RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BBS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000140463

Ensembl transcript IDs: ENST00000268057.9, ENST00000395205.6, ENST00000561914.5, ENST00000562084.5, ENST00000562219.1, ENST00000563600.5, ENST00000565160.5, ENST00000566197.1, ENST00000566400.5, ENST00000566829.1, ENST00000566938.5, ENST00000567279.5, ENST00000568535.1, ENST00000569001.1, ENST00000569151.1, ENST00000569338.5, ENST00000569440.5

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTCCCCCATCTTTGGCTGGAAGTTGATGGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCC +
Preference number: 1 (lower is better)
Translates to: SSPIFGWKLMAALRK*KADAYCCMVKWTRP
Trigger: GGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR GCA 90 bp GCCTGCTGCCAAGATGGCCTTGTAGTTGGTAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAATGCCTTCTGGTAAATGCCGAGCTG +
Preference number: 1 (lower is better)
Translates to: ACCQDGLVVGRVISQ*IAKMFKCLLVNAEL
Trigger: CAGCTCGGCATTTACCAGAAGGCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCCATCTTGGCAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTaGGCAAATGCAGCTGCAATACTCAGCAGGCTTGGCCTCAACTTC +
Preference number: 1 (lower is better)
Translates to: LSRTKYREGLVLDSL*ANAAAILSRLGLNF
Trigger: GAAGTTGAGGCCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR CCA 90 bp CTGTATTTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: LYFLVRTPLLSCRLQ*PCPSLPPASGSSPA
Trigger: TGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAAATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000567279.5
3UTR GCA 90 bp CAAATGGACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTTCAGGCAGCTGATGGCCGCCACATA +
Preference number: 1 (lower is better)
Translates to: QMDKAQIIQNLPIKG*QVVGSFQAADGRHI
Trigger: TATGTGGCGGCCATCAGCTGCCTGAAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTCCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 90 bp AAGGGTTACACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGA +
Preference number: 1 (lower is better)
Translates to: KGYTYPGGLLLRRLS*HFLYLPDWSEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTGTAACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR TCA 90 bp GGAGAGAAAAGTCCTTTTGAAAGCAGACAGCATCATGTACCTTGCTaGCTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTCT +
Preference number: 1 (lower is better)
Translates to: GEKSPFESRQHHVPC*LSYIHKASSLAASS
Trigger: AGAACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACATGATGCTGTCTGCTTTCAAAAGGACTTTTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR TCA 90 bp TGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTaGACTAAGGAAGGAGTCAGTCAGCTAGGAGAGAAAAGTCCTTTT +
Preference number: 1 (lower is better)
Translates to: CHHRATQQRSVSAVP*TKEGVSQLGEKSPF
Trigger: AAAAGGACTTTTCTCTCCTAGCTGACTGACTCCTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR CCA 90 bp GCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATC +
Preference number: 1 (lower is better)
Translates to: AKETHSNVIPEWRTF*NSTSHNSVFGEGNI
Trigger: GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR TCA 90 bp CATCTTTGGCTGGAAGTTGATGGCCGCACTGAGAAAATGAAAAGCTaGTGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATA +
Preference number: 1 (lower is better)
Translates to: HLWLEVDGRTEKMKS*CILLHGQMDKAQII
Trigger: TATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR TCA 90 bp AAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCACTCTaGGGACTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCT +
Preference number: 1 (lower is better)
Translates to: KRNKDLATCLRLSAL*GLRTAHVWKSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
3UTR CCA 90 bp ATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTaGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGT +
Preference number: 1 (lower is better)
Translates to: IFLLAKETHSNVIPE*RTFWNSTSHNSVFG
Trigger: ACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp CCAGCACCTGAGGGGAGCGTCCTGTATGCAGCTGCTGAAGACATTGCCTGTCCTTTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: PAPEGSVLYAAAEDIACPFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...AGGACAGGCAATGTCTTCAGCAGCTGCATACAGGACGCTCCCCTCAGGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp TGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAACTTCTGAGCCACTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 2 (lower is better)
Translates to: WSRPVPPQPGEQLPTSEPLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...TGGCTCAGAAGTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp AGAGATGGGGGCTTTGTGAACTGGGATGTTCCTCCAGCACCTGAGGGGAGCGTCGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 2 (lower is better)
Translates to: RDGGFVNWDVPPAPEGSVEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...GACGCTCCCCTCAGGTGCTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR TCA 90 bp TTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGAGCCATTACTGGTaGAAAGTCTCCCTTCTCCGT +
Preference number: 2 (lower is better)
Translates to: LVRATSKSPWVCIMLPAAKSHYW*KVSLLR
Trigger: ACGGAGAAGGGAGACTTTTCACCAGTAATGGCTCTT...GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
3UTR-3UTR CCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACGATCCAGACAAGCCCTaGGCTGCTGCTCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHDPDKP*AAAPHP
Trigger: AGGATGAGGAGCAGCAGCCCAGGGCTTGTCTGGATC...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp TGCCAAGAGCATGTAGAGCTCCCCCATCTTTGGCTGGAAGTTGATGGCCGCACTACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 2 (lower is better)
Translates to: CQEHVELPHLWLEVDGRTTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...AGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGAGCTCTACATGCTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp CTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAACTTCTATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LVWSRPVPPQPGEQLPTSMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...AGAAGTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CAA 90 bp CTGGTTGAAGTGGTCTGGTGCTTTGATTTGGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAAC +
Preference number: 2 (lower is better)
Translates to: LVEVVWCFDLGSLTG*VQTSASPTWRAAPN
Trigger: GTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAATCAAAGCACCAGACCACTTCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp GAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: EAAGNWQVCWLKWSGALIVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...AATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp ATCTTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCGGCCTCAAGCCTTGCTaGCAGTTCTTAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: IFNWFGPDQCLPNLESSSGLKPC*QFLKEL
Trigger: CAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCC...GGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR GCA 90 bp CCAGCACCTGAGGGGAGCGTCCTGTATGCAGCTGCTGAAGACATTGCCTGTCCTCTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: PAPEGSVLYAAAEDIACPLRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...AGGACAGGCAATGTCTTCAGCAGCTGCATACAGGACGCTCCCCTCAGGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CAA 90 bp CAGAGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTG +
Preference number: 2 (lower is better)
Translates to: QSGGLSGTAQATTLY*VRATSKSPWVCIML
Trigger: CAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR TCA 90 bp CCATCTCCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCACTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 2 (lower is better)
Translates to: PSPDIGPGRSSSRPGCTALLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...TGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR GCA 90 bp TTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: FNWFGPDQCLPNLESSSQVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGCGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATGATCCAGACAAGCCCTaGGCTGCTGCTCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANDPDKP*AAAPHP
Trigger: AGGATGAGGAGCAGCAGCCCAGGGCTTGTCTGGATC...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp AGAGATGGGGGCTTTGTGAACTGGGATGTTCCTCCAGCACCTGAGGGGAGCGTCCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 2 (lower is better)
Translates to: RDGGFVNWDVPPAPEGSVLRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...GACGCTCCCCTCAGGTGCTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CAA 90 bp TGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACC +
Preference number: 2 (lower is better)
Translates to: WKLAGLLVEVVWCFD*GSLTGLVQTSASPT
Trigger: GGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp CCTCCAGCACCTGAGGGGAGCGTCCTGTATGCAGCTGCTGAAGACATTGCCTGTCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 2 (lower is better)
Translates to: PPAPEGSVLYAAAEDIACHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...ACAGGCAATGTCTTCAGCAGCTGCATACAGGACGCTCCCCTCAGGTGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: ITELLSRGLSQLFLELRKHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CCA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATACGAGACAGAAAAAGATaGCACTACGGTAAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIRDRKR*HYGKSH
Trigger: ATGGCTCTTACCGTAGTGCCATCTTTTTCTGTCTCG...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562084.5
3UTR-3UTR CCA 90 bp AACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCTTAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 2 (lower is better)
Translates to: NIKVPVGLHHAACCQDGLRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...AAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp GGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 2 (lower is better)
Translates to: GTAQATTLYLVRATSKSPRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...CGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp TATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCATCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 2 (lower is better)
Translates to: YPGGLLLRRLSWHFLYLPSPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CAA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTaGGGCAAATGCAGCTGCAATACTCAGCAGGCTTGGCCTCAACTT +
Preference number: 2 (lower is better)
Translates to: PLKNKIQGGTCSGFP*GKCSCNTQQAWPQL
Trigger: AAGTTGAGGCCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR TCA 90 bp CAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATCTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 2 (lower is better)
Translates to: QWPCPSLPPASGSSPALYLLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...ATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000566938.5
3UTR-3UTR GCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp TATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCACTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 2 (lower is better)
Translates to: YPGGLLLRRLSWHFLYLPLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGACACACTGTATTCTGTaGTGGGTGCCACTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: ITELLSRGLSQLFLELRKTHCIL*WVPLCS
Trigger: AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CCA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCACTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 2 (lower is better)
Translates to: VITHTVFCGGCHSALPVSLRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp AGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCACTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 2 (lower is better)
Translates to: SGGLSGTAQATTLYLVRALRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...TGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: ALLAFSISSRLVRATAKSTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATGGGAGGGACTTGTTCTaGATTCCCTTTGGGCAAATG +
Preference number: 2 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANGRDLF*IPFGQM
Trigger: CATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCC...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp GTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 2 (lower is better)
Translates to: VDCFCVGSLGIFYIFQIGTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...ACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 2 (lower is better)
Translates to: FVFALGTNKPHNLRITSVGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR GCA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 2 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp AGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCGACCTTAGGCTCAACTaGTGGCTCCTCGTAATAACA +
Preference number: 2 (lower is better)
Translates to: RTFWNSTSHNSVFGEGNIDLRLN*WLLVIT
Trigger: TGTTATTACGAGGAGCCAGCAGTTGAGCCTAAGGTC...GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp TCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 2 (lower is better)
Translates to: SVFGEGNIKVPVGLHHAAHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...GGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp AAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATACAGAACACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KLMHTAAWSNGQGPNYTEHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...TTCTGTATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAATACTCAGCAGGCTTaGCCTCAACTTCCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCNTQQA*PQLPGL
Trigger: AAGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATT...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp CGCCCTGGTTGTACAGCAGCACAGCATAGTTCAGGTTTACTAAAGGGTTACACTTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 2 (lower is better)
Translates to: RPGCTAAQHSSGLLKGYTSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...AGTGTAACCCTTTAGTAAACCTGAACTATGCTGTGCTGCTGTACAACCAGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR TCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCGTCTCAGCTGTTCCTTaGACTAAGGAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCVSAVP*TKEGVS
Trigger: ACTGACTCCTTCCTTAGTTCAAGGAACAGCTGAGAC...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR GCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR GCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 2 (lower is better)
Translates to: MYLADSATYIRPQALLPVVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR GCA 90 bp AGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 2 (lower is better)
Translates to: RTFWNSTSHNSVFGEGNIVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGAGGCCTCAAGCCTTGCTaGCAGTTCTTAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRGLKPC*QFLKEL
Trigger: CAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCC...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR GCA 90 bp GTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 2 (lower is better)
Translates to: VDCFCVGSLGIFYIFQIGKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...ACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 2 (lower is better)
Translates to: ALLAFSISSRLVRATAKSLPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTATAGCATCTGGTCAGTaGTTATCACTGACTATCTTC +
Preference number: 2 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPIASGQ*LSLTIF
Trigger: GAAGATAGTCAGTGATAACCACTGACCAGATGCTAT...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp GTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 2 (lower is better)
Translates to: VSLQQVDLPQHYISQIVPRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...AGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
3UTR-3UTR TCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGTCTCAGCTGTTCCTTaGACTAAGGAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLVSAVP*TKEGVS
Trigger: ACTGACTCCTTCCTTAGTTCAAGGAACAGCTGAGAC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR TCA 90 bp TCAGGTTTACTAAAGGGTTACACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCATAAACCTCACAACCTaGGGATCACCTCAGTTAAAC +
Preference number: 2 (lower is better)
Translates to: SGLLKGYTYPGGLLLRRLINLTT*GSPQLN
Trigger: GTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTAT...GAGCCTACGCAGAAGCAGTCCACCTGGATAAGTGTAACCCTTTAGTAAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR TCA 90 bp CTTCTGAGCCATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 2 (lower is better)
Translates to: LLSHLHHLRVKFQRAIVLGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...AAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGATGGCTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGACTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 2 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRLRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CCA 90 bp GCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCTCGTTTACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: AQIIQNLPIKGCQVVGSFTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp GCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAACAGCTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 2 (lower is better)
Translates to: AKETHSNVIPEWRTFWNSSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...GCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR TCA 90 bp ATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGAGTAGGCTGCATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 2 (lower is better)
Translates to: ISTISESNSRELLSLSRLHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...CAGCCTACTCAAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR TCA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 2 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 2 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR GCA 90 bp CTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 2 (lower is better)
Translates to: LSGTAQATTLYLVRATSKMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGGGAGGGACTTGTTCTaGATTCCCTTTGGGCAAATG +
Preference number: 2 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHGRDLF*IPFGQM
Trigger: CATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp CTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 2 (lower is better)
Translates to: LSGTAQATTLYLVRATSKQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACCTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SCLLRFRALCNWSCALLNLGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR CAA 90 bp ATCATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTaGCTGCCAGTTCTTAAAGGAACTGTGTTCTCTTTTCACTTTTCC +
Preference number: 2 (lower is better)
Translates to: IMYLADSATYIRPQA*LPVLKGTVFSFHFS
Trigger: GGAAAAGTGAAAAGAGAACACAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR TCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTCATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 2 (lower is better)
Translates to: FVFALGTNKPHNLRITSVHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR TCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCACATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 2 (lower is better)
Translates to: SRTKYREGLVLDSLWANAHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR GCA 90 bp CTGATGGCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: LMAATYFFLPKKHIPMLFRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...GAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAATATTTGTGTTTGCCTTaGGGACTAATAAACCTCACA +
Preference number: 2 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQYLCLP*GLINLT
Trigger: TGTGAGGTTTATTAGTCCCCAAGGCAAACACAAATA...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR TCA 90 bp ATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTTCTTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 2 (lower is better)
Translates to: MADLPIFLVEFSCFIIYFFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...GAAGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562084.5
3UTR-3UTR TCA 90 bp CTGATGGCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 2 (lower is better)
Translates to: LMAATYFFLPKKHIPMLFRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...GAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCTATTTGTGTTTGCCTTaGGGACTAATAAACCTCACA +
Preference number: 2 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCYLCLP*GLINLT
Trigger: TGTGAGGTTTATTAGTCCCCAAGGCAAACACAAATA...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CCA 90 bp AAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATACAGAAATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: KLMHTAAWSNGQGPNYTEISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...TTCTGTATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
3UTR CAA 90 bp CAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAACAGCCTTGCAGGCTTCATAATCTTT +
Preference number: 2 (lower is better)
Translates to: QCLDIDSIFTQSLSL*KLFFDNSLAGFIIF
Trigger: AAAGATTATGAAGCCTGCAAGGCTGTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR-3UTR CCA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCAAAATAGGAAACTCTaGAGCTCAATGATGGGTAAG +
Preference number: 2 (lower is better)
Translates to: SGRVLGILGYFLLGEISMQNRKL*SSMMGK
Trigger: CTTACCCATCATTGAGCTCCAGAGTTTCCTATTTTG...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569440.5
3UTR-3UTR CAA 90 bp TGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAACTTCTGAGCCATTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: WSRPVPPQPGEQLPTSEPLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...TGGCTCAGAAGTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp ACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCC +
Preference number: 3 (lower is better)
Translates to: TLYLVRATSKSP*VCIMLPAAKMA
Trigger: GGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTCAATACTCAGCAGGCTaGGCCTCAACTTCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSQYSAG*ASTSRA
Trigger: AGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATTG...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR GCA 72 bp AACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTAGTTGGTAGGGTCATA +
Preference number: 3 (lower is better)
Translates to: NIKVPVGLHHAA*CQDGLVVGRVI
Trigger: TATGACCCTACCAACTACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR TCA 72 bp AGAAAAAGATGGCACTACGGTAAGAGCCATTACTGGTaGAAAGTCTCCCTTCTCCGTCCAGCGCACCCCAAG +
Preference number: 3 (lower is better)
Translates to: RKRWHYGKSHYW*KVSLLRPAHPK
Trigger: CTTGGGGTGCGCTGGACGGAGAAGGGAGACTTTTCACCAGTAATGGCTCTTACCGTAGTGCCATCTTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562084.5
3UTR GCA 72 bp CTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTGTCATGTCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: LLVITHTVFCGG*HSALPVSCHLS
Trigger: GGAAAGGTGACATGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp ACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTaGGCAAATGCAGCTGCAATACTCAGCAGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: TKYREGLVLDSL*ANAAAILSRLG
Trigger: GCCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR CCA 72 bp CTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCT +
Preference number: 3 (lower is better)
Translates to: LVRTPLLSCRLQ*PCPSLPPASGS
Trigger: AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp CGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGAGCATGTAGAGCTCCC +
Preference number: 3 (lower is better)
Translates to: RRLSWHFLYLPD*SEPLPRACRAP
Trigger: GGGAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp GGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 3 (lower is better)
Translates to: GTAQATTLYLVRATSKSPWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...CGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp AGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCATTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: SGGLSGTAQATTLYLVRALRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...TGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp TGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTTGGGAGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 3 (lower is better)
Translates to: CWKLAGLLVEVVWCFDLGATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...TCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGAGAGAAAAGTCCTTTaGAAAGCAGACAGCATCATG +
Preference number: 3 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSERKVL*KADSIM
Trigger: CATGATGCTGTCTGCTTTCAAAAGGACTTTTCTCTC...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CAA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATTGTTCTGGATTCCCTTaGGGCAAATGCAGCTGCAAT +
Preference number: 3 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANCSGFP*GKCSCN
Trigger: ATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACA...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CAA 90 bp AGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 3 (lower is better)
Translates to: SGGLSGTAQATTLYLVRAIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...TGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACAGCATCATGTACCTaGCTGACTCAGCTACATACA +
Preference number: 3 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANTASCT*LTQLHT
Trigger: TGTATGTAGCTGAGTCAGCAAGGTACATGATGCTGT...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR-3UTR CAA 90 bp CAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 3 (lower is better)
Translates to: QVDCFCVGSLGIFYIFQILRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...AATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 3 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR TCA 72 bp AAAGATCTGGCCACCTGCTTGAGGTTATCAGCACTCTaGGGACTAAGAACTGCACATGTCTGGAAGAGTTCT +
Preference number: 3 (lower is better)
Translates to: KDLATCLRLSAL*GLRTAHVWKSS
Trigger: AGAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
3UTR GCA 72 bp AAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTTCAGGCAGCTGATGGC +
Preference number: 3 (lower is better)
Translates to: KAQIIQNLPIKG*QVVGSFQAADG
Trigger: GCCATCAGCTGCCTGAAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR GCA 72 bp TGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTAACTGGTTTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: WKLAGLLVEVVW*FDLGSLTGLVQ
Trigger: CTGGACCAAACCAGTTAAAGATCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp ACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCAGATTGGTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: TYPGGLLLRRLS*HFLYLPDWSEP
Trigger: TGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp TGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCTTTAACTGGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: CWKLAGLLVEVV*CFDLGSLTGLV
Trigger: GACCAAACCAGTTAAAGATCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 3 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp GTCAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 3 (lower is better)
Translates to: VRSCLLRFRALCNWSCALGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000566938.5
3UTR TCA 72 bp ATCTTTGGCTGGAAGTTGATGGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGCTGCATGGTCAAATGG +
Preference number: 3 (lower is better)
Translates to: IFGWKLMAALRK*KADAYCCMVKW
Trigger: CCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCACAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 3 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATCAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 3 (lower is better)
Translates to: HNSVFGEGNIKVPVGLHHQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...ATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp TGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTTGGGACAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 3 (lower is better)
Translates to: CWKLAGLLVEVVWCFDLGQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...TCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATATTTGTGTTTGCCTaGGGGACTAATAAACCTCAC +
Preference number: 3 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQIFVFA*GTNKPH
Trigger: GTGAGGTTTATTAGTCCCCAAGGCAAACACAAATAT...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR-3UTR CAA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 3 (lower is better)
Translates to: ALLAFSISSRLVRATAKSATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 3 (lower is better)
Translates to: RSCLLRFRALCNWSCALLGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR-3UTR CAA 90 bp CAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 3 (lower is better)
Translates to: QIVPIKIQGIVQLVLCLVGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...AACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR TCA 72 bp TTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTaGGGATCACCTCAGTTAAACCAAGGCTTTGTCATC +
Preference number: 3 (lower is better)
Translates to: LCLPWGLINLTT*GSPQLNQGFVI
Trigger: GATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
3UTR CCA 72 bp ACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAACTCTGTATTTGGTGAG +
Preference number: 3 (lower is better)
Translates to: THSNVIPEWRTF*NSTSHNSVFGE
Trigger: CTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR CCA 72 bp CTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTaGAGGACTTTCTGGAACAGCACAAGCCACAACTCT +
Preference number: 3 (lower is better)
Translates to: LAKETHSNVIPE*RTFWNSTSHNS
Trigger: AGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp CATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 3 (lower is better)
Translates to: HVWKSSRDSWIFPSRRNIFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...GATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562084.5
3UTR-3UTR CAA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 3 (lower is better)
Translates to: FVFALGTNKPHNLRITSVQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR CAA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 3 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR GCA 72 bp CAAGATGGCCTTGTAGTTGGTAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAATGCCTTCTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: QDGLVVGRVISQ*IAKMFKCLLVN
Trigger: ATTTACCAGAAGGCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCATATTTGTGTTTGCCTaGGGGACTAATAAACCTCAC +
Preference number: 3 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGIFVFA*GTNKPH
Trigger: GTGAGGTTTATTAGTCCCCAAGGCAAACACAAATAT...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR CAA 90 bp TTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 3 (lower is better)
Translates to: LRFRALCNWSCALLNCFRAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...CCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
3UTR-3UTR CAA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 3 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
3UTR-3UTR CAA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 3 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
3UTR-3UTR CAA 90 bp TTATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 3 (lower is better)
Translates to: LWLISQSFWLSLAASLYTQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...AGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000567279.5
CDS-3UTR TCA 90 bp AACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCTTTCGCCCCGCCCACCCTaGGACGCTCGGCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: NIKVPVGLHHAACCQDGLSPRPP*DARHPA
Trigger: AGCTGGGTGCCGAGCGTCTCAGGGTGGGCGGGGCGA...AAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR GCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGAGCTCAGCCCACCGCTaGGCGGCCGGAAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKSSAHR*AAGSRR
Trigger: CCGCCGACTTCCGGCCGCGCAGCGGTGGGCTGAGCT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp GGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCGAGATGGGGGCTTTGTaGACTGGGATGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GNIKVPVGLHHAACCQDGEMGAL*TGMFLQ
Trigger: CTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTC...GCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTAGCTCAGCCCACCGCTaGGCGGCCGGAAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: VDCFCVGSLGIFYIFQIGSSAHR*AAGSRR
Trigger: CCGCCGACTTCCGGCCGCGCAGCGGTGGGCTGAGCT...ACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR GCA 90 bp TTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCCTAAGTATCCAGACTTaGCCCAGGCGACCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LVRATSKSPWVCIMLPAALSIQT*PRRPVP
Trigger: GGGAACTGGTCGCCTGGGGCAAGTCTGGATACTTAG...GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR TCA 90 bp CCATCTCCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCCTGTCCTAGAGCTTaGTTAGAGCCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSPDIGPGRSSSRPGCTAACPRA*LEPRGC
Trigger: GCAGCCTCTGGGCTCTAATCAAGCTCTAGGACAGGC...TGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCTTAGAGCCCAGAGGCTaGTGGAAACTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GNIKVPVGLHHAACCQDGLEPRG*WKLAGL
Trigger: CAAACCTGCCAGTTTCCAGCAGCCTCTGGGCTCTAA...GCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCCAGCTTGCCTTGCCCTaGGGCCGGGCAACTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QATTLYLVRATSKSPWVCQLALP*GRATKE
Trigger: CTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTG...GCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CCA 90 bp TTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LVRATSKSPWVCIMLPAAEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATACGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAAGNWQVCWLKWSGALIKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...AATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GGGATCTTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GIFNWFGPDQCLPNLESSTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...GCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LVRATSKSPWVCIMLPAAEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PDIGPGRSSSRPGCTAAQEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...CTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAACTTCTGTAGATACAGGAAATTaGGTTCTCGTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: LVWSRPVPPQPGEQLPTSVDTGN*VLVATL
Trigger: GAGAGTCGCGACGAGAACTCAATTTCCTGTATCTAC...AGAAGTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567279.5
CDS-3UTR TCA 90 bp GGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAATTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: GEGNIKVPVGLHHAACCQFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...TTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTGCCTGTCCTAGAGCTTaGTTAGAGCCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSAACPRA*LEPRGC
Trigger: GCAGCCTCTGGGCTCTAATCAAGCTCTAGGACAGGC...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCAAGAGCCATTACTGGTaGAAAGTCTCCCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ATSKSPWVCIMLPAAKMAKSHYW*KVSLLR
Trigger: ACGGAGAAGGGAGACTTTTCACCAGTAATGGCTCTT...GGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR GCA 90 bp GGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: GNIKVPVGLHHAACCQDGKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...GCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCCAGAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTCTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PRGCWKLAGLLVEVVWCFLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...AAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SMALSKSPSSKWIFPSIIKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GTAQATTLYLVRATSKSPFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...CGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LVRATSKSPWVCIMLPAARALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCTCCAGCACCTGAGGGGAGCGTCCTGTATGCAGCTGCTGAAGACATTGCCTGTAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: PPAPEGSVLYAAAEDIACRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...ACAGGCAATGTCTTCAGCAGCTGCATACAGGACGCTCCCCTCAGGTGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAGAGATGGGGGCTTTGTaGACTGGGATGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPEMGAL*TGMFLQ
Trigger: CTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTC...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGTTTCAGTTGGACTTaGTTCCACCGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVFGEGNIKVPVGLHHAACFSWT*FHRRLW
Trigger: CCAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACA...GGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTTGGGATTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CWKLAGLLVEVVWCFDLGFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...TCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSAVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: GTAQATTLYLVRATSKSPSPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...CGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGATCCAGACAAGCCCTaGGCTGCTGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTADPDKP*AAAPHP
Trigger: AGGATGAGGAGCAGCAGCCCAGGGCTTGTCTGGATC...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR CAA 72 bp GGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLSGTAQATTLY*VRATSKSPWVC
Trigger: GCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: PDIGPGRSSSRPGCTAAQGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...CTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGTTCCTCCAGCACCTaGGGGGAGCGTCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKCSSST*GERPVC
Trigger: GCATACAGGACGCTCCCCTCAGGTGCTGGAGGAACA...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCAGAGATGGGGGCTTTGTaGACTGGGATGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VITHTVFCGGCHSALPVSEMGAL*TGMFLQ
Trigger: CTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTC...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGTTTCAGTTGGACTTaGTTCCACCGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPCFSWT*FHRRLW
Trigger: CCAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACA...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSALHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGCTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TAQATTLYLVRATSKSPWLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...CCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTCGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp AACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCTTGCTGATGCATACTGCTaGATGGTCAAATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: NIKVPVGLHHAACCQDGLADAYC*MVKWTR
Trigger: CCTTGTCCATTTGACCATGCAGCAGTATGCATCAGC...AAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSQVDCF*VGSLGI
Trigger: AATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGTTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTTAGAGCCCAGAGGCTaGTGGAAACTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LVITHTVFCGGCHSALPVLEPRG*WKLAGL
Trigger: CAAACCTGCCAGTTTCCAGCAGCCTCTGGGCTCTAA...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSAGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AGAGATGGGGGCTTTGTGAACTGGGATGTTCCTCCAGCACCTGAGGGGAGCGTCAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: RDGGFVNWDVPPAPEGSVRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...GACGCTCCCCTCAGGTGCTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PDIGPGRSSSRPGCTAAQSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...CTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSATSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGCCTGTCCTAGAGCTTaGTTAGAGCCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YPGGLLLRRLSWHFLYLPACPRA*LEPRGC
Trigger: GCAGCCTCTGGGCTCTAATCAAGCTCTAGGACAGGC...TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGATGTTCCTCCAGCACCTaGGGGGAGCGTCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRCSSST*GERPVC
Trigger: GCATACAGGACGCTCCCCTCAGGTGCTGGAGGAACA...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTTGTTCCTCCAGCACCTaGGGGGAGCGTCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLCSSST*GERPVC
Trigger: GCATACAGGACGCTCCCCTCAGGTGCTGGAGGAACA...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTTGTTCCTCCAGCACCTaGGGGGAGCGTCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: FVFALGTNKPHNLRITSVCSSST*GERPVC
Trigger: GCATACAGGACGCTCCCCTCAGGTGCTGGAGGAACA...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp AGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCGAGATGGGGGCTTTGTaGACTGGGATGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTFWNSTSHNSVFGEGNIEMGAL*TGMFLQ
Trigger: CTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTC...GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QATTLYLVRATSKSPWVCRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...GCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTCCAGCACCTGAGGGGAGCGTCCTGTATGCAGCTGCTGAAGACATTGCCTGTAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PPAPEGSVLYAAAEDIACRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...ACAGGCAATGTCTTCAGCAGCTGCATACAGGACGCTCCCCTCAGGTGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GGCCTTGTAGTTGGTAGGGTCATAAGTCAGTGCATTGCCAAGATGTTCAAATGCCGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: GLVVGRVISQCIAKMFKCRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...GCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGAAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTATTGGTCAGAGCCACTaGCAAGAGCATGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSIGQSH*QEHVEL
Trigger: GAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAAT...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCACAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: SGGLSGTAQATTLYLVRAQVDCF*VGSLGI
Trigger: AATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG...TGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: VSLQQVDLPQHYISQIVPQVDCF*VGSLGI
Trigger: AATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG...AGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACCTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHLIQVD*FCVGSL
Trigger: AAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAG...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATTTTGGTCCAGACCAGTaGCTCCCCAACCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RFRALCNWSCALLNCFRYFGPDQ*LPNLES
Trigger: GCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAA...ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTTAGAGCCCAGAGGCTaGTGGAAACTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SLPPASGSSPALYKSDRALEPRG*WKLAGL
Trigger: CAAACCTGCCAGTTTCCAGCAGCCTCTGGGCTCTAA...GGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGGCCTCAAGCCTTGCTaGCAGTTCTTAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSGLKPC*QFLKEL
Trigger: CAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCC...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGGCCTCAAGCCTTGCTaGCAGTTCTTAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPGLKPC*QFLKEL
Trigger: CAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp GGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTCCCGCCAGCTTGCCTTaGCCTGCGGCCGGGCAACTA +
Preference number: 4 (lower is better)
Translates to: GRVLGILGYFLLGEISMLPASLP*PAAGQL
Trigger: TAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGG...AAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR GCA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACCTCTCCAGGAACCGCTaGATGGGACAAAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: SCLLRFRALCNWSCALLNLSRNR*MGQKPP
Trigger: GGGTGGCTTTTGTCCCATGCAGCGGTTCCTGGAGAG...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CCA 90 bp CAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: QATTLYLVRATSKSPWVCSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...GCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HNSVFGEGNIKVPVGLHHTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...ATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGTGCTGCATGGTCAAATaGACAAGGCCCAAATTATAC +
Preference number: 4 (lower is better)
Translates to: PDIGPGRSSSRPGCTAAQCCMVK*TRPKLY
Trigger: GTATAATTTGGGCCTTGTCCATTTGACCATGCAGCA...CTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCCAGAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTCTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRGCWKLAGLLVEVVWCFLYLPD*SEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAG...AAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCCAGAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: PRGCWKLAGLLVEVVWCFLVEVV*CFDLGS
Trigger: AGATCCCAAATCAAAGCACCAGACCACTTCAACCAG...AAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCCAAGAGCATGTAGAGCTCCCCCATCTTTGGCTGGAAGTTGATGGCCGCACTGTTTGCTGGTTGAAGTaGTCTGGTGCTTTGATTTGG +
Preference number: 4 (lower is better)
Translates to: CQEHVELPHLWLEVDGRTVCWLK*SGALIW
Trigger: CCAAATCAAAGCACCAGACCACTTCAACCAGCAAAC...AGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGAGCTCTACATGCTCTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACAACTGGCAGGTTTGCTaGTTGAAGTGGTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHNWQVC*LKWSGA
Trigger: AGCACCAGACCACTTCAACCAGCAAACCTGCCAGTT...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TTCCAGATTGGTCAGAGCCACTGCCAAGAGCATGTAGAGCTCCCCCATCTTTGGCTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 4 (lower is better)
Translates to: FQIGQSHCQEHVELPHLWLRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...CCAAAGATGGGGGAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAATCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCAGTGGTCTGGTGCTTTaGTTTGGGATCTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: SVFGEGNIKVPVGLHHAASGLVL*FGIFNW
Trigger: CCAGTTAAAGATCCCAAATCAAAGCACCAGACCACT...GGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTGCCTGTCCTAGAGCTTaGTTAGAGCCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FVFALGTNKPHNLRITSVACPRA*LEPRGC
Trigger: GCAGCCTCTGGGCTCTAATCAAGCTCTAGGACAGGC...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGTCTCAGCTGTTCCTTaGACTAAGGAAGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPVSAVP*TKEGVS
Trigger: ACTGACTCCTTCCTTAGTTCAAGGAACAGCTGAGAC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp ACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: TSMALSKSPSSKWIFPSIKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...AATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVITHTVFCGGCHSALPVRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: PDIGPGRSSSRPGCTAAQHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...CTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCACGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANARGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGCTGATGCATACTGCTaGATGGTCAAATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPADAYC*MVKWTR
Trigger: CCTTGTCCATTTGACCATGCAGCAGTATGCATCAGC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANQVDCF*VGSLGI
Trigger: AATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTTGGGACTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: CWKLAGLLVEVVWCFDLGLIQVD*FCVGSL
Trigger: AAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAG...TCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAGGTTTACTAAAGGGTTACACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SGLLKGYTYPGGLLLRRLGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...GAGCCTACGCAGAAGCAGTCCACCTGGATAAGTGTAACCCTTTAGTAAACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: QWPCPSLPPASGSSPALYEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...ATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATATTTGGGATCTTTAACTaGTTTGGTCCAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIFGIFN*FGPDQC
Trigger: GCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAA...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATGTTTGCTGGTTGAAGTaGTCTGGTGCTTTGATTTGG +
Preference number: 4 (lower is better)
Translates to: DFNGLVQVSLQQVDLPQHVCWLK*SGALIW
Trigger: CCAAATCAAAGCACCAGACCACTTCAACCAGCAAAC...ATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp ATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGAGTAGGCTGCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISTISESNSRELLSLSRLHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...CAGCCTACTCAAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VDCFCVGSLGIFYIFQIGHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...ACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAACACACTGTATTCTGTaGTGGGTGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPTHCIL*WVPLCS
Trigger: AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGT...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTATFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTAATACTCAGCAGGCTTaGCCTCAACTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTANTQQA*PQLPGL
Trigger: AAGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATT...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGATCCAGACAAGCCCTaGGCTGCTGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANADPDKP*AAAPHP
Trigger: AGGATGAGGAGCAGCAGCCCAGGGCTTGTCTGGATC...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR CAA 72 bp GCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTGGTCCAGACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AGLLVEVVWCFD*GSLTGLVQTSA
Trigger: GGCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAATCAAAGCACCAGACCACTTCAACCAGCAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGTAGATACAGGAAATTaGGTTCTCGTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: HCFLVDFNGLVQVSLQQVVDTGN*VLVATL
Trigger: GAGAGTCGCGACGAGAACTCAATTTCCTGTATCTAC...CACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCATTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: VITHTVFCGGCHSALPVSFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000567279.5
CDS-3UTR TCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp TCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGC +
Preference number: 4 (lower is better)
Translates to: SCRLQWPCPSLPPASGSSAALRK*KADAYC
Trigger: GCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGC...GGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATACTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: SMALSKSPSSKWIFPSIILLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
CDS-3UTR GCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSALRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPLRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSLQQVDLPQHYISQIVPRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...AGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SMALSKSPSSKWIFPSIIRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: TAQATTLYLVRATSKSPWAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...CCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCTTCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: NIKVPVGLHHAACCQDGLHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...AAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTACTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSLPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGCTGATGCATACTGCTaGATGGTCAAATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: HCFLVDFNGLVQVSLQQVADAYC*MVKWTR
Trigger: CCTTGTCCATTTGACCATGCAGCAGTATGCATCAGC...CACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATCTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANLIQVD*FCVGSL
Trigger: AAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAG...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCCAGAGGCTGCTGGAAACTGGCAGGTTTGCTGGTTGAAGTGGTCTGGTGCTTTGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: PRGCWKLAGLLVEVVWCFVEVVW*FDLGSL
Trigger: TAAAGATCCCAAATCAAAGCACCAGACCACTTCAAC...AAAGCACCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAGACCTTAGGCTCAACTaGTGGCTCCTCGTAATAACA +
Preference number: 4 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPDLRLN*WLLVIT
Trigger: TGTTATTACGAGGAGCCAGCAGTTGAGCCTAAGGTC...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCAGACCTTAGGCTCAACTaGTGGCTCCTCGTAATAACA +
Preference number: 4 (lower is better)
Translates to: VITHTVFCGGCHSALPVSDLRLN*WLLVIT
Trigger: TGTTATTACGAGGAGCCAGCAGTTGAGCCTAAGGTC...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCTSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp AGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: RTFWNSTSHNSVFGEGNIEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGATCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRSPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCATCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANASPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVFGEGNIKVPVGLHHAALRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...GGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTTTGGGATCTTTAACTaGTTTGGTCCAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHFGIFN*FGPDQC
Trigger: GCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAA...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGTTTGCTGGTTGAAGTaGTCTGGTGCTTTGATTTGG +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSVCWLK*SGALIW
Trigger: CCAAATCAAAGCACCAGACCACTTCAACCAGCAAAC...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTAACTGGCAGGTTTGCTaGTTGAAGTGGTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVNWQVC*LKWSGA
Trigger: AGCACCAGACCACTTCAACCAGCAAACCTGCCAGTT...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTCACTGTATTCTGTGGTaGGTGCCACTCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FVFALGTNKPHNLRITSVHCILW*VPLCSA
Trigger: GGCAGAGCAGAGTGGCACCCACCACAGAATACAGTG...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTACACACTGTATTCTGTaGTGGGTGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVTHCIL*WVPLCS
Trigger: AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGT...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTCTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTALRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CGCCCTGGTTGTACAGCAGCACAGCATAGTTCAGGTTTACTAAAGGGTTACACTACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: RPGCTAAQHSSGLLKGYTTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...AGTGTAACCCTTTAGTAAACCTGAACTATGCTGTGCTGCTGTACAACCAGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGAATACTCAGCAGGCTTaGCCTCAACTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKNTQQA*PQLPGL
Trigger: AAGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTGTTCTGGATTCCCTTTaGGCAAATGCAGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSAVLDSL*ANAAAI
Trigger: TATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAAC...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
3UTR CAA 72 bp AACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTaGGGCAAATGCAGCTGCAATACTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NKIQGGTCSGFP*GKCSCNTQQAW
Trigger: CCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp CAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGGTAGATACAGGAAATTaGGTTCTCGTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: QVSLQQVDLPQHYISQIVVDTGN*VLVATL
Trigger: GAGAGTCGCGACGAGAACTCAATTTCCTGTATCTAC...CACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: LSCRLQWPCPSLPPASGSFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTTTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: PSLPPASGSSPALYKSDRFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...ACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTARLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGAGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGC +
Preference number: 4 (lower is better)
Translates to: PSLPPASGSSPALYKSDRAALRK*KADAYC
Trigger: GCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGC...ACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TTATGTTTTCCCAAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCATGTTCCTCCAGCACCTaGGGGGAGCGTCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: LCFPKRNKDLATCLRLSACSSST*GERPVC
Trigger: GCATACAGGACGCTCCCCTCAGGTGCTGGAGGAACA...TGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTTGGGAAAACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACGAGATGGGGGCTTTGTaGACTGGGATGTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHEMGAL*TGMFLQ
Trigger: CTGGAGGAACATCCCAGTTCACAAAGCCCCCATCTC...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCATGTTTCAGTTGGACTTaGTTCCACCGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANACFSWT*FHRRLW
Trigger: CCAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACA...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTTGTTTCAGTTGGACTTaGTTCCACCGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLCFSWT*FHRRLW
Trigger: CCAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACA...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 4 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 4 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATCTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FNGLVQVSLQQVDLPQHYLRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...ATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LSCRLQWPCPSLPPASGSKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CGCCCTGGTTGTACAGCAGCACAGCATAGTTCAGGTTTACTAAAGGGTTACACTAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RPGCTAAQHSSGLLKGYTRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...AGTGTAACCCTTTAGTAAACCTGAACTATGCTGTGCTGCTGTACAACCAGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGCGTGGGTCTGCATCATaGTGCCTGCTGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: PPHISSCQRNTFQCYSRVRGSAS*CLLPRW
Trigger: CCATCTTGGCAGCAGGCAGCATGATGCAGACCCACG...CACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGACATAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLGILGYFLLGEISMLGHKSPWV*IMLPAA
Trigger: GGCAGCAGGCAGCATGATGCAGACCCACGGGGACTT...ATGTCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: HNSVFGEGNIKVPVGLHHLPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...ATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAATTGGTCAGAGCCACTaGCAAGAGCATGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: YPGGLLLRRLSWHFLYLPIGQSH*QEHVEL
Trigger: GAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAAT...TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGCTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSCLLRFRALCNWSCALLLIQVD*FCVGSL
Trigger: AAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAG...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTTTAGAGCCCAGAGGCTaGTGGAAACTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLLEPRG*WKLAGL
Trigger: CAAACCTGCCAGTTTCCAGCAGCCTCTGGGCTCTAA...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAGGTGCCACTCTGCTCTaGCTGTGTCATGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRGATLL*LCHVTF
Trigger: AAAGGTGACATGACACAGGCAGAGCAGAGTGGCACC...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SCRLQWPCPSLPPASGSSVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...GGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATTTCCCTTTGGGCAAATaGAGCTGCAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANFPLGK*SCNTQQ
Trigger: CTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAA...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTTTCCCTTTGGGCAAATaGAGCTGCAATACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVFPLGK*SCNTQQ
Trigger: CTGCTGAGTATTGCAGCTGCATTTGCCCAAAGGGAA...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATGGTATTCCAAATCATTaGTCACTCCAACTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QWPCPSLPPASGSSPALYGIPNH*SLQLPL
Trigger: AAGGGGGAGTTGGAGTGAGCAATGATTTGGAATACC...ATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567279.5
CDS-3UTR CCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000567279.5
CDS-3UTR CCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGCTGCATGGTCAAATaGACAAGGCCCAAATTATAC +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPCCMVK*TRPKLY
Trigger: GTATAATTTGGGCCTTGTCCATTTGACCATGCAGCA...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTTGCTGCATGGTCAAATaGACAAGGCCCAAATTATAC +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSACCMVK*TRPKLY
Trigger: GTATAATTTGGGCCTTGTCCATTTGACCATGCAGCA...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLAFSISSRLVRATAKSMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATACAGAATCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: KLMHTAAWSNGQGPNYTESPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...TTCTGTATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVITHTVFCGGCHSALPVLRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSLRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCAGTTTGCTGGTTGAAGTaGTCTGGTGCTTTGATTTGG +
Preference number: 4 (lower is better)
Translates to: VITHTVFCGGCHSALPVSVCWLK*SGALIW
Trigger: CCAAATCAAAGCACCAGACCACTTCAACCAGCAAAC...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGAGTAGGCTGAACTGGCAGGTTTGCTaGTTGAAGTGGTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ISTISESNSRELLSLSRLNWQVC*LKWSGA
Trigger: AGCACCAGACCACTTCAACCAGCAAACCTGCCAGTT...CAGCCTACTCAAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGAACTGGCAGGTTTGCTaGTTGAAGTGGTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGTAQATTLYLVRATSKNWQVC*LKWSGA
Trigger: AGCACCAGACCACTTCAACCAGCAAACCTGCCAGTT...CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTATTAAGGAGGCTGCTGGAAACTaGCAGGTTTGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LQQVDLPQHYISQIVPIKEAAGN*QVCWLK
Trigger: CTTCAACCAGCAAACCTGCCAGTTTCCAGCAGCCTC...CTTAATAGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAACTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 4 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQLRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCGGGAGGGACTTGTTCTaGATTCCCTTTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCGRDLF*IPFGQM
Trigger: CATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCC...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAGGGAGGGACTTGTTCTaGATTCCCTTTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKGRDLF*IPFGQM
Trigger: CATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCC...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp GCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTGCTTCCAGGAACCGCTGCATaGGACAAAAGCCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: AGFIIFPDIMKMNQPVLLPGTAA*DKSHPP
Trigger: TGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCTGG...AAGCAGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR TCA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp TTATGTTTTCCCAAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCAGCCTGTCCTAGAGCTTaGTTAGAGCCCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LCFPKRNKDLATCLRLSAACPRA*LEPRGC
Trigger: GCAGCCTCTGGGCTCTAATCAAGCTCTAGGACAGGC...TGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTTGGGAAAACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCCTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCLLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395205.6
CDS-3UTR TCA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTACTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVLLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
CDS-3UTR GCA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp AGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RFRALCNWSCALLNCFRYVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp GTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATATGTAGCAAACTCCGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQLVLCLVELLQVYVANSVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...GGAGTTTGCTACATATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTAAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: MYLADSATYIRPQALLPVAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCGCTGATGCATACTGCTaGATGGTCAAATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCADAYC*MVKWTR
Trigger: CCTTGTCCATTTGACCATGCAGCAGTATGCATCAGC...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp ATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGAGTAGGCTGGCTGATGCATACTGCTaGATGGTCAAATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ISTISESNSRELLSLSRLADAYC*MVKWTR
Trigger: CCTTGTCCATTTGACCATGCAGCAGTATGCATCAGC...CAGCCTACTCAAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATATTGGTCAGAGCCACTaGCAAGAGCATGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANIGQSH*QEHVEL
Trigger: GAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAAT...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPVEVVW*FDLGSL
Trigger: TAAAGATCCCAAATCAAAGCACCAGACCACTTCAAC...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACTTAGAGCCCAGAGGCTaGTGGAAACTGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHLEPRG*WKLAGL
Trigger: CAAACCTGCCAGTTTCCAGCAGCCTCTGGGCTCTAA...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp AATGAAAAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATGTATTCTGTGGTGGGTaGCACTCTGCTCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NEKLMHTAAWSNGQGPNYVFCGG*HSALPV
Trigger: CACAGGCAGAGCAGAGTGGCACCCACCACAGAATAC...ATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCATTGGGCAAATGCAGCTaGAATACTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANALGKCS*NTQQAW
Trigger: CCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAA...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATTTGGGCAAATGCAGCTaGAATACTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANLGKCS*NTQQAW
Trigger: CCAAGCCTGCTGAGTATTGCAGCTGCATTTGCCCAA...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SLPPASGSSPALYKSDRARTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...GGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SCRLQWPCPSLPPASGSSQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...GGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SCLLRFRALCNWSCALLNRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CCA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALLAFSISSRLVRATAKSSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTATTAAGGAGTGGAGGACTTTCTaGAACAGCACAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LQQVDLPQHYISQIVPIKEWRTF*NSTSHN
Trigger: GTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACTC...CTTAATAGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCTCGTTTCAGTCCCCCATCTTTGGCTaGAAGTTGATGGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: QIIQNLPIKGCQVVGSFQSPIFG*KLMAAL
Trigger: CAGTGCGGCCATCAACTTCCAGCCAAAGATGGGGGA...CTGAAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAACTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQLYLPD*SEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAG...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATTTTGGGATCTTTAACTaGTTTGGTCCAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANFGIFN*FGPDQC
Trigger: GCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAA...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKLVEVV*CFDLGS
Trigger: AGATCCCAAATCAAAGCACCAGACCACTTCAACCAG...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTATTAAGACACACTGTATTCTGTaGTGGGTGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LQQVDLPQHYISQIVPIKTHCIL*WVPLCS
Trigger: AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGT...CTTAATAGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGCTTAGGCTCAACTGCTaGCTCCTCGTAATAACACAC +
Preference number: 4 (lower is better)
Translates to: LRFRALCNWSCALLNCFRLRLNC*LLVITH
Trigger: GTGTGTTATTACGAGGAGCCAGCAGTTGAGCCTAAG...CCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCCTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLPPASGSSPALYKSDRALGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...GGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
CDS-3UTR CCA 90 bp CGCCCTGGTTGTACAGCAGCACAGCATAGTTCAGGTTTACTAAAGGGTTACACTCGAGACAGAAAAAGATaGCACTACGGTAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RPGCTAAQHSSGLLKGYTRDRKR*HYGKSH
Trigger: ATGGCTCTTACCGTAGTGCCATCTTTTTCTGTCTCG...AGTGTAACCCTTTAGTAAACCTGAACTATGCTGTGCTGCTGTACAACCAGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR TCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGTAGATACAGGAAATTaGGTTCTCGTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLVDTGN*VLVATL
Trigger: GAGAGTCGCGACGAGAACTCAATTTCCTGTATCTAC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268057.9
CDS-3UTR TCA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAGTAGATACAGGAAATTaGGTTCTCGTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRVDTGN*VLVATL
Trigger: GAGAGTCGCGACGAGAACTCAATTTCCTGTATCTAC...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp CAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: QIVPIKIQGIVQLVLCLVRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...AACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp CAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: QIVPIKIQGIVQLVLCLVGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...AACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGC +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANAAALRK*KADAYC
Trigger: GCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGC...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGC +
Preference number: 4 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLAALRK*KADAYC
Trigger: GCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTGCCGCACTGAGAAAATaGAAAGCTGATGCATACTGC +
Preference number: 4 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSAALRK*KADAYC
Trigger: GCAGTATGCATCAGCTTTTCATTTTCTCAGTGCGGC...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CTTCTGAGCCATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTAGTGGTCTGGTGCTTTaGTTTGGGATCTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: LLSHLHHLRVKFQRAIVLSGLVL*FGIFNW
Trigger: CCAGTTAAAGATCCCAAATCAAAGCACCAGACCACT...AAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGATGGCTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCCTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGLLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR GCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANAKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTATTAAGAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LQQVDLPQHYISQIVPIKKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...CTTAATAGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR GCA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: RFRALCNWSCALLNCFRYAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTTCTGAGCCATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLSHLHHLRVKFQRAIVLAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...AAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGATGGCTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: FNGLVQVSLQQVDLPQHYRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...ATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: QVDCFCVGSLGIFYIFQILPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...AATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AATGAAAAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: NEKLMHTAAWSNGQGPNYQVDCF*VGSLGI
Trigger: AATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTG...ATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGAGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGVEVVW*FDLGSL
Trigger: TAAAGATCCCAAATCAAAGCACCAGACCACTTCAAC...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTGACCTTAGGCTCAACTaGTGGCTCCTCGTAATAACA +
Preference number: 4 (lower is better)
Translates to: FVFALGTNKPHNLRITSVDLRLN*WLLVIT
Trigger: TGTTATTACGAGGAGCCAGCAGTTGAGCCTAAGGTC...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTGCATCATATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: HNSVFGEGNIKVPVGLHHISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...ATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SMALSKSPSSKWIFPSIIISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp ATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: IKIQGIVQLVLCLVELLQRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCATCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANASPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp ATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: IKIQGIVQLVLCLVELLQSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRFRALCNWSCALLNCFRSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...CCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SCLLRFRALCNWSCALLNSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSCLLRFRALCNWSCALLSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAAACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLETSKSP*VCIMLP
Trigger: AGGCAGCATGATGCAGACCCACGGGGACTTTGATGT...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGTGCTGCATGGTCAAATaGACAAGGCCCAAATTATAC +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKCCMVK*TRPKLY
Trigger: GTATAATTTGGGCCTTGTCCATTTGACCATGCAGCA...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTGAGTAGGCTGCTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISTISESNSRELLSLSRLLYLPD*SEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAG...CAGCCTACTCAAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTTATTTGTGTTTGCCTTaGGGACTAATAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: CWLLVITHTVFCGGCHSAYLCLP*GLINLT
Trigger: TGTGAGGTTTATTAGTCCCCAAGGCAAACACAAATA...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTATTTGTGTTTGCCTTaGGGACTAATAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHYLCLP*GLINLT
Trigger: TGTGAGGTTTATTAGTCCCCAAGGCAAACACAAATA...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTATAGCATCTGGTCAGTaGTTATCACTGACTATCTTC +
Preference number: 4 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTAIASGQ*LSLTIF
Trigger: GAAGATAGTCAGTGATAACCACTGACCAGATGCTAT...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANAGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGAAGTGGTCTGGTGCTTTaGTTTGGGATCTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRSGLVL*FGIFNW
Trigger: CCAGTTAAAGATCCCAAATCAAAGCACCAGACCACT...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp ATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTTCTGTTTCAGTTGGACTTaGTTCCACCGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MADLPIFLVEFSCFIIYFCFSWT*FHRRLW
Trigger: CCAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACA...GAAGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACATAAACCTCACAACCTaGGGATCACCTCAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SCLLRFRALCNWSCALLNINLTT*GSPQLN
Trigger: GTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTAT...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR TCA 90 bp TGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCCTCCTAGGTTATGGCTaGTCTCCTAGGCCAATCTTT +
Preference number: 4 (lower is better)
Translates to: CLDIDSIFTQSLSLLKLFLLGYG*SPRPIF
Trigger: AAAGATTGGCCTAGGAGATCAGCCATAACCTAGGAG...GAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
CDS-3UTR GCA 90 bp AGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RTAHVWKSSRDSWIFPSRKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...CCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCCAAGATGTTCAAATaGCTTCTGGTAAATGCCGAG +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANAKMFK*LLVNAE
Trigger: CTCGGCATTTACCAGAAGGCATTTGAACATCTTGGC...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ITELLSRGLSQLFLELRKRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp GTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATCTGCATCATGCTGCCTaGTGCCAAGATGGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: VWKSSRDSWIFPSRRNINLHHAA*CQDGLV
Trigger: TACAAGGCCATCTTGGCAGCAGGCAGCATGATGCAG...ATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLLPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp CCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGATTGGTCAGAGCCACTaGCAAGAGCATGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: PPHISSCQRNTFQCYSRVIGQSH*QEHVEL
Trigger: GAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAAT...CACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANAVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp GCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAACAGCGTTTCCGACCTCAAATaGCAATACCAGGTAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AKETHSNVIPEWRTFWNSVSDLK*QYQVGR
Trigger: TCTACCTACCTGGTATTGGCATTTGAGGTCGGAAAC...GCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALLAFSISSRLVRATAKSISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGACTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRLYLPD*SEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAG...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLLVEVV*CFDLGS
Trigger: AGATCCCAAATCAAAGCACCAGACCACTTCAACCAG...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CCA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSLVEVV*CFDLGS
Trigger: AGATCCCAAATCAAAGCACCAGACCACTTCAACCAG...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAAACACACTGTATTCTGTaGTGGGTGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLETHCIL*WVPLCS
Trigger: AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGT...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATCTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RFRALCNWSCALLNCFRYLGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR CAA 72 bp CGTTTCAGGCAGCTGATGGCCGCCACATATTTCTTCTaGCCAAAGAAACACATTCCAATGTTATTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RFRQLMAATYFF*PKKHIPMLFQS
Trigger: ACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGCCATCAGCTGCCTGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp CATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCTTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: HVWKSSRDSWIFPSRRNIFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...GATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp CAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: QCLDIDSIFTQSLSLLKLGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...CAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGTCTCAGCTGTTCCTTaGACTAAGGAAGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHVSAVP*TKEGVS
Trigger: ACTGACTCCTTCCTTAGTTCAAGGAACAGCTGAGAC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR TCA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAATAAACCTCACAACCTaGGGATCACCTCAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SRTKYREGLVLDSLWANAINLTT*GSPQLN
Trigger: GTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTAT...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR TCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTAACTCTGGAGCTCAATaGTGGGTAAGATCTTCAACT +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLNSGAQ*WVRSST
Trigger: AGTTGAAGATCTTACCCATCATTGAGCTCCAGAGTT...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569440.5
CDS-3UTR GCA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAAAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLERFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CTTCTGAGCCATCTCCACCATCTCAGAGTCAAATTCCAGAGAGCTATTGTCCTTAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLSHLHHLRVKFQRAIVLRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...AAGGACAATAGCTCTCTGGAATTTGACTCTGAGATGGTGGAGATGGCTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACCTTCCAATCAAAGGGTaGCAAGTAGTTGGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHLPIKG*QVVGSF
Trigger: AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAG...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGATTGGTCAGAGCCACTaGCAAGAGCATGTAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGRVLGILGYFLLGEISMIGQSH*QEHVEL
Trigger: GAGCTCTACATGCTCTTGGCAGTGGCTCTGACCAAT...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp CCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTCTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PCRLHNLSGYNEDESTSSLIQVD*FCVGSL
Trigger: AAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAG...AGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR GCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKVEVVW*FDLGSL
Trigger: TAAAGATCCCAAATCAAAGCACCAGACCACTTCAAC...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR GCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAAGACCTTAGGCTCAACTaGTGGCTCCTCGTAATAACA +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLEDLRLN*WLLVIT
Trigger: TGTTATTACGAGGAGCCAGCAGTTGAGCCTAAGGTC...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGACATGGCCTCAAGCCTTGCTaGCAGTTCTTAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: VLGILGYFLLGEISMLGHGLKPC*QFLKEL
Trigger: CAGTTCCTTTAAGAACTGGCAGCAAGGCTTGAGGCC...ATGTCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR CCA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: AATYFFLPKKHIPMLFQSRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...ACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: LRTAHVWKSSRDSWIFPSSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...AGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTTGCTGCATGGTCAAATaGACAAGGCCCAAATTATAC +
Preference number: 4 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSCCMVK*TRPKLY
Trigger: GTATAATTTGGGCCTTGTCCATTTGACCATGCAGCA...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCTCGTTTTTTGGGATCTTTAACTaGTTTGGTCCAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: AQIIQNLPIKGCQVVGSFFGIFN*FGPDQC
Trigger: GCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAA...AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp ATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTTCAACTGGCAGGTTTGCTaGTTGAAGTGGTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MADLPIFLVEFSCFIIYFNWQVC*LKWSGA
Trigger: AGCACCAGACCACTTCAACCAGCAAACCTGCCAGTT...GAAGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGACTTTTCCTGGCTTATaGGGCAGTAGAGGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: SGRVLGILGYFLLGEISMTFPGL*GSRGFP
Trigger: CGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGT...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGTATTTGTGTTTGCCTTaGGGACTAATAAACCTCACA +
Preference number: 4 (lower is better)
Translates to: QVSLQQVDLPQHYISQIVYLCLP*GLINLT
Trigger: TGTGAGGTTTATTAGTCCCCAAGGCAAACACAAATA...CACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR CCA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGTATTGATAGCATCTaGTCAGTGGTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKCIDSI*SVVITD
Trigger: GTCAGTGATAACCACTGACCAGATGCTATCAATACA...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGACTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRLGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395205.6
ENST00000566400.5
3UTR CAA 72 bp GACATAGATAGCATATTCACACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAACAGCCTTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: DIDSIFTQSLSL*KLFFDNSLAGF
Trigger: GAAGCCTGCAAGGCTGTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
CDS-3UTR TCA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTTTCTGCCGGGGTTTTTaGGACTCAGTAGATACAGGA +
Preference number: 4 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFFCRGF*DSVDTG
Trigger: TCCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAA...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp CATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: HVWKSSRDSWIFPSRRNIRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...GATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp CTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: LRTAHVWKSSRDSWIFPSGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...AGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGAAAGATCTGGCCACCTaGTTGAGGTTATCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SGRVLGILGYFLLGEISMKDLAT*LRLSAL
Trigger: GAGTGCTGATAACCTCAAGCAGGTGGCCAGATCTTT...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGTGCAACTGGTCTTGTaGCTTGTTGAACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGVQLVL*LVELLQ
Trigger: CTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCAC...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp GTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGACATAGATTCAGGGCATTGTaGAACTGGTCTTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLGILGYFLLGEISMLGHRFRAL*NWSCAL
Trigger: CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT...ATGTCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR GCA 90 bp GCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAACAGCAGGGTCATAAGTCAGTaGATTGCCAAGATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: AKETHSNVIPEWRTFWNSRVISQ*IAKMFK
Trigger: TTTGAACATCTTGGCAATGCACTGACTTATGACCCT...GCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GGACTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTAGAACTGCACATGTCTaGAAGAGTTCTAGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GLRTAHVWKSSRDSWIFPRTAHV*KSSRDS
Trigger: AGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT...AGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CCA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRTKYREGLVLDSLWANISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268057.9
CDS-3UTR CCA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGATCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAATGCATACTGCTGCATaGTCAAATGGACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGMHTAA*SNGQGP
Trigger: TGGGCCTTGTCCATTTGACCATGCAGCAGTATGCAT...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCTCGTTTCAGCTATATCTTCCAGATTaGTCAGAGCCACTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: QIIQNLPIKGCQVVGSFQLYLPD*SEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAG...CTGAAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: CLDIDSIFTQSLSLLKLFLRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...GAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp CTGATGGCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCTGGTTGAAGTGGTCTaGTGCTTTGATTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LMAATYFFLPKKHIPMLFLVEVV*CFDLGS
Trigger: AGATCCCAAATCAAAGCACCAGACCACTTCAACCAG...GAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGATGTATTGATAGCATCTaGTCAGTGGTTATCACTGAC +
Preference number: 4 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRCIDSI*SVVITD
Trigger: GTCAGTGATAACCACTGACCAGATGCTATCAATACA...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp CAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGCTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QCLDIDSIFTQSLSLLKLLGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...CAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
CDS-3UTR TCA 90 bp GGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: GRVLGILGYFLLGEISMLRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...AAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp AACAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: NSLAGFIIFPDIMKMNQPRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...TGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000569440.5
CDS-3UTR TCA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTGGTCTTGTGCCTTGTTaGACTGCTTCAGGTATATGT +
Preference number: 4 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFGLVPC*TASGIC
Trigger: ACATATACCTGAAGCAGTTCAACAAGGCACAAGACC...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR TCA 90 bp TTATGTTTTCCCAAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCAAGTGGTCTGGTGCTTTaGTTTGGGATCTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: LCFPKRNKDLATCLRLSASGLVL*FGIFNW
Trigger: CCAGTTAAAGATCCCAAATCAAAGCACCAGACCACT...TGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTTGGGAAAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR TCA 90 bp GCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTCATCATGTACCTTGCTaGCTCAGCTACATACATAAG +
Preference number: 4 (lower is better)
Translates to: AATYFFLPKKHIPMLFQSHHVPC*LSYIHK
Trigger: CTTATGTATGTAGCTGAGTCAGCAAGGTACATGATG...ACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR GCA 90 bp GGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTCTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRVLGILGYFLLGEISMLLRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...AAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR GCA 90 bp CTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: LRTAHVWKSSRDSWIFPSMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...AGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAAATGCCTTCTGGTAAATaGCGAGCTGTAAGTAGAGTA +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLEMPSGK*RAVSRV
Trigger: TACTCTACTTACAGCTCGGCATTTACCAGAAGGCAT...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TTATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LWLISQSFWLSLAASLYTRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...AGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AAATATCAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAGGGCATTGTGCAACTaGTCTTGTGCCTTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KYQCLDIDSIFTQSLSLLRALCN*SCALLN
Trigger: GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCT...CAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CCA 90 bp TTATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTTCTCCCTCCAGCAAGTaGATCTTCCCCAGCATTATA +
Preference number: 4 (lower is better)
Translates to: LWLISQSFWLSLAASLYTSPSSK*IFPSII
Trigger: TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGA...AGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CCA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGATCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGSCRLQ*PCPSLP
Trigger: AGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTGCTTTTGGGATCTTTAACTaGTTTGGTCCAGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CRLHNLSGYNEDESTSSAFGIFN*FGPDQC
Trigger: GCACTGGTCTGGACCAAACCAGTTAAAGATCCCAAA...AGCAGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CCA 90 bp TTATGTTTTCCCAAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCAGTTTGCTGGTTGAAGTaGTCTGGTGCTTTGATTTGG +
Preference number: 4 (lower is better)
Translates to: LCFPKRNKDLATCLRLSAVCWLK*SGALIW
Trigger: CCAAATCAAAGCACCAGACCACTTCAACCAGCAAAC...TGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTTGGGAAAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACATAGCATCTGGTCAGTaGTTATCACTGACTATCTTC +
Preference number: 4 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHIASGQ*LSLTIF
Trigger: GAAGATAGTCAGTGATAACCACTGACCAGATGCTAT...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CCA 90 bp GCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTGCTTCGAGACAGAAAAAGATaGCACTACGGTAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: AGFIIFPDIMKMNQPVLLRDRKR*HYGKSH
Trigger: ATGGCTCTTACCGTAGTGCCATCTTTTTCTGTCTCG...AAGCAGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000563600.5
CDS-3UTR TCA 90 bp TTTGATAACAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATAAGAGCCATTACTGGTaGAAAGTCTCCCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FDNSLAGFIIFPDIMKMNKSHYW*KVSLLR
Trigger: ACGGAGAAGGGAGACTTTTCACCAGTAATGGCTCTT...ATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTGTTATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000563600.5
CDS-3UTR GCA 90 bp TCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAACATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: SCQRNTFQCYSRVEDFLEHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...TTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR GCA 90 bp AATGAAAAGCTGATGCATACTGCTGCATGGTCAAATGGACAAGGCCCAAATTATCATAAGTCAGTGCATTaGCAAGATGTTCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: NEKLMHTAAWSNGQGPNYHKSVH*QDVQMP
Trigger: AGGCATTTGAACATCTTGGCAATGCACTGACTTATG...ATAATTTGGGCCTTGTCCATTTGACCATGCAGCAGTATGCATCAGCTTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTGCTCAAACTCCTAGGTTATaGCTGATCTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: CRLHNLSGYNEDESTSSAQTPRL*LISQSF
Trigger: GAAAGATTGGGAGATCAGCCATAACCTAGGAGTTTG...AGCAGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000563600.5
CDS-3UTR CCA 90 bp GTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VWKSSRDSWIFPSRRNINLRRLS*HFLYLP
Trigger: TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAG...ATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTAGGCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SGRVLGILGYFLLGEISMLGQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGCCTAG...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
3UTR CAA 72 bp ACTCCTAGGTTATGGCTGATCTCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTATATACTTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TPRLWLISQSFW*SLAASLYTSMA
Trigger: TGCCATTGAAGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAACCTAGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000567279.5
CDS-3UTR TCA 90 bp TTTGATAACAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATAGGTTATCAGCACTCTaGGGACTAAGAACTGCACAT +
Preference number: 4 (lower is better)
Translates to: FDNSLAGFIIFPDIMKMNRLSAL*GLRTAH
Trigger: ATGTGCAGTTCTTAGTCCTCAGAGTGCTGATAACCT...ATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTGTTATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000569440.5
CDS-3UTR GCA 90 bp TTTGATAACAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCTGAGGACTAAGAACTaGACATGTCTGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FDNSLAGFIIFPDIMKMNLRTKN*TCLEEF
Trigger: GAACTCTTCCAGACATGTGCAGTTCTTAGTCCTCAG...ATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTGTTATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000569440.5
CDS-3UTR GCA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTGTTGAAGTGGTCTGGTaGTTTGATTTGGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFVEVVW*FDLGSL
Trigger: TAAAGATCCCAAATCAAAGCACCAGACCACTTCAAC...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CCA 90 bp AACAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAATCTCCCAATCTTTCTaGTTGAGTTTAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSLAGFIIFPDIMKMNQPISQSF*LSLAAS
Trigger: TGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGAT...TGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000563600.5
CDS-3UTR CCA 90 bp TTATGTTTTCCCAAAAGAAATAAAGATCTGGCCACCTGCTTGAGGTTATCAGCACAAAATAGGAAACTCTaGAGCTCAATGATGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LCFPKRNKDLATCLRLSAQNRKL*SSMMGK
Trigger: CTTACCCATCATTGAGCTCCAGAGTTTCCTATTTTG...TGCTGATAACCTCAAGCAGGTGGCCAGATCTTTATTTCTTTTGGGAAAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569440.5
CDS CCA 90 bp GAGACGCTCGGCACCCAGCTCCGCCTCTCTCCAGGAACCGCTGCATaGGACAAAAGCCACCCGCCAGCTTGCCTTGCCCTGCGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ETLGTQLRLSPGTAA*DKSHPPACLALRPG
Trigger: GCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCTGGAGAGAGGCGGAGCTGGGTGCCGAGCGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS GCA 90 bp GAACCGCTGCATGGGACAAAAGCCACCCGCCAGCTTGCCTTGCCCTaGGGCCGGGCAACTAAAGAGAATCTCGGCGCTCACCGTCGCGAC +
Preference number: 5 (lower is better)
Translates to: EPLHGTKATRQLALP*GRATKENLGAHRRD
Trigger: GTCGCGACGGTGAGCGCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS GCA 90 bp TCCAGGAACCGCTGCATGGGACAAAAGCCACCCGCCAGCTTGCCTTaGCCTGCGGCCGGGCAACTAAAGAGAATCTCGGCGCTCACCGTC +
Preference number: 5 (lower is better)
Translates to: SRNRCMGQKPPASLP*PAAGQLKRISALTV
Trigger: GACGGTGAGCGCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CAA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCAAGCCACCCGCCAGCTaGCCTTGCCCTGCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: ALLAFSISSRLVRATAKSKPPAS*PCPAAG
Trigger: CCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTT...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CAA 90 bp CTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTACCCGCCAGCTTGCCTaGCCCTGCGGCCGGGCAACT +
Preference number: 5 (lower is better)
Translates to: LSCRLQWPCPSLPPASGSTRQLA*PCGRAT
Trigger: AGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGT...AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS GCA 90 bp GACTACAGTCCTAGAACAGGACCTGTGCTGCTAAGTATCCAGACTTaGCCCAGGCGACCAGTTCCCGGGACAGTAAAAAGGGGACCGTGT +
Preference number: 5 (lower is better)
Translates to: DYSPRTGPVLLSIQT*PRRPVPGTVKRGPC
Trigger: ACACGGTCCCCTTTTTACTGTCCCGGGAACTGGTCGCCTGGGGCAAGTCTGGATACTTAGCAGCACAGGTCCTGTTCTAGGACTGTAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS-3UTR CAA 90 bp GGCAACATCAAAGTCCCCGTGGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCCAGCTGCTGAAGACATaGCCTGTCCTAGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GNIKVPVGLHHAACCQDGQLLKT*PVLELD
Trigger: ATCAAGCTCTAGGACAGGCAATGTCTTCAGCAGCTG...GCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS CCA 90 bp CTGCCTGCTGCCAAGATGGCTCCACTGCTTTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPAAKMAPLLSCRLQ*PCPSLPPASGSSPA
Trigger: TGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGCCATCTTGGCAGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 90 bp CAAGCCACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCTCCACTGCTT +
Preference number: 5 (lower is better)
Translates to: QATTLYLVRATSKSP*VCIMLPAAKMAPLL
Trigger: AAGCAGTGGAGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 90 bp TGGGCTGACACAGGCAGCACCAATGCTATGTATGGCACCACCTCATaGCTTTGGAGAGTCCAACCCCCGCCAGTACCATTCTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: WADTGSTNAMYGTTS*LWRVQPPPVPFSTK
Trigger: CTTTGTTGAGAATGGTACTGGCGGGGGTTGGACTCTCCAAAGCCATGAGGTGGTGCCATACATAGCATTGGTGCTGCCTGTGTCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 90 bp ATCTCTGCTGACAGACACATGTGGCTTGTACCTGCCAGGTCTTCATaGAGCTCTGTATGGTCCTACCTGAGGGGAGCGTCCTGTATGCAG +
Preference number: 5 (lower is better)
Translates to: ISADRHMWLVPARSS*SSVWSYLRGASCMQ
Trigger: CTGCATACAGGACGCTCCCCTCAGGTAGGACCATACAGAGCTCCATGAAGACCTGGCAGGTACAAGCCACATGTGTCTGTCAGCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS GCA 90 bp TGGCTTTGGAGAGTCCAACCCCCGCCAGTACCATTCTCAACAAAGTaGATACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: WLWRVQPPPVPFSTK*ILIQVDCFCVGSLG
Trigger: GCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTTGTTGAGAATGGTACTGGCGGGGGTTGGACTCTCCAAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS-3UTR CAA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATAGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIGSLTG*VQTSAS
Trigger: GGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCC...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS GCA 90 bp ACAACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCCAAGATGGCTCCACTGCTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: TTLYLVRATSKSPWV*IMLPAAKMAPLLSC
Trigger: ACAAGAAAGCAGTGGAGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS-3UTR CAA 90 bp ATCTTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: IFNWFGPDQCLPNLESSSFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...GGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCCAACTTCTGAGCCATCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: WSRPVPPQPGEQLPTSEPSQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGA...TGGCTCAGAAGTTGGGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCATCTCCTGATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: PSPDIGPGRSSSRPGCTAATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...TGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATATCAGGAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSGSLTG*VQTSAS
Trigger: GGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCC...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPGSLTG*VQTSAS
Trigger: GGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCC...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ATATTGGGCCAGGGCGTTCTTCTTCTCGCCCTGGTTGTACAGCAGCACAGCATAATGTTTCAGTTGGACTaGATTCCACCGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ILGQGVLLLALVVQQHSIMFQLD*IPPQAL
Trigger: CAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACAT...TATGCTGTGCTGCTGTACAACCAGGGCGAGAAGAAGAACGCCCTGGCCCAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTCAATACTCAGCAGGCTaGGCCTCAACTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTAQYSAG*ASTSRA
Trigger: AGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATTG...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGAGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGGSLTG*VQTSAS
Trigger: GGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCC...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCAGCTGCTGAAGACATaGCCTGTCCTAGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSQLLKT*PVLELD
Trigger: ATCAAGCTCTAGGACAGGCAATGTCTTCAGCAGCTG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAATGTTTCAGTTGGACTaGATTCCACCGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPMFQLD*IPPQAL
Trigger: CAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACAT...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACATGTTTCAGTTGGACTaGATTCCACCGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHMFQLD*IPPQAL
Trigger: CAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACAT...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGAATACAGGGAGGGACTaGTTCTGGATTCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSNTGRD*FWIPFG
Trigger: CCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATT...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACGCTAAGTATCCAGACTaGCCCCAGGCGACCAGTTCC +
Preference number: 5 (lower is better)
Translates to: SCLLRFRALCNWSCALLNAKYPD*PQATSS
Trigger: GGAACTGGTCGCCTGGGGCAAGTCTGGATACTTAGC...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS GCA 90 bp CAACAGAGACTACCTAGGCCAGGGTTGAAAAAGGGATCTCTACCCTaGTGTCTAGAAGATGCCAGCGGAGTAAATCCTGGAAGAGTCAAG +
Preference number: 5 (lower is better)
Translates to: QQRLPRPGLKKGSLP*CLEDASGVNPGRVK
Trigger: CTTGACTCTTCCAGGATTTACTCCGCTGGCATCTTCTAGACAGCAGGGTAGAGATCCCTTTTTCAACCCTGGCCTAGGTAGTCTCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS GCA 90 bp GGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTaGAACAAAGAAAGCACTGCAGCTGGAGAGCTCAGCTGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: GSLGIFYIFQIGQSH*NKESTAAGELSCQE
Trigger: CTCTTGGCAGCTGAGCTCTCCAGCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS-3UTR CAA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: LVITHTVFCGGCHSALPVIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTCTATATCTTCCAGATaGGTCAGAGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPSISSR*VRATAK
Trigger: CTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGA...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTTCTATATCTTCCAGATaGGTCAGAGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: CWLLVITHTVFCGGCHSASISSR*VRATAK
Trigger: CTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGA...AGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGGATCTTTAACTGGTTaGGTCCAGACCAGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSLPPASGSSPALYKSDRGSLTG*VQTSAS
Trigger: GGAGGCACTGGTCTGGACCAAACCAGTTAAAGATCC...ACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTGGCAGGTTTGCTGGTaGAAGTGGTCTGGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: LSCRLQWPCPSLPPASGSWQVCW*KWSGAL
Trigger: CAAAGCACCAGACCACTTCAACCAGCAAACCTGCCA...AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATTGGAAACTGGCAGGTTaGCTGGTTGAAGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANWKLAG*LVEVVW
Trigger: CCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGTTCTGGATTCCCTTaGGGCAAATGCAGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPCSGFP*GKCSCN
Trigger: ATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACA...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS CCA 90 bp CTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTaGTCAGAGCCACTGCAACAAAGAAAGCACTGCAGCTGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LLLRRLSWHFLYLPD*SEPLQQRKHCSWRA
Trigger: AGCTCTCCAGCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGAGTAGATACAGGAAATaGAGTTCTCGTCGCGACTCT +
Preference number: 5 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSSRYRK*SSRRDS
Trigger: AGAGTCGCGACGAGAACTCAATTTCCTGTATCTACT...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000567279.5
CDS-3UTR CAA 90 bp ATCTTTAACTGGTTTGGTCCAGACCAGTGCCTCCCCAACCTGGAGAGCAGCTCCTCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: IFNWFGPDQCLPNLESSSSQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGA...GGAGCTGCTCTCCAGGTTGGGGAGGCACTGGTCTGGACCAAACCAGTTAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCATGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LAPRNNTHCILWWVPLCSNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...AGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: LVITHTVFCGGCHSALPVIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCAATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: AQLLAPRNNTHCILWWVPIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...TGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: TSMALSKSPSSKWIFPSIIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...AATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAATTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: LHCFLVDFNGLVQVSLQQLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...TTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: HCFLVDFNGLVQVSLQQVIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...CACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATTCTATATCTTCCAGATaGGTCAGAGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: FNGLVQVSLQQVDLPQHYSISSR*VRATAK
Trigger: CTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGA...ATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGTGGAGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCATCTATATCTTCCAGATaGGTCAGAGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: SGGLSGTAQATTLYLVRASISSR*VRATAK
Trigger: CTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGA...TGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGTTTCAGTTGGACTaGATTCCACCGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQMFQLD*IPPQAL
Trigger: CAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACAT...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCAGTTCTGATGTTTCAGTaGGACTTGATTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: VITHTVFCGGCHSALPVSVLMFQ*DLIPPQ
Trigger: CTGCGGTGGAATCAAGTCCAACTGAAACATCAGAAC...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATGTTCTGATGTTTCAGTaGGACTTGATTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: QWPCPSLPPASGSSPALYVLMFQ*DLIPPQ
Trigger: CTGCGGTGGAATCAAGTCCAACTGAAACATCAGAAC...ATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCACAATACTCAGCAGGCTaGGCCTCAACTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SRTKYREGLVLDSLWANAQYSAG*ASTSRA
Trigger: AGCCCTGGAAGTTGAGGCCAAGCCTGCTGAGTATTG...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS TCA 90 bp CTCAGTTTAGGACTGGAAACATTTTCTCAGAGTGTCAATTCCTGCTaGGCCACCACATACTTAGGAGACACATCCCTCCACACTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LSLGLETFSQSVNSC*ATTYLGDTSLHTEV
Trigger: GACCTCAGTGTGGAGGGATGTGTCTCCTAAGTATGTGGTGGCTCAGCAGGAATTGACACTCTGAGAAAATGTTTCCAGTCCTAAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 90 bp AAGAGAACCTCACTGAAAGCTATAATCTCTGCTGACAGACACATGTaGCTTGTACCTGCCAGGTCTTCATGGAGCTCTGTATGGTCCTAC +
Preference number: 5 (lower is better)
Translates to: KRTSLKAIISADRHM*LVPARSSWSSVWSY
Trigger: GTAGGACCATACAGAGCTCCATGAAGACCTGGCAGGTACAAGCCACATGTGTCTGTCAGCAGAGATTATAGCTTTCAGTGAGGTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS-3UTR CAA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGAAGTAGATACAGGAAATaGAGTTCTCGTCGCGACTCT +
Preference number: 5 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGSRYRK*SSRRDS
Trigger: AGAGTCGCGACGAGAACTCAATTTCCTGTATCTACT...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: LSCRLQWPCPSLPPASGSFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGGCTCCTCGCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: KCQYQVGRRTLGSTAGSSQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...CGAGGAGCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: LVITHTVFCGGCHSALPVQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...CACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCATGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: VITHTVFCGGCHSALPVSWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: HCFLVDFNGLVQVSLQQVNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...CACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SMALSKSPSSKWIFPSIINWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: SCRLQWPCPSLPPASGSSIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...GGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: HCFLVDFNGLVQVSLQQVIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...CACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTCACTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: FTFPGLWGSRGFPTSNANLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...ATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ATGTACCTTGCTGACTCAGCTACATACATAAGGCCTCAAGCCTTGCTGCCAGTTGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: MYLADSATYIRPQALLPVATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...AACTGGCAGCAAGGCTTGAGGCCTTATGTATGTAGCTGAGTCAGCAAGGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ITELLSRGLSQLFLELRKIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp GCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ALLAFSISSRLVRATAKSIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...GCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGTCTATATCTTCCAGATaGGTCAGAGCCACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQSISSR*VRATAK
Trigger: CTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGA...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGAAATTCCAGAGAGCTATaGTCCTTGAGTAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGNSREL*SLSRLT
Trigger: AGTCAGCCTACTCAAGGACAATAGCTCTCTGGAATT...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTTGGCAGGTTTGCTGGTaGAAGTGGTCTGGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: FVFALGTNKPHNLRITSVWQVCW*KWSGAL
Trigger: CAAAGCACCAGACCACTTCAACCAGCAAACCTGCCA...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCATGGCAGGTTTGCTGGTaGAAGTGGTCTGGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SRTKYREGLVLDSLWANAWQVCW*KWSGAL
Trigger: CAAAGCACCAGACCACTTCAACCAGCAAACCTGCCA...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATTGGAAACTGGCAGGTTaGCTGGTTGAAGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LSRTKYREGLVLDSLWANWKLAG*LVEVVW
Trigger: CCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAACAGCTGCTGAAGACATaGCCTGTCCTAGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKQLLKT*PVLELD
Trigger: ATCAAGCTCTAGGACAGGCAATGTCTTCAGCAGCTG...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGATGTTTCAGTTGGACTaGATTCCACCGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RSCLLRFRALCNWSCALLMFQLD*IPPQAL
Trigger: CAGAGCCTGCGGTGGAATCAAGTCCAACTGAAACAT...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGGTTCTGATGTTTCAGTaGGACTTGATTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: IQVDCFCVGSLGIFYIFQVLMFQ*DLIPPQ
Trigger: CTGCGGTGGAATCAAGTCCAACTGAAACATCAGAAC...CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATACAGCATCATGTACCTaGCTGACTCAGCTACATACA +
Preference number: 5 (lower is better)
Translates to: QWPCPSLPPASGSSPALYTASCT*LTQLHT
Trigger: TGTATGTAGCTGAGTCAGCAAGGTACATGATGCTGT...ATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS TCA 90 bp ACATATGAGTCTGAAGAGAACCTCACTGAAAGCTATAATCTCTGCTaGCAGACACATGTGGCTTGTACCTGCCAGGTCTTCATGGAGCTC +
Preference number: 5 (lower is better)
Translates to: TYESEENLTESYNLC*QTHVACTCQVFMEL
Trigger: GAGCTCCATGAAGACCTGGCAGGTACAAGCCACATGTGTCTGTCAGCAGAGATTATAGCTTTCAGTGAGGTTCTCTTCAGACTCATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS CCA 90 bp AAAGTGCATACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGA +
Preference number: 5 (lower is better)
Translates to: KVHTYPGGLLLRRLS*HFLYLPDWSEPLPR
Trigger: TCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000569151.1
CDS CCA 90 bp AAGGGTTACACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTaGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCAACAA +
Preference number: 5 (lower is better)
Translates to: KGYTYPGGLLLRRLS*HFLYLPDWSEPLQQ
Trigger: TTGTTGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTGTAACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS-3UTR CAA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: SCLLRFRALCNWSCALLNFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: RSCLLRFRALCNWSCALLFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTTTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: QIVPIKIQGIVQLVLCLVFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...AACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: SMALSKSPSSKWIFPSIIQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: LLSCRLQWPCPSLPPASGQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...TCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: GLVQVSLQQVDLPQHYISQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...ACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCAGGTTTACTAAAGGGTTACACTTATCCAGGTGGACTGCTTCTGCGTAGGCTCAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SGLLKGYTYPGGLLLRRLNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...GAGCCTACGCAGAAGCAGTCCACCTGGATAAGTGTAACCCTTTAGTAAACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GTCAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: VRSCLLRFRALCNWSCALIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...CAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGCCTTGTAGTTGGTAGGGTCATAAGTCAGTGCATTGCCAAGATGTTCAAATGCGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: GLVVGRVISQCIAKMFKCATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...GCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTGCCAAGAGCATGTAGAGGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: GIFYIFQIGQSHCQEHVEATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...CTCTACATGCTCTTGGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCAACTGCTGGCTCCTCGTAATAACACACACTGTATTCTGTGGTGGGTGCCACGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: LNCWLLVITHTVFCGGCHATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...GTGGCACCCACCACAGAATACAGTGTGTGTTATTACGAGGAGCCAGCAGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: TSMALSKSPSSKWIFPSIATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...AATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAATCTTTGGCTGGAAGTaGATGGCCGCACTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKIFGWK*MAALRK
Trigger: TTTTCTCAGTGCGGCCATCAACTTCCAGCCAAAGAT...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAATTCCAGAGAGCTATaGTCCTTGAGTAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQNSREL*SLSRLT
Trigger: AGTCAGCCTACTCAAGGACAATAGCTCTCTGGAATT...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp ATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTTGAACTAAGGAAGAATTCCAGAGAGCTATaGTCCTTGAGTAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: ITELLSRGLSQLFLELRKNSREL*SLSRLT
Trigger: AGTCAGCCTACTCAAGGACAATAGCTCTCTGGAATT...CTTCCTTAGTTCAAGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TCCGACCTCAAATGCCAATACCAGGTAGGTAGAAGGACCTTAGGCTCAACTGCTGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SDLKCQYQVGRRTLGSTAVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...AGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATTGGCATTTGAGGTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATAGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SMALSKSPSSKWIFPSIIVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...TATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGACTAAGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTGGCAGGTTTGCTGGTaGAAGTGGTCTGGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: GLRTAHVWKSSRDSWIFPWQVCW*KWSGAL
Trigger: CAAAGCACCAGACCACTTCAACCAGCAAACCTGCCA...AGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCTTAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGTGGAAACTGGCAGGTTaGCTGGTTGAAGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: RTAHVWKSSRDSWIFPSRWKLAG*LVEVVW
Trigger: CCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA...CCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTATGTTCTGATGTTTCAGTaGGACTTGATTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: RFRALCNWSCALLNCFRYVLMFQ*DLIPPQ
Trigger: CTGCGGTGGAATCAAGTCCAACTGAAACATCAGAAC...ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAGAGAGAAAAGTCCTTTaGAAAGCAGACAGCATCATG +
Preference number: 5 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPERKVL*KADSIM
Trigger: CATGATGCTGTCTGCTTTCAAAAGGACTTTTCTCTC...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp CCAAGGCTTTGTCATCACAGAGCTACTCAGCAGAGGTCTGTCTCAGCTGTTCCTATATTTGTGTTTGCCTaGGGGACTAATAAACCTCAC +
Preference number: 5 (lower is better)
Translates to: PRLCHHRATQQRSVSAVPIFVFA*GTNKPH
Trigger: GTGAGGTTTATTAGTCCCCAAGGCAAACACAAATAT...AGGAACAGCTGAGACAGACCTCTGCTGAGTAGCTCTGTGATGACAAAGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAATACAGGGAGGGACTaGTTCTGGATTCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: FVFALGTNKPHNLRITSVNTGRD*FWIPFG
Trigger: CCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATT...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS GCA 90 bp CCGCCAGTACCATTCTCAACAAAGTGCATACTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PPVPFSTKCILIQVD*FCVGSLGIFYIFQI
Trigger: AATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTTGTTGAGAATGGTACTGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000569151.1
CDS GCA 90 bp GGGTTACACCTGTGGCAGACAGAGATTCTATGGAGCTGGGGGCTCTaGAACAAATGGTCATTTAGAGATCCTTCTCATTACACAAAAACA +
Preference number: 5 (lower is better)
Translates to: GLHLWQTEILWSWGL*NKWSFRDPSHYTKT
Trigger: TGTTTTTGTGTAATGAGAAGGATCTCTAAATGACCATTTGTTGCAGAGCCCCCAGCTCCATAGAATCTCTGTCTGCCACAGGTGTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS CCA 90 bp TTCAGGTTTACTAAAGGGTTACACCTGTGGCAGACAGAGATTCTATaGAGCTGGGGGCTCTGCAACAAATGGTCATTTAGAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: FRFTKGLHLWQTEIL*SWGLCNKWSFRDPS
Trigger: AGAAGGATCTCTAAATGACCATTTGTTGCAGAGCCCCCAGCTCCATAGAATCTCTGTCTGCCACAGGTGTAACCCTTTAGTAAACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS-3UTR CAA 90 bp TCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACAGTAGATACAGGAAATaGAGTTCTCGTCGCGACTCT +
Preference number: 5 (lower is better)
Translates to: SCLLRFRALCNWSCALLNSRYRK*SSRRDS
Trigger: AGAGTCGCGACGAGAACTCAATTTCCTGTATCTACT...GTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000565160.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGATTTCTGCCGGGGTTTTaGAGACTCAGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRFLPGF*RLSRYR
Trigger: CCTGTATCTACTGAGTCTCAAAAACCCCGGCAGAAA...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp ACTTCAATGGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: TSMALSKSPSSKWIFPSIAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...AATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGCCTTGTAGTTGGTAGGGTCATAAGTCAGTGCATTGCCAAGATGTTCAAATGCTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: GLVVGRVISQCIAKMFKCWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...GCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTAAATTCCAGAGAGCTATaGTCCTTGAGTAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVNSREL*SLSRLT
Trigger: AGTCAGCCTACTCAAGGACAATAGCTCTCTGGAATT...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGTTCTGATGTTTCAGTaGGACTTGATTCCACCGCAG +
Preference number: 5 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLVLMFQ*DLIPPQ
Trigger: CTGCGGTGGAATCAAGTCCAACTGAAACATCAGAAC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGGAGAGAAAAGTCCTTTaGAAAGCAGACAGCATCATG +
Preference number: 5 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQERKVL*KADSIM
Trigger: CATGATGCTGTCTGCTTTCAAAAGGACTTTTCTCTC...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566400.5
CDS-3UTR CAA 90 bp GTAATAACACACACTGTATTCTGTGGTGGGTGCCACTCTGCTCTGCCTGTGTCAATATTTGTGTTTGCCTaGGGGACTAATAAACCTCAC +
Preference number: 5 (lower is better)
Translates to: VITHTVFCGGCHSALPVSIFVFA*GTNKPH
Trigger: GTGAGGTTTATTAGTCCCCAAGGCAAACACAAATAT...TGACACAGGCAGAGCAGAGTGGCACCCACCACAGAATACAGTGTGTGTTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TTTGTGTTTGCCTTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTTGTTCTGGATTCCCTTaGGGCAAATGCAGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: FVFALGTNKPHNLRITSVCSGFP*GKCSCN
Trigger: ATTGCAGCTGCATTTGCCCAAAGGGAATCCAGAACA...AACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAAGGCAAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
CDS TCA 90 bp CCTGACCCAAAGAAAGGCAAGGGTCTTCAGAATGAAAGAGTCAATTaGATGTCACACAGATGGGGACGGGAAAAAGACATGAAACACAAC +
Preference number: 5 (lower is better)
Translates to: PDPKKGKGLQNERVN*MSHRWGREKDMKHN
Trigger: GTTGTGTTTCATGTCTTTTTCCCGTCCCCATCTGTGTGACATTCAATTGACTCTTTCATTCTGAAGACCCTTGCCTTTCTTTGGGTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569001.1
CDS GCA 90 bp GTACCATTCTCAACAAAGTGCATACTTATCCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTGGTCAG +
Preference number: 5 (lower is better)
Translates to: VPFSTKCILIQVDCF*VGSLGIFYIFQIGQ
Trigger: CTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTTGTTGAGAATGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000569151.1
CDS CCA 90 bp TTTACTAAAGGGTTACACCTGTGGCAGACAGAGATTCTATGGAGCTaGGGGCTCTGCAACAAATGGTCATTTAGAGATCCTTCTCATTAC +
Preference number: 5 (lower is better)
Translates to: FTKGLHLWQTEILWS*GLCNKWSFRDPSHY
Trigger: GTAATGAGAAGGATCTCTAAATGACCATTTGTTGCAGAGCCCCCAGCTCCATAGAATCTCTGTCTGCCACAGGTGTAACCCTTTAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS-3UTR CAA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAAGTAGATACAGGAAATaGAGTTCTCGTCGCGACTCT +
Preference number: 5 (lower is better)
Translates to: SRTKYREGLVLDSLWANASRYRK*SSRRDS
Trigger: AGAGTCGCGACGAGAACTCAATTTCCTGTATCTACT...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268057.9
CDS-3UTR CAA 90 bp CCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTAGTAGATACAGGAAATaGAGTTCTCGTCGCGACTCT +
Preference number: 5 (lower is better)
Translates to: PIKIQGIVQLVLCLVELLSRYRK*SSRRDS
Trigger: AGAGTCGCGACGAGAACTCAATTTCCTGTATCTACT...AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000565160.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp AAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGAACTGCTTCAGGTACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: KIQGIVQLVLCLVELLQVQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...TACCTGAAGCAGTTCAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CAGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: QIVPIKIQGIVQLVLCLVQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...AACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CTTTTCCTGGCTTATGGGGCAGTAGAGGGTTTCCGACCTCAAATGCCAATACCAGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: LFLAYGAVEGFRPQMPIPAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...TGGTATTGGCATTTGAGGTCGGAAACCCTCTACTGCCCCATAAGCCAGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGGACTTTCTGGAACAGCACAAGCCACAACTCTGTATTTGGTGAGGGCAACATCTCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: RTFWNSTSHNSVFGEGNISQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGA...GATGTTGCCCTCACCAAATACAGAGTTGTGGCTTGTGCTGTTCCAGAAAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGATGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCAAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SRTKYREGLVLDSLWANANWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...TGCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGATCGTGCCTATTAAGAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LQQVDLPQHYISQIVPIKNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...CTTAATAGGCACGATCTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTTCTGGTGAGAACTCCACTGCTTTCTTGTAGACTTCAATGGCCTTGTCCAAGTATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: FLVRTPLLSCRLQWPCPSIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...ACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGTTCTCACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCTCGTTTGCCACAACTCTGTATTaGGTGAGGGCAACATCAAAG +
Preference number: 5 (lower is better)
Translates to: AQIIQNLPIKGCQVVGSFATTLY*VRATSK
Trigger: CTTTGATGTTGCCCTCACCAAATACAGAGTTGTGGC...AAACGAGCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 5 (lower is better)
Translates to: RSCLLRFRALCNWSCALLVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGATGGCAGGTTTGCTGGTaGAAGTGGTCTGGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ATYFFLPKKHIPMLFQSGWQVCW*KWSGAL
Trigger: CAAAGCACCAGACCACTTCAACCAGCAAACCTGCCA...TCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTTGGAAACTGGCAGGTTaGCTGGTTGAAGTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFWKLAG*LVEVVW
Trigger: CCAGACCACTTCAACCAGCAAACCTGCCAGTTTCCA...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCCAGAGTCAGCTGCTGAAGACATaGCCTGTCCTAGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: AATYFFLPKKHIPMLFQSQLLKT*PVLELD
Trigger: ATCAAGCTCTAGGACAGGCAATGTCTTCAGCAGCTG...ACTCTGGAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATACAGCATCATGTACCTaGCTGACTCAGCTACATACA +
Preference number: 5 (lower is better)
Translates to: LSRTKYREGLVLDSLWANTASCT*LTQLHT
Trigger: TGTATGTAGCTGAGTCAGCAAGGTACATGATGCTGT...ATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp AGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGTGGTATTCCAAATCATaGCTCACTCCAACTCCCCCT +
Preference number: 5 (lower is better)
Translates to: RTAHVWKSSRDSWIFPSRWYSKS*LTPTPP
Trigger: AGGGGGAGTTGGAGTGAGCAATGATTTGGAATACCA...CCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567279.5
CDS-3UTR CAA 90 bp CCCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: PSQEQNTGRDLFWIPFGQAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...TTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CTTGTCCAAGTCTCCCTCCAGCAAGTGGATCTTCCCCAGCATTATATAAGTCAGGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: LVQVSLQQVDLPQHYISQAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...CTGACTTATATAATGCTGGGGAAGATCCACTTGCTGGAGGGAGACTTGGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000565160.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGAACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: RTAHVWKSSRDSWIFPSRNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...CCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAAGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp AGATCGTGCCTATTAAGATTCAGGGCATTGTGCAACTGGTCTTGTGCCTTGTTGGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: RSCLLRFRALCNWSCALLATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...CAACAAGGCACAAGACCAGTTGCACAATGCCCTGAATCTTAATAGGCACGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp GGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTCAGCTGCTGAAGACATaGCCTGTCCTAGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GRVLGILGYFLLGEISMLQLLKT*PVLELD
Trigger: ATCAAGCTCTAGGACAGGCAATGTCTTCAGCAGCTG...AAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACACAGCATCATGTACCTaGCTGACTCAGCTACATACA +
Preference number: 5 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHTASCT*LTQLHT
Trigger: TGTATGTAGCTGAGTCAGCAAGGTACATGATGCTGT...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TTGGGGACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTGAGAGAAAAGTCCTTTaGAAAGCAGACAGCATCATG +
Preference number: 5 (lower is better)
Translates to: LGTNKPHNLRITSVKPRLERKVL*KADSIM
Trigger: CATGATGCTGTCTGCTTTCAAAAGGACTTTTCTCTC...AAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGTCCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp AAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACAGAGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: KPHNLRITSVKPRLCHHRGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...TCTGTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp ACTGCACATGTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: TAHVWKSSRDSWIFPSRRGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...TCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGACATGTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566400.5
ENST00000566938.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: QCLDIDSIFTQSLSLLKLQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...CAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CTGATGGCCGCCACATATTTCTTCTTGCCAAAGAAACACATTCCAATGTTATTCATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: LMAATYFFLPKKHIPMLFIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...GAATAACATTGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGCGGCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: GRVLGILGYFLLGEISMLLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...AAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp GACAAGGCCCAAATTATACAGAATCTTCCAATCAAAGGGTGCCAAGTAGTTGGCGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: DKAQIIQNLPIKGCQVVGATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...GCCAACTACTTGGCACCCTTTGATTGGAAGATTCTGTATAATTTGGGCCTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp GCCAAAGAAACACATTCCAATGTTATTCCAGAGTGGAGGACTTTCTGGAACAGCGCCACATATTTCTTCTaGCCAAAGAAACACATTCCA +
Preference number: 5 (lower is better)
Translates to: AKETHSNVIPEWRTFWNSATYFF*PKKHIP
Trigger: TGGAATGTGTTTCTTTGGCAAGAAGAAATATGTGGC...GCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTGGAATGTGTTTCTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000561914.5
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp CTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAATGCCAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 5 (lower is better)
Translates to: LKNKIQGGTCSGFPLGKCQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...GCATTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp CCTCTCAAGAACAAAATACAGGGAGGGACTTGTTCTGGATTCCCTTTGGGCAAACAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 5 (lower is better)
Translates to: PLKNKIQGGTCSGFPLGKQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...TTTGCCCAAAGGGAATCCAGAACAAGTCCCTCCCTGTATTTTGTTCTTGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268057.9
ENST00000395205.6
CDS-3UTR CAA 90 bp GGCCTTGTAGTTGGTAGGGTCATAAGTCAGTGCATTGCCAAGATGTTCAAATGCCAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 5 (lower is better)
Translates to: GLVVGRVISQCIAKMFKCQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...GCATTTGAACATCTTGGCAATGCACTGACTTATGACCCTACCAACTACAAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TATCCAGGTGGACTGCTTCTGCGTAGGCTCTCTTGGCATTTTCTATATCTTCCACAAGAAAACCCTATTTaGGGGTCATTCATTCTATTC +
Preference number: 5 (lower is better)
Translates to: YPGGLLLRRLSWHFLYLPQENPI*GSFILF
Trigger: GAATAGAATGAATGACCCCAAAATAGGGTTTTCTTG...TGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACTCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHSQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGA...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268057.9
CDS-3UTR CAA 90 bp GTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGACATTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: VLGILGYFLLGEISMLGHWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...ATGTCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp GTCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: VWKSSRDSWIFPSRRNINWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...ATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTTGGTCTTGTGCCTTGTaGAACTGCTTCAGGTATATG +
Preference number: 5 (lower is better)
Translates to: PCRLHNLSGYNEDESTSSWSCAL*NCFRYM
Trigger: CATATACCTGAAGCAGTTCAACAAGGCACAAGACCA...AGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGTTCTTTAACTGGTCTTGTGCCTaGTTGAACTGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LDIDSIFTQSLSLLKLFFNWSCA*LNCFRY
Trigger: ATACCTGAAGCAGTTCAACAAGGCACAAGACCAGTT...AAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTCTGATTGTGCAACTGGTCTaGTGCCTTGTTGAACTGCTT +
Preference number: 5 (lower is better)
Translates to: LAGFIIFPDIMKMNQPVLIVQLV*CLVELL
Trigger: AAGCAGTTCAACAAGGCACAAGACCAGTTGCACAAT...CAGAACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TTATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTTTAAGATTCAGGGCATaGTGCAACTGGTCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: LWLISQSFWLSLAASLYTLRFRA*CNWSCA
Trigger: GGCACAAGACCAGTTGCACAATGCCCTGAATCTTAA...AGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGAATTCCAGAGAGCTATaGTCCTTGAGTAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: SGRVLGILGYFLLGEISMNSREL*SLSRLT
Trigger: AGTCAGCCTACTCAAGGACAATAGCTCTCTGGAATT...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000566400.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATCACATATTTGTGTTTGCCTaGGGGACTAATAAACCTCAC +
Preference number: 5 (lower is better)
Translates to: NKPHNLRITSVKPRLCHHIFVFA*GTNKPH
Trigger: GTGAGGTTTATTAGTCCCCAAGGCAAACACAAATAT...GTGATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268057.9
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp ACTAATAAACCTCACAACCTGAGGATCACCTCAGTTAAACCAAGGCTTTGTCATGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: TNKPHNLRITSVKPRLCHGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...ATGACAAAGCCTTGGTTTAACTGAGGTGATCCTCAGGTTGTGAGGTTTATTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395205.6
ENST00000566400.5
CDS-3UTR CAA 90 bp TCTGGAAGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: SGRVLGILGYFLLGEISMQSLSL*KLFFDN
Trigger: GTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTG...CATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCTTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CAATGCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTTGAAGCTGGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: QCLDIDSIFTQSLSLLKLAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...CAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp CTGAGTCTCTTGAAGCTGTTCTTTGATAACAGCCTTGCAGGCTTCATAATCTTTTCCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: LSLLKLFFDNSLAGFIIFSQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGA...AAAGATTATGAAGCCTGCAAGGCTGTTATCAAAGAACAGCTTCAAGAGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000563600.5
CDS-3UTR CAA 90 bp AGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTTGGCCAATCTTTCTGGTaGAGTTTAGCTGCTTCATTA +
Preference number: 5 (lower is better)
Translates to: SLAGFIIFPDIMKMNQPVGQSFW*SLAASL
Trigger: TAATGAAGCAGCTAAACTCAACCAGAAAGATTGGCC...AACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569440.5
CDS-3UTR CAA 90 bp CAGCCTTGCAGGCTTCATAATCTTTCCGGATATAATGAAGATGAATCAACCAGTGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: QPCRLHNLSGYNEDESTSAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...ACTGGTTGATTCATCTTCATTATATCCGGAAAGATTATGAAGCCTGCAAGGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000569440.5
CDS-3UTR CAA 90 bp TTATGGCTGATCTCCCAATCTTTCTGGTTGAGTTTAGCTGCTTCATTATATACTGTCTGGTGCTTTGATTaGGGATCTTTAACTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LWLISQSFWLSLAASLYTVWCFD*GSLTGL
Trigger: CAAACCAGTTAAAGATCCCAAATCAAAGCACCAGAC...AGTATATAATGAAGCAGCTAAACTCAACCAGAAAGATTGGGAGATCAGCCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000567279.5
CDS-3UTR CAA 90 bp AGAGTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGAGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: RVLGILGYFLLGEISMLGAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...TCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS-3UTR CAA 90 bp GTTCTAGGGATTCTTGGATATTTCCTTCTAGGCGAAATATCAATGCTTGGACATGCGAAATATCAATGCTaGGACATAGATAGCATATTC +
Preference number: 5 (lower is better)
Translates to: VLGILGYFLLGEISMLGHAKYQC*DIDSIF
Trigger: GAATATGCTATCTATGTCCAAGCATTGATATTTCGC...ATGTCCAAGCATTGATATTTCGCCTAGAAGGAAATATCCAAGAATCCCTAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000562084.5
ENST00000563600.5
ENST00000566400.5
ENST00000566938.5
ENST00000567279.5
ENST00000569440.5
CDS GCA 72 bp CGCTGCATGGGACAAAAGCCACCCGCCAGCTTGCCTTaGCCTGCGGCCGGGCAACTAAAGAGAATCTCGGCG +
Preference number: 6 (lower is better)
Translates to: RCMGQKPPASLP*PAAGQLKRISA
Trigger: CGCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS CAA 72 bp CCGCTGCATGGGACAAAAGCCACCCGCCAGCTTGCCTaGCCCTGCGGCCGGGCAACTAAAGAGAATCTCGGC +
Preference number: 6 (lower is better)
Translates to: PLHGTKATRQLA*PCGRATKENLG
Trigger: GCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS CAA 90 bp CTCCAGGAACCGCTGCATGGGACAAAAGCCACCCGCCAGCTTGCCTaGCCCTGCGGCCGGGCAACTAAAGAGAATCTCGGCGCTCACCGT +
Preference number: 6 (lower is better)
Translates to: LQEPLHGTKATRQLA*PCGRATKENLGAHR
Trigger: ACGGTGAGCGCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS CAA 90 bp CCTCTCTCCAGGAACCGCTGCATGGGACAAAAGCCACCCGCCAGCTaGCCTTGCCCTGCGGCCGGGCAACTAAAGAGAATCTCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: PLSRNRCMGQKPPAS*PCPAAGQLKRISAL
Trigger: GAGCGCCGAGATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCTGGAGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS CAA 72 bp AGGAACCGCTGCATGGGACAAAAGCCACCCGCCAGCTaGCCTTGCCCTGCGGCCGGGCAACTAAAGAGAATC +
Preference number: 6 (lower is better)
Translates to: RNRCMGQKPPAS*PCPAAGQLKRI
Trigger: GATTCTCTTTAGTTGCCCGGCCGCAGGGCAAGGCAAGCTGGCGGGTGGCTTTTGTCCCATGCAGCGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562084.5
CDS CCA 72 bp GACAGACACATGTGGCTTGTACCTGCCAGGTCTTCATaGAGCTCTGTATGGTCCTACCTGAGGGGAGCGTCC +
Preference number: 6 (lower is better)
Translates to: DRHMWLVPARSS*SSVWSYLRGAS
Trigger: GGACGCTCCCCTCAGGTAGGACCATACAGAGCTCCATGAAGACCTGGCAGGTACAAGCCACATGTGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS GCA 72 bp TATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCCAAGATGGCTCCACTG +
Preference number: 6 (lower is better)
Translates to: YLVRATSKSPWV*IMLPAAKMAPL
Trigger: CAGTGGAGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS GCA 72 bp CCTAGAACAGGACCTGTGCTGCTAAGTATCCAGACTTaGCCCAGGCGACCAGTTCCCGGGACAGTAAAAAGG +
Preference number: 6 (lower is better)
Translates to: PRTGPVLLSIQT*PRRPVPGTVKR
Trigger: CCTTTTTACTGTCCCGGGAACTGGTCGCCTGGGGCAAGTCTGGATACTTAGCAGCACAGGTCCTGTTCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562084.5
ENST00000566829.1
CDS CCA 72 bp ACAGGCAGCACCAATGCTATGTATGGCACCACCTCATaGCTTTGGAGAGTCCAACCCCCGCCAGTACCATTC +
Preference number: 6 (lower is better)
Translates to: TGSTNAMYGTTS*LWRVQPPPVPF
Trigger: GAATGGTACTGGCGGGGGTTGGACTCTCCAAAGCCATGAGGTGGTGCCATACATAGCATTGGTGCTGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 72 bp TGGTCAGAGCCACTGCAACAAAGAAAGCACTGCAGCTaGAGAGCTCAGCTGCCAAGAGCATGTAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: WSEPLQQRKHCS*RAQLPRACRAP
Trigger: GGGAGCTCTACATGCTCTTGGCAGCTGAGCTCTCCAGCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS GCA 72 bp TATTTGGTGAGGGCAACATCAAAGTCCCCGTGGGTCTaGATCATGCTGCCTGCTGCCAAGATGGCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: YLVRATSKSPWV*IMLPAAKMACK
Trigger: CTTACAGGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569338.5
CDS CCA 72 bp ACTCTGTATTTGGTGAGGGCAACATCAAAGTCCCCGTaGGTCTGCATCATGCTGCCTGCTGCCAAGATGGCT +
Preference number: 6 (lower is better)
Translates to: TLYLVRATSKSP*VCIMLPAAKMA
Trigger: AGCCATCTTGGCAGCAGGCAGCATGATGCAGACCCACGGGGACTTTGATGTTGCCCTCACCAAATACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CAA 72 bp CAGCACCAATGCTATGTATGGCACCACCTCATGGCTTaGGAGAGTCCAACCCCCGCCAGTACCATTCTCAAC +
Preference number: 6 (lower is better)
Translates to: QHQCYVWHHLMA*ESPTPASTILN
Trigger: GTTGAGAATGGTACTGGCGGGGGTTGGACTCTCCAAAGCCATGAGGTGGTGCCATACATAGCATTGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS GCA 72 bp CCAGATTGGTCAGAGCCACTGCAACAAAGAAAGCACTaGAGCTGGAGAGCTCAGCTGCCAAGAGCATGTAGA +
Preference number: 6 (lower is better)
Translates to: PDWSEPLQQRKH*SWRAQLPRACR
Trigger: TCTACATGCTCTTGGCAGCTGAGCTCTCCAGCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCAATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS CAA 90 bp CAAATCTGGCATCTCAGCCCTCAACAGAGACTACCTAGGCCAGGGTaGAAAAAGGGATCTCTACCCTGCTGTCTAGAAGATGCCAGCGGA +
Preference number: 6 (lower is better)
Translates to: QIWHLSPQQRLPRPG*KKGSLPCCLEDASG
Trigger: TCCGCTGGCATCTTCTAGACAGCAGGGTAGAGATCCCTTTTTCAACCCTGGCCTAGGTAGTCTCTGTTGAGGGCTGAGATGCCAGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000568535.1
CDS CCA 72 bp GCCAAGATGGCTCCACTGCTTTCTTGTAGACTTCAATaGCCTTGTCCAAGTCTCCCTCCAGCAAGTGGATCT +
Preference number: 6 (lower is better)
Translates to: AKMAPLLSCRLQ*PCPSLPPASGS
Trigger: AGATCCACTTGCTGGAGGGAGACTTGGACAAGGCCATTGAAGTCTACAAGAAAGCAGTGGAGCCATCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS CCA 72 bp TGGCCTAACAAGCAAAGCTGGTATTGGGACCAAATCTaGCATCTCAGCCCTCAACAGAGACTACCTAGGCCA +
Preference number: 6 (lower is better)
Translates to: WPNKQSWYWDQI*HLSPQQRLPRP
Trigger: TGGCCTAGGTAGTCTCTGTTGAGGGCTGAGATGCCAGATTTGGTCCCAATACCAGCTTTGCTTGTTAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS TCA 72 bp AGCCACCACATACTTAGGAGACACATCCCTCCACACTaGGGTCTGCTATGTACTAATGCCATAGAGGAACAG +
Preference number: 6 (lower is better)
Translates to: SHHILRRHIPPH*GLLCTNAIEEQ
Trigger: CTGTTCCTCTATGGCATTAGTACATAGCAGACCTCAGTGTGGAGGGATGTGTCTCCTAAGTATGTGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS TCA 72 bp GGACTGGAAACATTTTCTCAGAGTGTCAATTCCTGCTaGGCCACCACATACTTAGGAGACACATCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: GLETFSQSVNSC*ATTYLGDTSLH
Trigger: GTGGAGGGATGTGTCTCCTAAGTATGTGGTGGCTCAGCAGGAATTGACACTCTGAGAAAATGTTTCCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562219.1
CDS GCA 72 bp GGCATTTTCTATATCTTCCAGATTGGTCAGAGCCACTaGAACAAAGAAAGCACTGCAGCTGGAGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: GIFYIFQIGQSH*NKESTAAGELS
Trigger: GCTGAGCTCTCCAGCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS TCA 72 bp TCTGAAGAGAACCTCACTGAAAGCTATAATCTCTGCTaGCAGACACATGTGGCTTGTACCTGCCAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SEENLTESYNLC*QTHVACTCQVF
Trigger: GAAGACCTGGCAGGTACAAGCCACATGTGTCTGTCAGCAGAGATTATAGCTTTCAGTGAGGTTCTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS GCA 72 bp CTGTGGCAGACAGAGATTCTATGGAGCTGGGGGCTCTaGAACAAATGGTCATTTAGAGATCCTTCTCATTAC +
Preference number: 6 (lower is better)
Translates to: LWQTEILWSWGL*NKWSFRDPSHY
Trigger: GTAATGAGAAGGATCTCTAAATGACCATTTGTTGCAGAGCCCCCAGCTCCATAGAATCTCTGTCTGCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568535.1
CDS CCA 72 bp CGTAGGCTCTCTTGGCATTTTCTATATCTTCCAGATTaGTCAGAGCCACTGCAACAAAGAAAGCACTGCAGC +
Preference number: 6 (lower is better)
Translates to: RRLSWHFLYLPD*SEPLQQRKHCS
Trigger: GCTGCAGTGCTTTCTTTGTTGCAGTGGCTCTGACCAATCTGGAAGATATAGAAAATGCCAAGAGAGCCTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566197.1
CDS GCA 72 bp TCAACAAAGTGCATACTTATCCAGGTGGACTGCTTCTaGGTAGGCTCTCTTGGCATTTTCTATATCTTCCAG +
Preference number: 6 (lower is better)
Translates to: STKCILIQVDCF*VGSLGIFYIFQ
Trigger: CTGGAAGATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000569151.1
CDS GCA 72 bp CCATTCTCAACAAAGTGCATACTTATCCAGGTGGACTaGTTCTGCGTAGGCTCTCTTGGCATTTTCTATATC +
Preference number: 6 (lower is better)
Translates to: PFSTKCILIQVD*FCVGSLGIFYI
Trigger: GATATAGAAAATGCCAAGAGAGCCTACGCAGAAGCAGTCCACCTGGATAAGTATGCACTTTGTTGAGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562219.1
ENST00000569151.1
CDS TCA 72 bp ATTGAATGTCACACAGATGGGGACGGGAAAAAGACATaGAACACAACTAGATGCCTATTGCTGATACTGTGG +
Preference number: 6 (lower is better)
Translates to: IECHTDGDGKKT*NTTRCLLLILW
Trigger: CCACAGTATCAGCAATAGGCATCTAGTTGTGTTTCATGTCTTTTTCCCGTCCCCATCTGTGTGACATTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569001.1
CDS TCA 72 bp AAGAAAGGCAAGGGTCTTCAGAATGAAAGAGTCAATTaGATGTCACACAGATGGGGACGGGAAAAAGACATG +
Preference number: 6 (lower is better)
Translates to: KKGKGLQNERVN*MSHRWGREKDM
Trigger: CATGTCTTTTTCCCGTCCCCATCTGTGTGACATTCAATTGACTCTTTCATTCTGAAGACCCTTGCCTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569001.1
CDS CAA 90 bp GAAATCTTGGACATAGATAGCATATTCACACAATCCCTGAGTCTCTaGAAGCTGTTCTTTGATAACAGCCTTGCAGGCTTCATAATCTTT +
Preference number: 6 (lower is better)
Translates to: EILDIDSIFTQSLSL*KLFFDNSLAGFIIF
Trigger: AAAGATTATGAAGCCTGCAAGGCTGTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAATATGCTATCTATGTCCAAGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561914.5