Pregenerated sensors for BBIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000214413Ensembl transcript IDs: ENST00000398289.2, ENST00000422050.1, ENST00000448814.7, ENST00000605265.1, ENST00000605742.5, ENST00000651766.1, ENST00000651952.1, ENST00000652043.1, ENST00000652396.1, ENST00000652400.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGTCATTATATCTTCCACAAACAGTGGCCCTGTTATCCCAGCACTTaGGGATGCCAAAGGGGTTGGATTGTTTGTTTGAGCCCAGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CHYIFHKQWPCYPST*GCQRGWIVCLSPGV Trigger: AACCCCTGGGCTCAAACAAACAATCCAACCCCTTTGGCATCCCAAAGTGCTGGGATAACAGGGCCACTGTTTGTGGAAGATATAATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398289.2 ENST00000651766.1 |
||
| 3UTR-3UTR TCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGTTGGATTGTTTGTTTaGGCCCAGGGGTTTGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVVGLFV*AQGFET Trigger: GGTCTCAAACCCCTGGGCTCAAACAAACAATCCAAC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| 3UTR-3UTR GCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTCGAGATGGTGCCATTaGTCTCGTTTGGGCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVSRWCH*SRLGNK Trigger: CTTGTTGCCCAAACGAGAGCAATGGCACCATCTCGA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGTTATCCCAGCACTTTaGGATGCCAAAGGGGTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVVIPAL*DAKGVG Trigger: TCCAACCCCTTTGGCATCCCAAAGTGCTGGGATAAC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTGCAGTGAGTCGAGATaGTGCCATTGCTCTCGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVCSESR*CHCSRL Trigger: CAAACGAGAGCAATGGCACCATCTCGACTCACTGCA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGGATGCCAAAGGGGTTaGATTGTTTGTTTGAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVGCQRG*IVCLSP Trigger: TGGGCTCAAACAAACAATCCAACCCCTTTGGCATCC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCATCTTCCACAAACAGTaGCCCTGTTATCCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVIFHKQ*PCYPST Trigger: AGTGCTGGGATAACAGGGCCACTGTTTGTGGAAGAT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGCCATTGCTCTCGTTTaGGCAACAAGAGTGAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVAIALV*ATRVKL Trigger: GAGTTTCACTCTTGTTGCCCAAACGAGAGCAATGGC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCCAGTTTTGTCATTACTaGTGGGATCTGGTCACACAA | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVQFCHY*WDLVTQ Trigger: TTGTGTGACCAGATCCCACCAGTAATGACAAAACTG...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCATTACTGGTGGGATCTaGTCACACAAGATAGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVITGGI*SHKIAL Trigger: TAATGCTATCTTGTGTGACCAGATCCCACCAGTAAT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTTCATATTTACCTCATaGGCTTTATCAAGCCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: RIYEGTVRSILLTGLDIVFIFTS*ALSSPY Trigger: ATATGGGCTTGATAAAGCCCATGAGGTAAATATGAA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCAGGTGGGCGGATCACTaGAGGTTGGGAGTTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: RIYEGTVRSILLTGLDIVRWADH*RLGVHD Trigger: GTCATGAACTCCCAACCTCAAGTGATCCGCCCACCT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGCGGATCACTTGAGGTaGGGAGTTCATGACCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RIYEGTVRSILLTGLDIVADHLR*GVHDQL Trigger: AAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTGCCATTGCTCTCGTTaGGGCAACAAGAGTGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RIYEGTVRSILLTGLDIVCHCSR*GNKSET Trigger: AGTTTCACTCTTGTTGCCCAAACGAGAGCAATGGCA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCAGGTTTAAGACAGTTTaGTCATTACTGGTGGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: RIYEGTVRSILLTGLDIVRFKTV*SLLVGS Trigger: AGATCCCACCAGTAATGACAAAACTGTCTTAAACCT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR GCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCCCAGTAGTTCAAGGCTaGGGTGAGCTACGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVPVVQG*GELRLC Trigger: GCACAACCGTAGCTCACCGCAGCCTTGAACTACTGG...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| CDS-3UTR GCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCACAAACAGTGGCCCTTaGTTTGGAAGAACTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVTNSGP*FGRTSR Trigger: CCGGGAAGTTCTTCCAAAGCAAGGGCCACTGTTTGT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR TCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCAACTTCCCGGAACATTaGCTTCACTTCTGCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVNFPEH*LHFCHI Trigger: GATATGGCAGAAGTGAAGTCAATGTTCCGGGAAGTT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR TCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTGTCTTCAGGCATCTTaGAGGATATGCAAATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVCLQAS*RICKSW Trigger: CCAGGATTTGCATATCCTTCAAGATGCCTGAAGACA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651952.1 |
||
| CDS-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCATCTTCCACAAACAGTaGCCCTTGCTTTGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVIFHKQ*PLLWKN Trigger: GTTCTTCCAAAGCAAGGGCCACTGTTTGTGGAAGAT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR CCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCACCTGTCTCTTGCTTTaGAAGAACTTCCCGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVTCLLL*KNFPEH Trigger: ATGTTCCGGGAAGTTCTTCCAAAGCAAGAGACAGGT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| CDS-3UTR GCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTTCTGGTCTTTTTGCTaGAGCTTTAAGCATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVFWSFC*SFKHPT Trigger: GGTTGGATGCTTAAAGCTGCAGCAAAAAGACCAGAA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000652396.1 |
||
| CDS-3UTR TCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCCACTTCTGCCATATCTaGGTTGTTGGATATAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVHFCHI*VVGYSV Trigger: AACACTATATCCAACAACTCAGATATGGCAGAAGTG...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR TCA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCAACCACGTTGTTCTTTaGGATGTTAATGGACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIYEGTVRSILLTGLDIVNHVVL*DVNGLS Trigger: AGAAAGTCCATTAACATCTCAAAGAACAACGTGGTT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651952.1 |
||
| CDS CCA 90 bp | GGGTGTGGAGCCAAAGGGATGGTAGGGAGTGGGCTGCACCTAGTGTaGGGGAGATTAGTGCCAGTCACTTGCCTGGATAGAATGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCGAKGMVGSGLHLV*GRLVPVTCLDRMSV Trigger: AACAGACATTCTATCCAGGCAAGTGACTGGCACTAATCTCCCCCACACTAGGTGCAGCCCACTCCCTACCATCCCTTTGGCTCCACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS TCA 90 bp | AGATGCTTTTCTAGACGGTCCCACCCACTCAGTGATTCACCTTGCTaGTGCAACCTTACCATGCATCTTTCACAACATCACCCCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCFSRRSHPLSDSPC*CNLTMHLSQHHPHR Trigger: TCTGTGGGGGTGATGTTGTGAAAGATGCATGGTAAGGTTGCATCAGCAAGGTGAATCACTGAGTGGGTGGGACCGTCTAGAAAAGCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS GCA 90 bp | GGGAGTGGGCTGCACCTAGTGTGGGGGAGATTAGTGCCAGTCACTTaGCTGGATAGAATGTCTGTTTTAATAGGGTTGGTTCTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGLHLVWGRLVPVT*LDRMSVLIGLVLVS Trigger: AGAAACAAGAACCAACCCTATTAAAACAGACATTCTATCCAGGCAAGTGACTGGCACTAATCTCCCCCACACTAGGTGCAGCCCACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS TCA 90 bp | TTAGATTCACAGAGTGTGGAAGTCCAAGAGGAAGGTAAAAAGGACTaGAGGCCCAGAGTCAACTGTACAGTAGTACAAGCTACGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LDSQSVEVQEEGKKD*RPRVNCTVVQATEV Trigger: CACCTCCGTAGCTTGTACTACTGTACAGTTGACTCTGGGCCTTCAGTCCTTTTTACCTTCCTCTTGGACTTCCACACTCTGTGAATCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652400.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCCAGACGGCTCAGCTGTaGCCCCGGGTAACGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVQTAQL*PRVTVR Trigger: TCTCACCGTTACCCGGGGCAACAGCTGAGCCGTCTG...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448814.7 ENST00000651952.1 |
||
| CDS TCA 90 bp | AAAAACAATGAAACTTGGTGCTCTACCAAACCTCAGTTCTCTGTTTaGCTAAGCTGCCATTGTTACTGTAAAGGGTGTGGAGCCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNNETWCSTKPQFSV*LSCHCYCKGCGAKG Trigger: CCCTTTGGCTCCACACCCTTTACAGTAACAATGGCAGCTTAGTCAAACAGAGAACTGAGGTTTGGTAGAGCACCAAGTTTCATTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS GCA 90 bp | GGTCCCACCCACTCAGTGATTCACCTTGCTGATGCAACCTTACCATaGATCTTTCACAACATCACCCCCACAGATTTATTATTTATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPTHSVIHLADATLP*IFHNITPTDLLFIK Trigger: CTTTATAAATAATAAATCTGTGGGGGTGATGTTGTGAAAGATGCATGGTAAGGTTGCATCAGCAAGGTGAATCACTGAGTGGGTGGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CCA 90 bp | GGTGGATATAATCACTCAAGAAAGATATGGCAAAATGGTAAGTGGTaGGGTGATGGTAAAAAGAGACAAGGGTCTAGTGTGGTGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGYNHSRKIWQNGKW*GDGKKRQGSSVVVE Trigger: TTCAACCACCACACTAGACCCTTGTCTCTTTTTACCATCACCCCACCACTTACCATTTTGCCATATCTTTCTTGAGTGATTATATCCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652400.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCCACAAACAGTGGCCCTaGCTTTGGAAGAACTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVHKQWP*LWKNFP Trigger: CGGGAAGTTCTTCCAAAGCAAGGGCCACTGTTTGTG...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651952.1 ENST00000652396.1 |
||
| CDS GCA 90 bp | TCAGATTCTTACTCTGGAACGTCTAAGTTCCTGAAAACCTCTATCTaGTTTCCAGAACTTTGTCATCAAACTTCACCCCTATACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDSYSGTSKFLKTSI*FPELCHQTSPLYCS Trigger: AGAGCAGTATAGGGGTGAAGTTTGATGACAAAGTTCTGGAAAGCAGATAGAGGTTTTCAGGAACTTAGACGTTCCAGAGTAAGAATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGTGACAACCTGTCTCTaGCTTTGGAAGAACTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVVTTCL*LWKNFP Trigger: CGGGAAGTTCTTCCAAAGCAAGAGACAGGTTGTCAC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| CDS TCA 90 bp | AGAAGCACTACTTACTTAATAATTAGCGAAGCCCTTAGTCTTTCTTaGGTTACCAGTGTTTCCTTGTCTCTGTGTGTAGCTCCTAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSTTYLIISEALSLS*VTSVSLSLCVAPKR Trigger: TCTCTTAGGAGCTACACACAGAGACAAGGAAACACTGGTAACTCAAGAAAGACTAAGGGCTTCGCTAATTATTAAGTAAGTAGTGCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422050.1 |
||
| CDS TCA 90 bp | TTGGTGCCTGCCTTTACCAACCACTGCAAATTAATTATAATCAAGTaGAGCTTCTTCTGGTTTTTGTTATTCCCGCTCCACTACTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVPAFTNHCKLIIIK*SFFWFLLFPLHYFD Trigger: GTCAAAGTAGTGGAGCGGGAATAACAAAAACCAGAAGAAGCTTCACTTGATTATAATTAATTTGCAGTGGTTGGTAAAGGCAGGCACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS GCA 90 bp | CTAATAAAAGCTTCCTACTCTGTATTCAAGTCTCTTCCTCTCTCTTaGTCAGATTCTTACTCTGGAACGTCTAAGTTCCTGAAAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIKASYSVFKSLPLS*SDSYSGTSKFLKTS Trigger: AGAGGTTTTCAGGAACTTAGACGTTCCAGAGTAAGAATCTGAGCAAGAGAGAGGAAGAGACTTGAATACAGAGTAGGAAGCTTTTATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCAACCTGTCTCTTGCTTaGGAAGAACTTCCCGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVNLSLA*EELPGT Trigger: TGTTCCGGGAAGTTCTTCCAAAGCAAGAGACAGGTT...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGAACTTCCCGGAACATaGACTTCACTTCTGCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVELPGT*TSLLPY Trigger: ATATGGCAGAAGTGAAGTCAATGTTCCGGGAAGTTC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000651952.1 ENST00000652396.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTTGTCTTCAGGCATCTaGAAGGATATGCAAATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVLSSGI*KDMQIL Trigger: CAGGATTTGCATATCCTTCAAGATGCCTGAAGACAA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651952.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCGATGACTTAGAGTTCTaGACTCAAGCATACAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVDDLEF*TQAYRR Trigger: TCTTCTGTATGCTTGAGTCAAGAACTCTAAGTCATC...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000652396.1 |
||
| CDS-3UTR CAA 90 bp | AGAATTTATGAGGGTACTGTTAGGAGTATACTGCTTACAGGTTTAGATATAGTCTATCACTTTACTCCATaGTTATCTGACCTAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIYEGTVRSILLTGLDIVYHFTP*LSDLEL Trigger: AAGCTCTAGGTCAGATAACAATGGAGTAAAGTGATA...GACTATATCTAAACCTGTAAGCAGTATACTCCTAACAGTACCCTCATAAATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000448814.7 ENST00000651766.1 ENST00000652396.1 |
||
| CDS CAA 72 bp | ATAGGAACTTGCGGAGGCGTGGTCAAGAGCTCCGTTTaGCCGGAGTTAGGAGCTCCGCCCCGAGGTCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: IGTCGGVVKSSV*PELGAPPRGPR Trigger: GCGGGGACCTCGGGGCGGAGCTCCTAACTCCGGCAAAACGGAGCTCTTGACCACGCCTCCGCAAGTTCCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652043.1 |
||
| CDS CAA 72 bp | AGGAGCCCAGTAGTTCAAGGCTGCGGTGAGCTACGGTaGTGCCAGCTGTACCCAAGCCTGGGTGGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPVVQGCGELR*CQLYPSLGGRV Trigger: CACTCTGCCACCCAGGCTTGGGTACAGCTGGCACAACCGTAGCTCACCGCAGCCTTGAACTACTGGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000605265.1 ENST00000651766.1 |
||
| CDS CAA 90 bp | AAGAAATTAATAGGAACTTGCGGAGGCGTGGTCAAGAGCTCCGTTTaGCCGGAGTTAGGAGCTCCGCCCCGAGGTCCCCGCCCATTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KKLIGTCGGVVKSSV*PELGAPPRGPRPFP Trigger: GGGGAATGGGCGGGGACCTCGGGGCGGAGCTCCTAACTCCGGCAAAACGGAGCTCTTGACCACGCCTCCGCAAGTTCCTATTAATTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652043.1 |
||
| CDS TCA 72 bp | GGTTGTGCCAGCTGTACCCAAGCCTGGGTGGCAGAGTaGCAACCTGTCTCTTGCTTTGGAAGAACTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GCASCTQAWVAE*QPVSCFGRTSR Trigger: CCGGGAAGTTCTTCCAAAGCAAGAGACAGGTTGTCACTCTGCCACCCAGGCTTGGGTACAGCTGGCACAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651766.1 |
||
| CDS CCA 72 bp | GCCAAAGGGATGGTAGGGAGTGGGCTGCACCTAGTGTaGGGGAGATTAGTGCCAGTCACTTGCCTGGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: AKGMVGSGLHLV*GRLVPVTCLDR Trigger: TCTATCCAGGCAAGTGACTGGCACTAATCTCCCCCACACTAGGTGCAGCCCACTCCCTACCATCCCTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CCA 72 bp | CTCACTTTGCAACTAAGGTCAAAAATAAGCATTCCCTaGGGCACGGGCGGCCAGGCTATTAACACCCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LTLQLRSKISIP*GTGGQAINTLP Trigger: CGGAAGGGTGTTAATAGCCTGGCCGCCCGTGCCCCAGGGAATGCTTATTTTTGACCTTAGTTGCAAAGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605742.5 |
||
| CDS TCA 72 bp | TCTAGACGGTCCCACCCACTCAGTGATTCACCTTGCTaGTGCAACCTTACCATGCATCTTTCACAACATCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSHPLSDSPC*CNLTMHLSQHH Trigger: GTGATGTTGTGAAAGATGCATGGTAAGGTTGCATCAGCAAGGTGAATCACTGAGTGGGTGGGACCGTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CAA 72 bp | AACCACTGTTGTATATGCAGCCTACTGCTGATCACGTaGGTATACAGACAGTATTTCCTTCTCCCACACGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHCCICSLLLIT*VYRQYFLLPHG Trigger: GCCGTGTGGGAGAAGGAAATACTGTCTGTATACCAACGTGATCAGCAGTAGGCTGCATATACAACAGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CCA 72 bp | GGGGTGATGGTAAAAAGAGACAAGGGTCTAGTGTGGTaGTTGAAAGAAGCAGCTGAAGTCAGATTAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GVMVKRDKGLVW*LKEAAEVRLVT Trigger: AGTGACTAATCTGACTTCAGCTGCTTCTTTCAACCACCACACTAGACCCTTGTCTCTTTTTACCATCACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652400.1 |
||
| CDS GCA 72 bp | CACTCAGTGATTCACCTTGCTGATGCAACCTTACCATaGATCTTTCACAACATCACCCCCACAGATTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: HSVIHLADATLP*IFHNITPTDLL Trigger: TAATAAATCTGTGGGGGTGATGTTGTGAAAGATGCATGGTAAGGTTGCATCAGCAAGGTGAATCACTGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CAA 90 bp | AGGATGAAGGTTACTAGCATTGCAGACCCCCTGATTAGCCTTGAATaGAACTATCAAAACCACCACCTAGCCTCTCCATTAAATACATCA | + |
|
Preference number: 6 (lower is better) Translates to: RMKVTSIADPLISLE*NYQNHHLASPLNTS Trigger: TGATGTATTTAATGGAGAGGCTAGGTGGTGGTTTTGATAGTTCAATTCAAGGCTAATCAGGGGGTCTGCAATGCTAGTAACCTTCATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS GCA 72 bp | TACTCTGGAACGTCTAAGTTCCTGAAAACCTCTATCTaGTTTCCAGAACTTTGTCATCAAACTTCACCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: YSGTSKFLKTSI*FPELCHQTSPL Trigger: TAGGGGTGAAGTTTGATGACAAAGTTCTGGAAAGCAGATAGAGGTTTTCAGGAACTTAGACGTTCCAGAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS GCA 72 bp | CATCCCAGCATATATGCCATTTTTGCCAGTGACATTTaGTCCAAGTATTACAGTCAAGATTCTGCTATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSIYAIFASDI*SKYYSQDSAML Trigger: CAGCATAGCAGAATCTTGACTGTAATACTTGGAGCAAATGTCACTGGCAAAAATGGCATATATGCTGGGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CCA 72 bp | AATCACTCAAGAAAGATATGGCAAAATGGTAAGTGGTaGGGTGATGGTAAAAAGAGACAAGGGTCTAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NHSRKIWQNGKW*GDGKKRQGSSV Trigger: CACACTAGACCCTTGTCTCTTTTTACCATCACCCCACCACTTACCATTTTGCCATATCTTTCTTGAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652400.1 |
||
| CDS CAA 72 bp | CAGCAGACTACTCAATTAGGTATTCCTTCAGTATTGTaGAAAGCTGAGAACAGTCTCTTGACTTGCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQTTQLGIPSVL*KAENSLLTCRS Trigger: GCTTCTGCAAGTCAAGAGACTGTTCTCAGCTTTCAACAATACTGAAGGAATACCTAATTGAGTAGTCTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422050.1 |
||
| CDS CAA 90 bp | TTAAATGACCAGCAGACTACTCAATTAGGTATTCCTTCAGTATTGTaGAAAGCTGAGAACAGTCTCTTGACTTGCAGAAGCACTACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LNDQQTTQLGIPSVL*KAENSLLTCRSTTY Trigger: GTAAGTAGTGCTTCTGCAAGTCAAGAGACTGTTCTCAGCTTTCAACAATACTGAAGGAATACCTAATTGAGTAGTCTGCTGGTCATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422050.1 |
||
| CDS GCA 72 bp | TCAGTATTGTTGAAAGCTGAGAACAGTCTCTTGACTTaGAGAAGCACTACTTACTTAATAATTAGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLKAENSLLT*RSTTYLIISEA Trigger: GGCTTCGCTAATTATTAAGTAAGTAGTGCTTCTGCAAGTCAAGAGACTGTTCTCAGCTTTCAACAATACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422050.1 |
||
| CDS GCA 72 bp | GGAAGACAAGTTTTGAGCGTTCTACCCAAGAATCTATaGTACCATAAGACACAACTTTTTGTGTCAGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GRQVLSVLPKNL*YHKTQLFVSEV Trigger: AACTTCTGACACAAAAAGTTGTGTCTTATGGTAGCATAGATTCTTGGGTAGAACGCTCAAAACTTGTCTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CAA 72 bp | GCTTCTTCTGGTTTTTGTTATTCCCGCTCCACTACTTaGACATTCCTAATAAAAGCTTCCTACTCTGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSGFCYSRSTT*TFLIKASYSVF Trigger: GAATACAGAGTAGGAAGCTTTTATTAGGAATGTCAAAGTAGTGGAGCGGGAATAACAAAAACCAGAAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CAA 72 bp | CTATTTGTTATGAACATCCCAGCATATATGCCATTTTaGCCAGTGACATTTGCTCCAAGTATTACAGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFVMNIPAYMPF*PVTFAPSITVK Trigger: CTTGACTGTAATACTTGGAGCAAATGTCACTGGCAAAAATGGCATATATGCTGGGATGTTCATAACAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||
| CDS CAA 72 bp | ATTCCTTCAGTATTGTTGAAAGCTGAGAACAGTCTCTaGACTTGCAGAAGCACTACTTACTTAATAATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPSVLLKAENSL*TCRSTTYLIIS Trigger: GCTAATTATTAAGTAAGTAGTGCTTCTGCAAGTCAAGAGACTGTTCTCAGCTTTCAACAATACTGAAGGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422050.1 |
||
| CDS CAA 72 bp | ATTTTTCAGCTTCATTATAATCTTATAGAACCACTGTaGTATATGCAGCCTACTGCTGATCACGTTGGTATA | + |
|
Preference number: 6 (lower is better) Translates to: IFQLHYNLIEPL*YMQPTADHVGI Trigger: TATACCAACGTGATCAGCAGTAGGCTGCATATACAACAGTGGTTCTATAAGATTATAATGAAGCTGAAAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000605265.1 |
||