCAAAGAACT...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGTCTTGAACACTGCTaGTGCTTCTCCTTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYSLEHC*CFSFLH Trigger: ATGAAGAAAGGAGAAGCAGCAGCAGTGTTCAAGACT...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTCTGCTGATTTTGCTTTaGTTGATTGAGAAGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: IPRLCVSSSYFLATIYSTLLILL*LIEKTV Trigger: AACAGTCTTCTCAATCAAGCAAAGCAAAATCAGCAG...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATCATATGCTTGTAGTGTaGCATACTGGCCTTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYHMLVV*HTGLQL Trigger: CAATTGAAGGCCAGTATGGCACACTACAAGCATATG...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | TTTCCACTAGCTGGCAACATACATAGTAACCAGGACACAAAGCAAGTACCAGTAGAGTCTTTCAAGATGTaGAGGTTGCTTTTTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: FPLAGNIHSNQDTKQVPVESFKM*RLLFVF Trigger: GAATACAAAAAGCAACCTGCACATCTTGAAAGACTC...TACTGGTACTTGCTTTGTGTCCTGGTTACTATGTATGTTGCCAGCTAGTGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
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| CDS-3UTR GCA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCAGAGTCTTTCAAGATGTaGAGGTTGCTTTTTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSSYFLATIYSTEPSPAESFKM*RLLFVF Trigger: GAATACAAAAAGCAACCTGCACATCTTGAAAGACTC...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTAGCATTTCCACAAACTaGAGCAGAGTCATAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LCVSSSYFLATIYSTEPSSISTN*SRVIKH Trigger: GTGTTTTATGACTCTGCTGCAGTTTGTGGAAATGCT...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCATTCCCACTTGCGTACTaGTTTGGATGTAGTAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGKSKMASLFLHSSLEAFPLAY*FGCSNL Trigger: CAGATTACTACATCCAAACCAGTACGCAAGTGGGAA...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CCA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACACACATTCTCCTGCTaGAGGTTTTTCTGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDTSVGKSKMASLFLHSSHTFSC*RFFWNF Trigger: GAAGTTCCAGAAAAACCTCCAGCAGGAGAATGTGTG...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTTACTCCAGCTTTGGGTaGATTAGCTTTAAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCVSSSYFLATIYSTEPSYSSFG*ISFKVC Trigger: ACACACTTTAAAGCTAATCCACCCAAAGCTGGAGTA...ACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCGCTCTTCTTATTTCCTaGCTACAATTTATAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KIPRLCVSSSYFLATIYSALLIS*LQFIAL Trigger: CAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGC...GCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR TCA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATATAACTACCCCATCATaGTCTCCAATAACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKIPRLCVSSSYFLATIYITTPS*SPITTF Trigger: AAAGGTGGTTATTGGAGATCATGATGGGGTAGTTAT...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR GCA 90 bp | CGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCATGCAATACCTTATACTaGAAATGTTCCAACTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RLCVSSSYFLATIYSTEPCNTLY*KCSNSF Trigger: GAATGAGTTGGAACATTTGCAGTATAAGGTATTGCA...TGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCATACTCCAGCTTTGGGTaGATTAGCTTTAAAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVGKSKMASLFLHSSLEAYSSFG*ISFKVC Trigger: ACACACTTTAAAGCTAATCCACCCAAAGCTGGAGTA...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CCA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTAACAGACCACTTCTTTaGGACTTTACCTTATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPRLCVSSSYFLATIYSTNRPLL*DFTLFV Trigger: TACAAATAAGGTAAAGTCCCAAAGAAGTGGTCTGTT...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CCA 90 bp | GATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGCTCTTCTTATTTCCTaGCTACAATTTATAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DTSVGKSKMASLFLHSSLALLIS*LQFIAL Trigger: CAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGC...AAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CAA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAACTCCCAGTTCCAGCCTaGCAATCTTCGGCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SYFLATIYSTEPSPAFPQLPVPA*QSSARV Trigger: TACCCGGGCCGAAGATTGCAAGGCTGGAACTGGGAG...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS CCA 90 bp | GCATACATCACATCAGATCCCTGTAAAACTCTGAGCACTCTGTCCTaGCAGGCCAATACAGGTGTGATACGAGATAATCTTTCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AYITSDPCKTLSTLS*QANTGVIRDNLSTG Trigger: TCCAGTGGAAAGATTATCTCGTATCACACCTGTATTGGCCTGCCAGGACAGAGTGCTCAGAGTTTTACAGGGATCTGATGTGATGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS-3UTR CAA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTTGGAGTGAAAGAGGTTaGATGTGGTACTGGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: IPRLCVSSSYFLATIYSTWSERG*MWYWRT Trigger: GGTCCGCCAGTACCACATCAAACCTCTTTCACTCCA...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCAGGCCCGGGTAAAGTCTaGAACACTGCTGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGKSKMASLFLHSSLEAGPGKV*NTAAAS Trigger: AGAAGCAGCAGCAGTGTTCAAGACTTTACCCGGGCC...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | ATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTAGCAAGTACCAGTACTaGGGTTCTGGTCCCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IPRLCVSSSYFLATIYSTSKYQY*GSGPSF Trigger: AAAGCTGGGACCAGAACCCAAGTACTGGTACTTGCT...AGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS TCA 90 bp | TACTGGTTTGGATGTAGTAATCTGTATAAGCGCAAGTTTTCCGTCTaGTGTCCCAAACAAAAGGTCTTCTCCAGAGTCACCGCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YWFGCSNLYKRKFSV*CPKQKVFSRVTAIS Trigger: GGAAATGGCGGTGACTCTGGAGAAGACCTTTTGTTTGGGACATCAGACGGAAAACTTGCGCTTATACAGATTACTACATCCAAACCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS CCA 90 bp | AAAATACAAATAACAGCAACCTGTAAAACTCTGAGCACTCTGTCCTaGCAGGCCAATACAGGTGTGATACGAGATAATCTTTCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIQITATCKTLSTLS*QANTGVIRDNLSTG Trigger: TCCAGTGGAAAGATTATCTCGTATCACACCTGTATTGGCCTGCCAGGACAGAGTGCTCAGAGTTTTACAGGTTGCTGTTATTTGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505692.1 |
||
| CDS-3UTR CAA 90 bp | TCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCCACAAGTGGCAAGAAGGAAGTaGTCGTTTGACTCAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SYFLATIYSTEPSPAFPQVARRK*SFDSES Trigger: TGATTCTGAGTCAAACGACAACTTCCTTCTTGCCAC...TTGTGGAAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCACTAGCTGGCAACATACATAGTAACCAGGACACAAAGCAAGTACCAGTAGGGACTTTACCTTATTaGTATGTCATGCTGCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: FPLAGNIHSNQDTKQVPVGTLPY*YVMLHR Trigger: TCGATGCAGCATGACATACAAATAAGGTAAAGTCCC...TACTGGTACTTGCTTTGTGTCCTGGTTACTATGTATGTTGCCAGCTAGTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATTCACCGCCATTTCCATaGTGTAGTGCTAAGACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKIPRLCVSSSYFLATIYSPPFP*CSAKTV Trigger: TACTGTCTTAGCACTACACAATGGAAATGGCGGTGA...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTTCAATTGAGCGAATCTaGAGTTCCAGCCTTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSYFLATIYSTEPSPAFSIERI*SSSLVV Trigger: TACTACAAGGCTGGAACTCAAGATTCGCTCAATTGA...AAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | GTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTCAAGATGTGCAGGTaGCTTTTTGTATTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSYFLATIYSTEPSPAFKMCR*LFVFFL Trigger: CAGGAAGAATACAAAAAGCAACCTGCACATCTTGAA...TGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CAA 90 bp | ATTAAGATCCCCCGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGGCAGATCACATCATaGATTTTATCCCCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IKIPRLCVSSSYFLATIYRQITS*ILSPER Trigger: CCTTTCTGGGGATAAAATCAATGATGTGATCTGCCT...ATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCGGGGGATCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | CGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCATTTTGGGTTGAATTCTaGGAGTCACATATGCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLCVSSSYFLATIYSTEPFWVEF*ESHMLV Trigger: TACAAGCATATGTGACTCCAAGAATTCAACCCAAAA...TGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTGAAGCACTGACAGGTTTTGGGTaGAATTCTTGGAGTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: SVGKSKMASLFLHSSLEALTGFG*NSWSHI Trigger: TATGTGACTCCAAGAATTCAACCCAAAACCTGTCAG...TGCTTCAAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | CGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAAACAGACCACTTCTTaGGGACTTTACCTTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCVSSSYFLATIYSTEPKQTTS*GLYLIC Trigger: ACAAATAAGGTAAAGTCCCAAAGAAGTGGTCTGTTT...TGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | CGACTCTGTGTAAGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCACAAAAGGAATATCAGTaGCAAATCAATCCTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLCVSSSYFLATIYSTEPQKEYQ*QINPIS Trigger: GGAGATAGGATTGATTTGCAACTGATATTCCTTTTG...TGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCTTACACAGAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTCTTATTTCCTGGCTACAATTTATAGCACTGAGCCAAGTCCAGCATTTCTGATTTTGCTTTGCTaGATTGAGAAGACTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSYFLATIYSTEPSPAFLILLC*IEKTVD Trigger: ATCAACAGTCTTCTCAATCAAGCAAAGCAAAATCAG...AAATGCTGGACTTGGCTCAGTGCTATAAATTGTAGCCAGGAAATAAGAAGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS CCA 90 bp | TCTTTTAAAGCATCAATTAACTGCACTTTCTTAGCCAAAAGCAACTaGTACTCCAGCTTTGGGTGGATTAGCTTTAAAGTGTGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SFKASINCTFLAKSN*YSSFGWISFKVCLT Trigger: AGTCAAACACACTTTAAAGCTAATCCACCCAAAGCTGGAGTACCAGTTGCTTTTGGCTAAGAAAGTGCAGTTAATTGATGCTTTAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000264499.9 ENST00000506636.1 ENST00000507814.5 |
||
| CDS-3UTR CAA 90 bp | GATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTCACTTGCGTACTGGTTaGGATGTAGTAATCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: DTSVGKSKMASLFLHSSLHLRTG*DVVICI Trigger: TATACAGATTACTACATCCAAACCAGTACGCAAGTG...AAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS-3UTR CAA 90 bp | GATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCACTTTTCAAGATGTGCAGGTaGCTTTTTGTATTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DTSVGKSKMASLFLHSSLFKMCR*LFVFFL Trigger: CAGGAAGAATACAAAAAGCAACCTGCACATCTTGAA...AAGTGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000507814.5 |
||
| CDS-3UTR CAA 90 bp | GAAGATACTAGTGTAGGAAAATCTAAGATGGCATCACTATTTCTGCACTCTTCATCTCTTTTTCTCATTTaGAATTTCCCACTTGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EDTSVGKSKMASLFLHSSSLFLI*NFPLAY Trigger: GTACGCAAGTGGGAAATTCAAAATGAGAAAAAGAGA...TGAAGAGTGCAGAAATAGTGATGCCATCTTAGATTTTCCTACACTAGTATCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||
| CDS CAA 72 bp | GGTACTGGCGGACCTGACAGGTTTTGGGTTGAATTCTaGGAGTCACATATGCTTGTAGTGTGCCATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGGPDRFWVEF*ESHMLVVCHTG Trigger: GCCAGTATGGCACACTACAAGCATATGTGACTCCAAGAATTCAACCCAAAACCTGTCAGGTCCGCCAGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS CCA 72 bp | ACATCAGATCCCTGTAAAACTCTGAGCACTCTGTCCTaGCAGGCCAATACAGGTGTGATACGAGATAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSDPCKTLSTLS*QANTGVIRDNL Trigger: AAGATTATCTCGTATCACACCTGTATTGGCCTGCCAGGACAGAGTGCTCAGAGTTTTACAGGGATCTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS TCA 72 bp | GGATGTAGTAATCTGTATAAGCGCAAGTTTTCCGTCTaGTGTCCCAAACAAAAGGTCTTCTCCAGAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GCSNLYKRKFSV*CPKQKVFSRVT Trigger: GGTGACTCTGGAGAAGACCTTTTGTTTGGGACATCAGACGGAAAACTTGCGCTTATACAGATTACTACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS CCA 72 bp | ATTCTTGGAGTCACATATGCTTGTAGTGTGCCATACTaGCCTTCAATTGAGCGAATCTTGAGTTCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILGVTYACSVPY*PSIERILSSSL Trigger: AAGGCTGGAACTCAAGATTCGCTCAATTGAAGGCCAGTATGGCACACTACAAGCATATGTGACTCCAAGAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS CCA 72 bp | ATAACAGCAACCTGTAAAACTCTGAGCACTCTGTCCTaGCAGGCCAATACAGGTGTGATACGAGATAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ITATCKTLSTLS*QANTGVIRDNL Trigger: AAGATTATCTCGTATCACACCTGTATTGGCCTGCCAGGACAGAGTGCTCAGAGTTTTACAGGTTGCTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505692.1 |
||
| CDS CCA 72 bp | GCATCAATTAACTGCACTTTCTTAGCCAAAAGCAACTaGTACTCCAGCTTTGGGTGGATTAGCTTTAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASINCTFLAKSN*YSSFGWISFKV Trigger: CACTTTAAAGCTAATCCACCCAAAGCTGGAGTACCAGTTGCTTTTGGCTAAGAAAGTGCAGTTAATTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264499.9 ENST00000506636.1 ENST00000507814.5 |
||
| CDS TCA 72 bp | GAGATAATCTTTCCACTGGAAGGCAGATCACATCATTaGTTTTATCCCCAGAAAGGTAATAATGTTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EIIFPLEGRSHH*FYPQKGNNVGL Trigger: AAGACCAACATTATTACCTTTCTGGGGATAAAATCAATGATGTGATCTGCCTTCCAGTGGAAAGATTATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000264499.9 ENST00000505692.1 ENST00000506636.1 |
||
| CDS CAA 90 bp | AGCAACTGGTACTCCAGCTTTGGGTGGATTAGCTTTAAAGTGTGTTaGACTGATACTTCATTTATCTCGTATGATATGTTGAGGTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SNWYSSFGWISFKVC*TDTSFISYDMLRLI Trigger: AATTAACCTCAACATATCATACGAGATAAATGAAGTATCAGTCAAACACACTTTAAAGCTAATCCACCCAAAGCTGGAGTACCAGTTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264499.9 ENST00000506636.1 ENST00000507814.5 |
||
| CDS CAA 90 bp | AAGGCAGATCACATCATTGATTTTATCCCCAGAAAGGTAATAATGTaGGTCTTTGCAGTCACAATAATGGTTATAGATGTAACTTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: KADHIIDFIPRKVIM*VFAVTIMVIDVTCT Trigger: AGTGCAAGTTACATCTATAACCATTATTGTGACTGCAAAGACCAACATTATTACCTTTCTGGGGATAAAATCAATGATGTGATCTGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000264499.9 ENST00000505692.1 ENST00000506636.1 |
||
| CDS CCA 72 bp | TCTCTTTTTCTCATTTTGAATTTCCCACTTGCGTACTaGTTTGGATGTAGTAATCTGTATAAGCGCAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFLILNFPLAY*FGCSNLYKRKF Trigger: AAACTTGCGCTTATACAGATTACTACATCCAAACCAGTACGCAAGTGGGAAATTCAAAATGAGAAAAAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS CAA 72 bp | TTATACCAAAGGAAGGTACTGCTGATTTTGCTTTGCTaGATTGAGAAGACTGTTGATAATTCTCTCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LYQRKVLLILLC*IEKTVDNSLFP Trigger: AGGAAAGAGAGAATTATCAACAGTCTTCTCAATCAAGCAAAGCAAAATCAGCAGTACCTTCCTTTGGTATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264499.9 ENST00000506636.1 |
||
| CDS TCA 72 bp | CTTTACCTTATTTGTATGTCATGCTGCATCGAAGAATaGAATCAATGCATTTTGGTCATAACTGTCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LYLICMSCCIEE*NQCILVITVQN Trigger: ATTCTGGACAGTTATGACCAAAATGCATTGATTTCATTCTTCGATGCAGCATGACATACAAATAAGGTAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264499.9 |
||