RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAZ2A (Homo sapiens)

Ensembl gene IDs: ENSG00000076108

Ensembl transcript IDs: ENST00000379441.7, ENST00000546695.5, ENST00000547453.1, ENST00000547647.1, ENST00000547650.1, ENST00000548578.1, ENST00000549327.1, ENST00000549506.5, ENST00000549763.1, ENST00000549787.5, ENST00000549884.6, ENST00000550730.1, ENST00000551759.1, ENST00000551812.5, ENST00000551959.1, ENST00000551996.1, ENST00000553222.1

Found 1173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGGAAGCAGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTACTGGCCGTCACTGCGGGTCCGCACA +
Preference number: 1 (lower is better)
Translates to: HGSSMSRARCPARHT*ELSPLYWPSLRVRT
Trigger: TGTGCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCTGCTTCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTACCTGGCCTCCATCTTAGGGTGCACC +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTHTQRSL*GRPHCYLASILGCT
Trigger: GGTGCACCCTAAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CCA 90 bp GCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGCACACAGTACAGAGTGTTTCTTGGT +
Preference number: 1 (lower is better)
Translates to: ARCPARHTWELSPLY*PSLRVRTQYRVFLG
Trigger: ACCAAGAAACACTCTGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 90 bp TTAGGAAGCTGGGGCCACATCTCACAAGGCAGGACCTGGATGCACTaGATCCCCCTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGG +
Preference number: 1 (lower is better)
Translates to: LGSWGHISQGRTWMH*IPLCSSNSARHLGR
Trigger: CCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAGGGGGATTCAGTGCATCCAGGTCCTGCCTTGTGAGATGTGGCCCCAGCTTCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR GCA 90 bp TCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTaGCTGTGGTCTCTTAAGCCAGTCATACCTATCCCAACGCCGTCT +
Preference number: 1 (lower is better)
Translates to: SIHTEGMEQEPLLFP*LWSLKPVIPIPTPS
Trigger: AGACGGCGTTGGGATAGGTATGACTGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR CCA 90 bp AGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATAGTCACATGTAGGGCAGTGATGGAC +
Preference number: 1 (lower is better)
Translates to: SAHGYSWESAAFLSC*GLNLDIVTCRAVMD
Trigger: GTCCATCACTGCCCTACATGTGACTATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 90 bp TCTACGTCTTGGTGTCTTATCCGTGAGTGGGAAGTGGTAAGCTGGTaGTGGTCCCATATTTGCTATGACAGGAACACAGAGGTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: STSWCLIREWEVVSW*WSHICYDRNTEVAA
Trigger: AGCTGCCACCTCTGTGTTCCTGTCATAGCAAATATGGGACCATCACCAGCTTACCACTTCCCACTCACGGATAAGACACCAAGACGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR TCA 90 bp GTTCCTGCTGAAAGATTGCACAGTCTGAAGAGGCTGGAACAAAAATaGCCAGGAGAGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCT +
Preference number: 1 (lower is better)
Translates to: VPAERLHSLKRLEQK*PGERHSLVSREIVP
Trigger: AGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCTCTCCTGGTCATTTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 90 bp AGAAGCTTAAGATTCAAAGCTACCGAGAAGAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAAGAGGCTGGAACAAAAATGACCAGG +
Preference number: 1 (lower is better)
Translates to: RSLRFKATEKRGSSC*KIAQSEEAGTKMTR
Trigger: CCTGGTCATTTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCTCTTCTCGGTAGCTTTGAATCTTAAGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 90 bp ACATGGAAGCAGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTACTGGCCGTCACTGCGGGTCCGCAC +
Preference number: 2 (lower is better)
Translates to: TWKQHVQGPVSGATH*GVKSTLLAVTAGPH
Trigger: GTGCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCTGCTTCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SMSRARCPARHTWELSPLGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGGTGGGGAAGGAGGCTaGAAGGCCCAGGAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSGGEGG*KAQEAS
Trigger: GGAGGCTTCCTGGGCCTTCCAGCCTCCTTCCCCACC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTAC +
Preference number: 2 (lower is better)
Translates to: NTGSQARTHTHTHSARSETQRSL*GRPHCY
Trigger: GTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: SMSRARCPARHTWELSPLEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTC +
Preference number: 2 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCKQGRD*TWKQHV
Trigger: GACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGC +
Preference number: 2 (lower is better)
Translates to: NTGSQARTHTHTHSARSELSPLY*PSLRVR
Trigger: GCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGGGTTGTATCTGACTTaGGTCTGGACCCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GERDVGIRGCGALPRARSGLYLT*VWTQGS
Trigger: GCTGCCCTGGGTCCAGACTCAAGTCAGATACAACCC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTC +
Preference number: 2 (lower is better)
Translates to: NTGSQARTHTHTHSARSEKQGRD*TWKQHV
Trigger: GACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCACATGTAGGGCAGTaGTGGACCCAGAACCCCTCC +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSHVGQ*WTQNPS
Trigger: GGAGGGGTTCTGGGTCCATCACTGCCCTACATGTGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCCCTACTCTCCTGTaGTCCAGGGTCTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLPTLL*SRVSAA
Trigger: AGCAGCAGAGACCCTGGAGCACAGGAGAGTAGGGAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCCTACCCCCTTCAGTaGCTCTTCAGTGCTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSPYPLQ*LFSAAR
Trigger: TCTGGCAGCACTGAAGAGCCACTGAAGGGGGTAGGG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGCAGTAGTTGTCCCTaGGGAGTTCCCAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSSSSCP*GVPKRV
Trigger: AACCCTCTTGGGAACTCCTCAGGGACAACTACTGCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCRGSSC*KIAQSE
Trigger: TTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCAAGAAATGGCCCCTTTaGTCATGCCCTATCCCTACC +
Preference number: 2 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAKKWPL*SCPIPT
Trigger: GGTAGGGATAGGGCATGATCAAAGGGGCCATTTCTT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR CAA 90 bp TATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGGGCAGTGATGGACCCAGAACCCCTC +
Preference number: 2 (lower is better)
Translates to: YSWESAAFLSCWGLN*DIVTCRAVMDPEPL
Trigger: GAGGGGTTCTGGGTCCATCACTGCCCTACATGTGACTATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGCTGCTGACTCCCAGCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCCTCTCCCCAGCTACTaGGTTTCAGAAAAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHPLPSY*VSEKAG
Trigger: TCCAGCCTTTTCTGAAACTCAGTAGCTGGGGAGAGG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGCAGTAGTTGTCCCTaGGGAGTTCCCAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSSSCP*GVPKRV
Trigger: AACCCTCTTGGGAACTCCTCAGGGACAACTACTGCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTAC +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTQRSL*GRPHCY
Trigger: GTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 90 bp ATGACCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTaGTTCCCTTGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCA +
Preference number: 2 (lower is better)
Translates to: MTLSIHTEGMEQEPL*FPCLWSLKPVIPIP
Trigger: TGGGATAGGTATGACTGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: GERDVGIRGCGALPRARSNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTGGGAAAAATGGGAATaGAAACAGGTACTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCWEKWE*KQVLGE
Trigger: TTCCCCAAGTACCTGTTTTCATTCCCATTTTTCCCA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAATGGGATTAGGAAATaGTCCAGTTCTACCACTCTC +
Preference number: 2 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCNGIRK*SSSTTL
Trigger: GAGAGTGGTAGAACTGGATCATTTCCTAATCCCATT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTTACTGGCCGTCACTaGGGGTCCGCACACAGTACA +
Preference number: 2 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDFTGRH*GSAHST
Trigger: TGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTGGTGTTGATGGTGTaGTTTCTTCCTGTCAACCAG +
Preference number: 2 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSLVLMV*FLPVNQ
Trigger: CTGGTTGACAGGAAGAAACCACACCATCAACACCAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGGGTTGTATCTGACTTaGGTCTGGACCCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERGLYLT*VWTQGS
Trigger: GCTGCCCTGGGTCCAGACTCAAGTCAGATACAACCC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTAC +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCTQRSL*GRPHCY
Trigger: GTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAA +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRGSSC*KIAQSE
Trigger: TTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTAC +
Preference number: 2 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPARHT*ELSPLY
Trigger: GTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTAC +
Preference number: 2 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFPARHT*ELSPLY
Trigger: GTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGAAGGACCTCATCTCTaGACCTCTTACTTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFEGPHL*TSYLRS
Trigger: GCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATTTACTGGCCGTCACTaGGGGTCCGCACACAGTACA +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERFTGRH*GSAHST
Trigger: TGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATCAGTGGCTCTTCAGTaGTGCCAGAATACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSVALQ*CQNTRN
Trigger: ATTCCTTGTATTCTGGCAGCACTGAAGAGCCACTGA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACCCCGCCATATGAGTaGCTGGTCCCTAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTPPYE*LVPRER
Trigger: TCTTTCCCTAGGGACCAGGCACTCATATGGCGGGGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCAATGGAACATTTCTTaGATGCCTCAGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHQWNIS*MPQLSA
Trigger: AGCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGTACTTGGGGAAACTaGATGGATCCTATCAAACAA +
Preference number: 2 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGTWGN*MDPIKQ
Trigger: TTGTTTGATAGGATCCATTCAGTTTCCCCAAGTACC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATGGGAAAAATGGGAATaGAAACAGGTACTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSWEKWE*KQVLGE
Trigger: TTCCCCAAGTACCTGTTTTCATTCCCATTTTTCCCA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATTTAGAAATAGGCTATaGGGGAGAAGGGGCATAAAG +
Preference number: 2 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSFRNRL*GRRGIK
Trigger: CTTTATGCCCCTTCTCCCTCATAGCCTATTTCTAAA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCACAAAGCAGGAACCATaGAGATTTCACTCCCCCATC +
Preference number: 2 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFTKQEP*RFHSPI
Trigger: GATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACGCCATATGAGTGCCTaGTCCCTAGGGAAAGAGATG +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRHMSA*SLGKEM
Trigger: CATCTCTTTCCCTAGGGACCAGGCACTCATATGGCG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGC +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCLSPLY*PSLRVR
Trigger: GCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTTGTTCCCTTGCCTGTaGTCTCTTAAGCCAGTCATA +
Preference number: 2 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFLFPCL*SLKPVI
Trigger: TATGACTGGCTTAAGAGACCACAGGCAAGGGAACAA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTGGGAAAAATGGGAATaGAAACAGGTACTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFWEKWE*KQVLGE
Trigger: TTCCCCAAGTACCTGTTTTCATTCCCATTTTTCCCA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAATGGGATTAGGAAATaGTCCAGTTCTACCACTCTC +
Preference number: 2 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERNGIRK*SSSTTL
Trigger: GAGAGTGGTAGAACTGGATCATTTCCTAATCCCATT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATA +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCAFLSC*GLNLDI
Trigger: TATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 90 bp ACACAGTACAGAGTGTTTCTTGGTTTCACACATTCACTAGAACTATaGCTATTGTTAAATAACCCCAGAATGCTGGGGCACGTACAGGGG +
Preference number: 2 (lower is better)
Translates to: TQYRVFLGFTHSLEL*LLLNNPRMLGHVQG
Trigger: CCCCTGTACGTGCCCCAGCATTCTGGGGTTATTTAACAATAGCAATAGTTCTAGTGAATGTGTGAAACCAAGAAACACTCTGTACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCAGTGGCTCTTCAGTaGTGCCAGAATACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSVALQ*CQNTRN
Trigger: ATTCCTTGTATTCTGGCAGCACTGAAGAGCCACTGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCAATGGAACATTTCTTaGATGCCTCAGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCQWNIS*MPQLSA
Trigger: AGCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCAAATACTCTTGTCATaGAGAGAAAATCCACCTAGC +
Preference number: 2 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCQILLS*RENPPS
Trigger: GCTAGGTGGATTTTCTCTTCATGACAAGAGTATTTG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACTTGGGGAAACTGAATaGATCCTATCAAACAATACA +
Preference number: 2 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLGETE*ILSNNT
Trigger: TGTATTGTTTGATAGGATCCATTCAGTTTCCCCAAG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CCA 72 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTACTGGCCGTCACTGCGG +
Preference number: 3 (lower is better)
Translates to: SMSRARCPARHT*ELSPLYWPSLR
Trigger: CCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTGAGGCCGGCCCCATaGCTACCTGGCCTCCATCTT +
Preference number: 3 (lower is better)
Translates to: NTGSQARTHTHTHSARSELRPAP*LPGLHL
Trigger: AAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTGAGGCCGGCCCCATaGCTACCTGGCCTCCATCTT +
Preference number: 3 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALRPAP*LPGLHL
Trigger: AAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR CCA 72 bp CCGGCGCGACACACTTGGGAGTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGCACACAGTACAGAGTG +
Preference number: 3 (lower is better)
Translates to: PARHTWELSPLY*PSLRVRTQYRV
Trigger: CACTCTGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCRVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 72 bp TGGGAAAAGAAAGACAGCGAGAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTCCAGGGCCCGGTGTCC +
Preference number: 3 (lower is better)
Translates to: WEKKDSEKQGRD*TWKQHVQGPVS
Trigger: GGACACCGGGCCCTGGACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTTCTCGCTGTCTTTCTTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 72 bp TGGGGCCACATCTCACAAGGCAGGACCTGGATGCACTaGATCCCCCTTTGCTCCAGCAACTCAGCCAGACAT +
Preference number: 3 (lower is better)
Translates to: WGHISQGRTWMH*IPLCSSNSARH
Trigger: ATGTCTGGCTGAGTTGCTGGAGCAAAGGGGGATTCAGTGCATCCAGGTCCTGCCTTGTGAGATGTGGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 3 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: GERDVGIRGCGALPRARSRVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 3 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGAGAGAGACACAGCCTaGTCTCCAGAGAAATTGTTC +
Preference number: 3 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAERDTA*SPEKLF
Trigger: GAACAATTTCTCTGGAGACAAGGCTGTGTCTCTCTC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGTTCCTGCTGAAAGATaGCACAGTCTGAAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSVPAER*HSLKRL
Trigger: CAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAAC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 3 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSCWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR GCA 72 bp ACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTaGCTGTGGTCTCTTAAGCCAGTCATACCTATCCCA +
Preference number: 3 (lower is better)
Translates to: TEGMEQEPLLFP*LWSLKPVIPIP
Trigger: TGGGATAGGTATGACTGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR CCA 72 bp GGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATAGTCACATGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: GYSWESAAFLSC*GLNLDIVTCRA
Trigger: TGCCCTACATGTGACTATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CCA 72 bp GATGGTCCCATATTTGCTATGACAGGAACACAGAGGTaGCAGCTTAGGAAGCTGGGGCCACATCTCACAAGG +
Preference number: 3 (lower is better)
Translates to: DGPIFAMTGTQR*QLRKLGPHLTR
Trigger: CCTTGTGAGATGTGGCCCCAGCTTCCTAAGCTGCCACCTCTGTGTTCCTGTCATAGCAAATATGGGACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACTGAGGCCGGCCCCATaGCTACCTGGCCTCCATCTT +
Preference number: 3 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLRPAP*LPGLHL
Trigger: AAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 3 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSCWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCTCTGCACCTCTTACTaGAGGAGCAAGAGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLCTSY*RSKRRE
Trigger: TTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGAACACAGAAACTTGTaGGTGTTGATGGTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAEHRNL*VLMVWF
Trigger: AAACCACACCATCAACACCAACAAGTTTCTGTGTTC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR TCA 72 bp GGAAGTGGTAAGCTGGTGATGGTCCCATATTTGCTATaGCAGGAACACAGAGGTGGCAGCTTAGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GSGKLVMVPYLL*QEHRGGSLGSW
Trigger: CCAGCTTCCTAAGCTGCCACCTCTGTGTTCCTGTCATAGCAAATATGGGACCATCACCAGCTTACCACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAATGAAAACAGGTACTaGGGGAAACTGAATGGATCC +
Preference number: 3 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSNENRY*GKLNGS
Trigger: GGATCCATTCAGTTTCCCCAAGTACCTGTTTTCATT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CCA 72 bp AGATGGAGCTGGGAGAGGAACACAAAGCAGGAACCATaGAGATTTCACTCCCCCATCCACCTCACAATTTCA +
Preference number: 3 (lower is better)
Translates to: RWSWERNTKQEP*RFHSPIHLTIS
Trigger: TGAAATTGTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAATGAAAACAGGTACTaGGGGAAACTGAATGGATCC +
Preference number: 3 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSNENRY*GKLNGS
Trigger: GGATCCATTCAGTTTCCCCAAGTACCTGTTTTCATT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAATGAAAACAGGTACTaGGGGAAACTGAATGGATCC +
Preference number: 3 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHNENRY*GKLNGS
Trigger: GGATCCATTCAGTTTCCCCAAGTACCTGTTTTCATT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 72 bp TGGTGTCTTATCCGTGAGTGGGAAGTGGTAAGCTGGTaGTGGTCCCATATTTGCTATGACAGGAACACAGAG +
Preference number: 3 (lower is better)
Translates to: WCLIREWEVVSW*WSHICYDRNTE
Trigger: CTCTGTGTTCCTGTCATAGCAAATATGGGACCATCACCAGCTTACCACTTCCCACTCACGGATAAGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 3 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 3 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERCWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGTTCCTGCTGAAAGATaGCACAGTCTGAAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCVPAER*HSLKRL
Trigger: CAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAAC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR TCA 72 bp AGATTCAAAGCTACCGAGAAGAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAAGAGGCTGGAACAAAA +
Preference number: 3 (lower is better)
Translates to: RFKATEKRGSSC*KIAQSEEAGTK
Trigger: TTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCTCTTCTCGGTAGCTTTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGGTGGCTGCCCTTCTTaGTGCGCACCTCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLGGCPS*CAPLSA
Trigger: GGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCTGCAGGGGGCGGTGTaGGGGCAGCATTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLQGAV*GQHCRA
Trigger: TGCCCTGCAATGCTGCCCCCACACCGCCCCCTGCAG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGGGCGCCAGAACGGGTaGAGACGCCCGCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSGRQNG*RRPLGR
Trigger: CCTCCCCAGCGGGCGTCTCCACCCGTTCTGGCGCCC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549884.6
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCAGACCAGGGACTCGTaGGAAGTCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLQTRDS*EVRQGL
Trigger: CAGCCCCTGCCTGACTTCTCACGAGTCCCTGGTCTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTGGGGTGGCTGGGCCTaGAAAGGCTGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSWGGWA*KGWVRR
Trigger: CCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGAGGAGGCAAGCTGCTaGGGGGAGGGAGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCEEASC*GEGVGW
Trigger: CCAACCCACTCCCTCCCCTCAGCAGCTTGCCTCCTC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCCCGACCTCGCCAGGTaGTATCCTCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCPDLAR*YPPGSR
Trigger: CCGACTCCCAGGAGGATATCACCTGGCGAGGTCGGG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTGGTGTACCCTCCCCTaGGCAGCCGCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSWCTLP*AAAPAW
Trigger: CCATGCGGGAGCGGCTGCTCAGGGGAGGGTACACCA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTGCAGGGGGCGGTGTaGGGGCAGCATTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALQGAV*GQHCRA
Trigger: TGCCCTGCAATGCTGCCCCCACACCGCCCCCTGCAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGTCTCCCTCTCCGTTTaGGCTGTCCCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLVSLSV*AVPALW
Trigger: CCACAGGGCTGGGACAGCCCAAACGGAGAGGGAGAC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCACCGCTCGAGGGTCTaGCGCCAGACACGAATGCGA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLHRSRV*RQTRMR
Trigger: TCGCATTCGTGTCTGGCGCCAGACCCTCGAGCGGTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGTGGGGAAGGAGGCTaGAAGGCCCAGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGGEGG*KAQEAS
Trigger: GGAGGCTTCCTGGGCCTTCCAGCCTCCTTCCCCACC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 72 bp CAGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTACTGGCCGTCACTGCG +
Preference number: 4 (lower is better)
Translates to: QHVQGPVSGATH*GVKSTLLAVTA
Trigger: CGCAGTGACGGCCAGTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAGAGGGTTTCAGTCCTaGGGCAGCAGGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCRGFQS*GSRCRG
Trigger: CCCCCTGCACCTGCTGCCTCAGGACTGAAACCCTCT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCAGCCTTCAGCAGCCTaGCCAGCAGGTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLQPSAA*PAGLAP
Trigger: AGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGAAGAGGGCAGGGTTaGGTGACGCATGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLRRGQG*VTHGLP
Trigger: TGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAAAGATGGGGTCAGCTaGGGGCCGCAGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLKDGVS*GPQADF
Trigger: GAAGTCTGCCTGCGGCCCTCAGCTGACCCCATCTTT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCCGACCTCGCCAGGTaGTATCCTCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPDLAR*YPPGSR
Trigger: CCGACTCCCAGGAGGATATCACCTGGCGAGGTCGGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSSTTS*VGQRGS
Trigger: GGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGCCGCAAACTCCTCTaGGCTGGTGTACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSRKLL*AGVPSP
Trigger: AGGGGAGGGTACACCAGCTCAGAGGAGTTTGCGGCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGCCTTCTGCTGGGGTaGCTGGGCCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSLLLG*LGLKRL
Trigger: CAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGGCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGCCTGGGCTCAAAGATaGGGTCAGCTGAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCAWAQR*GQLRAA
Trigger: TGCGGCCCTCAGCTGACCCCATCTTTGAGCCCAGGC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLHNLMS*PEGLPQ
Trigger: CTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATGGGGTGGCTGGGCCTaGAAAGGCTGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSWGGWA*KGWVRR
Trigger: CCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGCCTGGGGCTGTTCTaGATCCTGACCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGLGLF*ILTPDR
Trigger: CCTGTCAGGGGTCAGGATTCAGAACAGCCCCAGGCC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGGCCTGGGGCTGTTCTaGATCCTGACCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEGLGLF*ILTPDR
Trigger: CCTGTCAGGGGTCAGGATTCAGAACAGCCCCAGGCC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGGGGGTGTAGGGCCTTaGGCATGGCATCCAACATCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLGGVGP*AWHPTS
Trigger: AGATGTTGGATGCCATGCTCAAGGCCCTACACCCCC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGGTGTACCCTCCCCTaGGCAGCCGCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHWCTLP*AAAPAW
Trigger: CCATGCGGGAGCGGCTGCTCAGGGGAGGGTACACCA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTGGTGTACCCTCCCCTaGGCAGCCGCTCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREWCTLP*AAAPAW
Trigger: CCATGCGGGAGCGGCTGCTCAGGGGAGGGTACACCA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCACATGTAGGGCAGTaGTGGACCCAGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSHVGQ*WTQNPS
Trigger: GGAGGGGTTCTGGGTCCATCACTGCCCTACATGTGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCCTGAAAAGGCTGGGTaGGCAGGCGGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAPEKAG*AGGHRG
Trigger: CCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTTGGTCCTCAGAAACTaGAGGGGGCGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALVLRN*RGRCGG
Trigger: GCCCCCACACCGCCCCCTGCAGTTTCTGAGGACCAA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCAAGCACACCTGGGCTaGGCTCCGGCACCGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREQAHLG*APAPLE
Trigger: CTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCAGGATGGATACCACTaGCTACCTCCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLQDGYH*LPPGRV
Trigger: CACCCTCCCAGGAGGTAGGCAGTGGTATCCATCCTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGACTCTGGGTACCGTTaGCCCAGAACTCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLDSGYR*PRTLGS
Trigger: GGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCCGGGCAGGAGAACTaGCAGTGGTGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPGQEN*QWCWSQ
Trigger: CTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTGCAGGGGGCGGTGTaGGGGCAGCATTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLQGAV*GQHCRA
Trigger: TGCCCTGCAATGCTGCCCCCACACCGCCCCCTGCAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRHKHT*AALRHR
Trigger: GCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERHKHT*AALRHR
Trigger: GCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGGTGGAGACGCCCGCTaGGGAGGGGGTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFGGDAR*GGGLGS
Trigger: GGACCCCAGACCCCCTCCCCAGCGGGCGTCTCCACC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTACAAGCGGTTCACATaGCCGCGCTCCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSYKRFT*PRSGRQ
Trigger: CTGGCGCCCGGAGCGCGGCCATGTGAACCGCTTGTA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGAGGGTTTCAGTCCTaGGGCAGCAGGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRGFQS*GSRCRG
Trigger: CCCCCTGCACCTGCTGCCTCAGGACTGAAACCCTCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGGGGTGATGGAGGTGTaGGGTGCTGGAGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSGVMEV*GAGGVG
Trigger: CCCCACTCCTCCAGCACCTCACACCTCCATCACCCC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTGCTGGGAGGACTGCTaGGGAAGCTGGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSECWEDC*GSWRDH
Trigger: GTGGTCTCTCCAGCTTCCTCAGCAGTCCTCCCAGCA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGTGGCTGCCCTTCTTaGTGCGCACCTCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGGCPS*CAPLSA
Trigger: GGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGAGGGCAGGGTTGAGTaGCGCATGGGCTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEEGRVE*RMGCHF
Trigger: AAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAGAAGAGGGCAGGGTTaGGTGACGCATGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSERRGQG*VTHGLP
Trigger: TGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGGCTGTTCTGAATCCTaGCCCCTGACAGGGGACTTA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLGCSES*PLTGDL
Trigger: TAAGTCCCCTGTCAGGGGTCAGGATTCAGAACAGCC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCTGGCTCTGACCCAGTaGCAAAGGGGAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLALTQ*QRGAFL
Trigger: CAAGAAGGCTCCCCTTTGTCACTGGGTCAGAGCCAG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAGGTCATGCTGGCTCTaGCCCAGTGACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCRSCWL*PSDKGE
Trigger: CTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGAGGAGGCAAGCTGCTaGGGGGAGGGAGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREEEASC*GEGVGW
Trigger: CCAACCCACTCCCTCCCCTCAGCAGCTTGCCTCCTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGAGGCAAGCTGCTaGGGGGAGGGAGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGREEASC*GEGVGW
Trigger: CCAACCCACTCCCTCCCCTCAGCAGCTTGCCTCCTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAAAGATGGGGTCAGCTaGGGGCCGCAGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEKDGVS*GPQADF
Trigger: GAAGTCTGCCTGCGGCCCTCAGCTGACCCCATCTTT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCCGACCTCGCCAGGTaGTATCCTCCTGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPDLAR*YPPGSR
Trigger: CCGACTCCCAGGAGGATATCACCTGGCGAGGTCGGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTGGTAGTTTTACGCTaGGGTGCCAGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLLVVLR*GASPSL
Trigger: CAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESSTTS*VGQRGS
Trigger: GGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGGTTGTATCTGACTTaGGTCTGGACCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGLYLT*VWTQGS
Trigger: GCTGCCCTGGGTCCAGACTCAAGTCAGATACAACCC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTTGGGGATGAAGGTTaGCGGCTGCCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALGDEG*RLPPRM
Trigger: CATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTTGGGGATGAAGGTTaGCGGCTGCCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELGDEG*RLPPRM
Trigger: CATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTATCATCTGCTGCCTCTaGCGTTCCTCCAAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCIICCL*RSSKRL
Trigger: GAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGAT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACAGGAGTCCCTCCTaGAGGACCCCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSHRSPS*RTPRLG
Trigger: GCCTAGCCTGGGGGTCCTGCAGGAGGGACTCCTGTG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCARIME*SLQQPD
Trigger: GTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGCGGCCAGGGACAGCTaGTATAGACTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLAARDS*YRLLFF
Trigger: GAAGAAGAGGAGTCTATAGCAGCTGTCCCTGGCCGC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCATCTCTTCGACCCCTaGGGCCAGGGACAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEHLFDP*GQGQLL
Trigger: TAGCAGCTGTCCCTGGCCGCAGGGGTCGAAGAGATG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGTGTGGGGGCAGCATTaGAGGGCATCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSVWGQH*RASGLR
Trigger: TCTCAGCCCAGATGCCCTGCAATGCTGCCCCCACAC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGTGTGGGGGCAGCATTaGAGGGCATCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEVWGQH*RASGLR
Trigger: TCTCAGCCCAGATGCCCTGCAATGCTGCCCCCACAC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESFTLR*QSLPAP
Trigger: CGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAAGCGGCGCATGATGTaGCCAGCCTTGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLKRRMM*PALPTS
Trigger: TGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCTCCCTACTCTCCTGTaGTCCAGGGTCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLPTLL*SRVSAA
Trigger: AGCAGCAGAGACCCTGGAGCACAGGAGAGTAGGGAG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCCCCAGGACCTACACTaGCCCTACCCCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSPQDLH*PYPLQW
Trigger: CCACTGAAGGGGGTAGGGGCAGTGTAGGTCCTGGGG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTGGGAGAGAAGGGGTaGGTCCTTGAGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALGEKG*VLEVAA
Trigger: GGCAGCAACCTCAAGGACCCACCCCTTCTCTCCCAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAGCCCCATGGGACTCTaGGTACCGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSPMGL*VPLAQN
Trigger: GTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGCTGCCTCATCAGGATaGATACCACTGCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLAASSG*IPLPTS
Trigger: GGAGGTAGGCAGTGGTATCCATCCTGATGAGGCAGC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCCACTCACTGGCTCTaGTGCCAGAGAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSTHWL*CQRVEG
Trigger: CCCTTCAACTCTCTGGCACCAGAGCCAGTGAGTGGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGCTGGGGAGGCTGTTaGAAAGGCAGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLACWGGC*KGSCWG
Trigger: TCCCCAGCAGCTGCCTTTCCAACAGCCTCCCCAGCA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAGCCTTCTGCTGGGGTaGCTGGGCCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSLLLG*LGLKRL
Trigger: CAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGGCT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGGGAGGGAGTGGGTTaGTCCTCAGAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGEGVG*SSETAG
Trigger: CCCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCCCTGTGGGACTCTGTaGCATTTCTCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCPCGTL*HFSRVS
Trigger: GGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTATGGACCTCTCCAGCTaGCCCAGGCACAAGCACACC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSMDLSS*PRHKHT
Trigger: GGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCAT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTACTTCTCCCAGGCAATaGACCTCTCCAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCTSPRQ*TSPAGP
Trigger: TGGGCCAGCTGGAGAGGTCCATTGCCTGGGAGAAGT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGAGTCGCCGCCGCTTaGAGGGGGAGAGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRVAAA*RGRALL
Trigger: AAGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGTGGGGAAGGAGGCTaGAAGGCCCAGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGGEGG*KAQEAS
Trigger: GGAGGCTTCCTGGGCCTTCCAGCCTCCTTCCCCACC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGGTGGGGAAGGAGGCTaGAAGGCCCAGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSGGEGG*KAQEAS
Trigger: GGAGGCTTCCTGGGCCTTCCAGCCTCCTTCCCCACC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCCCTACCCCCTTCAGTaGCTCTTCAGTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCPYPLQ*LFSAAR
Trigger: TCTGGCAGCACTGAAGAGCCACTGAAGGGGGTAGGG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACCACCACCAGCCAGGTaGGACAGGCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSPPPAR*DRLGCQ
Trigger: CTGACAGCCCAGCCTGTCCCACCTGGCTGGTGGTGG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549787.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGAGGGTTTCAGTCCTaGGGCAGCAGGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRGFQS*GSRCRG
Trigger: CCCCCTGCACCTGCTGCCTCAGGACTGAAACCCTCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCGGGATCTCCTCTGCTaGGAGCTGCACCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRDLLC*ELHPLQ
Trigger: TTGCAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCAGACCAGGGACTCGTaGGAAGTCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREQTRDS*EVRQGL
Trigger: CAGCCCCTGCCTGACTTCTCACGAGTCCCTGGTCTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCAGACCAGGGACTCGTaGGAAGTCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHQTRDS*EVRQGL
Trigger: CAGCCCCTGCCTGACTTCTCACGAGTCCCTGGTCTG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGCAGCGCAGGATCTCTaGCACATTGTCTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLAAQDL*HIVSCQ
Trigger: CTGACAAGAGACAATGTGTCAGAGATCCTGCGCTGC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCACTGGTCTCCTCCATaGTCCGAGAACTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSHWSPP*SENCAS
Trigger: GGAGGCGCAGTTCTCGGATCATGGAGGAGACCAGTG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGCTGTTCTGAATCCTaGCCCCTGACAGGGGACTTA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGCSES*PLTGDL
Trigger: TAAGTCCCCTGTCAGGGGTCAGGATTCAGAACAGCC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGCCTGGGGCTGTTCTaGATCCTGACCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGLGLF*ILTPDR
Trigger: CCTGTCAGGGGTCAGGATTCAGAACAGCCCCAGGCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAGGTCATGCTGGCTCTaGCCCAGTGACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSERSCWL*PSDKGE
Trigger: CTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGGGGGTGTAGGGCCTTaGGCATGGCATCCAACATCT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSGGVGP*AWHPTS
Trigger: AGATGTTGGATGCCATGCTCAAGGCCCTACACCCCC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGCTCCTCTACCCATTaGAGCACTGCTAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSSSTH*STARSV
Trigger: GACAGACCTAGCAGTGCTTCAATGGGTAGAGGAGCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGGAGATGCCACAAGGTaGCTCCCCACCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSGDATR*LPTSLA
Trigger: GGCAAGGGAGGTGGGGAGTCACCTTGTGGCATCTCC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGGTTGTATCTGACTTaGGTCTGGACCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGLYLT*VWTQGS
Trigger: GCTGCCCTGGGTCCAGACTCAAGTCAGATACAACCC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETQRSL*GRPHCY
Trigger: GTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTCACATGTAGGGCAGTaGTGGACCCAGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSHVGQ*WTQNPS
Trigger: GGAGGGGTTCTGGGTCCATCACTGCCCTACATGTGA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCTTCCAGCTCCAAGCTaGCTACCAAGCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLPAPS*LPSQCH
Trigger: ATGGCACTGGCTTGGTAGGCAGCTTGGAGCTGGAAG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTACTCACTGGCTCTGGTaGCAGAGAGTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCTHWLW*QRVEGL
Trigger: GAGCCCTTCAACTCTCTGGCACCAGAGCCAGTGAGT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCCTGAAAAGGCTGGGTaGGCAGGCGGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHPEKAG*AGGHRG
Trigger: CCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTGGTCCTCAGAAACTaGAGGGGGCGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLVLRN*RGRCGG
Trigger: GCCCCCACACCGCCCCCTGCAGTTTCTGAGGACCAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTTGGTCCTCAGAAACTaGAGGGGGCGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLVLRN*RGRCGG
Trigger: GCCCCCACACCGCCCCCTGCAGTTTCTGAGGACCAA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAFSRVS*SPLRGQ
Trigger: TTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCAAGCACACCTGGGCTaGGCTCCGGCACCGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFQAHLG*APAPLE
Trigger: CTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCCCCAGGACCTACACTaGCCCTACCCCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHPQDLH*PYPLQW
Trigger: CCACTGAAGGGGGTAGGGGCAGTGTAGGTCCTGGGG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTTGGCCCAGAACTCTTaGCTCCCAGCCCGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLAQNS*LPARRL
Trigger: TAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCCCCCTGCCATCGGTaGCTGCCCTTCTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSPCHR*LPFLMR
Trigger: GCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAAGTCAGGCAGGGGCTaGTGGTCAGTCAGACACATA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLKSGRG*WSVRHI
Trigger: TATGTGTCTGACTGACCACCAGCCCCTGCCTGACTT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCAGGAGAACTGGCAGTaGTGTTGGAGCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLQENWQ*CWSQLT
Trigger: AGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCCCGGGCAGGAGAACTaGCAGTGGTGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRPGQEN*QWCWSQ
Trigger: CTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGCTGAGGGGAGGGAGTaGGTTGGTCCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAAEGRE*VGPQKL
Trigger: CAGTTTCTGAGGACCAACCCACTCCCTCCCCTCAGC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGTCTCCCTCTCCGTTTaGGCTGTCCCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRVSLSV*AVPALW
Trigger: CCACAGGGCTGGGACAGCCCAAACGGAGAGGGAGAC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGTCTCCCTCTCCGTTTaGGCTGTCCCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSVSLSV*AVPALW
Trigger: CCACAGGGCTGGGACAGCCCAAACGGAGAGGGAGAC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCCTGGGCTCAAAGATaGGGTCAGCTGAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAWAQR*GQLRAA
Trigger: TGCGGCCCTCAGCTGACCCCATCTTTGAGCCCAGGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGCCTGGGCTCAAAGATaGGGTCAGCTGAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREAWAQR*GQLRAA
Trigger: TGCGGCCCTCAGCTGACCCCATCTTTGAGCCCAGGC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACACCGCTCGAGGGTCTaGCGCCAGACACGAATGCGA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSHRSRV*RQTRMR
Trigger: TCGCATTCGTGTCTGGCGCCAGACCCTCGAGCGGTG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCACCGCTCGAGGGTCTaGCGCCAGACACGAATGCGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREHRSRV*RQTRMR
Trigger: TCGCATTCGTGTCTGGCGCCAGACCCTCGAGCGGTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFRHKHT*AALRHR
Trigger: GCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCTTCTGGCCACGCTTTaGGAAACCAGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLLLATL*ETRLLS
Trigger: ACTCAGAAGCCTGGTTTCCCAAAGCGTGGCCAGAAG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGAGTCGCCGCCGCTTaGAGGGGGAGAGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRVAAA*RGRALL
Trigger: AAGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLRNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLSPLY*PSLRVR
Trigger: GCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTAC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLPARHT*ELSPLY
Trigger: GTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCCCTACCCCCTTCAGTaGCTCTTCAGTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAPYPLQ*LFSAAR
Trigger: TCTGGCAGCACTGAAGAGCCACTGAAGGGGGTAGGG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCCACACAGAGGGTATaGAACAGGAGCCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSTQRV*NRSPCC
Trigger: ACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGTTATGACTTGGGGATaGAGGTTGCCGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHVMTWG*RLPAAP
Trigger: GGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAAC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGTTATGACTTGGGGATaGAGGTTGCCGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRVMTWG*RLPAAP
Trigger: GGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAAC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATGCTGGGAGGACTGCTaGGGAAGCTGGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSCWEDC*GSWRDH
Trigger: GTGGTCTCTCCAGCTTCCTCAGCAGTCCTCCCAGCA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACGGGATCTCCTCTGCTaGGAGCTGCACCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSRDLLC*ELHPLQ
Trigger: TTGCAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGCCTTCAGCAGCCTaGCCAGCAGGTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSQPSAA*PAGLAP
Trigger: AGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCACTGGTCTCCTCCATaGTCCGAGAACTGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHHWSPP*SENCAS
Trigger: GGAGGCGCAGTTCTCGGATCATGGAGGAGACCAGTG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGAGGGCAGGGTTGAGTaGCGCATGGGCTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSEGRVE*RMGCHF
Trigger: AAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGAAGAGGGCAGGGTTaGGTGACGCATGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERRGQG*VTHGLP
Trigger: TGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGAAGAGGGCAGGGTTaGGTGACGCATGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRRGQG*VTHGLP
Trigger: TGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCATCAGGTGTGAGGACTaGGCTGCTCAACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAIRCED*AAQQGA
Trigger: AGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGAT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGCAGGGCATCTGGGCTaGGATGTTAAACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSAGHLG*DVKPEC
Trigger: GCACTCTGGTTTAACATCTCAGCCCAGATGCCCTGC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAAAGATGGGGTCAGCTaGGGGCCGCAGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSKDGVS*GPQADF
Trigger: GAAGTCTGCCTGCGGCCCTCAGCTGACCCCATCTTT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSSTTS*VGQRGS
Trigger: GGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGCCGCAAACTCCTCTaGGCTGGTGTACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSRKLL*AGVPSP
Trigger: AGGGGAGGGTACACCAGCTCAGAGGAGTTTGCGGCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCGAAGAAGCGGCGCATaGTGTGCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRRSGA*CAQPCL
Trigger: TAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGAAGAAGCGGCGCATaGTGTGCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERRSGA*CAQPCL
Trigger: TAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGAAGAAGCGGCGCATaGTGTGCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRRSGA*CAQPCL
Trigger: TAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGTCCCATATTTGCTATaGCAGGAACACAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLVPYLL*QEHRGG
Trigger: GCCACCTCTGTGTTCCTGTCATAGCAAATATGGGAC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTGGGGATGAAGGTTaGCGGCTGCCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLGDEG*RLPPRM
Trigger: CATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCTTCCAGCTCCAAGCTaGCTACCAAGCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSLPAPS*LPSQCH
Trigger: ATGGCACTGGCTTGGTAGGCAGCTTGGAGCTGGAAG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCATCATCTGCTGCCTCTaGCGTTCCTCCAAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSIICCL*RSSKRL
Trigger: GAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGAT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCACAGGAGTCCCTCCTaGAGGACCCCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDHRSPS*RTPRLG
Trigger: GCCTAGCCTGGGGGTCCTGCAGGAGGGACTCCTGTG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSARIME*SLQQPD
Trigger: GTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCATCTCTTCGACCCCTaGGGCCAGGGACAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHHLFDP*GQGQLL
Trigger: TAGCAGCTGTCCCTGGCCGCAGGGGTCGAAGAGATG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGTGTGGGGGCAGCATTaGAGGGCATCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREVWGQH*RASGLR
Trigger: TCTCAGCCCAGATGCCCTGCAATGCTGCCCCCACAC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGTGTGGGGGCAGCATTaGAGGGCATCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSVWGQH*RASGLR
Trigger: TCTCAGCCCAGATGCCCTGCAATGCTGCCCCCACAC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSFSRVS*SPLRGQ
Trigger: TTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSFTLR*QSLPAP
Trigger: CGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTTACTGGCCGTCACTaGGGGTCCGCACACAGTACA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSFTGRH*GSAHST
Trigger: TGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTACCCCGCCATATGAGTaGCTGGTCCCTAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSTPPYE*LVPRER
Trigger: TCTTTCCCTAGGGACCAGGCACTCATATGGCGGGGT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGACCCCGCCATATGAGTaGCTGGTCCCTAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSETPPYE*LVPRER
Trigger: TCTTTCCCTAGGGACCAGGCACTCATATGGCGGGGT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAAGGCAGGACCTGGATaGACTGAATCCCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCKAGPG*TESPFA
Trigger: AGCAAAGGGGGATTCAGTGCATCCAGGTCCTGCCTT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCAGGATGGATACCACTaGCTACCTCCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSQDGYH*LPPGRV
Trigger: CACCCTCCCAGGAGGTAGGCAGTGGTATCCATCCTG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGTCGTAGGCCACGCTaGGGTGATGGAGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSRRPR*GDGGVR
Trigger: CCTCACACCTCCATCACCCCAGCGTGGCCTACGACT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGTCGTAGGCCACGCTaGGGTGATGGAGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSRRPR*GDGGVR
Trigger: CCTCACACCTCCATCACCCCAGCGTGGCCTACGACT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCTGGGAGAGAAGGGGTaGGTCCTTGAGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLGEKG*VLEVAA
Trigger: GGCAGCAACCTCAAGGACCCACCCCTTCTCTCCCAG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGCCCCATGGGACTCTaGGTACCGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESPMGL*VPLAQN
Trigger: GTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGCCCCATGGGACTCTaGGTACCGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSPMGL*VPLAQN
Trigger: GTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGCTGCCTCATCAGGATaGATACCACTGCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAAASSG*IPLPTS
Trigger: GGAGGTAGGCAGTGGTATCCATCCTGATGAGGCAGC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTGGAAAGGCAGCTGCTaGGGAAGTTACGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSWKGSC*GSYGRG
Trigger: GCCTCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTGCTGGGGAGGCTGTTaGAAAGGCAGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRECWGGC*KGSCWG
Trigger: TCCCCAGCAGCTGCCTTTCCAACAGCCTCCCCAGCA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGCTGGGGAGGCTGTTaGAAAGGCAGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHCWGGC*KGSCWG
Trigger: TCCCCAGCAGCTGCCTTTCCAACAGCCTCCCCAGCA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTCCGCCACCCATGTTaGAGGGGAAGACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELRHPC*RGRRTS
Trigger: AGAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCCAAGCGCCTCTGTGTaGCCAGGGTCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAPSASV*PGSYLL
Trigger: AAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAAGTCAGGCAGGGGCTaGTGGTCAGTCAGACACATA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCKSGRG*WSVRHI
Trigger: TATGTGTCTGACTGACCACCAGCCCCTGCCTGACTT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTGAGAAGGCTCCACTaGGCAATGTCAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALRRLH*AMSDQG
Trigger: TCCCTGGTCTGACATTGCCCAGTGGAGCCTTCTCAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGCCTTCTGCTGGGGTaGCTGGGCCTGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSLLLG*LGLKRL
Trigger: CAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGGCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGACAGGAAGGCTGACTaGCTGAGGTCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSDRKAD*LRSCWL
Trigger: GAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGCATTGCAGGGCATCTaGGCTGAGATGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLALQGI*AEMLNQ
Trigger: CTGGTTTAACATCTCAGCCCAGATGCCCTGCAATGC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGGGAGGGAGTGGGTTaGTCCTCAGAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGEGVG*SSETAG
Trigger: CCCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGTCTATTCATTGGCTTaGAGGAGGCAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLVYSLA*RRQAAE
Trigger: CTCAGCAGCTTGCCTCCTCCAAGCCAATGAATAGAC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREHNLMS*PEGLPQ
Trigger: CTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRHNLMS*PEGLPQ
Trigger: CTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGATGGACCTCTCCAGCTaGCCCAGGCACAAGCACACC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRMDLSS*PRHKHT
Trigger: GGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCAT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAATGGACCTCTCCAGCTaGCCCAGGCACAAGCACACC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSMDLSS*PRHKHT
Trigger: GGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCAT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCAATACGTCTCCTCATaGCATCACCACTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLQYVSS*HHHYQK
Trigger: CTTCTGGTAGTGGTGATGTCATGAGGAGACGTATTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTGGCTCTGACCCAGTaGCAAAGGGGAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELALTQ*QRGAFL
Trigger: CAAGAAGGCTCCCCTTTGTCACTGGGTCAGAGCCAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGGTCATGCTGGCTCTaGCCCAGTGACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSRSCWL*PSDKGE
Trigger: CTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCAAGACAGGAAGGCTaGCTGGCTGAGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPRQEG*LAEVML
Trigger: CAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCCAAGACAGGAAGGCTaGCTGGCTGAGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRPRQEG*LAEVML
Trigger: CAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGGGAGCTATGGCTCTaGGTCTGGCTCAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRELWL*VWLSQD
Trigger: GTCTTGGCTGAGCCAGACTCAGAGCCATAGCTCCCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGGAGCTATGGCTCTaGGTCTGGCTCAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRELWL*VWLSQD
Trigger: GTCTTGGCTGAGCCAGACTCAGAGCCATAGCTCCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGGGAGCTATGGCTCTaGGTCTGGCTCAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERELWL*VWLSQD
Trigger: GTCTTGGCTGAGCCAGACTCAGAGCCATAGCTCCCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGACTGCTATCAGGTGTaGGGACTGAGCTGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLADCYQV*GLSCST
Trigger: TGTTGAGCAGCTCAGTCCTCACACCTGATAGCAGTC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTATCCACCACCAGCCTaGGCACATCTCAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHYPPPA*AHLRWD
Trigger: GTCCCACCTGAGATGTGCTCAGGCTGGTGGTGGATA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGGGGGTGTAGGGCCTTaGGCATGGCATCCAACATCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSGGVGP*AWHPTS
Trigger: AGATGTTGGATGCCATGCTCAAGGCCCTACACCCCC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCACGAATGCGAGGGGTaGTCTCATATGATATCTCTG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLHECEG*SHMISL
Trigger: CAGAGATATCATATGAGATCACCCCTCGCATTCGTG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGGTTGTATCTGACTTaGGTCTGGACCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGLYLT*VWTQGS
Trigger: GCTGCCCTGGGTCCAGACTCAAGTCAGATACAACCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCAGCAGTAGTTGTCCCTaGGGAGTTCCCAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLASSSCP*GVPKRV
Trigger: AACCCTCTTGGGAACTCCTCAGGGACAACTACTGCT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCACACAGCGCTCTCTCTaGGGCCGGCCCCATTGCTAC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFTQRSL*GRPHCY
Trigger: GTAGCAATGGGGCCGGCCTCAGAGAGAGCGCTGTGT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGGACCTGGATGCACTaGATCCCCCTTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRTWMH*IPLCSS
Trigger: GCTGGAGCAAAGGGGGATTCAGTGCATCCAGGTCCT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCCAGTGTATGCTTCCTaGGAACCACACAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSPVYAS*EPHSLN
Trigger: GTTCAGGCTGTGTGGTTCGCAGGAAGCATACACTGG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379441.7
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTGCCTACCAAGCCAGTaGCATTCTCTGCCACAACTG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSECLPSQ*HSLPQL
Trigger: CAGTTGTGGCAGAGAATGGCACTGGCTTGGTAGGCA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGGCCAGGGTCTTATCTaGTTTACAGGCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSGQGLI*FTGWLG
Trigger: GCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTACCTTGCCAAAGCTATaGAGGAACTCCACAATGGTC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLTLPKL*RNSTMV
Trigger: GACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCTGACCAGCAGGTCTTaGACCTCACCCAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLTSRS*TSPKLS
Trigger: TGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREARIME*SLQQPD
Trigger: GTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCTGAAAAGGCTGGGTaGGCAGGCGGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPEKAG*AGGHRG
Trigger: CCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTCTGGGATGCTAGATaGTGTGGCATCAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELWDAR*CGINLS
Trigger: GGAGAGGTTGATGCCACAGCATCTAGCATCCCAGAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAAAGGGGAGCCTTCTTaGTCCAGGAACCCCTTATGG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSKGEPS*SRNPLW
Trigger: CCATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGATGTTAAACCAGAGTaGTTGAGGATCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLDVKPE*LRIRAG
Trigger: TCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTTGGTCCTCAGAAACTaGAGGGGGCGGTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFLVLRN*RGRCGG
Trigger: GCCCCCACACCGCCCCCTGCAGTTTCTGAGGACCAA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREFSRVS*SPLRGQ
Trigger: TTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGACATGATAACCCGCTaGTCCAGCTCCTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSDMITR*SSSSTH
Trigger: ATGGGTAGAGGAGCTGGAGCAGCGGGTTATCATGTC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACAAGCACACCTGGGCTaGGCTCCGGCACCGCTCGAG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERQAHLG*APAPLE
Trigger: CTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGAAGGACCTCATCTCTaGACCTCTTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCEGPHL*TSYLRS
Trigger: GCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTCCCTACTCTCCTGTaGTCCAGGGTCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLPTLL*SRVSAA
Trigger: AGCAGCAGAGACCCTGGAGCACAGGAGAGTAGGGAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCCCAGGACCTACACTaGCCCTACCCCCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPQDLH*PYPLQW
Trigger: CCACTGAAGGGGGTAGGGGCAGTGTAGGTCCTGGGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAAGGCAGGACCTGGATaGACTGAATCCCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSKAGPG*TESPFA
Trigger: AGCAAAGGGGGATTCAGTGCATCCAGGTCCTGCCTT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLRKGWC*ILPNCE
Trigger: CTCACAGTTTGGGAGGATCCAACACCAACCTTTACG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGTTGCTGCCAGGATTaGCAGATGGGTACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGCCQD*QMGTVS
Trigger: ACTCACAGTACCCATCTGCCAATCCTGGCAGCAACC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTTGGCCCAGAACTCTTaGCTCCCAGCCCGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLAQNS*LPARRL
Trigger: TAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGACTCTGGGTACCGTTaGCCCAGAACTCTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREDSGYR*PRTLGS
Trigger: GGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGCTGCCTCATCAGGATaGATACCACTGCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSAASSG*IPLPTS
Trigger: GGAGGTAGGCAGTGGTATCCATCCTGATGAGGCAGC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTGCGGGACAAACTTCTaGAGAGATTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSECGTNF*RDFWGG
Trigger: GCCTCCCCAGAAATCTCTCCAGAAGTTTGTCCCGCA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGGAAAGGCAGCTGCTaGGGAAGTTACGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHWKGSC*GSYGRG
Trigger: GCCTCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGATTTTGACCTTAGGTaGCCGACCTCGACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLADFDLR*PTSTPF
Trigger: AAACGGGGTCGAGGTCGGCCACCTAAGGTCAAAATC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTTTACAGGCTGGCTTaGCTTTGGTCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELYRLA*LWSPPP
Trigger: AGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTATCTGCTTTACAGGCTaGCTTGGCTTTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCICFTG*LGFGHL
Trigger: GAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGAT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCCAAGCGCCTCTGTGTaGCCAGGGTCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSPSASV*PGSYLL
Trigger: AAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCCCGGGCAGGAGAACTaGCAGTGGTGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFPGQEN*QWCWSQ
Trigger: CTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGACAGGAAGGCTGACTaGCTGAGGTCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSDRKAD*LRSCWL
Trigger: GAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGACAGGAAGGCTGACTaGCTGAGGTCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREDRKAD*LRSCWL
Trigger: GAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACTGCAGGGGGCGGTGTaGGGGCAGCATTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLQGAV*GQHCRA
Trigger: TGCCCTGCAATGCTGCCCCCACACCGCCCCCTGCAG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGCTGAGGGGAGGGAGTaGGTTGGTCCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSAEGRE*VGPQKL
Trigger: CAGTTTCTGAGGACCAACCCACTCCCTCCCCTCAGC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGCTGAGGGGAGGGAGTaGGTTGGTCCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRAEGRE*VGPQKL
Trigger: CAGTTTCTGAGGACCAACCCACTCCCTCCCCTCAGC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGCTGAGGGGAGGGAGTaGGTTGGTCCTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHAEGRE*VGPQKL
Trigger: CAGTTTCTGAGGACCAACCCACTCCCTCCCCTCAGC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACCCAGCCAAGGGCGTaGAAGAGAACTGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETQPRA*KRTALE
Trigger: CTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCCCTGTGGGACTCTGTaGCATTTCTCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRPCGTL*HFSRVS
Trigger: GGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCCTGTGGGACTCTGTaGCATTTCTCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPCGTL*HFSRVS
Trigger: GGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTTCACGGGTAGAGTCTaGGCTAGGACATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSFTGRV*ARTCPA
Trigger: GGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRHKHT*AALRHR
Trigger: GCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACTTCTCCCAGGCAATaGACCTCTCCAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETSPRQ*TSPAGP
Trigger: TGGGCCAGCTGGAGAGGTCCATTGCCTGGGAGAAGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTTCTGGCCACGCTTTaGGAAACCAGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELLATL*ETRLLS
Trigger: ACTCAGAAGCCTGGTTTCCCAAAGCGTGGCCAGAAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSERNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCGGCGCGACACACTTaGGAGTTAAGTCCACTTTAC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPARHT*ELSPLY
Trigger: GTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCCTACCCCCTTCAGTaGCTCTTCAGTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPYPLQ*LFSAAR
Trigger: TCTGGCAGCACTGAAGAGCCACTGAAGGGGGTAGGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTACAAAGCAGGAACCATaGAGATTTCACTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLTKQEP*RFHSPI
Trigger: GATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGAGTGTCTTCCAGTTaGTCAGGAAGATGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGVSSS*SGRCEG
Trigger: TCCTTCACATCTTCCTGATCAACTGGAAGACACTCC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGGTGGCTGCCCTTCTTaGTGCGCACCTCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERGGCPS*CAPLSA
Trigger: GGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLPVIA*ILDGIS
Trigger: GGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGCTGTTCTGAATCCTaGCCCCTGACAGGGGACTTA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGCSES*PLTGDL
Trigger: TAAGTCCCCTGTCAGGGGTCAGGATTCAGAACAGCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGCTGTTCTGAATCCTaGCCCCTGACAGGGGACTTA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGCSES*PLTGDL
Trigger: TAAGTCCCCTGTCAGGGGTCAGGATTCAGAACAGCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGATCAGGTGTGAGGACTaGGCTGCTCAACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREIRCED*AAQQGA
Trigger: AGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGAT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGCAGGGCATCTGGGCTaGGATGTTAAACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRAGHLG*DVKPEC
Trigger: GCACTCTGGTTTAACATCTCAGCCCAGATGCCCTGC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCAGGGCATCTGGGCTaGGATGTTAAACCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAGHLG*DVKPEC
Trigger: GCACTCTGGTTTAACATCTCAGCCCAGATGCCCTGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAAGATGGGGTCAGCTaGGGGCCGCAGGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKDGVS*GPQADF
Trigger: GAAGTCTGCCTGCGGCCCTCAGCTGACCCCATCTTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGCTCCTCTACCCATTaGAGCACTGCTAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSSSSTH*STARSV
Trigger: GACAGACCTAGCAGTGCTTCAATGGGTAGAGGAGCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTGGTAGTTTTACGCTaGGGTGCCAGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLVVLR*GASPSL
Trigger: CAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTTGGTAGTTTTACGCTaGGGTGCCAGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLVVLR*GASPSL
Trigger: CAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSSTTS*VGQRGS
Trigger: GGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAGCCGCAAACTCCTCTaGGCTGGTGTACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFSRKLL*AGVPSP
Trigger: AGGGGAGGGTACACCAGCTCAGAGGAGTTTGCGGCT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCCTCTCCCCAGCTACTaGGTTTCAGAAAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSPLPSY*VSEKAG
Trigger: TCCAGCCTTTTCTGAAACTCAGTAGCTGGGGAGAGG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGTCCCATATTTGCTATaGCAGGAACACAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSVPYLL*QEHRGG
Trigger: GCCACCTCTGTGTTCCTGTCATAGCAAATATGGGAC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTCAAACTTTTCCCTTaGTGGGGGAAGTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLFKLFP*WGKFMG
Trigger: TCCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCATCTCCTTTTCTGCTaGCTCATCAGGATGGATACC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCHLLFC*LIRMDT
Trigger: GGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTTCCAGCTCCAAGCTaGCTACCAAGCCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLPAPS*LPSQCH
Trigger: ATGGCACTGGCTTGGTAGGCAGCTTGGAGCTGGAAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACTCACTGGCTCTGGTaGCAGAGAGTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETHWLW*QRVEGL
Trigger: GAGCCCTTCAACTCTCTGGCACCAGAGCCAGTGAGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTGTTTGACTATCATCTaGCAGGAGACTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLCLTII*QETEGS
Trigger: ACTGCCTTCAGTCTCCTGGCAGATGATAGTCAAACA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTGTTGGAAAGGCAGCTaGTGGGGAAGTTACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSCWKGS*WGSYGR
Trigger: TCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCAACA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGACTGAAGCTGAAGTaGTCTCGGCGGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGLKLK*SRRTLC
Trigger: ACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGACTGAAGCTGAAGTaGTCTCGGCGGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGLKLK*SRRTLC
Trigger: ACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGAGAGCTGCACCCACTaGAAGCCCTCTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFESCTH*KPSGVS
Trigger: AGACACGCCAGAGGGCTTGCAGTGGGTGCAGCTCTC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCGTTTGCCAGTAATTaGCTGAATCCTCGACGGGAT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPFASN*LNPRRD
Trigger: ATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGCCAGGGTCTTATCTaGTTTACAGGCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGQGLI*FTGWLG
Trigger: GCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGCCAGGGTCTTATCTaGTTTACAGGCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGQGLI*FTGWLG
Trigger: GCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCAAAGCCCAGCACCTTaGCAAAGCTATGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEQSPAP*QSYAGT
Trigger: AGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACACAGGAGTCCCTCCTaGAGGACCCCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERHRSPS*RTPRLG
Trigger: GCCTAGCCTGGGGGTCCTGCAGGAGGGACTCCTGTG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGACCAGCAGGTCTTaGACCTCACCCAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLTSRS*TSPKLS
Trigger: TGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGAGCCATTGAGCTCATaGACAAGGAAGGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSEPLSS*TRKART
Trigger: TGTCCTGGCCTTCCTTGTGCATGAGCTCAATGGCTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCGGCCAGGGACAGCTaGTATAGACTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAARDS*YRLLFF
Trigger: GAAGAAGAGGAGTCTATAGCAGCTGTCCCTGGCCGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCATCTCTTCGACCCCTaGGGCCAGGGACAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDHLFDP*GQGQLL
Trigger: TAGCAGCTGTCCCTGGCCGCAGGGGTCGAAGAGATG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGATGTTAAACCAGAGTaGTTGAGGATCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCDVKPE*LRIRAG
Trigger: TCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGCAGGCAGACTTCCTaGAAGAAGTCCCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERRQTS*KKSLCL
Trigger: CAAGCACAGGGACTTCTTGCAGGAAGTCTGCCTGCG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACGCAGGCAGACTTCCTaGAAGAAGTCCCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSRRQTS*KKSLCL
Trigger: CAAGCACAGGGACTTCTTGCAGGAAGTCTGCCTGCG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACAAGCACACCTGGGCTaGGCTCCGGCACCGCTCGAG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKQAHLG*APAPLE
Trigger: CTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAAGCGGCGCATGATGTaGCCAGCCTTGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREKRRMM*PALPTS
Trigger: TGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACTCCCCACCTCCCTTaGCTCACAGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTPHLP*LTDWPV
Trigger: AACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACTCCCCACCTCCCTTaGCTCACAGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETPHLP*LTDWPV
Trigger: AACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACTCCCCACCTCCCTTaGCTCACAGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTPHLP*LTDWPV
Trigger: AACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATTTACTGGCCGTCACTaGGGGTCCGCACACAGTACA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSFTGRH*GSAHST
Trigger: TGTACTGTGTGCGGACCCGCAGTGACGGCCAGTAAA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCACACAGCCTGAACTaGTGTAGGGTGATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSPHSLN*CRVMSL
Trigger: CAGGGACATCACCCTACAGCAGTTCAGGCTGTGTGG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACATTTCCATGTCAGGCTaGCACAGCTCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHISMSG*HSSRLG
Trigger: TCCCAGCCTGGAGCTGTGCCAGCCTGACATGGAAAT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATTGGCCCAGAACTCTTaGCTCCCAGCCCGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLAQNS*LPARRL
Trigger: TAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTAAACAGCTCACTGTaGGGTCAGGGACCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLNSSL*GQGPGL
Trigger: CAGTCCTGGTCCCTGACCCCACAGTGAGCTGTTTAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGTCTTCACTGAGGATTaGAGTGTCTTCCAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLVFTED*SVFQLI
Trigger: GATCAACTGGAAGACACTCCAATCCTCAGTGAAGAC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCCACTCACTGGCTCTaGTGCCAGAGAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSTHWL*CQRVEG
Trigger: CCCTTCAACTCTCTGGCACCAGAGCCAGTGAGTGGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLKTNFF*GSNTSP
Trigger: AGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCTCCGCCACCCATGTTaGAGGGGAAGACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLRHPC*RGRRTS
Trigger: AGAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCCACTGCAAGCCCTCTaGCGTGTCTCTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAPLQAL*RVSFFK
Trigger: TTTGAAGAAAGAGACACGCCAGAGGGCTTGCAGTGG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCACTGCAAGCCCTCTaGCGTGTCTCTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPLQAL*RVSFFK
Trigger: TTTGAAGAAAGAGACACGCCAGAGGGCTTGCAGTGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATCAGGCAGGGGCTGGTaGTCAGTCAGACACATATCC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSGRGW*SVRHIS
Trigger: GGATATGTGTCTGACTGACCACCAGCCCCTGCCTGA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCTGAGAAGGCTCCACTaGGCAATGTCAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLRRLH*AMSDQG
Trigger: TCCCTGGTCTGACATTGCCCAGTGGAGCCTTCTCAG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCGGTCACAGAGGGCTaGCTCTACTCCATATGCCAT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAVTEG*LYSICH
Trigger: ATGGCATATGGAGTAGAGCCAGCCCTCTGTGACCGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGCGGTCACAGAGGGCTaGCTCTACTCCATATGCCAT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRAVTEG*LYSICH
Trigger: ATGGCATATGGAGTAGAGCCAGCCCTCTGTGACCGC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACCGCCCAGTTCGCTTaGCCAGAACAGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETAQFA*PEQFSA
Trigger: GGCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAACCGCCCAGTTCGCTTaGCCAGAACAGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSTAQFA*PEQFSA
Trigger: GGCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACCGCCCAGTTCGCTTaGCCAGAACAGTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTAQFA*PEQFSA
Trigger: GGCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGGGTTGAGTGACGCATaGGCTGCCACTTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSGLSDA*AATFKE
Trigger: CTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCAACTGGCAGTGGTGTTaGAGCCAGCTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLANWQWC*SQLTPS
Trigger: AGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCTTGAGGATCAGGGCTaGATTCTGCCTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLEDQG*ILPHQA
Trigger: AGCCTGATGAGGCAGAATCCAGCCCTGATCCTCAAG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGCATTGCAGGGCATCTaGGCTGAGATGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSALQGI*AEMLNQ
Trigger: CTGGTTTAACATCTCAGCCCAGATGCCCTGCAATGC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGGCAGGTAGTTGCCTaGGCTCAAAGATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERQVVA*AQRWGQ
Trigger: CTGACCCCATCTTTGAGCCCAGGCAACTACCTGCCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGGCAGGTAGTTGCCTaGGCTCAAAGATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRQVVA*AQRWGQ
Trigger: CTGACCCCATCTTTGAGCCCAGGCAACTACCTGCCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTCACGGGTAGAGTCTaGGCTAGGACATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSFTGRV*ARTCPA
Trigger: GGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTCACGGGTAGAGTCTaGGCTAGGACATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHFTGRV*ARTCPA
Trigger: GGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCAGGTGATATCCTCCTaGGAGTCGGAGAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREQVISS*ESERCS
Trigger: TGAGCACCTCTCCGACTCCCAGGAGGATATCACCTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCAGGTGATATCCTCCTaGGAGTCGGAGAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRQVISS*ESERCS
Trigger: TGAGCACCTCTCCGACTCCCAGGAGGATATCACCTG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCAGGTGATATCCTCCTaGGAGTCGGAGAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHQVISS*ESERCS
Trigger: TGAGCACCTCTCCGACTCCCAGGAGGATATCACCTG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDHNLMS*PEGLPQ
Trigger: CTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGGACAGCCTCCATCTTaGGACGATGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSGQPPS*DDGSKC
Trigger: ACATTTACTGCCATCGTCCCAAGATGGAGGCTGTCC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAATGTGAGATCACTGTaGTGGTTCCGCATAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLNVRSL*WFRIES
Trigger: ACTCTCTATGCGGAACCACCACAGTGATCTCACATT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELSPLY*PSLRVR
Trigger: GCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGCCCATGGCTATAGCTaGGAGTCAGCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREAHGYS*ESAAFL
Trigger: GAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTGGTGTTGATGGTGTaGTTTCTTCCTGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLLVLMV*FLPVNQ
Trigger: CTGGTTGACAGGAAGAAACCACACCATCAACACCAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACAGGAACACAGAGGTaGCAGCTTAGGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTGTQR*QLRKLG
Trigger: CCCCAGCTTCCTAAGCTGCCACCTCTGTGTTCCTGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACAGGAACACAGAGGTaGCAGCTTAGGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTGTQR*QLRKLG
Trigger: CCCCAGCTTCCTAAGCTGCCACCTCTGTGTTCCTGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGGGTGATGGAGGTGTaGGGTGCTGGAGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGVMEV*GAGGVG
Trigger: CCCCACTCCTCCAGCACCTCACACCTCCATCACCCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGCAGATGGGTACTGTaGGTAGTTCCAGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGRWVL*VVPETV
Trigger: GACTGTCTCTGGAACTACTCACAGTACCCATCTGCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGCAGATGGGTACTGTaGGTAGTTCCAGAGACAGTC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGRWVL*VVPETV
Trigger: GACTGTCTCTGGAACTACTCACAGTACCCATCTGCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGAGTGTCTTCCAGTTaGTCAGGAAGATGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGVSSS*SGRCEG
Trigger: TCCTTCACATCTTCCTGATCAACTGGAAGACACTCC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGGAGTGTCTTCCAGTTaGTCAGGAAGATGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEGVSSS*SGRCEG
Trigger: TCCTTCACATCTTCCTGATCAACTGGAAGACACTCC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTTTTGGGGATGTCACTaGAGCCGTCAACGGGACTTC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRFWGCH*SRQRDF
Trigger: GAAGTCCCGTTGACGGCTTCAGTGACATCCCCAAAA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTTTGGGGATGTCACTaGAGCCGTCAACGGGACTTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSFWGCH*SRQRDF
Trigger: GAAGTCCCGTTGACGGCTTCAGTGACATCCCCAAAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTTTGGGGATGTCACTaGAGCCGTCAACGGGACTTC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHFWGCH*SRQRDF
Trigger: GAAGTCCCGTTGACGGCTTCAGTGACATCCCCAAAA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTTTCTAGAAAGCTGCTaGCATCCTTATTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCFLESC*HPYLLG
Trigger: CCCCAGCAAATAAGGATGTCAGCAGCTTTCTAGAAA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGCAGCGCAGGATCTCTaGCACATTGTCTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSAAQDL*HIVSCQ
Trigger: CTGACAAGAGACAATGTGTCAGAGATCCTGCGCTGC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTGGGGTGGCTGGGCCTaGAAAGGCTGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCWGGWA*KGWVRR
Trigger: CCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAAAGCTGACGCTTGCTaGGTTTTTCTATCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEKADAC*VFLSGA
Trigger: AGCGCCAGATAGAAAAACTCAGCAAGCGTCAGCTTT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTGCGAAAGAAAAGCTaGCGCTTGCTGAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLLRKKS*RLLSFS
Trigger: AGAAAAACTCAGCAAGCGTCAGCTTTTCTTTCGCAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAGCATCTGGGATGAGTaGAGCAGCTTTTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSIWDE*SSFLRK
Trigger: CTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAGCATCTGGGATGAGTaGAGCAGCTTTTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESIWDE*SSFLRK
Trigger: CTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPKHLG*VKQLFA
Trigger: CGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGACTGCTATCAGGTGTaGGGACTGAGCTGCTCAACA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSDCYQV*GLSCST
Trigger: TGTTGAGCAGCTCAGTCCTCACACCTGATAGCAGTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGACTGCTATCAGGTGTaGGGACTGAGCTGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRDCYQV*GLSCST
Trigger: TGTTGAGCAGCTCAGTCCTCACACCTGATAGCAGTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGAGGAGGCAAGCTGCTaGGGGGAGGGAGTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKEEASC*GEGVGW
Trigger: CCAACCCACTCCCTCCCCTCAGCAGCTTGCCTCCTC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGCTCCTCTACCCATTaGAGCACTGCTAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSSSTH*STARSV
Trigger: GACAGACCTAGCAGTGCTTCAATGGGTAGAGGAGCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCACGAATGCGAGGGGTaGTCTCATATGATATCTCTG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSHECEG*SHMISL
Trigger: CAGAGATATCATATGAGATCACCCCTCGCATTCGTG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCAGAGTCATCCTCGTTaGAAGTCTGGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEQSHPR*KSGSCQ
Trigger: TTGACAACTGCCAGACTTTCAACGAGGATGACTCTG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCTGCACCTCTTACTTaGGGAGCAAGAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSAPLT*GARGGK
Trigger: CTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHKQGRD*TWKQHV
Trigger: GACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSKQGRD*TWKQHV
Trigger: GACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGCAGTAGTTGTCCCTaGGGAGTTCCCAAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESSSCP*GVPKRV
Trigger: AACCCTCTTGGGAACTCCTCAGGGACAACTACTGCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCACATGTAGGGCAGTaGTGGACCCAGAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSHVGQ*WTQNPS
Trigger: GGAGGGGTTCTGGGTCCATCACTGCCCTACATGTGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGAAGTGGTAAGCTGGTaGTGGTCCCATATTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCEVVSW*WSHICY
Trigger: ATAGCAAATATGGGACCATCACCAGCTTACCACTTC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGCCTACCAAGCCAGTaGCATTCTCTGCCACAACTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHCLPSQ*HSLPQL
Trigger: CAGTTGTGGCAGAGAATGGCACTGGCTTGGTAGGCA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATGCCTACCAAGCCAGTaGCATTCTCTGCCACAACTG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSCLPSQ*HSLPQL
Trigger: CAGTTGTGGCAGAGAATGGCACTGGCTTGGTAGGCA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTCAAAGCTGTTATCTTaGAGGACAGACTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESKLLS*RTDSPR
Trigger: CCTAGGGGAGTCTGTCCTGCAAGATAACAGCTTTGA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGACAACTGTAGAAGCTaGGGGACAAACTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLADNCRS*GTNFWR
Trigger: TCTCCAGAAGTTTGTCCCGCAGCTTCTACAGTTGTC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGCTGACATCCTTATTTaGTGGGGAGGCTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEADILI*WGGCWK
Trigger: TTTCCAACAGCCTCCCCAGCAAATAAGGATGTCAGC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATATCATCTGCTGCCTCTaGCGTTCCTCCAAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDIICCL*RSSKRL
Trigger: GAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGAT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATCCAAGATCATCTGCTaGCTCTGCCGTTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSKIIC*LCRSSK
Trigger: CTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGGA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCAAAGCCCAGCACCTTaGCAAAGCTATGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSQSPAP*QSYAGT
Trigger: AGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTGGCTCTACTCCATATaGCATAAGGAAGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSWLYSI*HKEAAQ
Trigger: CTGCGCTGCTTCCTTATGGCATATGGAGTAGAGCCA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGAGCCATTGAGCTCATaGACAAGGAAGGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREEPLSS*TRKART
Trigger: TGTCCTGGCCTTCCTTGTGCATGAGCTCAATGGCTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTCTGGGATGCTAGATaGTGTGGCATCAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELWDAR*CGINLS
Trigger: GGAGAGGTTGATGCCACAGCATCTAGCATCCCAGAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTCTGGGATGCTAGATaGTGTGGCATCAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLWDAR*CGINLS
Trigger: GGAGAGGTTGATGCCACAGCATCTAGCATCCCAGAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACAGGGGACTTAAGATaGCTAGGTTGCATAGACCCG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSTGDLR*LGCIDP
Trigger: CGGGTCTATGCAACCTAGGCATCTTAAGTCCCCTGT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAAAGGGGAGCCTTCTTaGTCCAGGAACCCCTTATGG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRKGEPS*SRNPLW
Trigger: CCATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAAAGGGGAGCCTTCTTaGTCCAGGAACCCCTTATGG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSKGEPS*SRNPLW
Trigger: CCATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGVEEN*TGEQGL
Trigger: CAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGVEEN*TGEQGL
Trigger: CAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDFSRVS*SPLRGQ
Trigger: TTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGACATGATAACCCGCTaGTCCAGCTCCTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRDMITR*SSSSTH
Trigger: ATGGGTAGAGGAGCTGGAGCAGCGGGTTATCATGTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGACATGATAACCCGCTaGTCCAGCTCCTCTACCCAT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREDMITR*SSSSTH
Trigger: ATGGGTAGAGGAGCTGGAGCAGCGGGTTATCATGTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGAGGATGTGGGGCACTaGCAAGGGCAAGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHEDVGH*QGQGQK
Trigger: TTTTTGACCTTGCCCTTGGCAGTGCCCCACATCCTC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGAAGGACCTCATCTCTaGACCTCTTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSEGPHL*TSYLRS
Trigger: GCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCTCCCTACTCTCCTGTaGTCCAGGGTCTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLPTLL*SRVSAA
Trigger: AGCAGCAGAGACCCTGGAGCACAGGAGAGTAGGGAG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGTGGCTCTTCAGTGCTaGCAGAATACAAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSVALQC*QNTRNA
Trigger: AGCATTCCTTGTATTCTGGCAGCACTGAAGAGCCAC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTACCTCCTGGGAGGGTaGAAAGGTTTGAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEYLLGG*KGLNAR
Trigger: TCTAGCATTCAAACCTTTGCACCCTCCCAGGAGGTA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGCTCCTCACTGTCCTTaGGCCTCCACTTCACGTAAA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHAPHCP*ASTSRK
Trigger: TTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGCTCCTCACTGTCCTTaGGCCTCCACTTCACGTAAA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREAPHCP*ASTSRK
Trigger: TTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCAAACTTTTCCCTTGCTaGGGGAAGTTCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAKLFPC*GKFMGD
Trigger: GTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCCCCCTGCCATCGGTaGCTGCCCTTCTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSPCHR*LPFLMR
Trigger: GCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCCACTGCAAGCCCTCTaGCGTGTCTCTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSPLQAL*RVSFFK
Trigger: TTTGAAGAAAGAGACACGCCAGAGGGCTTGCAGTGG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGCAGGAACTCCACAATaGTCAAGCAGTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSAGTPQ*SSSLRR
Trigger: CCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCCCAGGCATTCCTCTaGCCCTTCCATCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSQAFL*PFHLYF
Trigger: GAAGTAGAGATGGAAGGGCCAGAGGAATGCCTGGGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGGTTGAGTGACGCATaGGCTGCCACTTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGLSDA*AATFKE
Trigger: CTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGGTTGAGTGACGCATaGGCTGCCACTTTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGLSDA*AATFKE
Trigger: CTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCAGGAGAACTGGCAGTaGTGTTGGAGCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRQENWQ*CWSQLT
Trigger: AGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACAGGAGAACTGGCAGTaGTGTTGGAGCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSQENWQ*CWSQLT
Trigger: AGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGACAGGAAGGCTGACTaGCTGAGGTCATGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFDRKAD*LRSCWL
Trigger: GAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTTGAGGATCAGGGCTaGATTCTGCCTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELEDQG*ILPHQA
Trigger: AGCCTGATGAGGCAGAATCCAGCCCTGATCCTCAAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTACTAGGTCTATTCATTaGCTTGGAGGAGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSTRSIH*LGGGKL
Trigger: CAGCTTGCCTCCTCCAAGCCAATGAATAGACCTAGT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCACCCAGCCAAGGGCGTaGAAGAGAACTGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFTQPRA*KRTALE
Trigger: CTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATACTTCTCCCAGGCAATaGACCTCTCCAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDTSPRQ*TSPAGP
Trigger: TGGGCCAGCTGGAGAGGTCCATTGCCTGGGAGAAGT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGGACAGCCTCCATCTTaGGACGATGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSGQPPS*DDGSKC
Trigger: ACATTTACTGCCATCGTCCCAAGATGGAGGCTGTCC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTTCTGGCCACGCTTTaGGAAACCAGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLLATL*ETRLLS
Trigger: ACTCAGAAGCCTGGTTTCCCAAAGCGTGGCCAGAAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGTGAGATCACTGTGGTaGTTCCGCATAGAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRVRSLW*FRIESR
Trigger: GCGACTCTCTATGCGGAACCACCACAGTGATCTCAC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGGAATAAGAGGATGTaGGGCACTGCCAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSRNKRM*GTAKGK
Trigger: CTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGCCATATGAGTGCCTaGTCCCTAGGGAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRHMSA*SLGKEM
Trigger: CATCTCTTTCCCTAGGGACCAGGCACTCATATGGCG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGCCATATGAGTGCCTaGTCCCTAGGGAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERHMSA*SLGKEM
Trigger: CATCTCTTTCCCTAGGGACCAGGCACTCATATGGCG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCGCCATATGAGTGCCTaGTCCCTAGGGAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHRHMSA*SLGKEM
Trigger: CATCTCTTTCCCTAGGGACCAGGCACTCATATGGCG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATCCACACAGAGGGTATaGAACAGGAGCCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSTQRV*NRSPCC
Trigger: ACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGGCAGCTTAGGAAGCTaGGGCCACATCTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFGSLGS*GHISQG
Trigger: GCCTTGTGAGATGTGGCCCCAGCTTCCTAAGCTGCC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
3UTR CAA 72 bp GAGTCAGCAGCTTTCCTCTCGTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGGGCAGTGATGGACCCA +
Preference number: 4 (lower is better)
Translates to: ESAAFLSCWGLN*DIVTCRAVMDP
Trigger: TGGGTCCATCACTGCCCTACATGTGACTATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGCTGCTGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 72 bp TCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTaGTTCCCTTGCCTGTGGTCTCTTAAGCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: SIHTEGMEQEPL*FPCLWSLKPVI
Trigger: TATGACTGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCCAGAGAGTCTTCACTaGGGATTGGAGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHPESLH*GLECLP
Trigger: TGGAAGACACTCCAATCCTCAGTGAAGACTCTCTGG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGCAAAGATAGAGGTTaGTGTTTGACTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGKDRG*CLTIIC
Trigger: GCAGATGATAGTCAAACATCAACCTCTATCTTTGCC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACGGGATCTCCTCTGCTaGGAGCTGCACCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRDLLC*ELHPLQ
Trigger: TTGCAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCATCAGGTGTGAGGACTaGGCTGCTCAACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFIRCED*AAQQGA
Trigger: AGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGAT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSLLRCL*SAFSRI
Trigger: TATCCGGGAGAAGGCACTTCACAAACACCTTAACAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGACATGTCACTTTGTTaGCAGACTTCTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSDMSLC*QTSPRQ
Trigger: TTGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRENQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGGTACTTGGGGAAACTaGATGGATCCTATCAAACAA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCGTWGN*MDPIKQ
Trigger: TTGTTTGATAGGATCCATTCAGTTTCCCCAAGTACC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAAGAAATGGCCCCTTTaGTCATGCCCTATCCCTACC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREKKWPL*SCPIPT
Trigger: GGTAGGGATAGGGCATGATCAAAGGGGCCATTTCTT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTGGTGTCTTATCCGTaGGTGGGAAGTGGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLVSYP*VGSGKL
Trigger: CAGCTTACCACTTCCCACTCACGGATAAGACACCAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGAGGGTGCAAAGGTTTaGATGCTAGATCCCAACATA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEEGAKV*MLDPNI
Trigger: TATGTTGGGATCTAGCATTCAAACCTTTGCACCCTC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCATCTTCAGTTCTGGCTaGTCTTCTTCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSIFSSG*SSSSSK
Trigger: CTTGGAGCTGGAAGAAGAGCAGCCAGAACTGAAGAT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTGTTTGACTATCATCTaGCAGGAGACTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSCLTII*QETEGS
Trigger: ACTGCCTTCAGTCTCCTGGCAGATGATAGTCAAACA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGACTGAAGCTGAAGTaGTCTCGGCGGACACTGTGT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGLKLK*SRRTLC
Trigger: ACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACCGTTTGCCAGTAATTaGCTGAATCCTCGACGGGAT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSPFASN*LNPRRD
Trigger: ATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCCTCCAAGATCATCTaGTGCCTCTGCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSSKII*CLCRSS
Trigger: GGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGCGGCCAGGGACAGCTaGTATAGACTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDAARDS*YRLLFF
Trigger: GAAGAAGAGGAGTCTATAGCAGCTGTCCCTGGCCGC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACAGGGGACTTAAGATaGCTAGGTTGCATAGACCCG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTGDLR*LGCIDP
Trigger: CGGGTCTATGCAACCTAGGCATCTTAAGTCCCCTGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACAGGGGACTTAAGATaGCTAGGTTGCATAGACCCG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETGDLR*LGCIDP
Trigger: CGGGTCTATGCAACCTAGGCATCTTAAGTCCCCTGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAAGGTGTTTGTGAAGTaGCTTCTCCCGGATACCTCG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREKVFVK*LLPDTS
Trigger: CGAGGTATCCGGGAGAAGGCACTTCACAAACACCTT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAAGGTGTTTGTGAAGTaGCTTCTCCCGGATACCTCG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHKVFVK*LLPDTS
Trigger: CGAGGTATCCGGGAGAAGGCACTTCACAAACACCTT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSFTLR*QSLPAP
Trigger: CGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAGCGGCGCATGATGTaGCCAGCCTTGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKRRMM*PALPTS
Trigger: TGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAAGGACCTCATCTCTaGACCTCTTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGREGPHL*TSYLRS
Trigger: GCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATATTTCCATGTCAGGCTaGCACAGCTCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDISMSG*HSSRLG
Trigger: TCCCAGCCTGGAGCTGTGCCAGCCTGACATGGAAAT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACTGGGAGAGAAGGGGTaGGTCCTTGAGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLGEKG*VLEVAA
Trigger: GGCAGCAACCTCAAGGACCCACCCCTTCTCTCCCAG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAGGACTGAGACCTCTTaGTGTAACGATTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSRTETS*CNDSTE
Trigger: TTCTGTGGAATCGTTACACCAAGAGGTCTCAGTCCT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGTCTTCACTGAGGATTaGAGTGTCTTCCAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSVFTED*SVFQLI
Trigger: GATCAACTGGAAGACACTCCAATCCTCAGTGAAGAC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGACATCCTTATTTGCTaGGGAGGCTGTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSDILIC*GGCWKG
Trigger: GCCTTTCCAACAGCCTCCCCAGCAAATAAGGATGTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTCTGCTTTAAGCTCTTaGTCTCTTGTTTCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLSALSS*SLVSAY
Trigger: ATAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCTGAGAAGGCTCCACTaGGCAATGTCAGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLRRLH*AMSDQG
Trigger: TCCCTGGTCTGACATTGCCCAGTGGAGCCTTCTCAG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCAGGAACTCCACAATaGTCAAGCAGTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAGTPQ*SSSLRR
Trigger: CCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGAAAGCCAGGATCATaGAGTGCAGCCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGKPGS*SAAFSS
Trigger: GCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTGTTTTTCCTGTAGCTaGACATACTCTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCCFSCS*TYSPES
Trigger: AGACTCTGGAGAGTATGTCCAGCTACAGGAAAAACA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAACTGGCAGTGGTGTTaGAGCCAGCTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSNWQWC*SQLTPS
Trigger: AGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAACTGGCAGTGGTGTTaGAGCCAGCTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSNWQWC*SQLTPS
Trigger: AGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCATTGCAGGGCATCTaGGCTGAGATGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSALQGI*AEMLNQ
Trigger: CTGGTTTAACATCTCAGCCCAGATGCCCTGCAATGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGCATTGCAGGGCATCTaGGCTGAGATGTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHALQGI*AEMLNQ
Trigger: CTGGTTTAACATCTCAGCCCAGATGCCCTGCAATGC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGTCTATTCATTGGCTTaGAGGAGGCAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREVYSLA*RRQAAE
Trigger: CTCAGCAGCTTGCCTCCTCCAAGCCAATGAATAGAC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGTCTATTCATTGGCTTaGAGGAGGCAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSVYSLA*RRQAAE
Trigger: CTCAGCAGCTTGCCTCCTCCAAGCCAATGAATAGAC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGCCTGGGCTCAAAGATaGGGTCAGCTGAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKAWAQR*GQLRAA
Trigger: TGCGGCCCTCAGCTGACCCCATCTTTGAGCCCAGGC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAGGCAGGTAGTTGCCTaGGCTCAAAGATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRQVVA*AQRWGQ
Trigger: CTGACCCCATCTTTGAGCCCAGGCAACTACCTGCCT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGGACAGCCTCCATCTTaGGACGATGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSGQPPS*DDGSKC
Trigger: ACATTTACTGCCATCGTCCCAAGATGGAGGCTGTCC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGACAGCCTCCATCTTaGGACGATGGCAGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGQPPS*DDGSKC
Trigger: ACATTTACTGCCATCGTCCCAAGATGGAGGCTGTCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTCCTCGTTGAAAGTCTaGCAGTTGTCAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESSLKV*QLSNTR
Trigger: CCTGGTATTTGACAACTGCCAGACTTTCAACGAGGA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTAAGTCCACTTTACTaGCCGTCACTGCGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLSPLY*PSLRVR
Trigger: GCGGACCCGCAGTGACGGCCAGTAAAGTGGACTTAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSAFLSC*GLNLDI
Trigger: TATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGCCCATGGCTATAGCTaGGAGTCAGCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDAHGYS*ESAAFL
Trigger: GAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGCCCATGGCTATAGCTaGGAGTCAGCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFAHGYS*ESAAFL
Trigger: GAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTTGTTCCCTTGCCTGTaGTCTCTTAAGCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALFPCL*SLKPVI
Trigger: TATGACTGGCTTAAGAGACCACAGGCAAGGGAACAA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGTTATGACTTGGGGATaGAGGTTGCCGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKVMTWG*RLPAAP
Trigger: GGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAAC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATGCTGGGAGGACTGCTaGGGAAGCTGGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKCWEDC*GSWRDH
Trigger: GTGGTCTCTCCAGCTTCCTCAGCAGTCCTCCCAGCA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLPVIA*ILDGIS
Trigger: GGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAAAGCTGACGCTTGCTaGGTTTTTCTATCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRKADAC*VFLSGA
Trigger: AGCGCCAGATAGAAAAACTCAGCAAGCGTCAGCTTT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAAAGCTGACGCTTGCTaGGTTTTTCTATCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSKADAC*VFLSGA
Trigger: AGCGCCAGATAGAAAAACTCAGCAAGCGTCAGCTTT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGCATCTGGGATGAGTaGAGCAGCTTTTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSIWDE*SSFLRK
Trigger: CTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPKHLG*VKQLFA
Trigger: CGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCAAGACAGGAAGGCTaGCTGGCTGAGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPRQEG*LAEVML
Trigger: CAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELNQSA*GSGLDS
Trigger: AGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLNQSA*GSGLDS
Trigger: AGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATATCCACCACCAGCCTaGGCACATCTCAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERYPPPA*AHLRWD
Trigger: GTCCCACCTGAGATGTGCTCAGGCTGGTGGTGGATA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLLRCL*SAFSRI
Trigger: TATCCGGGAGAAGGCACTTCACAAACACCTTAACAA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLIIPS*KAGSCL
Trigger: CAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLIIPS*KAGSCL
Trigger: CAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAGCTCCTCTACCCATTaGAGCACTGCTAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFSSSTH*STARSV
Trigger: GACAGACCTAGCAGTGCTTCAATGGGTAGAGGAGCT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACACGAATGCGAGGGGTaGTCTCATATGATATCTCTG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSHECEG*SHMISL
Trigger: CAGAGATATCATATGAGATCACCCCTCGCATTCGTG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGACATGTCACTTTGTTaGCAGACTTCTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRDMSLC*QTSPRQ
Trigger: TTGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGACATGTCACTTTGTTaGCAGACTTCTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSDMSLC*QTSPRQ
Trigger: TTGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACAGAGTCATCCTCGTTaGAAGTCTGGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSQSHPR*KSGSCQ
Trigger: TTGACAACTGCCAGACTTTCAACGAGGATGACTCTG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCAGAGTCATCCTCGTTaGAAGTCTGGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRQSHPR*KSGSCQ
Trigger: TTGACAACTGCCAGACTTTCAACGAGGATGACTCTG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAGCAGGGAAGGGACTaGACATGGAAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKQGRD*TWKQHV
Trigger: GACATGCTGCTTCCATGTTCAGTCCCTTCCCTGCTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGGTACTTGGGGAAACTaGATGGATCCTATCAAACAA +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSGTWGN*MDPIKQ
Trigger: TTGTTTGATAGGATCCATTCAGTTTCCCCAAGTACC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAAAGATTGCACAGTCTaGAGAGGCTGGAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCKDCTV*RGWNKN
Trigger: ATTTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRGSSC*KIAQSE
Trigger: TTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAATGGGATTAGGAAATaGTCCAGTTCTACCACTCTC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSENGIRK*SSSTTL
Trigger: GAGAGTGGTAGAACTGGATCATTTCCTAATCCCATT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTTAGAAATAGGCTATaGGGGAGAAGGGGCATAAAG +
Preference number: 4 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSFRNRL*GRRGIK
Trigger: CTTTATGCCCCTTCTCCCTCATAGCCTATTTCTAAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCAGTGTATGCTTCCTaGGAACCACACAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPVYAS*EPHSLN
Trigger: GTTCAGGCTGTGTGGTTCGCAGGAAGCATACACTGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR GCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGTTAAAATGGTCGTTTaGCTCCATTTCCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEVKMVV*LHFHVR
Trigger: CCTGACATGGAAATGGAGGCAAACGACCATTTTAAC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCATCTCCTTTTCTGCTaGCTCATCAGGATGGATACC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHHLLFC*LIRMDT
Trigger: GGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACATCTTCAGTTCTGGCTaGTCTTCTTCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHIFSSG*SSSSSK
Trigger: CTTGGAGCTGGAAGAAGAGCAGCCAGAACTGAAGAT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAATCTTCAGTTCTGGCTaGTCTTCTTCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSIFSSG*SSSSSK
Trigger: CTTGGAGCTGGAAGAAGAGCAGCCAGAACTGAAGAT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTGTTTGACTATCATCTaGCAGGAGACTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSCLTII*QETEGS
Trigger: ACTGCCTTCAGTCTCCTGGCAGATGATAGTCAAACA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCAAAGCTGTTATCTTaGAGGACAGACTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESKLLS*RTDSPR
Trigger: CCTAGGGGAGTCTGTCCTGCAAGATAACAGCTTTGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGACAACTGTAGAAGCTaGGGGACAAACTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREDNCRS*GTNFWR
Trigger: TCTCCAGAAGTTTGTCCCGCAGCTTCTACAGTTGTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGACAACTGTAGAAGCTaGGGGACAAACTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHDNCRS*GTNFWR
Trigger: TCTCCAGAAGTTTGTCCCGCAGCTTCTACAGTTGTC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTGTTGGAAAGGCAGCTaGTGGGGAAGTTACGGGAGA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDCWKGS*WGSYGR
Trigger: TCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCAACA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGCTGACATCCTTATTTaGTGGGGAGGCTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHADILI*WGGCWK
Trigger: TTTCCAACAGCCTCCCCAGCAAATAAGGATGTCAGC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGAGAGCTGCACCCACTaGAAGCCCTCTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKESCTH*KPSGVS
Trigger: AGACACGCCAGAGGGCTTGCAGTGGGTGCAGCTCTC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTTCTTAGCTTCCTTCTaGTTTAAGCTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCFLASF*FKLLVS
Trigger: AGAGACCAAGAGCTTAAAGCAGAAGGAAGCTAAGAA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTCCAAGATCATCTGCTaGCTCTGCCGTTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFSKIIC*LCRSSK
Trigger: CTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGGA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGATGTTAAACCAGAGTaGTTGAGGATCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRDVKPE*LRIRAG
Trigger: TCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGATGTTAAACCAGAGTaGTTGAGGATCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREDVKPE*LRIRAG
Trigger: TCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFGVEEN*TGEQGL
Trigger: CAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGVEEN*TGEQGL
Trigger: CAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKSFTLR*QSLPAP
Trigger: CGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGTGGCTCTTCAGTGCTaGCAGAATACAAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREVALQC*QNTRNA
Trigger: AGCATTCCTTGTATTCTGGCAGCACTGAAGAGCCAC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERKGWC*ILPNCE
Trigger: CTCACAGTTTGGGAGGATCCAACACCAACCTTTACG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAAACTTTTCCCTTGCTaGGGGAAGTTCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREKLFPC*GKFMGD
Trigger: GTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACACATCTTCAGTTCTaGCTGCTCTTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTHLQF*LLFFQL
Trigger: GAGCTGGAAGAAGAGCAGCCAGAACTGAAGATGTGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTGCGGGACAAACTTCTaGAGAGATTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDCGTNF*RDFWGG
Trigger: GCCTCCCCAGAAATCTCTCCAGAAGTTTGTCCCGCA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSKTNFF*GSNTSP
Trigger: AGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCCCCCTGCCATCGGTaGCTGCCCTTCTTGATGCGC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSPCHR*LPFLMR
Trigger: GCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGTACTTGATCACTTCTaGAAATTGCTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLVLDHF*KLLHPL
Trigger: AAGAGGATGAAGCAATTTCCAGAAGTGATCAAGTAC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGATTTTGACCTTAGGTaGCCGACCTCGACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDDFDLR*PTSTPF
Trigger: AAACGGGGTCGAGGTCGGCCACCTAAGGTCAAAATC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCTTTACAGGCTGGCTTaGCTTTGGTCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFLYRLA*LWSPPP
Trigger: AGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCATTGTCTCTTGTCAGTaGGATCTCAGACACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSIVSCQ*DLRHLL
Trigger: GAGAAGGTGTCTGAGATCCCACTGACAAGAGACAAT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTTTTTCCTGTAGCTaGACATACTCTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLACFSCS*TYSPES
Trigger: AGACTCTGGAGAGTATGTCCAGCTACAGGAAAAACA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCCCAGGCATTCCTCTaGCCCTTCCATCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSQAFL*PFHLYF
Trigger: GAAGTAGAGATGGAAGGGCCAGAGGAATGCCTGGGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTGAGTTTTTCTATCTaGCGCTCTAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLSFSI*RSSSGM
Trigger: CATCCCAGAGCTAGAGCGCCAGATAGAAAAACTCAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACTGAGTTTTTCTATCTaGCGCTCTAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLSFSI*RSSSGM
Trigger: CATCCCAGAGCTAGAGCGCCAGATAGAAAAACTCAG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTGAGTTTTTCTATCTaGCGCTCTAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELSFSI*RSSSGM
Trigger: CATCCCAGAGCTAGAGCGCCAGATAGAAAAACTCAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGGGAGGGAGTGGGTTaGTCCTCAGAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGEGVG*SSETAG
Trigger: CCCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACTAGGTCTATTCATTaGCTTGGAGGAGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTRSIH*LGGGKL
Trigger: CAGCTTGCCTCCTCCAAGCCAATGAATAGACCTAGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACTAGGTCTATTCATTaGCTTGGAGGAGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTRSIH*LGGGKL
Trigger: CAGCTTGCCTCCTCCAAGCCAATGAATAGACCTAGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCTTCTGGCCACGCTTTaGGAAACCAGGCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLLATL*ETRLLS
Trigger: ACTCAGAAGCCTGGTTTCCCAAAGCGTGGCCAGAAG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAGAGTCGCCGCCGCTTaGAGGGGGAGAGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCRVAAA*RGRALL
Trigger: AAGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGTGAGATCACTGTGGTaGTTCCGCATAGAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFVRSLW*FRIESR
Trigger: GCGACTCTCTATGCGGAACCACCACAGTGATCTCAC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGTGAGATCACTGTGGTaGTTCCGCATAGAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDVRSLW*FRIESR
Trigger: GCGACTCTCTATGCGGAACCACCACAGTGATCTCAC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCTCCTCGTTGAAAGTCTaGCAGTTGTCAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSSSLKV*QLSNTR
Trigger: CCTGGTATTTGACAACTGCCAGACTTTCAACGAGGA...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSAFLSC*GLNLDI
Trigger: TATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAACAAAGCAGGAACCATaGAGATTTCACTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSTKQEP*RFHSPI
Trigger: GATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCCAGTAAAGTTAAAATaGTCGTTTGCCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SMSRARCPARHTWELSPLPVKLK*SFASIS
Trigger: AGAAATGGAGGCAAACGACCATTTTAACTTTACTGG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549884.6
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCAGAGAGTCTTCACTaGGGATTGGAGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPESLH*GLECLP
Trigger: TGGAAGACACTCCAATCCTCAGTGAAGACTCTCTGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCCAGAGAGTCTTCACTaGGGATTGGAGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFPESLH*GLECLP
Trigger: TGGAAGACACTCCAATCCTCAGTGAAGACTCTCTGG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCAGCCTTCAGCAGCCTaGCCAGCAGGTCTTGCACCT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCQPSAA*PAGLAP
Trigger: AGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGAGGGCAGGGTTGAGTaGCGCATGGGCTGCCACTTT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCEGRVE*RMGCHF
Trigger: AAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACTGGCTCTGACCCAGTaGCAAAGGGGAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLALTQ*QRGAFL
Trigger: CAAGAAGGCTCCCCTTTGTCACTGGGTCAGAGCCAG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAGGTCATGCTGGCTCTaGCCCAGTGACAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKRSCWL*PSDKGE
Trigger: CTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLLRCL*SAFSRI
Trigger: TATCCGGGAGAAGGCACTTCACAAACACCTTAACAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCGAAGAAGCGGCGCATaGTGTGCCCAGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCRRSGA*CAQPCL
Trigger: TAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAATCAGGGTTGTATCTaGCTTGAGTCTGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFNQGCI*LESGPR
Trigger: CCTGGGTCCAGACTCAAGTCAGATACAACCCTGATT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCAAATACTCTTGTCATaGAGAGAAAATCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEQILLS*RENPPS
Trigger: GCTAGGTGGATTTTCTCTTCATGACAAGAGTATTTG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAGGACCTGGATGCACTaGATCCCCCTTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKRTWMH*IPLCSS
Trigger: GCTGGAGCAAAGGGGGATTCAGTGCATCCAGGTCCT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGTGCAAAGGTTTaGATGCTAGATCCCAACATA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGREGAKV*MLDPNI
Trigger: TATGTTGGGATCTAGCATTCAAACCTTTGCACCCTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGTCATCTCCTTTTCTaGTGCCTCATCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESHLLF*CLIRMD
Trigger: ATCCATCCTGATGAGGCAGCAGAAAAGGAGATGACT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGTCATCTCCTTTTCTaGTGCCTCATCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSHLLF*CLIRMD
Trigger: ATCCATCCTGATGAGGCAGCAGAAAAGGAGATGACT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCATCACTTCTGGAAATTaGTTCATCCTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSITSGN*FILFPQ
Trigger: CTGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGAT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGAGAGCTGCACCCACTaGAAGCCCTCTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCESCTH*KPSGVS
Trigger: AGACACGCCAGAGGGCTTGCAGTGGGTGCAGCTCTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCCGTTTGCCAGTAATTaGCTGAATCCTCGACGGGAT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDPFASN*LNPRRD
Trigger: ATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCCTCCAAGATCATCTaGTGCCTCTGCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSSKII*CLCRSS
Trigger: GGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCAAAGCCCAGCACCTTaGCAAAGCTATGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFQSPAP*QSYAGT
Trigger: AGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACTGACCAGCAGGTCTTaGACCTCACCCAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLTSRS*TSPKLS
Trigger: TGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTTAAGATGCCTAGGTTaGATAGACCCGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELRCLG*IDPGLV
Trigger: AACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATTAAGATGCCTAGGTTaGATAGACCCGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLRCLG*IDPGLV
Trigger: AACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATACAGGGGACTTAAGATaGCTAGGTTGCATAGACCCG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDTGDLR*LGCIDP
Trigger: CGGGTCTATGCAACCTAGGCATCTTAAGTCCCCTGT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAGGTGTTTGTGAAGTaGCTTCTCCCGGATACCTCG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKVFVK*LLPDTS
Trigger: CGAGGTATCCGGGAGAAGGCACTTCACAAACACCTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACTCCCCACCTCCCTTaGCTCACAGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTPHLP*LTDWPV
Trigger: AACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATCAGTGGCTCTTCAGTaGTGCCAGAATACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSVALQ*CQNTRN
Trigger: ATTCCTTGTATTCTGGCAGCACTGAAGAGCCACTGA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCAGTGGCTCTTCAGTaGTGCCAGAATACAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSVALQ*CQNTRN
Trigger: ATTCCTTGTATTCTGGCAGCACTGAAGAGCCACTGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACTTCACGTAAAGGTTaGTGTTGGATCCTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETSRKG*CWILPN
Trigger: GTTTGGGAGGATCCAACACCAACCTTTACGTGAAGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGACTGAGACCTCTTaGTGTAACGATTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRTETS*CNDSTE
Trigger: TTCTGTGGAATCGTTACACCAAGAGGTCTCAGTCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGTCTTCACTGAGGATTaGAGTGTCTTCCAGTTGATC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSVFTED*SVFQLI
Trigger: GATCAACTGGAAGACACTCCAATCCTCAGTGAAGAC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCCACTCACTGGCTCTaGTGCCAGAGAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSTHWL*CQRVEG
Trigger: CCCTTCAACTCTCTGGCACCAGAGCCAGTGAGTGGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGACATCCTTATTTGCTaGGGAGGCTGTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDDILIC*GGCWKG
Trigger: GCCTTTCCAACAGCCTCCCCAGCAAATAAGGATGTC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTCTGCTTTAAGCTCTTaGTCTCTTGTTTCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSESALSS*SLVSAY
Trigger: ATAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCAGGCAGGGGCTGGTaGTCAGTCAGACACATATCC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSGRGW*SVRHIS
Trigger: GGATATGTGTCTGACTGACCACCAGCCCCTGCCTGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAATTGTCTCTTGTCAGTaGGATCTCAGACACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSIVSCQ*DLRHLL
Trigger: GAGAAGGTGTCTGAGATCCCACTGACAAGAGACAAT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAACTGGCAGTGGTGTTaGAGCCAGCTAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDNWQWC*SQLTPS
Trigger: AGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGTCTATTCATTGGCTTaGAGGAGGCAAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDVYSLA*RRQAAE
Trigger: CTCAGCAGCTTGCCTCCTCCAAGCCAATGAATAGAC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTATGGACCTCTCCAGCTaGCCCAGGCACAAGCACACC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCMDLSS*PRHKHT
Trigger: GGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCAT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAATGTGAGATCACTGTaGTGGTTCCGCATAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSNVRSL*WFRIES
Trigger: ACTCTCTATGCGGAACCACCACAGTGATCTCACATT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCCTCGTTGAAAGTCTaGCAGTTGTCAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSSLKV*QLSNTR
Trigger: CCTGGTATTTGACAACTGCCAGACTTTCAACGAGGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCCTCGTTGAAAGTCTaGCAGTTGTCAAATACCAGG +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESSLKV*QLSNTR
Trigger: CCTGGTATTTGACAACTGCCAGACTTTCAACGAGGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGCAGCTTAGGAAGCTaGGGCCACATCTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGSLGS*GHISQG
Trigger: GCCTTGTGAGATGTGGCCCCAGCTTCCTAAGCTGCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACCTGAAGTAGTAGTGTaGGATACAGTAGATAAGCCA +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSPEVVV*DTVDKP
Trigger: TGGCTTATCTACTGTATCTCACACTACTACTTCAGG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGATCATACAGTTCTTGTaGATCAAAGTTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEIIQFL*IKVKPH
Trigger: ATGGGGCTTAACTTTGATTCACAAGAACTGTATGAT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGATAGAGGTTGATGTTTaGCTATCATCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRIEVDV*LSSARR
Trigger: TCTCCTGGCAGATGATAGTCAAACATCAACCTCTAT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGATAGAGGTTGATGTTTaGCTATCATCTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREIEVDV*LSSARR
Trigger: TCTCCTGGCAGATGATAGTCAAACATCAACCTCTAT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGGGAAGTCTGAAGATTaGGTTTCCATTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSGKSED*VSISSC
Trigger: ACAGGAAGAAATGGAAACTCAATCTTCAGACTTCCC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLPVIA*ILDGIS
Trigger: GGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGCAGCGCAGGATCTCTaGCACATTGTCTCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERAAQDL*HIVSCQ
Trigger: CTGACAAGAGACAATGTGTCAGAGATCCTGCGCTGC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTGCGAAAGAAAAGCTaGCGCTTGCTGAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSLRKKS*RLLSFS
Trigger: AGAAAAACTCAGCAAGCGTCAGCTTTTCTTTCGCAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPKHLG*VKQLFA
Trigger: CGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFLNQSA*GSGLDS
Trigger: AGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFLIIPS*KAGSCL
Trigger: CAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAG...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCACGAATGCGAGGGGTaGTCTCATATGATATCTCTG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDHECEG*SHMISL
Trigger: CAGAGATATCATATGAGATCACCCCTCGCATTCGTG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGACATGTCACTTTGTTaGCAGACTTCTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFDMSLC*QTSPRQ
Trigger: TTGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAGAGGGAGTTCCTGCTaGAAGATTGCACAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRGSSC*KIAQSE
Trigger: TTCAGACTGTGCAATCTTTCAGCAGGAACTCCCTCT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAATGGGATTAGGAAATaGTCCAGTTCTACCACTCTC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSNGIRK*SSSTTL
Trigger: GAGAGTGGTAGAACTGGATCATTTCCTAATCCCATT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATTTAGAAATAGGCTATaGGGGAGAAGGGGCATAAAG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSFRNRL*GRRGIK
Trigger: CTTTATGCCCCTTCTCCCTCATAGCCTATTTCTAAA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCATCTCCTTTTCTGCTaGCTCATCAGGATGGATACC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDHLLFC*LIRMDT
Trigger: GGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATGTTGGAAAGGCAGCTaGTGGGGAAGTTACGGGAGA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERCWKGS*WGSYGR
Trigger: TCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCAACA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGCTTTTAGCAATCTTTaGTTTATCCTCCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCAFSNL*FILLIQ
Trigger: TTGAATGAGGAGGATAAAGCAAAGATTGCTAAAAGC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATACCTTGCCAAAGCTATaGAGGAACTCCACAATGGTC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDTLPKL*RNSTMV
Trigger: GACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGTGGCTCTTCAGTGCTaGCAGAATACAAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDVALQC*QNTRNA
Trigger: AGCATTCCTTGTATTCTGGCAGCACTGAAGAGCCAC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCCCTGTTGTTCCCTTaGCTGTGGTCTCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPLLFP*LWSLKP
Trigger: TGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCCCAAACTGTGAGCTaGGAACTAGCAAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESQTVS*ELARIK
Trigger: TTTGATTCTTGCTAGTTCCCAGCTCACAGTTTGGGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATCCCAAACTGTGAGCTaGGAACTAGCAAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSQTVS*ELARIK
Trigger: TTTGATTCTTGCTAGTTCCCAGCTCACAGTTTGGGA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGGTTGCTGCCAGGATTaGCAGATGGGTACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERGCCQD*QMGTVS
Trigger: ACTCACAGTACCCATCTGCCAATCCTGGCAGCAACC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCACACATCTTCAGTTCTaGCTGCTCTTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFTHLQF*LLFFQL
Trigger: GAGCTGGAAGAAGAGCAGCCAGAACTGAAGATGTGT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATGCGGGACAAACTTCTaGAGAGATTTCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERCGTNF*RDFWGG
Trigger: GCCTCCCCAGAAATCTCTCCAGAAGTTTGTCCCGCA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTGGAAAGGCAGCTGCTaGGGAAGTTACGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCWKGSC*GSYGRG
Trigger: GCCTCTCCCGTAACTTCCCCAGCAGCTGCCTTTCCA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGAAAGCCAGGATCATaGAGTGCAGCCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGKPGS*SAAFSS
Trigger: GCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTACCCAGCCAAGGGCGTaGAAGAGAACTGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCTQPRA*KRTALE
Trigger: CTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCCCTGTGGGACTCTGTaGCATTTCTCCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCPCGTL*HFSRVS
Trigger: GGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACAGGTGATATCCTCCTaGGAGTCGGAGAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKQVISS*ESERCS
Trigger: TGAGCACCTCTCCGACTCCCAGGAGGATATCACCTG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGTGAGATCACTGTGGTaGTTCCGCATAGAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERVRSLW*FRIESR
Trigger: GCGACTCTCTATGCGGAACCACCACAGTGATCTCAC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCGGCGCGACACACTTaGGAGTTAAGTCCACTTTAC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPARHT*ELSPLY
Trigger: GTAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCTTGGGGAAACTGAATaGATCCTATCAAACAATACA +
Preference number: 4 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLALGETE*ILSNNT
Trigger: TGTATTGTTTGATAGGATCCATTCAGTTTCCCCAAG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCTTGGGGAAACTGAATaGATCCTATCAAACAATACA +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSELGETE*ILSNNT
Trigger: TGTATTGTTTGATAGGATCCATTCAGTTTCCCCAAG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGATCACCTCAAAATTCTaGTCAGGAAAGGAATCATAC +
Preference number: 4 (lower is better)
Translates to: NTGSQARTHTHTHSARSEITSKF*SGKESY
Trigger: GTATGATTCCTTTCCTGACCAGAATTTTGAGGTGAT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGAGTTCAAAATCCCTaGAGTAGTAGTGTGAGATAC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSRVQNP*SSSVRY
Trigger: GTATCTCACACTACTACTTCAGGGATTTTGAACTCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTTCTAGAAAGCTGCTaGCATCCTTATTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDFLESC*HPYLLG
Trigger: CCCCAGCAAATAAGGATGTCAGCAGCTTTCTAGAAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKPKHLG*VKQLFA
Trigger: CGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTATCAGGTGTGAGGACTaGGCTGCTCAACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCIRCED*AAQQGA
Trigger: AGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGAT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACCTCTCCCCAGCTACTaGGTTTCAGAAAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKPLPSY*VSEKAG
Trigger: TCCAGCCTTTTCTGAAACTCAGTAGCTGGGGAGAGG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAAATACTCTTGTCATaGAGAGAAAATCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSQILLS*RENPPS
Trigger: GCTAGGTGGATTTTCTCTTCATGACAAGAGTATTTG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCAAATACTCTTGTCATaGAGAGAAAATCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHQILLS*RENPPS
Trigger: GCTAGGTGGATTTTCTCTTCATGACAAGAGTATTTG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTACTCACTGGCTCTGGTaGCAGAGAGTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCTHWLW*QRVEGL
Trigger: GAGCCCTTCAACTCTCTGGCACCAGAGCCAGTGAGT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATTCTTAGCTTCCTTCTaGTTTAAGCTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSFLASF*FKLLVS
Trigger: AGAGACCAAGAGCTTAAAGCAGAAGGAAGCTAAGAA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCCTCCAAGATCATCTaGTGCCTCTGCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSSKII*CLCRSS
Trigger: GGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGAGCCATTGAGCTCATaGACAAGGAAGGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKEPLSS*TRKART
Trigger: TGTCCTGGCCTTCCTTGTGCATGAGCTCAATGGCTC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACTCTGGGATGCTAGATaGTGTGGCATCAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLWDAR*CGINLS
Trigger: GGAGAGGTTGATGCCACAGCATCTAGCATCCCAGAG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTAAGATGCCTAGGTTaGATAGACCCGGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLRCLG*IDPGLV
Trigger: AACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAAAGGGGAGCCTTCTTaGTCCAGGAACCCCTTATGG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKKGEPS*SRNPLW
Trigger: CCATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAAGCGGCGCATGATGTaGCCAGCCTTGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCKRRMM*PALPTS
Trigger: TGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGAAGGACCTCATCTCTaGACCTCTTACTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEEREGPHL*TSYLRS
Trigger: GCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTACCCCGCCATATGAGTaGCTGGTCCCTAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCTPPYE*LVPRER
Trigger: TCTTTCCCTAGGGACCAGGCACTCATATGGCGGGGT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCAGTAAAGTTAAAATaGTCGTTTGCCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPVKLK*SFASIS
Trigger: GGAAATGGAGGCAAACGACCATTTTAACTTTACTGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCAGTAAAGTTAAAATaGTCGTTTGCCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSPVKLK*SFASIS
Trigger: GGAAATGGAGGCAAACGACCATTTTAACTTTACTGG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAACCTCCTCAAAATTCTaGTCAGGAAAGGAATCATAC +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSTSSKF*SGKESY
Trigger: GTATGATTCCTTTCCTGACCAGAATTTTGAGGAGGT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379441.7
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCTAAACAGCTCACTGTaGGGTCAGGGACCAGGACTG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCLNSSL*GQGPGL
Trigger: CAGTCCTGGTCCCTGACCCCACAGTGAGCTGTTTAG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGATTTTGACCTTAGGTaGCCGACCTCGACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKDFDLR*PTSTPF
Trigger: AAACGGGGTCGAGGTCGGCCACCTAAGGTCAAAATC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATCATTCAATGTTTCTTaGGCCTCCAGTTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSSFNVS*ASSFFR
Trigger: CCTAAAGAAACTGGAGGCCCAAGAAACATTGAATGA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAATCTGCTTTACAGGCTaGCTTGGCTTTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERICFTG*LGFGHL
Trigger: GAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGAT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCCAAGCGCCTCTGTGTaGCCAGGGTCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCPSASV*PGSYLL
Trigger: AAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGCAGGAACTCCACAATaGTCAAGCAGTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERAGTPQ*SSSLRR
Trigger: CCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACAGGAGAACTGGCAGTaGTGTTGGAGCCAGCTAACT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKQENWQ*CWSQLT
Trigger: AGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTTCACGGGTAGAGTCTaGGCTAGGACATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCFTGRV*ARTCPA
Trigger: GGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAATGTGAGATCACTGTaGTGGTTCCGCATAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFNVRSL*WFRIES
Trigger: ACTCTCTATGCGGAACCACCACAGTGATCTCACATT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTGGTGTTGATGGTGTaGTTTCTTCCTGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLVLMV*FLPVNQ
Trigger: CTGGTTGACAGGAAGAAACCACACCATCAACACCAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTGTTCCCTTGCCTGTaGTCTCTTAAGCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDLFPCL*SLKPVI
Trigger: TATGACTGGCTTAAGAGACCACAGGCAAGGGAACAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAATCATACAGTTCTTGTaGATCAAAGTTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSIIQFL*IKVKPH
Trigger: ATGGGGCTTAACTTTGATTCACAAGAACTGTATGAT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGCAAAGATAGAGGTTaGTGTTTGACTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGKDRG*CLTIIC
Trigger: GCAGATGATAGTCAAACATCAACCTCTATCTTTGCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAGCATCTGGGATGAGTaGAGCAGCTTTTTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSIWDE*SSFLRK
Trigger: CTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACAGAGTCATCCTCGTTaGAAGTCTGGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERQSHPR*KSGSCQ
Trigger: TTGACAACTGCCAGACTTTCAACGAGGATGACTCTG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGGTACTTGGGGAAACTaGATGGATCCTATCAAACAA +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFGTWGN*MDPIKQ
Trigger: TTGTTTGATAGGATCCATTCAGTTTCCCCAAGTACC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAAGAAATGGCCCCTTTaGTCATGCCCTATCCCTACC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKKKWPL*SCPIPT
Trigger: GGTAGGGATAGGGCATGATCAAAGGGGCCATTTCTT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTGGTGTCTTATCCGTaGGTGGGAAGTGGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLVSYP*VGSGKL
Trigger: CAGCTTACCACTTCCCACTCACGGATAAGACACCAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATATCACTTCTGGAAATTaGTTCATCCTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDITSGN*FILFPQ
Trigger: CTGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGAT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATGGCTCTACTCCATATaGCATAAGGAAGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKWLYSI*HKEAAQ
Trigger: CTGCGCTGCTTCCTTATGGCATATGGAGTAGAGCCA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCCCCTGTTGTTCCCTTaGCTGTGGTCTCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCPLLFP*LWSLKP
Trigger: TGGCTTAAGAGACCACAGGCAAGGGAACAACAGGGG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACACATCTTCAGTTCTaGCTGCTCTTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTHLQF*LLFFQL
Trigger: GAGCTGGAAGAAGAGCAGCCAGAACTGAAGATGTGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGACATCCTTATTTGCTaGGGAGGCTGTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKDILIC*GGCWKG
Trigger: GCCTTTCCAACAGCCTCCCCAGCAAATAAGGATGTC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGTACTTGATCACTTCTaGAAATTGCTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: GERDVGIRGCGALPRARSVLDHF*KLLHPL
Trigger: AAGAGGATGAAGCAATTTCCAGAAGTGATCAAGTAC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCTTTACAGGCTGGCTTaGCTTTGGTCACCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCLYRLA*LWSPPP
Trigger: AGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAATCTGCTTTACAGGCTaGCTTGGCTTTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKICFTG*LGFGHL
Trigger: GAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGAT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAAGTCAGGCAGGGGCTaGTGGTCAGTCAGACACATA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCKSGRG*WSVRHI
Trigger: TATGTGTCTGACTGACCACCAGCCCCTGCCTGACTT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACTAGGTCTATTCATTaGCTTGGAGGAGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTRSIH*LGGGKL
Trigger: CAGCTTGCCTCCTCCAAGCCAATGAATAGACCTAGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGCTTTCCTCTCGTGTTaGGGGCTTAACTTGGACATA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERAFLSC*GLNLDI
Trigger: TATGTCCAAGTTAAGCCCCCAACACGAGAGGAAAGC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACATCACCTCAAAATTCTaGTCAGGAAAGGAATCATAC +
Preference number: 4 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHITSKF*SGKESY
Trigger: GTATGATTCCTTTCCTGACCAGAATTTTGAGGTGAT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAGAGTTCAAAATCCCTaGAGTAGTAGTGTGAGATAC +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRVQNP*SSSVRY
Trigger: GTATCTCACACTACTACTTCAGGGATTTTGAACTCT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATTTCTAGAAAGCTGCTaGCATCCTTATTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERFLESC*HPYLLG
Trigger: CCCCAGCAAATAAGGATGTCAGCAGCTTTCTAGAAA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACAATACGTCTCCTCATaGCATCACCACTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKQYVSS*HHHYQK
Trigger: CTTCTGGTAGTGGTGATGTCATGAGGAGACGTATTG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLNQSA*GSGLDS
Trigger: AGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAAGAAATGGCCCCTTTaGTCATGCCCTATCCCTACC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCKKWPL*SCPIPT
Trigger: GGTAGGGATAGGGCATGATCAAAGGGGCCATTTCTT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGAAGTGGTAAGCTGGTaGTGGTCCCATATTTGCTAT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEEREVVSW*WSHICY
Trigger: ATAGCAAATATGGGACCATCACCAGCTTACCACTTC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGCTTTTAGCAATCTTTaGTTTATCCTCCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREAFSNL*FILLIQ
Trigger: TTGAATGAGGAGGATAAAGCAAAGATTGCTAAAAGC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAACCTTGCCAAAGCTATaGAGGAACTCCACAATGGTC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKTLPKL*RNSTMV
Trigger: GACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAAACTTTTCCCTTGCTaGGGGAAGTTCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKKLFPC*GKFMGD
Trigger: GTCTCCCATGAACTTCCCCCAGCAAGGGAAAAGTTT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAGGACTGAGACCTCTTaGTGTAACGATTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRTETS*CNDSTE
Trigger: TTCTGTGGAATCGTTACACCAAGAGGTCTCAGTCCT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCATTCAATGTTTCTTaGGCCTCCAGTTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSFNVS*ASSFFR
Trigger: CCTAAAGAAACTGGAGGCCCAAGAAACATTGAATGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTCTGCTTTAAGCTCTTaGTCTCTTGTTTCCGCTTAT +
Preference number: 4 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDSALSS*SLVSAY
Trigger: ATAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAATTGTCTCTTGTCAGTaGGATCTCAGACACCTTCTC +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERIVSCQ*DLRHLL
Trigger: GAGAAGGTGTCTGAGATCCCACTGACAAGAGACAAT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACTGAGTTTTTCTATCTaGCGCTCTAGCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLSFSI*RSSSGM
Trigger: CATCCCAGAGCTAGAGCGCCAGATAGAAAAACTCAG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACAATGGAACATTTCTTaGATGCCTCAGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERQWNIS*MPQLSA
Trigger: AGCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCTGAAGTAGTAGTGTaGGATACAGTAGATAAGCCA +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPEVVV*DTVDKP
Trigger: TGGCTTATCTACTGTATCTCACACTACTACTTCAGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATA +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLLRCL*SAFSRI
Trigger: TATCCGGGAGAAGGCACTTCACAAACACCTTAACAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCLIIPS*KAGSCL
Trigger: CAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAG...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCAAAGCTGTTATCTTaGAGGACAGACTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSKLLS*RTDSPR
Trigger: CCTAGGGGAGTCTGTCCTGCAAGATAACAGCTTTGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTACCTCCTGGGAGGGTaGAAAGGTTTGAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCYLLGG*KGLNAR
Trigger: TCTAGCATTCAAACCTTTGCACCCTCCCAGGAGGTA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKKTNFF*GSNTSP
Trigger: AGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAATGTGAGATCACTGTaGTGGTTCCGCATAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKNVRSL*WFRIES
Trigger: ACTCTCTATGCGGAACCACCACAGTGATCTCACATT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAACAATGGAACATTTCTTaGATGCCTCAGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKQWNIS*MPQLSA
Trigger: AGCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTG...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTACAAAGCAGGAACCATaGAGATTTCACTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCTKQEP*RFHSPI
Trigger: GATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGGAAGTCTGAAGATTaGGTTTCCATTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGKSED*VSISSC
Trigger: ACAGGAAGAAATGGAAACTCAATCTTCAGACTTCCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTGCGAAAGAAAAGCTaGCGCTTGCTGAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLRKKS*RLLSFS
Trigger: AGAAAAACTCAGCAAGCGTCAGCTTTTCTTTCGCAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAAAGATTGCACAGTCTaGAGAGGCTGGAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERKDCTV*RGWNKN
Trigger: ATTTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTTAGAAATAGGCTATaGGGGAGAAGGGGCATAAAG +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKFRNRL*GRRGIK
Trigger: CTTTATGCCCCTTCTCCCTCATAGCCTATTTCTAAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGCTTTTAGCAATCTTTaGTTTATCCTCCTCATTCAA +
Preference number: 4 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFAFSNL*FILLIQ
Trigger: TTGAATGAGGAGGATAAAGCAAAGATTGCTAAAAGC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR GCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATTCTTAGCTTCCTTCTaGTTTAAGCTCTTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERFLASF*FKLLVS
Trigger: AGAGACCAAGAGCTTAAAGCAGAAGGAAGCTAAGAA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCATTCAATGTTTCTTaGGCCTCCAGTTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSFNVS*ASSFFR
Trigger: CCTAAAGAAACTGGAGGCCCAAGAAACATTGAATGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTTGGTGTTGATGGTGTaGTTTCTTCCTGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCLVLMV*FLPVNQ
Trigger: CTGGTTGACAGGAAGAAACCACACCATCAACACCAA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAATCATACAGTTCTTGTaGATCAAAGTTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERIIQFL*IKVKPH
Trigger: ATGGGGCTTAACTTTGATTCACAAGAACTGTATGAT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGGCAAAGATAGAGGTTaGTGTTTGACTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCGKDRG*CLTIIC
Trigger: GCAGATGATAGTCAAACATCAACCTCTATCTTTGCC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGGGAAGTCTGAAGATTaGGTTTCCATTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCGKSED*VSISSC
Trigger: ACAGGAAGAAATGGAAACTCAATCTTCAGACTTCCC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTGGGAAAAATGGGAATaGAAACAGGTACTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCWEKWE*KQVLGE
Trigger: TTCCCCAAGTACCTGTTTTCATTCCCATTTTTCCCA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR TCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAAAGATTGCACAGTCTaGAGAGGCTGGAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKKDCTV*RGWNKN
Trigger: ATTTTTGTTCCAGCCTCTTCAGACTGTGCAATCTTT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGTTAAAATGGTCGTTTaGCTCCATTTCCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCVKMVV*LHFHVR
Trigger: CCTGACATGGAAATGGAGGCAAACGACCATTTTAAC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS-3UTR GCA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTATCACTTCTGGAAATTaGTTCATCCTCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCITSGN*FILFPQ
Trigger: CTGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGAT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CCA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGTACTTGATCACTTCTaGAAATTGCTTCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKVLDHF*KLLHPL
Trigger: AAGAGGATGAAGCAATTTCCAGAAGTGATCAAGTAC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
3UTR CAA 72 bp AGAGTGTTTCTTGGTTTCACACATTCACTAGAACTATaGCTATTGTTAAATAACCCCAGAATGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVFLGFTHSLEL*LLLNNPRMLGH
Trigger: GTGCCCCAGCATTCTGGGGTTATTTAACAATAGCAATAGTTCTAGTGAATGTGTGAAACCAAGAAACACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp TCCCAGGCAATGGACCTCTCCAGCTGGCCCAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGCTCGAGGGTCTGGCGCCAGACACGA +
Preference number: 5 (lower is better)
Translates to: SQAMDLSSWPRHKHT*AALRHRSRVWRQTR
Trigger: TCGTGTCTGGCGCCAGACCCTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCATTGCCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp ACAAGGAAGGCCAGGACAGCAGCCTTCTGCTGGGGTGGCTGGGCCTaGAAAGGCTGGGTGCGCAGGCGGTCACAGAGGGCTGGCTCTACT +
Preference number: 5 (lower is better)
Translates to: TRKARTAAFCWGGWA*KGWVRRRSQRAGST
Trigger: AGTAGAGCCAGCCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGGCTGCTGTCCTGGCCTTCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 90 bp GCCAGCCGCATCACAGCCAGGTCCAAAGGGTTGGTAGTTTTACGCTaGGGTGCCAGTCCCTCCCTGCCCCGACCTCGCCAGGTGATATCC +
Preference number: 5 (lower is better)
Translates to: ASRITARSKGLVVLR*GASPSLPRPRQVIS
Trigger: GGATATCACCTGGCGAGGTCGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAACCCTTTGGACCTGGCTGTGATGCGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp CTGTCCCAGCCCTGTGGGACTCTGTGGCATTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAACCCAGCCAAGGGCGTGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LSQPCGTLWHFSRVS*SPLRGQPSQGRGRE
Trigger: TTCTCTTCCACGCCCTTGGCTGGGTTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGGCTGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGAGAAGAGGGCAGGGTaGAGTGACGCATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLEKRAG*SDAWAA
Trigger: GGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGAGAGTCGCCGCCGCTaGGAGGGGGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEESRRR*EGESPS
Trigger: AGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCTC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GGCCATAATACCAGGTCTCCCCCTGCCATCGGTGGCTGCCCTTCTTaGTGCGCACCTCTCTCCGCCACCCATGTTGGAGGGGAAGACGAA +
Preference number: 5 (lower is better)
Translates to: GHNTRSPPAIGGCPS*CAPLSATHVGGEDE
Trigger: TTCGTCTTCCCCTCCAACATGGGTGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGAGACCTGGTATTATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp AGCAGCCTGACCAGCAGGTCTTGCACCTCACCCAAGCTGTCACCTTaGCACAGGAGTCCCTCCTGCAGGACCCCCAGGCTAGGCACATCT +
Preference number: 5 (lower is better)
Translates to: SSLTSRSCTSPKLSP*HRSPSCRTPRLGTS
Trigger: AGATGTGCCTAGCCTGGGGGTCCTGCAGGAGGGACTCCTGTGTCAAGGTGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS GCA 90 bp CCGCATCACAGCCAGGTCCAAAGGGTTGGTAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCGACCTCGCCAGGTGATATCCTCCTG +
Preference number: 5 (lower is better)
Translates to: PHHSQVQRVGSFTLR*QSLPAPTSPGDILL
Trigger: CAGGAGGATATCACCTGGCGAGGTCGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAACCCTTTGGACCTGGCTGTGATGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp CTCCTCCATGATCCGAGAACTGCGCCTCCGTCCCAGGCATTCCTCTaGCCCTTCCATCTCTACTTCAGACCGCCCAGTTCGCTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLHDPRTAPPSQAFL*PFHLYFRPPSSLGQ
Trigger: CTGGCCAAGCGAACTGGGCGGTCTGAAGTAGAGATGGAAGGGCCAGAGGAATGCCTGGGACGGAGGCGCAGTTCTCGGATCATGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp AGGCACAAGCACACCTGGGCTGCGCTCCGGCACCGCTCGAGGGTCTaGCGCCAGACACGAATGCGAGGGGTGATCTCATATGATATCTCT +
Preference number: 5 (lower is better)
Translates to: RHKHTWAALRHRSRV*RQTRMRGVISYDIS
Trigger: AGAGATATCATATGAGATCACCCCTCGCATTCGTGTCTGGCGCCAGACCCTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTCCTGACCAGCAGGTCTaGCACCTCACCCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLPDQQV*HLTQAV
Trigger: GACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGG...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGGTGTGGGGGCAGCATaGCAGGGCATCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAGVGAA*QGIWAE
Trigger: CTCAGCCCAGATGCCCTGCAATGCTGCCCCCACACC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGGTGTGGGGGCAGCATaGCAGGGCATCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEGVGAA*QGIWAE
Trigger: CTCAGCCCAGATGCCCTGCAATGCTGCCCCCACACC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp CCGTTGGCCCAGAACTCTTGGCTCCCAGCCCGAAGGTTAGTGTTATaGCTTGGGGATGAAGGTTGCCGGCTGCCCCCAAGGATGCCGTTG +
Preference number: 5 (lower is better)
Translates to: PLAQNSWLPARRLVL*LGDEGCRLPPRMPL
Trigger: CAACGGCATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAACACTAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp GGTCCTGCCTGGATCACCACTTTCCTGGCGACATCTGCAGGGCCCTaGTCACCGGAAAGGAAAGATTCCCATGTCAGGCTGGCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GPAWITTFLATSAGP*SPERKDSHVRLAQL
Trigger: GAGCTGTGCCAGCCTGACATGGGAATCTTTCCTTTCCGGTGACCAGGGCCCTGCAGATGTCGCCAGGAAAGTGGTGATCCAGGCAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549506.5
ENST00000550730.1
CDS CCA 90 bp CTGTCCCTTCAGTGCAGCCTGGTCCTGCCTGGATCACCACTTTCCTaGCGACATCTGCAGGGCCCTGGTCACCGGAAAGGAAAGATTCCC +
Preference number: 5 (lower is better)
Translates to: LSLQCSLVLPGSPLS*RHLQGPGHRKGKIP
Trigger: GGGAATCTTTCCTTTCCGGTGACCAGGGCCCTGCAGATGTCGCCAGGAAAGTGGTGATCCAGGCAGGACCAGGCTGCACTGAAGGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549506.5
ENST00000550730.1
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCGGTGGCTGCCCTTCTaGATGCGCACCTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRWLPF*MRTSLR
Trigger: GCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGCTTTACAGGCTGGCTaGGCTTTGGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLALQAG*ALVTSS
Trigger: GGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCGGGGGTGTAGGGCCTaGAGCATGGCATCCAACATC +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCRGCRA*SMASNI
Trigger: GATGTTGGATGCCATGCTCAAGGCCCTACACCCCCG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGCACAACCTCATGAGTaGGCCAGAGGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEAQPHE*ARGAPA
Trigger: TGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGCACAACCTCATGAGTaGGCCAGAGGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSAQPHE*ARGAPA
Trigger: TGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGAGAGTCGCCGCCGCTaGGAGGGGGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSESRRR*EGESPS
Trigger: AGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGTCGCCGCCGCTaGGAGGGGGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRESRRR*EGESPS
Trigger: AGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GGGTGGGTCCTTGAGGTTGCTGCCAGGATTGGCAGATGGGTACTGTaGGTAGTTCCAGAGACAGTCGTAGGCCACGCTGGGGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: GWVLEVAARIGRWVL*VVPETVVGHAGVME
Trigger: CTCCATCACCCCAGCGTGGCCTACGACTGTCTCTGGAACTACTCACAGTACCCATCTGCCAATCCTGGCAGCAACCTCAAGGACCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000546695.5
ENST00000549506.5
ENST00000549884.6
ENST00000551812.5
ENST00000551959.1
CDS TCA 90 bp TTGGCAGCACTAGGTCTATTCATTGGCTTGGAGGAGGCAAGCTGCTaGGGGGAGGGAGTGGGTTGGTCCTCAGAAACTGCAGGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: LAALGLFIGLEEASC*GEGVGWSSETAGGG
Trigger: ACCGCCCCCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCCTCAGCAGCTTGCCTCCTCCAAGCCAATGAATAGACCTAGTGCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GCACCATTAGGTGTGCTAAGCAGGGCCTTCTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCCCGCAGGTACCGCCGTTCTACATTC +
Preference number: 5 (lower is better)
Translates to: APLGVLSRAFSSTTS*VGQRGSRRYRRSTF
Trigger: GAATGTAGAACGGCGGTACCTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGAGAAGGCCCTGCTTAGCACACCTAATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp AGTGCAGCCTGGTCCTGCCTGGATCACCACTTTCCTGGCGACATCTaGAGGGCCCTGGTCACCGGAAAGGAAAGATTCCCATGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: SAAWSCLDHHFPGDI*RALVTGKERFPCQA
Trigger: AGCCTGACATGGGAATCTTTCCTTTCCGGTGACCAGGGCCCTGCAGATGTCGCCAGGAAAGTGGTGATCCAGGCAGGACCAGGCTGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549506.5
ENST00000550730.1
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTGGACTCTGGGTACCGTaGGCCCAGAACTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSGLWVP*AQNSWL
Trigger: GAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCC...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCTGCTGGGGAGGTTGTaGGCGAGACTGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLLGRL*ARLLVR
Trigger: CCTCACCAGCAGTCTCGCCAACAACCTCCCCAGCAG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGTGGCTGCCCTTCTaGATGCGCACCTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRWLPF*MRTSLR
Trigger: GCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTACCCAAGCTGTCACCTaGACACAGGAGTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCTQAVT*TQESLL
Trigger: CAGGAGGGACTCCTGTGTCAAGGTGACAGCTTGGGT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCCTGACCAGCAGGTCTaGCACCTCACCCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSPDQQV*HLTQAV
Trigger: GACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGAGAAGAGGGCAGGGTaGAGTGACGCATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSEKRAG*SDAWAA
Trigger: GGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGTGTGGGGGCAGCATaGCAGGGCATCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGVGAA*QGIWAE
Trigger: CTCAGCCCAGATGCCCTGCAATGCTGCCCCCACACC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGTGTGGGGGCAGCATaGCAGGGCATCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGVGAA*QGIWAE
Trigger: CTCAGCCCAGATGCCCTGCAATGCTGCCCCCACACC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGGTCTCCCTCTCCGTTaGGGCTGTCCCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRGLPLR*GCPSPV
Trigger: CACAGGGCTGGGACAGCCCAAACGGAGAGGGAGACC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGTCTCCCTCTCCGTTaGGGCTGTCCCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGLPLR*GCPSPV
Trigger: CACAGGGCTGGGACAGCCCAAACGGAGAGGGAGACC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GCCTTCTCAGTGTTTCGAGGTCGACCCCGTTTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCCTCTGCTGAGAGCTGCACCCACTGC +
Preference number: 5 (lower is better)
Translates to: AFSVFRGRPRLPVIA*ILDGISSAESCTHC
Trigger: GCAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGGGGTCGACCTCGAAACACTGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp CTCAGCCAAGACAGGAAGGCTGACTGGCTGAGGTCATGCTGGCTCTaGCCCAGTGACAAAGGGGAGCCTTCTTGCTCCAGGAACCCCTTA +
Preference number: 5 (lower is better)
Translates to: LSQDRKADWLRSCWL*PSDKGEPSCSRNPL
Trigger: TAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp GCTCGCCTCTTAGGGGCCAACCCAGCCAAGGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTGGCAGCACTAGGTCTATTCATTGGC +
Preference number: 5 (lower is better)
Translates to: ARLLGANPAKGVEEN*TGEQGLAALGLFIG
Trigger: GCCAATGAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGTTGGCCCCTAAGAGGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGGTGGGTCCTTGAGGTaGCTGCCAGGATTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEGGSLR*LPGLAD
Trigger: ATCTGCCAATCCTGGCAGCAACCTCAAGGACCCACC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTGCTGGGGAGGTTGTaGGCGAGACTGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLLGRL*ARLLVR
Trigger: CCTCACCAGCAGTCTCGCCAACAACCTCCCCAGCAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTCTCCGCCACCCATGTaGGAGGGGAAGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSESPPPM*EGKTNF
Trigger: GAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAGA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTCTCCGCCACCCATGTaGGAGGGGAAGACGAACTTC +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSSPPPM*EGKTNF
Trigger: GAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAGA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCAGGCTGGCTTGGCTTaGGTCACCTCCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAQAGLA*VTSSFS
Trigger: GGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCAGGCTGGCTTGGCTTaGGTCACCTCCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSQAGLA*VTSSFS
Trigger: GGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGACCGCCCAGTTCGCTaGGCCAGAACAGTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEDRPVR*ARTVFS
Trigger: GCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGTC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGAGAAGAGGGCAGGGTaGAGTGACGCATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREEKRAG*SDAWAA
Trigger: GGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGCACAACCTCATGAGTaGGCCAGAGGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSAQPHE*ARGAPA
Trigger: TGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTGAGGCCGGCCCCATaGCTACCTGGCCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELRPAP*LPGLHL
Trigger: AAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGAGGCCGGCCCCATaGCTACCTGGCCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLRPAP*LPGLHL
Trigger: AAGATGGAGGCCAGGTAGCAATGGGGCCGGCCTCAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCGCACTGAATCCCCCTTaGCTCCAGCAACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAALNPP*LQQLSQ
Trigger: CTGGCTGAGTTGCTGGAGCAAAGGGGGATTCAGTGC...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS TCA 90 bp GAACTCTTGGCTCCCAGCCCGAAGGTTAGTGTTATGACTTGGGGATaGAGGTTGCCGGCTGCCCCCAAGGATGCCGTTGAGTGGGTATTG +
Preference number: 5 (lower is better)
Translates to: ELLAPSPKVSVMTWG*RLPAAPKDAVEWVL
Trigger: CAATACCCACTCAACGGCATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAACACTAACCTTCGGGCTGGGAGCCAAGAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp CCGTTTGCCAGTAATTGCCTGAATCCTCGACGGGATCTCCTCTGCTaGGAGCTGCACCCACTGCAAGCCCTCTGGCGTGTCTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PFASNCLNPRRDLLC*ELHPLQALWRVSFF
Trigger: GAAGAAAGAGACACGCCAGAGGGCTTGCAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp AGTAGGAGGGAAAGCCAGGATCATGGAGTGCAGCCTTCAGCAGCCTaGCCAGCAGGTCTTGCACCTCACCCAAGCTGTCACCTTGACACA +
Preference number: 5 (lower is better)
Translates to: SRRESQDHGVQPSAA*PAGLAPHPSCHLDT
Trigger: TGTGTCAAGGTGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCCCTCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 90 bp TATGGCTCTGAGTCTGGCTCAGCCAAGACAGGAAGGCTGACTGGCTaGGGTCATGCTGGCTCTGACCCAGTGACAAAGGGGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: YGSESGSAKTGRLTG*GHAGSDPVTKGSLL
Trigger: AAGAAGGCTCCCCTTTGTCACTGGGTCAGAGCCAGCATGACCTCAGCCAGTCAGCCTTCCTGTCTTGGCTGAGCCAGACTCAGAGCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp CTATCAGGTGTGAGGACTGAGCTGCTCAACAGGGAGCTATGGCTCTaGGTCTGGCTCAGCCAAGACAGGAAGGCTGACTGGCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSGVRTELLNRELWL*VWLSQDRKADWLRS
Trigger: TGACCTCAGCCAGTCAGCCTTCCTGTCTTGGCTGAGCCAGACTCAGAGCCATAGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GCAGCATTGCAGGGCATCTGGGCTGAGATGTTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCTGCCTCATCAGGCTCTGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AALQGIWAEMLNQSA*GSGLDSASSGSGSS
Trigger: GGAGGAGCCAGAGCCTGATGAGGCAGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATCTCAGCCCAGATGCCCTGCAATGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GTTTGTGAAGTGCCTTCTCCCGGATACCTCGGGGGTGTAGGGCCTTaGGCATGGCATCCAACATCTCAGGATCTCGTATCCACCACCAGC +
Preference number: 5 (lower is better)
Translates to: VCEVPSPGYLGGVGP*AWHPTSQDLVSTTS
Trigger: GCTGGTGGTGGATACGAGATCCTGAGATGTTGGATGCCATGCTCAAGGCCCTACACCCCCGAGGTATCCGGGAGAAGGCACTTCACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS TCA 90 bp GCCTTCTCAGTGTTTCGAGGTCGACCCCGTTTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCCTCTGCTGAGAGCTGCACCCACTCT +
Preference number: 5 (lower is better)
Translates to: AFSVFRGRPRLPVIA*ILDGISSAESCTHS
Trigger: AGAGTGGGTGCAGCTCTCAGCAGAGGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGGGGTCGACCTCGAAACACTGAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547650.1
CDS GCA 90 bp GCTCGCCTCTTAGGGGCCAACCCAGCCAAGGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTGGCAGCACTAGGTCTATTCATCTGT +
Preference number: 5 (lower is better)
Translates to: ARLLGANPAKGVEEN*TGEQGLAALGLFIC
Trigger: ACAGATGAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGTTGGCCCCTAAGAGGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553222.1
CDS GCA 90 bp ACTTGCACTCACCTGACAGTAGGAGGGAAAGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGACCAGCAGGTCTTGCACCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: TCTHLTVGGKARIME*SLQQPDQQVLHLTQ
Trigger: TTGGGTGAGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCCCTCCTACTGTCAGGTGAGTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551759.1
CDS CCA 90 bp CCAAGATCATCTGCTGCCTCTGCCGTTCCTCCAAGCGCCTCTGTGTaGCCAGGGTCTTATCTGCTTTACAGGCTGGCTTGGCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PRSSAASAVPPSASV*PGSYLLYRLAWLWS
Trigger: TGACCAAAGCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp ATTAGGTGTGCTAAGCAGGGCCTTCTCCAGCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAGGTACCGCCGTTCTACATTCTGTTC +
Preference number: 5 (lower is better)
Translates to: IRCAKQGLLQHNLMS*PEGLPQVPPFYILF
Trigger: GAACAGAATGTAGAACGGCGGTACCTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGAGAAGGCCCTGCTTAGCACACCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp CACCCAGCTCCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTaGTGTTGGATCCTCCCAAACTGTGAGCTGGGAACCACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HPAPHCPWASTSRKG*CWILPNCELGTTPE
Trigger: CTCTGGAGTGGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550730.1
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTCAAAGCCCAGCACCTaGCCAAAGCTATGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCSKPST*PKLCRN
Trigger: GTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTCAAAGGGGAGCCTTCTaGCTCCAGGAACCCCTTATG +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSQRGAF*LQEPLM
Trigger: CATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTTG...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAGGGGAGGGAGTGGGTaGGTCCTCAGAAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRGGSG*VLRNCR
Trigger: CCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCCT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGGGAGGGAGTGGGTaGGTCCTCAGAAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRGGSG*VLRNCR
Trigger: CCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGGGGGTGTAGGGCCTaGAGCATGGCATCCAACATC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERGCRA*SMASNI
Trigger: GATGTTGGATGCCATGCTCAAGGCCCTACACCCCCG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACGGGGGTGTAGGGCCTaGAGCATGGCATCCAACATC +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSRGCRA*SMASNI
Trigger: GATGTTGGATGCCATGCTCAAGGCCCTACACCCCCG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCGGGGGTGTAGGGCCTaGAGCATGGCATCCAACATC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRGCRA*SMASNI
Trigger: GATGTTGGATGCCATGCTCAAGGCCCTACACCCCCG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGACTCCCCACCTCCCTaGCCTCACAGATTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSDSPPP*PHRLAC
Trigger: ACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGACTCCCCACCTCCCTaGCCTCACAGATTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRDSPPP*PHRLAC
Trigger: ACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCTCTGCACCTCTTACTaGAGGAGCAAGAGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCLCTSY*RSKRRE
Trigger: TTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp TCTGTAGCGGTCCTGACCCAGGGAGACCGCCCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCGAAAGAAAAGCTGACGCTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SVAVLTQGDRPKHLG*VKQLFAKEKLTLAE
Trigger: CTCAGCAAGCGTCAGCTTTTCTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGGGCGGTCTCCCTGGGTCAGGACCGCTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GTTGTGATGGAGCTGGGTCTAGTTTTCCCGGACTGCTATCAGGTGTaGGGACTGAGCTGCTCAACAGGGAGCTATGGCTCTGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VVMELGLVFPDCYQV*GLSCSTGSYGSESG
Trigger: GCCAGACTCAGAGCCATAGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGATAGCAGTCCGGGAAAACTAGACCCAGCTCCATCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp AGGCAGACTTCCTGCAAGAAGTCCCTGTGCTTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATACCTCGGGGGTGTAGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RQTSCKKSLCLLRCL*SAFSRIPRGCRALS
Trigger: GCTCAAGGCCCTACACCCCCGAGGTATCCGGGAGAAGGCACTTCACAAACACCTTAACAAGCACAGGGACTTCTTGCAGGAAGTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS GCA 90 bp AGACACATATCCTCTGTCGGCTTCTTCATTTCCTCCAAGATCATCTaGTGCCTCTGCCGTTCCTCCAAGCGCCTCTGTGTGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RHISSVGFFISSKII*CLCRSSKRLCVARV
Trigger: GACCCTGGCCACACAGAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGAAATGAAGAAGCCGACAGAGGATATGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp GTCTTGTCAATCTCATTGATGATGAGGGTGGAGCCATTGAGCTCATaGACAAGGAAGGCCAGGACAGCAGCCTTCTGCTGGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VLSISLMMRVEPLSS*TRKARTAAFCWGGW
Trigger: CCAGCCACCCCAGCAGAAGGCTGCTGTCCTGGCCTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCATCATCAATGAGATTGACAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 90 bp TATGCAGGAACTCCACAATGGTCAAGCAGTCTGAGAAGGCTCCACTaGGCAATGTCAGACCAGGGACTCGTGAGAAGTCAGGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: YAGTPQWSSSLRRLH*AMSDQGLVRSQAGA
Trigger: AGCCCCTGCCTGACTTCTCACGAGTCCCTGGTCTGACATTGCCCAGTGGAGCCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 90 bp GCTCCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAGCTGGGAACCACTCCAGAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: APHCPWASTSRKGWC*ILPNCELGTTPESG
Trigger: TCCTGACTCTGGAGTGGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550730.1
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGGTGGGTCCTTGAGGTaGCTGCCAGGATTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSGGSLR*LPGLAD
Trigger: ATCTGCCAATCCTGGCAGCAACCTCAAGGACCCACC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTGCGGCTCAGGTACTaGATCACTTCTGGAAATTGC +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLLRLRY*ITSGNC
Trigger: GCAATTTCCAGAAGTGATCAAGTACCTGAGCCGCAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAGGCTGGCTTGGCTTaGGTCACCTCCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSQAGLA*VTSSFS
Trigger: GGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCAGGCTAGGCACATCTTaGGCAGGATCAAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRLGTS*AGSKPS
Trigger: GCTGGGCTTTGATCCTGCCAAAGATGTGCCTAGCCT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACCCAAGCTGTCACCTaGACACAGGAGTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTQAVT*TQESLL
Trigger: CAGGAGGGACTCCTGTGTCAAGGTGACAGCTTGGGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAACCCAAGCTGTCACCTaGACACAGGAGTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSTQAVT*TQESLL
Trigger: CAGGAGGGACTCCTGTGTCAAGGTGACAGCTTGGGT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGACCGCCCAGTTCGCTaGGCCAGAACAGTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHDRPVR*ARTVFS
Trigger: GCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGTC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGAGAAGAGGGCAGGGTaGAGTGACGCATGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDEKRAG*SDAWAA
Trigger: GGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGAACTGGCAGTGGTGTaGGAGCCAGCTAACTCCATC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSELAVV*EPANSI
Trigger: GATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTAGACATGTCACTTTGTaGACAGACTTCTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLRHVTL*TDFSQA
Trigger: TGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTCT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTGTTCCTGCTGAAAGATaGCACAGTCTGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCVPAER*HSLKRL
Trigger: CAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAAC...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTCAAGAAATGGCCCCTTaGATCATGCCCTATCCCTAC +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCQEMAP*IMPYPY
Trigger: GTAGGGATAGGGCATGATCAAAGGGGCCATTTCTTG...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGAACAGGAGCCCCTGTaGTTCCCTTGCCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSEQEPL*FPCLWS
Trigger: AGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGCACTGAATCCCCCTTaGCTCCAGCAACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSALNPP*LQQLSQ
Trigger: CTGGCTGAGTTGCTGGAGCAAAGGGGGATTCAGTGC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS GCA 90 bp CACATATCCTCTGTCGGCTTCTTCATTTCCTCCAAGATCATCTGCTaGCTCTGCCGTTCCTCCAAGCGCCTCTGTGTGGCCAGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: HISSVGFFISSKIIC*LCRSSKRLCVARVL
Trigger: TAAGACCCTGGCCACACAGAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGAAATGAAGAAGCCGACAGAGGATATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp CACCTCTCTCCGCCACCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HLSPPPMLEGKTNFF*GSNTSPHDITTTRS
Trigger: GCTTCTGGTAGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAGAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp CTCCACCTGCTGAGCCAAACAGACAGTACAGAACCAATCTCCTTCTaGGACAGCCTCCATCTTGGGACGATGGCAGTAAATGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LHLLSQTDSTEPISF*DSLHLGTMAVNVAA
Trigger: GGCTGCCACATTTACTGCCATCGTCCCAAGATGGAGGCTGTCCCAGAAGGAGATTGGTTCTGTACTGTCTGTTTGGCTCAGCAGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTATTCAAACTTTTCCCTaGCTGGGGGAAGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCIQTFP*LGEVHG
Trigger: CCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAAT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGGACTCTGGGTACCGTaGGCCCAGAACTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFGLWVP*AQNSWL
Trigger: GAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGACTCTGGGTACCGTaGGCCCAGAACTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGLWVP*AQNSWL
Trigger: GAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCTGGTGCCAGAGAGTaGAAGGGCTCCAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESGARE*KGSRES
Trigger: AGACTCTCTGGAGCCCTTCAACTCTCTGGCACCAGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTACGGGAGAGGCTTTaGGGGATGTCACTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLRERL*GMSLKP
Trigger: CGGCTTCAGTGACATCCCCAAAAGCCTCTCCCGTAA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACGGTGGCTGCCCTTCTaGATGCGCACCTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRWLPF*MRTSLR
Trigger: GCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTGATCACTTCTGGAAATaGCTTCATCCTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLDHFWK*LHPLPT
Trigger: TGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGATC...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGGGGGCCAAGTGCCCATGGCTATAGCTGGGAGTCAGCAGCTTTCCTCTCGTGTAATAGCTCAGTGATTTaGACCTTAGGTGGCCGACCT +
Preference number: 5 (lower is better)
Translates to: RGPSAHGYSWESAAFLSCNSSVI*TLGGRP
Trigger: AGGTCGGCCACCTAAGGTCAAAATCACTGAGCTATT...ACACGAGAGGAAAGCTGCTGACTCCCAGCTATAGCCATGGGCACTTGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGCTAGGCACATCTTaGGCAGGATCAAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRLGTS*AGSKPS
Trigger: GCTGGGCTTTGATCCTGCCAAAGATGTGCCTAGCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAACTGGCAGTGGTGTaGGAGCCAGCTAACTCCATC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRELAVV*EPANSI
Trigger: GATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAGAACTGGCAGTGGTGTaGGAGCCAGCTAACTCCATC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSELAVV*EPANSI
Trigger: GATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTC...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCACAAAGGGGAGCCTTCTaGCTCCAGGAACCCCTTATG +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSQRGAF*LQEPLM
Trigger: CATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTTG...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCAAAGGGGAGCCTTCTaGCTCCAGGAACCCCTTATG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRQRGAF*LQEPLM
Trigger: CATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTTG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCAAAGGGGAGCCTTCTaGCTCCAGGAACCCCTTATG +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREQRGAF*LQEPLM
Trigger: CATAAGGGGTTCCTGGAGCAAGAAGGCTCCCCTTTG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTACTAGACATGTCACTTaGTTGACAGACTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLTRHVT*LTDFSQ
Trigger: CTGGGAGAAGTCTGTCAACAAAGTGACATGTCTAGT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGACTCCCCACCTCCCTaGCCTCACAGATTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFDSPPP*PHRLAC
Trigger: ACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGTC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGACTCCCCACCTCCCTaGCCTCACAGATTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDDSPPP*PHRLAC
Trigger: ACAGGCCAATCTGTGAGGCAAGGGAGGTGGGGAGTC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCCCAATGGAACATTTCTaGGATGCCTCAGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAPMEHF*DASALC
Trigger: GCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTGG...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGCCAATGGAACATTTCTaGGATGCCTCAGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEPMEHF*DASALC
Trigger: GCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTGG...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp TCTTCAAAGAAATCTCCAACAGGCATACGGGGACTGAAGCTGAAGTaGTCTCGGCGGACACTGTGTACCACGTTGCGGCTCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SSKKSPTGIRGLKLK*SRRTLCTTLRLRYL
Trigger: CAAGTACCTGAGCCGCAACGTGGTACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCCCCGTATGCCTGTTGGAGATTTCTTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
ENST00000551996.1
CDS GCA 90 bp GGCACATCTTTGGCAGGATCAAAGCCCAGCACCTTGCCAAAGCTATaGAGGAACTCCACAATGGTCAAGCAGTCTGAGAAGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: GTSLAGSKPSTLPKL*RNSTMVKQSEKAPL
Trigger: CAGTGGAGCCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGATCCTGCCAAAGATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 90 bp CACCCAGCTCCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTaGTGTTGGATCCTCCCAAACTGTGAGCTGGGAACTAGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: HPAPHCPWASTSRKG*CWILPNCELGTSKN
Trigger: ATTCTTGCTAGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549506.5
ENST00000551812.5
CDS CCA 90 bp GATCAAAGCCCAGCACCTTGCCAAAGCTATGCAGGAACTCCACAATaGTCAAGCAGTCTGAGAAGGCTCCACTGGGCAATGTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: DQSPAPCQSYAGTPQ*SSSLRRLHWAMSDQ
Trigger: CTGGTCTGACATTGCCCAGTGGAGCCTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 90 bp GAGAAGCACATGGGCCCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: EKHMGPMLEGKTNFF*GSNTSPHDITTTRS
Trigger: GCTTCTGGTAGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGGCCCATGTGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551996.1
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAAGGCAGTAGCATTATaGAGGGAAGGGCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSKAVAL*REGQSR
Trigger: CCTTGATTGCCCTTCCCTCAATAATGCTACTGCCTT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGAAGGCAGTAGCATTATaGAGGGAAGGGCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEKAVAL*REGQSR
Trigger: CCTTGATTGCCCTTCCCTCAATAATGCTACTGCCTT...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGACACTGTGTACCACGTaGCGGCTCAGGTACTTGATC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRETLCTT*RLRYLI
Trigger: GATCAAGTACCTGAGCCGCAACGTGGTACACAGTGT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCGACCCCGTTTCACCTaGGGGACTTCCTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERPRFT*GTSLVL
Trigger: TAAGACTAAGGAAGTCCCCAAGGTGAAACGGGGTCG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGACACTCTCCCCGTaGAACCTTCTGCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLTLSP*NLLPHL
Trigger: AAGATGAGGCAGAAGGTTCAACGGGGAGAGTGTCAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTGACACTCTCCCCGTaGAACCTTCTGCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLTLSP*NLLPHL
Trigger: AAGATGAGGCAGAAGGTTCAACGGGGAGAGTGTCAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCATTTCTGGCCTGCCCTaGGATAGTAGTCTGACACTC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSISGLP*DSSLTL
Trigger: GAGTGTCAGACTACTATCCAAGGGCAGGCCAGAAAT...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTTTCTGCTTTAAGCTCTaGGTCTCTTGTTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLFCFKL*VSCFRL
Trigger: TAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGAA...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGCTTTACAGGCTGGCTaGGCTTTGGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDALQAG*ALVTSS
Trigger: GGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCAAAGCCCAGCACCTaGCCAAAGCTATGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSKPST*PKLCRN
Trigger: GTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTAGGATCTCTGACACATaGTCTCTTGTCAGTGGGATC +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSRISDT*SLVSGI
Trigger: GATCCCACTGACAAGAGACAATGTGTCAGAGATCCT...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAATGAGGGTGGAGCCATaGAGCTCATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSMRVEP*SSCTRK
Trigger: CTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCAT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCTTAAGATGCCTAGGTaGCATAGACCCGGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSLKMPR*HRPGLS
Trigger: ACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAAG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGTCTCCCTCTCCGTTaGGGCTGTCCCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGLPLR*GCPSPV
Trigger: CACAGGGCTGGGACAGCCCAAACGGAGAGGGAGACC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCAGAAGAAACTCATCATaGTCACCCTTCCGGCAGACT +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLARRNSS*SPFRQT
Trigger: AGTCTGCCGGAAGGGTGACAATGATGAGTTTCTTCT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHMMCPA*PTSESS
Trigger: GGATGACTCTGAAGTAGGCAAGGCTGGGCACATCAT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREMMCPA*PTSESS
Trigger: GGATGACTCTGAAGTAGGCAAGGCTGGGCACATCAT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSMMCPA*PTSESS
Trigger: GGATGACTCTGAAGTAGGCAAGGCTGGGCACATCAT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTCTGCACCTCTTACTaGAGGAGCAAGAGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELCTSY*RSKRRE
Trigger: TTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTCTGCACCTCTTACTaGAGGAGCAAGAGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLCTSY*RSKRRE
Trigger: TTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCAAGAAATGGCCCCTTaGATCATGCCCTATCCCTAC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSQEMAP*IMPYPY
Trigger: GTAGGGATAGGGCATGATCAAAGGGGCCATTTCTTG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp CAGCTCCAAGCTGCCTACCAAGCCAGTGCCATTCTCTGCCACAACTaGAGTCATCTCCTTTTCTGCTGCCTCATCAGGATGGATACCACT +
Preference number: 5 (lower is better)
Translates to: QLQAAYQASAILCHN*SHLLFCCLIRMDTT
Trigger: AGTGGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATGACTTCAGTTGTGGCAGAGAATGGCACTGGCTTGGTAGGCAGCTTGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp GTCTCGTATGTCTTCTCTTTGGGGGACCAGCTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTGGGCTCAAAGATGGGGTCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VSYVFSLGDQLIIPS*KAGSCLGSKMGSAE
Trigger: CTCAGCTGACCCCATCTTTGAGCCCAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAGCTGGTCCCCCAAAGAGAAGACATACGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACATTTCTGGCCTGCCCTaGGATAGTAGTCTGACACTC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHISGLP*DSSLTL
Trigger: GAGTGTCAGACTACTATCCAAGGGCAGGCCAGAAAT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAATTTCTGGCCTGCCCTaGGATAGTAGTCTGACACTC +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSISGLP*DSSLTL
Trigger: GAGTGTCAGACTACTATCCAAGGGCAGGCCAGAAAT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAGGCTAGGCACATCTTaGGCAGGATCAAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRLGTS*AGSKPS
Trigger: GCTGGGCTTTGATCCTGCCAAAGATGTGCCTAGCCT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACCTGACCAGCAGGTCTaGCACCTCACCCAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERPDQQV*HLTQAV
Trigger: GACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGCATGTCCAGGGCCCGGTGTCCGGCGCGACACACTTGGGAGTTAAGTCCACTTATACTCTCCAGAGTCTaGTCAATCTCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: SMSRARCPARHTWELSPLILSRV*SISLMM
Trigger: CATCATCAATGAGATTGACAAGACTCTGGAGAGTAT...AAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGACACCGGGCCCTGGACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCTTAAGATGCCTAGGTaGCATAGACCCGGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRLKMPR*HRPGLS
Trigger: ACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAAG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTTAAGATGCCTAGGTaGCATAGACCCGGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELKMPR*HRPGLS
Trigger: ACTAAGCCCGGGTCTATGCAACCTAGGCATCTTAAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGTTAAACCAGAGTGCTaGAGGATCAGGGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRVKPEC*RIRAGF
Trigger: GAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAAC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAAGGGGAGGGAGTGGGTaGGTCCTCAGAAACTGCAGG +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRGGSG*VLRNCR
Trigger: CCTGCAGTTTCTGAGGACCAACCCACTCCCTCCCCT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACACTGGAGAACAAGGGTaGGCAGCACTAGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHTGEQG*AALGLF
Trigger: GAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACTGGAGAACAAGGGTaGGCAGCACTAGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTGEQG*AALGLF
Trigger: GAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGGTCTCCCTCTCCGTTaGGGCTGTCCCAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCGLPLR*GCPSPV
Trigger: CACAGGGCTGGGACAGCCCAAACGGAGAGGGAGACC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCCGCTGTTCCATCTGTTaGAAGAACTTACTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSRCSIC*KNLLGG
Trigger: ACCTCCCAGTAAGTTCTTCAAACAGATGGAACAGCG...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGCACAACCTCATGAGTaGGCCAGAGGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKAQPHE*ARGAPA
Trigger: TGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCACTAGACATGTCACTTaGTTGACAGACTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLATRHVT*LTDFSQ
Trigger: CTGGGAGAAGTCTGTCAACAAAGTGACATGTCTAGT...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAGGGTTGTATCTGACTaGAGTCTGGACCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFRVVSD*SLDPGQ
Trigger: CTGCCCTGGGTCCAGACTCAAGTCAGATACAACCCT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGCTGGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCGAGAGAGACACAGCCTaGTCTCCAGAGAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: GAGRGTQSRNHGDFTPPSERDTA*SPEKLF
Trigger: GAACAATTTCTCTGGAGACAAGGCTGTGTCTCTCTC...GGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGTTCCTGCTGAAAGATaGCACAGTCTGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRVPAER*HSLKRL
Trigger: CAGCCTCTTCAGACTGTGCAATCTTTCAGCAGGAAC...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCCAATGGAACATTTCTaGGATGCCTCAGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREPMEHF*DASALC
Trigger: GCAGAGAGCTGAGGCATCCAAGAAATGTTCCATTGG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAAGAAATGGCCCCTTaGATCATGCCCTATCCCTAC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSQEMAP*IMPYPY
Trigger: GTAGGGATAGGGCATGATCAAAGGGGCCATTTCTTG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTTCTACAGCTGCACTaGTGGAACATCACATGGCAA +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSFLQLH*WNITWQ
Trigger: TTGCCATGTGATGTTCCACAAGTGCAGCTGTAGAAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS GCA 90 bp GTGAGCTGGGAACTAGCAAGAATCAAAAAGCCAGTGTATGCTTCCTaGGAACCACACAGCCTGAACTGCTGTAGGGTGATGTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: VSWELARIKKPVYAS*EPHSLNCCRVMSLC
Trigger: ACACAGGGACATCACCCTACAGCAGTTCAGGCTGTGTGGTTCGCAGGAAGCATACACTGGCTTTTTGATTCTTGCTAGTTCCCAGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551812.5
CDS CCA 90 bp CTCCAAGCGCCTCTGTGTGGCCAGGGTCTTATCTGCTTTACAGGCTaGCTTGGCTTTGGTCACCTCCTCCTTTTCCTTCATTTTTACCTT +
Preference number: 5 (lower is better)
Translates to: LQAPLCGQGLICFTG*LGFGHLLLFLHFYL
Trigger: AAGGTAAAAATGAAGGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAATTCAAACTTTTCCCTaGCTGGGGGAAGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSIQTFP*LGEVHG
Trigger: CCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAAT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTTGCGGCTCAGGTACTaGATCACTTCTGGAAATTGC +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLRLRY*ITSGNC
Trigger: GCAATTTCCAGAAGTGATCAAGTACCTGAGCCGCAA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCACACTGTGTACCACGTaGCGGCTCAGGTACTTGATC +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFTLCTT*RLRYLI
Trigger: GATCAAGTACCTGAGCCGCAACGTGGTACACAGTGT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATACACTGTGTACCACGTaGCGGCTCAGGTACTTGATC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDTLCTT*RLRYLI
Trigger: GATCAAGTACCTGAGCCGCAACGTGGTACACAGTGT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATCGACCCCGTTTCACCTaGGGGACTTCCTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRPRFT*GTSLVL
Trigger: TAAGACTAAGGAAGTCCCCAAGGTGAAACGGGGTCG...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAATAGCTCAGTGATTTaGACCTTAGGTGGCCGACCT +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSNSSVI*TLGGRP
Trigger: AGGTCGGCCACCTAAGGTCAAAATCACTGAGCTATT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACGGGCGGTTGTCTGTCTaGTTCAATAGCTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHGRLSV*FNSSVI
Trigger: AATCACTGAGCTATTGAACAAGACAGACAACCGCCC...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTTCTGCTTTAAGCTCTaGGTCTCTTGTTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: PHRGYGTGAPVVPLPVVSFCFKL*VSCFRL
Trigger: TAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGAA...AGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACCTGACACATTGTCTCTaGTCAGTGGGATCTCAGACA +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHLTHCL*SVGSQT
Trigger: TGTCTGAGATCCCACTGACAAGAGACAATGTGTCAG...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTGACACATTGTCTCTaGTCAGTGGGATCTCAGACA +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSLTHCL*SVGSQT
Trigger: TGTCTGAGATCCCACTGACAAGAGACAATGTGTCAG...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGCTGACACATTGTCTCTaGTCAGTGGGATCTCAGACA +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRELTHCL*SVGSQT
Trigger: TGTCTGAGATCCCACTGACAAGAGACAATGTGTCAG...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGGATCTCTGACACATaGTCTCTTGTCAGTGGGATC +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSRISDT*SLVSGI
Trigger: GATCCCACTGACAAGAGACAATGTGTCAGAGATCCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCATGAGGGTGGAGCCATaGAGCTCATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFMRVEP*SSCTRK
Trigger: CTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCAT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGTCTTGTCAATCTCATaGATGATGAGGGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSVLSIS*MMRVEP
Trigger: TGGCTCCACCCTCATCATCAATGAGATTGACAAGAC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGCGCTGTTCCATCTGTTaGAAGAACTTACTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRRCSIC*KNLLGG
Trigger: ACCTCCCAGTAAGTTCTTCAAACAGATGGAACAGCG...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGTCGTATGTCTTCTCTTaGGGGGACCAGCTCATAATC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRSYVFS*GDQLII
Trigger: GATTATGAGCTGGTCCCCCAAAGAGAAGACATACGA...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATCGTATGTCTTCTCTTaGGGGGACCAGCTCATAATC +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSSYVFS*GDQLII
Trigger: GATTATGAGCTGGTCCCCCAAAGAGAAGACATACGA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCATCGTATGTCTTCTCTTaGGGGGACCAGCTCATAATC +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSSYVFS*GDQLII
Trigger: GATTATGAGCTGGTCCCCCAAAGAGAAGACATACGA...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAGACATGTCACTTTGTaGACAGACTTCTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSRHVTL*TDFSQA
Trigger: TGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTCT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCAAGACATGTCACTTTGTaGACAGACTTCTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRGTQSRNHGDFTPPSTSRHVTL*TDFSQA
Trigger: TGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTCT...TGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAGAAGAAACTCATCATaGTCACCCTTCCGGCAGACT +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRERRNSS*SPFRQT
Trigger: AGTCTGCCGGAAGGGTGACAATGATGAGTTTCTTCT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTCAGAGTCATCCTCGTaGAAAGTCTGGCAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRESESSS*KVWQLS
Trigger: TGACAACTGCCAGACTTTCAACGAGGATGACTCTGA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACTCAGAGTCATCCTCGTaGAAAGTCTGGCAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHSESSS*KVWQLS
Trigger: TGACAACTGCCAGACTTTCAACGAGGATGACTCTGA...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDMMCPA*PTSESS
Trigger: GGATGACTCTGAAGTAGGCAAGGCTGGGCACATCAT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCATGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSCWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGRECWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGGAACACAGAAACTTGTaGGTGTTGATGGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSEEHRNL*VLMVWF
Trigger: AAACCACACCATCAACACCAACAAGTTTCTGTGTTC...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGAACAGGAGCCCCTGTaGTTCCCTTGCCTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEEREQEPL*FPCLWS
Trigger: AGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGGGAGGGTGCAAAGGTTaGAATGCTAGATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREGGCKG*NARSQH
Trigger: ATGTTGGGATCTAGCATTCAAACCTTTGCACCCTCC...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp GCTCCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAGCTGGGAACTAGCAAGAATCAAAAA +
Preference number: 5 (lower is better)
Translates to: APHCPWASTSRKGWC*ILPNCELGTSKNQK
Trigger: TTTTTGATTCTTGCTAGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549506.5
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCTGGTGCCAGAGAGTaGAAGGGCTCCAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSGARE*KGSRES
Trigger: AGACTCTCTGGAGCCCTTCAACTCTCTGGCACCAGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATTACGGGAGAGGCTTTaGGGGATGTCACTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLRERL*GMSLKP
Trigger: CGGCTTCAGTGACATCCCCAAAAGCCTCTCCCGTAA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAGATCACTTCTGGAAATaGCTTCATCCTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSDHFWK*LHPLPT
Trigger: TGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGATC...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AATACAGGGTCACAAGCACGCACACACACACACACACACAGCGCGCGCTCTGAGTGCCTCATCTTCTTCTaGCTTTTAGCAATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: NTGSQARTHTHTHSARSECLIFF*LLAIFA
Trigger: AGCAAAGATTGCTAAAAGCAAGAAGAAGATGAGGCA...CTCAGAGCGCGCGCTGTGTGTGTGTGTGTGTGTGCGTGCTTGTGACCCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCCTTTTCTTTCTCAGCCTaGGATTTCTTCTTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PFPSTQRVWNRSPCCSLAFSFSA*DFFLAS
Trigger: GGAAGCTAAGAAGAAATCCAAGGCTGAGAAAGAAAA...GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGCTTTACAGGCTGGCTaGGCTTTGGTCACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKALQAG*ALVTSS
Trigger: GGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGACTAGACATGTCACTTaGTTGACAGACTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRTRHVT*LTDFSQ
Trigger: CTGGGAGAAGTCTGTCAACAAAGTGACATGTCTAGT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAGGAACACAAAGCAGGAACCATGGAGATTTCACTCCCCCATCCACCTCACAAATCCATAGGATTTTaGATGATGCGCCGGTACCCA +
Preference number: 5 (lower is better)
Translates to: GEEHKAGTMEISLPHPPHKSIGF*MMRRYP
Trigger: TGGGTACCGGCGCATCATCAAAAATCCTATGGATTT...GTGAGGTGGATGGGGGAGTGAAATCTCCATGGTTCCTGCTTTGTGTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAAATCCATAGGATTTTaGATGATGCGCCGGTACCCA +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRKSIGF*MMRRYP
Trigger: TGGGTACCGGCGCATCATCAAAAATCCTATGGATTT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGAAATCCATAGGATTTTaGATGATGCGCCGGTACCCA +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREKSIGF*MMRRYP
Trigger: TGGGTACCGGCGCATCATCAAAAATCCTATGGATTT...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GGAGAAAGGGATGTAGGAATAAGAGGATGTGGGGCACTGCCAAGGGCAAGGTCAAAGGAACACAGAAACTaGTTGGTGTTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GERDVGIRGCGALPRARSKEHRN*LVLMVW
Trigger: CCACACCATCAACACCAACAAGTTTCTGTGTTCCTT...TGACCTTGCCCTTGGCAGTGCCCCACATCCTCTTATTCCTACATCCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAAGGAACACAGAAACTaGTTGGTGTTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRKEHRN*LVLMVW
Trigger: CCACACCATCAACACCAACAAGTTTCTGTGTTCCTT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp AAGGGCTCCAGAGAGTCTTCACTGAGGATTGGAGTGTCTTCCAGTTaGTCAGGAAGATGTGAAGGATCATCTAAACAGCTCACTGTGGGG +
Preference number: 5 (lower is better)
Translates to: KGSRESSLRIGVSSS*SGRCEGSSKQLTVG
Trigger: CCCCACAGTGAGCTGTTTAGATGATCCTTCACATCTTCCTGATCAACTGGAAGACACTCCAATCCTCAGTGAAGACTCTCTGGAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS TCA 90 bp AGGACAGGTGGAGAGGTGGGACTGGCAAAGATAGAGGTTGATGTTTaGCTATCATCTGCCAGGAGACTGAAGGCAGTAGCATTATTGAGG +
Preference number: 5 (lower is better)
Translates to: RTGGEVGLAKIEVDV*LSSARRLKAVALLR
Trigger: CCTCAATAATGCTACTGCCTTCAGTCTCCTGGCAGATGATAGTCAAACATCAACCTCTATCTTTGCCAGTCCCACCTCTCCACCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 90 bp GCTAACTCCATCTTCATAGAGAAGAGGGCAGGGTTGAGTGACGCATaGGCTGCCACTTTTAAGGAGTCAGTTTCCTTCTTTATCACCTCC +
Preference number: 5 (lower is better)
Translates to: ANSIFIEKRAGLSDA*AATFKESVSFFITS
Trigger: GGAGGTGATAAAGAAGGAAACTGACTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTCTATGAAGATGGAGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAGGCAGTAGCATTATaGAGGGAAGGGCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKAVAL*REGQSR
Trigger: CCTTGATTGCCCTTCCCTCAATAATGCTACTGCCTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTACGGGAGAGGCTTTaGGGGATGTCACTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKLRERL*GMSLKP
Trigger: CGGCTTCAGTGACATCCCCAAAAGCCTCTCCCGTAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAATAGCTCAGTGATTTaGACCTTAGGTGGCCGACCT +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFNSSVI*TLGGRP
Trigger: AGGTCGGCCACCTAAGGTCAAAATCACTGAGCTATT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGGGCGGTTGTCTGTCTaGTTCAATAGCTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDGRLSV*FNSSVI
Trigger: AATCACTGAGCTATTGAACAAGACAGACAACCGCCC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACTGACACTCTCCCCGTaGAACCTTCTGCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERLTLSP*NLLPHL
Trigger: AAGATGAGGCAGAAGGTTCAACGGGGAGAGTGTCAG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAATGAGGGTGGAGCCATaGAGCTCATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERMRVEP*SSCTRK
Trigger: CTTCCTTGTGCATGAGCTCAATGGCTCCACCCTCAT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATGTCTTGTCAATCTCATaGATGATGAGGGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDVLSIS*MMRVEP
Trigger: TGGCTCCACCCTCATCATCAATGAGATTGACAAGAC...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCGTCTTGTCAATCTCATaGATGATGAGGGTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFVLSIS*MMRVEP
Trigger: TGGCTCCACCCTCATCATCAATGAGATTGACAAGAC...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGACCGCCCAGTTCGCTaGGCCAGAACAGTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCDRPVR*ARTVFS
Trigger: GCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCAGACATGTCACTTTGTaGACAGACTTCTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFRHVTL*TDFSQA
Trigger: TGCCTGGGAGAAGTCTGTCAACAAAGTGACATGTCT...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAGAAGAAACTCATCATaGTCACCCTTCCGGCAGACT +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDRRNSS*SPFRQT
Trigger: AGTCTGCCGGAAGGGTGACAATGATGAGTTTCTTCT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTCAGAGTCATCCTCGTaGAAAGTCTGGCAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFSESSS*KVWQLS
Trigger: TGACAACTGCCAGACTTTCAACGAGGATGACTCTGA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGATCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TCCAGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGAATGAAAACAGGTACTaGGGGAAACTGAATGGATCC +
Preference number: 5 (lower is better)
Translates to: SRRTSSLHLLLEEQEEGRNENRY*GKLNGS
Trigger: GGATCCATTCAGTTTCCCCAAGTACCTGTTTTCATT...CCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCTGTTGGGGGCTTAACTaGGACATAGTCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: LCSSNSARHLGRSTNDPFCWGLN*DIVTCR
Trigger: CCTACATGTGACTATGTCCAAGTTAAGCCCCCAACA...GAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000549884.6
CDS GCA 90 bp AGGGACTGTGTGGAGGACAGCATAATGGGGGTGAGTAGGGAAAGATaGACAACCAAGTTGGGTGAATGTGCAAGAGGAAAATACATCAGA +
Preference number: 5 (lower is better)
Translates to: RDCVEDSIMGVSRER*TTKLGECARGKYIR
Trigger: TCTGATGTATTTTCCTCTTGCACATTCACCCAACTTGGTTGTGCATCTTTCCCTACTCACCCCCATTATGCTGTCCTCCACACAGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551759.1
CDS CCA 90 bp CCACTTCACGTAAAGGTTGGTGTTGGATCCTCCCAAACTGTGAGCTaGGAACTAGCAAGAATCAAAAAGCCAGTGTATGCTTCCTGCGAA +
Preference number: 5 (lower is better)
Translates to: PLHVKVGVGSSQTVS*ELARIKKPVYASCE
Trigger: TTCGCAGGAAGCATACACTGGCTTTTTGATTCTTGCTAGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS CCA 90 bp AAACTAGAGCATTTACCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACTACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KLEHLPMLEGKTNFF*GSNTSPHDITTTRS
Trigger: GCTTCTGGTAGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTAAATGCTCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549327.1
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCTGGTGCCAGAGAGTaGAAGGGCTCCAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSGARE*KGSRES
Trigger: AGACTCTCTGGAGCCCTTCAACTCTCTGGCACCAGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAAGGACCTCATCTCTGCACCTCTTACTTGAGGAGCAAGAGGAGGGAAGGGAGTTTTCTTTCTCAGCCTaGGATTTCTTCTTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RRTSSLHLLLEEQEEGREFSFSA*DFFLAS
Trigger: GGAAGCTAAGAAGAAATCCAAGGCTGAGAAAGAAAA...CTCCCTTCCCTCCTCTTGCTCCTCAAGTAAGAGGTGCAGAGATGAGGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATCAAAGCCCAGCACCTaGCCAAAGCTATGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKSKPST*PKLCRN
Trigger: GTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGTTAAACCAGAGTGCTaGAGGATCAGGGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERVKPEC*RIRAGF
Trigger: GAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAAC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACTGGAGAACAAGGGTaGGCAGCACTAGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTGEQG*AALGLF
Trigger: GAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATAAGGAACACAGAAACTaGTTGGTGTTGATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDKEHRN*LVLMVW
Trigger: CCACACCATCAACACCAACAAGTTTCTGTGTTCCTT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATTTTCTACAGCTGCACTaGTGGAACATCACATGGCAA +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDFLQLH*WNITWQ
Trigger: TTGCCATGTGATGTTCCACAAGTGCAGCTGTAGAAA...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAATTCAAACTTTTCCCTaGCTGGGGGAAGTTCATGGG +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERIQTFP*LGEVHG
Trigger: CCCATGAACTTCCCCCAGCAAGGGAAAAGTTTGAAT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGGGCGGTTGTCTGTCTaGTTCAATAGCTCAGTGATT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERGRLSV*FNSSVI
Trigger: AATCACTGAGCTATTGAACAAGACAGACAACCGCCC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGACGCTGTTCCATCTGTTaGAAGAACTTACTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERRCSIC*KNLLGG
Trigger: ACCTCCCAGTAAGTTCTTCAAACAGATGGAACAGCG...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTCCGGCGCGACACACTaGGGAGTTAAGTCCACTTTA +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCSGATH*GVKSTL
Trigger: TAAAGTGGACTTAACTCCCAAGTGTGTCGCGCCGGA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAAGGATCTCTGACACATaGTCTCTTGTCAGTGGGATC +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKRISDT*SLVSGI
Trigger: GATCCCACTGACAAGAGACAATGTGTCAGAGATCCT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp CAGCATGTGAGGAGCATCCAACATCATACAGGGGATAGCTATCGGCAGGAAGATATACTCTCCAGAGTCTaGTCAATCTCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: QHVRSIQHHTGDSYRQEDILSRV*SISLMM
Trigger: CATCATCAATGAGATTGACAAGACTCTGGAGAGTAT...ATCTTCCTGCCGATAGCTATCCCCTGTATGATGTTGGATGCTCCTCACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGTTAAACCAGAGTGCTaGAGGATCAGGGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCVKPEC*RIRAGF
Trigger: GAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAAC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATCGTATGTCTTCTCTTaGGGGGACCAGCTCATAATC +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKSYVFS*GDQLII
Trigger: GATTATGAGCTGGTCCCCCAAAGAGAAGACATACGA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAACTAGACATGTCACTTaGTTGACAGACTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEERTRHVT*LTDFSQ
Trigger: CTGGGAGAAGTCTGTCAACAAAGTGACATGTCTAGT...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGAGAGAGACACAGCCTaGTCTCCAGAGAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKERDTA*SPEKLF
Trigger: GAACAATTTCTCTGGAGACAAGGCTGTGTCTCTCTC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGGAGGGTGCAAAGGTTaGAATGCTAGATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKGGCKG*NARSQH
Trigger: ATGTTGGGATCTAGCATTCAAACCTTTGCACCCTCC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAGATCACTTCTGGAAATaGCTTCATCCTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKDHFWK*LHPLPT
Trigger: TGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGATC...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGAGAGAGACACAGCCTaGTCTCCAGAGAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCERDTA*SPEKLF
Trigger: GAACAATTTCTCTGGAGACAAGGCTGTGTCTCTCTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp TGTCATGAAGAGAAAATCCACCTAGCTCAAGGGGGCAGTGAAGATGAGGAAAGAGAACACAGAAACTTGTaGGTGTTGATGGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: CHEEKIHLAQGGSEDEEREHRNL*VLMVWF
Trigger: AAACCACACCATCAACACCAACAAGTTTCTGTGTTC...TCTTTCCTCATCTTCACTGCCCCCTTGAGCTAGGTGGATTTTCTCTTCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTTCTACAGCTGCACTaGTGGAACATCACATGGCAA +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKFLQLH*WNITWQ
Trigger: TTGCCATGTGATGTTCCACAAGTGCAGCTGTAGAAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATTCTGCTTTAAGCTCTaGGTCTCTTGTTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKFCFKL*VSCFRL
Trigger: TAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGAA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTAAATCCATAGGATTTTaGATGATGCGCCGGTACCCA +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCKSIGF*MMRRYP
Trigger: TGGGTACCGGCGCATCATCAAAAATCCTATGGATTT...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS GCA 90 bp CCCCCACCTCAGAGGAAAAGAGGCATTCCCTTCTTTCTAGAGTTGTaGATTAAACTTGTCAAGGTCAATAAATGTAGCAAACTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: PPPQRKRGIPFFLEL*IKLVKVNKCSKLEH
Trigger: ATGCTCTAGTTTGCTACATTTATTGACCTTGACAAGTTTAATGCACAACTCTAGAAAGAAGGGAATGCCTCTTTTCCTCTGAGGTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549327.1
CDS CCA 90 bp CTTCCTTCTGCTTTAAGCTCTTGGTCTCTTGTTTCCGCTTATTTCTaGCCTGTAAACCATAAGGGAAGTCATTTCTCCTCAAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPSALSSWSLVSAYF*PVNHKGSHFSSNSE
Trigger: TTCAGAGTTTGAGGAGAAATGACTTCCCTTATGGTTTACAGGCCAGAAATAAGCGGAAACAAGAGACCAAGAGCTTAAAGCAGAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548578.1
ENST00000549763.1
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAATGCCTCATCTTCTTCTaGCTTTTAGCAATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKCLIFF*LLAIFA
Trigger: AGCAAAGATTGCTAAAAGCAAGAAGAAGATGAGGCA...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp AGAGACACAGCCTTGTCTCCAGAGAAATTGTTCCTGTGGTTTCCCAAAGACAAAATACTCTCCAGAGTCTaGTCAATCTCATTGATGATG +
Preference number: 5 (lower is better)
Translates to: RDTALSPEKLFLWFPKDKILSRV*SISLMM
Trigger: CATCATCAATGAGATTGACAAGACTCTGGAGAGTAT...TTTGTCTTTGGGAAACCACAGGAACAATTTCTCTGGAGACAAGGCTGTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTGAACACAGAAACTTGTaGGTGTTGATGGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCEHRNL*VLMVWF
Trigger: AAACCACACCATCAACACCAACAAGTTTCTGTGTTC...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS-3UTR CAA 90 bp GCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTTGCCTCATCTTCTTCTaGCTTTTAGCAATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: AVKGTQKLVGVDGVVSSCCLIFF*LLAIFA
Trigger: AGCAAAGATTGCTAAAAGCAAGAAGAAGATGAGGCA...ACAGGAAGAAACCACACCATCAACACCAACAAGTTTCTGTGTTCCTTTTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp ATGGACCTCTCCAGCTGGCCCAGGCACAAGCACACCTaGGCTGCGCTCCGGCACCGCTCGAGGGTCTGGCGC +
Preference number: 6 (lower is better)
Translates to: MDLSSWPRHKHT*AALRHRSRVWR
Trigger: GCGCCAGACCCTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTGCTTGTGCCTGGGCCAGCTGGAGAGGTCCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GCCAGGACAGCAGCCTTCTGCTGGGGTGGCTGGGCCTaGAAAGGCTGGGTGCGCAGGCGGTCACAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: ARTAAFCWGGWA*KGWVRRRSQRA
Trigger: AGCCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGGCTGCTGTCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 72 bp ACCAGGTCTCCCCCTGCCATCGGTGGCTGCCCTTCTTaGTGCGCACCTCTCTCCGCCACCCATGTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: TRSPPAIGGCPS*CAPLSATHVGG
Trigger: CCCTCCAACATGGGTGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGAGACCTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp CCTTCTGCTGGGGTGGCTGGGCCTGAAAAGGCTGGGTaGGCAGGCGGTCACAGAGGGCTGGCTCTACTCCAT +
Preference number: 6 (lower is better)
Translates to: PSAGVAGPEKAG*AGGHRGLALLH
Trigger: ATGGAGTAGAGCCAGCCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAGGCCCAGCCACCCCAGCAGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 72 bp CACACCTGGGCTGCGCTCCGGCACCGCTCGAGGGTCTaGCGCCAGACACGAATGCGAGGGGTGATCTCATAT +
Preference number: 6 (lower is better)
Translates to: HTWAALRHRSRV*RQTRMRGVISY
Trigger: ATATGAGATCACCCCTCGCATTCGTGTCTGGCGCCAGACCCTCGAGCGGTGCCGGAGCGCAGCCCAGGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GGTGTGCTAAGCAGGGCCTTCTCCAGCACAACCTCATaGGTTGGCCAGAGGGGCTCCCGCAGGTACCGCCGT +
Preference number: 6 (lower is better)
Translates to: GVLSRAFSSTTS*VGQRGSRRYRR
Trigger: ACGGCGGTACCTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGAGAAGGCCCTGCTTAGCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp CCCTGTGGGACTCTGTGGCATTTCTCCAGGGTCTCCTaGTCGCCTCTTAGGGGCCAACCCAGCCAAGGGCGT +
Preference number: 6 (lower is better)
Translates to: PCGTLWHFSRVS*SPLRGQPSQGR
Trigger: ACGCCCTTGGCTGGGTTGGCCCCTAAGAGGCGAGCAGGAGACCCTGGAGAAATGCCACAGAGTCCCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS CAA 72 bp TACCAGGTCTCCCCCTGCCATCGGTGGCTGCCCTTCTaGATGCGCACCTCTCTCCGCCACCCATGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: YQVSPCHRWLPF*MRTSLRHPCWR
Trigger: CCTCCAACATGGGTGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGAGACCTGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp TCACTGTGGTGGTTCCGCATAGAGAGTCGCCGCCGCTaGGAGGGGGAGAGCCCTTCTTCCGAGTACCGAGGC +
Preference number: 6 (lower is better)
Translates to: SLWWFRIESRRR*EGESPSSEYRG
Trigger: GCCTCGGTACTCGGAAGAAGGGCTCTCCCCCTCCAAGCGGCGGCGACTCTCTATGCGGAACCACCACAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp TACCAGGTCTCCCCCTGCCATCGGTGGCTGCCCTTCTaGATGCGCACCTCTCTCCGCCACCTGCCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: YQVSPCHRWLPF*MRTSLRHLPEK
Trigger: CTTCTCTGGCAGGTGGCGGAGAGAGGTGCGCATCAAGAAGGGCAGCCACCGATGGCAGGGGGAGACCTGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551996.1
CDS CCA 72 bp GCTAAGCAGGGCCTTCTCCAGCACAACCTCATGAGTTaGCCAGAGGGGCTCCCGCAGGTACCGCCGTTCTAC +
Preference number: 6 (lower is better)
Translates to: AKQGLLQHNLMS*PEGLPQVPPFY
Trigger: GTAGAACGGCGGTACCTGCGGGAGCCCCTCTGGCCAACTCATGAGGTTGTGCTGGAGAAGGCCCTGCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp ACCAGCAGGTCTTGCACCTCACCCAAGCTGTCACCTTaGCACAGGAGTCCCTCCTGCAGGACCCCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: TSRSCTSPKLSP*HRSPSCRTPRL
Trigger: TAGCCTGGGGGTCCTGCAGGAGGGACTCCTGTGTCAAGGTGACAGCTTGGGTGAGGTGCAAGACCTGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 72 bp ATCACAGCCAGGTCCAAAGGGTTGGTAGTTTTACGCTaGGGTGCCAGTCCCTCCCTGCCCCGACCTCGCCAG +
Preference number: 6 (lower is better)
Translates to: ITARSKGLVVLR*GASPSLPRPRQ
Trigger: CTGGCGAGGTCGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAACCCTTTGGACCTGGCTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp AGCCAGGTCCAAAGGGTTGGTAGTTTTACGCTGAGGTaGCAGTCCCTCCCTGCCCCGACCTCGCCAGGTGAT +
Preference number: 6 (lower is better)
Translates to: SQVQRVGSFTLR*QSLPAPTSPGD
Trigger: ATCACCTGGCGAGGTCGGGGCAGGGAGGGACTGGCACCTCAGCGTAAAACTACCAACCCTTTGGACCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp GATCCGAGAACTGCGCCTCCGTCCCAGGCATTCCTCTaGCCCTTCCATCTCTACTTCAGACCGCCCAGTTCG +
Preference number: 6 (lower is better)
Translates to: DPRTAPPSQAFL*PFHLYFRPPSS
Trigger: CGAACTGGGCGGTCTGAAGTAGAGATGGAAGGGCCAGAGGAATGCCTGGGACGGAGGCGCAGTTCTCGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp GGCCCTTCCATCTCTACTTCAGACCGCCCAGTTCGCTaGGCCAGAACAGTTTTCAGCCTCCGGAGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: GPSISTSDRPVR*ARTVFSLRSRP
Trigger: AGGCCGGCTCCGGAGGCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGTCTGAAGTAGAGATGGAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp CGGCCTCGGGCCCGGGCAGGAGAACTGGCAGTGGTGTaGGAGCCAGCTAACTCCATCTTCATAGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RPRARAGELAVV*EPANSIFIEKR
Trigger: CCTCTTCTCTATGAAGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGGCCCGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp TTTCGAGGTCGGCCTCGGGCCCGGGCAGGAGAACTGGCAGTGGTGTaGGAGCCAGCTAACTCCATCTTCATAGAGAAGAGGGCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: FRGRPRARAGELAVV*EPANSIFIEKRAGL
Trigger: CAACCCTGCCCTCTTCTCTATGAAGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGGCCCGAGGCCGACCTCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GCTCCCAGCCCGAAGGTTAGTGTTATGACTTGGGGATaGAGGTTGCCGGCTGCCCCCAAGGATGCCGTTGAG +
Preference number: 6 (lower is better)
Translates to: APSPKVSVMTWG*RLPAAPKDAVE
Trigger: CTCAACGGCATCCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAACACTAACCTTCGGGCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
ENST00000551959.1
CDS GCA 72 bp TCCTCCCAGCGGCTCTCGAAGAAGCGGCGCATGATGTaGCCAGCCTTGCCTACTTCAGAGTCATCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: SSQRLSKKRRMM*PALPTSESSSL
Trigger: CAACGAGGATGACTCTGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCGAGAGCCGCTGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp GCTCCAGGCTGGGACCACCCAGCTCCTCACTGTCCTTaGGCCTCCACTTCACGTAAAGGTTGGTGTTGGATC +
Preference number: 6 (lower is better)
Translates to: APGWDHPAPHCP*ASTSRKGWCWI
Trigger: GATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGGAGCTGGGTGGTCCCAGCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549506.5
ENST00000550730.1
ENST00000551812.5
CDS CCA 72 bp TCTGCTGCCTCTGCCGTTCCTCCAAGCGCCTCTGTGTaGCCAGGGTCTTATCTGCTTTACAGGCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: SAASAVPPSASV*PGSYLLYRLAW
Trigger: CCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCCACACAGAGGCGCTTGGAGGAACGGCAGAGGCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp CTGAAAAGGCTGGGTGCGCAGGCGGTCACAGAGGGCTaGCTCTACTCCATATGCCATAAGGAAGCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LKRLGAQAVTEG*LYSICHKEAAQ
Trigger: CTGCGCTGCTTCCTTATGGCATATGGAGTAGAGCCAGCCCTCTGTGACCGCCTGCGCACCCAGCCTTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 72 bp GCCCTTCCATCTCTACTTCAGACCGCCCAGTTCGCTTaGCCAGAACAGTTTTCAGCCTCCGGAGCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: ALPSLLQTAQFA*PEQFSASGAGL
Trigger: AAGGCCGGCTCCGGAGGCTGAAAACTGTTCTGGCCAAGCGAACTGGGCGGTCTGAAGTAGAGATGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp TTTTTCGAGGTCGGCCTCGGGCCCGGGCAGGAGAACTaGCAGTGGTGTTGGAGCCAGCTAACTCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: FFEVGLGPGQEN*QWCWSQLTPSS
Trigger: TGAAGATGGAGTTAGCTGGCTCCAACACCACTGCCAGTTCTCCTGCCCGGGCCCGAGGCCGACCTCGAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp CAGAACTCTTGGCTCCCAGCCCGAAGGTTAGTGTTATaGCTTGGGGATGAAGGTTGCCGGCTGCCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: QNSWLPARRLVL*LGDEGCRLPPR
Trigger: CCTTGGGGGCAGCCGGCAACCTTCATCCCCAAGTCATAACACTAACCTTCGGGCTGGGAGCCAAGAGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GAAAGCCAGGATCATGGAGTGCAGCCTTCAGCAGCCTaGCCAGCAGGTCTTGCACCTCACCCAAGCTGTCAC +
Preference number: 6 (lower is better)
Translates to: ESQDHGVQPSAA*PAGLAPHPSCH
Trigger: GTGACAGCTTGGGTGAGGTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 72 bp GTGAGGACTGAGCTGCTCAACAGGGAGCTATGGCTCTaGGTCTGGCTCAGCCAAGACAGGAAGGCTGACTGG +
Preference number: 6 (lower is better)
Translates to: VRTELLNRELWL*VWLSQDRKADW
Trigger: CCAGTCAGCCTTCCTGTCTTGGCTGAGCCAGACTCAGAGCCATAGCTCCCTGTTGAGCAGCTCAGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GTGCCTTCTCCCGGATACCTCGGGGGTGTAGGGCCTTaGGCATGGCATCCAACATCTCAGGATCTCGTATCC +
Preference number: 6 (lower is better)
Translates to: VPSPGYLGGVGP*AWHPTSQDLVS
Trigger: GGATACGAGATCCTGAGATGTTGGATGCCATGCTCAAGGCCCTACACCCCCGAGGTATCCGGGAGAAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS GCA 72 bp GGACTGACAGTAGGAGGGAAAGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGACCAGCAGGTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: GLTVGGKARIME*SLQQPDQQVLH
Trigger: GTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCCCTCCTACTGTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp TGGTCCTGCCTGGATCACCACTTTCCTGGCGACATCTaGAGGGCCCTGGTCACCGGAAAGGAAAGATTCCCA +
Preference number: 6 (lower is better)
Translates to: WSCLDHHFPGDI*RALVTGKERFP
Trigger: TGGGAATCTTTCCTTTCCGGTGACCAGGGCCCTGCAGATGTCGCCAGGAAAGTGGTGATCCAGGCAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549506.5
ENST00000550730.1
CDS GCA 72 bp CACCTGACAGTAGGAGGGAAAGCCAGGATCATGGAGTaGAGCCTTCAGCAGCCTGACCAGCAGGTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: HLTVGGKARIME*SLQQPDQQVLH
Trigger: GTGCAAGACCTGCTGGTCAGGCTGCTGAAGGCTGCACTCCATGATCCTGGCTTTCCCTCCTACTGTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551759.1
CDS CAA 72 bp CCCCATGGGACTCTGGGTACCGTTGGCCCAGAACTCTaGGCTCCCAGCCCGAAGGTTAGTGTTATGACTTGG +
Preference number: 6 (lower is better)
Translates to: PHGTLGTVGPEL*APSPKVSVMTW
Trigger: CCAAGTCATAACACTAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp AGTCCCTCCTGCAGGACCCCCAGGCTAGGCACATCTTaGGCAGGATCAAAGCCCAGCACCTTGCCAAAGCTA +
Preference number: 6 (lower is better)
Translates to: SPSCRTPRLGTS*AGSKPSTLPKL
Trigger: TAGCTTTGGCAAGGTGCTGGGCTTTGATCCTGCCAAAGATGTGCCTAGCCTGGGGGTCCTGCAGGAGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CAA 90 bp TCCTCCCAGCGGCTCTCGAAGAAGCGGCGCATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCCTCGTTGAAAGTCTGGCAGTTGTCA +
Preference number: 6 (lower is better)
Translates to: SSQRLSKKRRMMCPA*PTSESSSLKVWQLS
Trigger: TGACAACTGCCAGACTTTCAACGAGGATGACTCTGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCGAGAGCCGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp CTTGAGGTTGCTGCCAGGATTGGCAGATGGGTACTGTaGGTAGTTCCAGAGACAGTCGTAGGCCACGCTGGG +
Preference number: 6 (lower is better)
Translates to: LEVAARIGRWVL*VVPETVVGHAG
Trigger: CCCAGCGTGGCCTACGACTGTCTCTGGAACTACTCACAGTACCCATCTGCCAATCCTGGCAGCAACCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000546695.5
ENST00000549506.5
ENST00000549884.6
ENST00000551812.5
ENST00000551959.1
CDS TCA 72 bp GTGTTTCGAGGTCGACCCCGTTTGCCAGTAATTGCCTaGATCCTCGACGGGATCTCCTCTGCTGAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VFRGRPRLPVIA*ILDGISSAESC
Trigger: GCAGCTCTCAGCAGAGGAGATCCCGTCGAGGATTCAGGCAATTACTGGCAAACGGGGTCGACCTCGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp CTTCTTCCTCTTCTTCCATGCCACTGGTCTCCTCCATaGTCCGAGAACTGCGCCTCCGTCCCAGGCATTCCT +
Preference number: 6 (lower is better)
Translates to: LLPLLPCHWSPP*SENCASVPGIP
Trigger: AGGAATGCCTGGGACGGAGGCGCAGTTCTCGGATCATGGAGGAGACCAGTGGCATGGAAGAAGAGGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp AAAACTCCTCCCAGCGGCTCTCGAAGAAGCGGCGCATaGTGTGCCCAGCCTTGCCTACTTCAGAGTCATCCT +
Preference number: 6 (lower is better)
Translates to: KTPPSGSRRSGA*CAQPCLLQSHP
Trigger: AGGATGACTCTGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCGAGAGCCGCTGGGAGGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp AAATCTCCAACAGGCATACGGGGACTGAAGCTGAAGTaGTCTCGGCGGACACTGTGTACCACGTTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: KSPTGIRGLKLK*SRRTLCTTLRL
Trigger: GAGCCGCAACGTGGTACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCCCCGTATGCCTGTTGGAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
ENST00000551996.1
CDS GCA 72 bp TCTGTCGGCTTCTTCATTTCCTCCAAGATCATCTGCTaGCTCTGCCGTTCCTCCAAGCGCCTCTGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SVGFFISSKIIC*LCRSSKRLCVA
Trigger: GGCCACACAGAGGCGCTTGGAGGAACGGCAGAGGCAGCAGATGATCTTGGAGGAAATGAAGAAGCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS GCA 72 bp TTAGGGGCCAACCCAGCCAAGGGCGTGGAAGAGAACTaGACTGGAGAACAAGGGTTGGCAGCACTAGGTCTA +
Preference number: 6 (lower is better)
Translates to: LGANPAKGVEEN*TGEQGLAALGL
Trigger: TAGACCTAGTGCTGCCAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCCCTTGGCTGGGTTGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS CCA 72 bp GTGCTCACAGTAGGCCAAGTCTTCACGGGTAGAGTCTaGGCTAGGACATGTCCAGCCCCGAATCTGCAGATC +
Preference number: 6 (lower is better)
Translates to: VLTVGQVFTGRV*ARTCPAPNLQI
Trigger: GATCTGCAGATTCGGGGCTGGACATGTCCTAGCCCAGACTCTACCCGTGAAGACTTGGCCTACTGTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp TGGATCACCACTTTCCTGGCGACATCTGCAGGGCCCTaGTCACCGGAAAGGAAAGATTCCCATGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: WITTFLATSAGP*SPERKDSHVRL
Trigger: CAGCCTGACATGGGAATCTTTCCTTTCCGGTGACCAGGGCCCTGCAGATGTCGCCAGGAAAGTGGTGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549506.5
ENST00000550730.1
CDS CAA 72 bp AGTGCCTTCTCCCGGATACCTCGGGGGTGTAGGGCCTaGAGCATGGCATCCAACATCTCAGGATCTCGTATC +
Preference number: 6 (lower is better)
Translates to: SAFSRIPRGCRA*SMASNISGSRI
Trigger: GATACGAGATCCTGAGATGTTGGATGCCATGCTCAAGGCCCTACACCCCCGAGGTATCCGGGAGAAGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS CAA 72 bp CGGCTCTCGAAGAAGCGGCGCATGATGTGCCCAGCCTaGCCTACTTCAGAGTCATCCTCGTTGAAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: RLSKKRRMMCPA*PTSESSSLKVW
Trigger: CCAGACTTTCAACGAGGATGACTCTGAAGTAGGCAAGGCTGGGCACATCATGCGCCGCTTCTTCGAGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GTCCTGACCCAGGGAGACCGCCCGAAGCATCTGGGATaGGTGAAGCAGCTTTTTGCGAAAGAAAAGCTGACG +
Preference number: 6 (lower is better)
Translates to: VLTQGDRPKHLG*VKQLFAKEKLT
Trigger: CGTCAGCTTTTCTTTCGCAAAAAGCTGCTTCACTCATCCCAGATGCTTCGGGCGGTCTCCCTGGGTCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GAGCTGGGTCTAGTTTTCCCGGACTGCTATCAGGTGTaGGGACTGAGCTGCTCAACAGGGAGCTATGGCTCT +
Preference number: 6 (lower is better)
Translates to: ELGLVFPDCYQV*GLSCSTGSYGS
Trigger: AGAGCCATAGCTCCCTGTTGAGCAGCTCAGTCCTCACACCTGATAGCAGTCCGGGAAAACTAGACCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp CCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTaGTGTTGGATCCTCCCAAACTGTGAGCTGGGAACC +
Preference number: 6 (lower is better)
Translates to: PHCPWASTSRKG*CWILPNCELGT
Trigger: GGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550730.1
CDS CAA 72 bp GAATCAAAGTTAAGCCCCATGGGACTCTGGGTACCGTaGGCCCAGAACTCTTGGCTCCCAGCCCGAAGGTTA +
Preference number: 6 (lower is better)
Translates to: ESKLSPMGLWVP*AQNSWLPARRL
Trigger: TAACCTTCGGGCTGGGAGCCAAGAGTTCTGGGCCAACGGTACCCAGAGTCCCATGGGGCTTAACTTTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp ACCCCCAGGCTAGGCACATCTTTGGCAGGATCAAAGCCCAGCACCTaGCCAAAGCTATGCAGGAACTCCACAATGGTCAAGCAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: TPRLGTSLAGSKPST*PKLCRNSTMVKQSE
Trigger: CTCAGACTGCTTGACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGATCCTGCCAAAGATGTGCCTAGCCTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 72 bp CAGGGCATCTGGGCTGAGATGTTAAACCAGAGTGCTTaGGGATCAGGGCTGGATTCTGCCTCATCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: QGIWAEMLNQSA*GSGLDSASSGS
Trigger: AGAGCCTGATGAGGCAGAATCCAGCCCTGATCCTCAAGCACTCTGGTTTAACATCTCAGCCCAGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp TCCTGCAAGAAGTCCCTGTGCTTGTTAAGGTGTTTGTaGAGTGCCTTCTCCCGGATACCTCGGGGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: SCKKSLCLLRCL*SAFSRIPRGCR
Trigger: CCTACACCCCCGAGGTATCCGGGAGAAGGCACTTCACAAACACCTTAACAAGCACAGGGACTTCTTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS CCA 72 bp CCTCACTGTCCTTGGGCCTCCACTTCACGTAAAGGTTaGTGTTGGATCCTCCCAAACTGTGAGCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: PHCPWASTSRKG*CWILPNCELGT
Trigger: AGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACAGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549506.5
ENST00000551812.5
CDS CCA 72 bp CCGCCACCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACT +
Preference number: 6 (lower is better)
Translates to: PPPMLEGKTNFF*GSNTSPHDITT
Trigger: AGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp TGTCCTTGGGCCTCCACTTCACGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAGCTGGGAACCACTCCA +
Preference number: 6 (lower is better)
Translates to: CPWASTSRKGWC*ILPNCELGTTP
Trigger: TGGAGTGGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550730.1
CDS CAA 72 bp AGCCGCTCCCGCATGGTGGAAAAATCCATAGGATTTTaGATGATGCGCCGGTACCCACTCACCAAACGTGGG +
Preference number: 6 (lower is better)
Translates to: SRSRMVEKSIGF*MMRRYPLTKRG
Trigger: CCCACGTTTGGTGAGTGGGTACCGGCGCATCATCAAAAATCCTATGGATTTTTCCACCATGCGGGAGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp CCAGCCTTGCCTACTTCAGAGTCATCCTCGTTGAAAGTCTGGCAGTaGTCAAATACCAGGAGGGCATCAGCCGCAAACTCCTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: PALPTSESSSLKVWQ*SNTRRASAANSSEL
Trigger: CAGCTCAGAGGAGTTTGCGGCTGATGCCCTCCTGGTATTTGACAACTGCCAGACTTTCAACGAGGATGACTCTGAAGTAGGCAAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GCTGCCTACCAAGCCAGTGCCATTCTCTGCCACAACTaGAGTCATCTCCTTTTCTGCTGCCTCATCAGGATG +
Preference number: 6 (lower is better)
Translates to: AAYQASAILCHN*SHLLFCCLIRM
Trigger: CATCCTGATGAGGCAGCAGAAAAGGAGATGACTTCAGTTGTGGCAGAGAATGGCACTGGCTTGGTAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GTCTTCTCTTTGGGGGACCAGCTCATAATCCCTTCTTaGAAGGCAGGTAGTTGCCTGGGCTCAAAGATGGGG +
Preference number: 6 (lower is better)
Translates to: VFSLGDQLIIPS*KAGSCLGSKMG
Trigger: CCCCATCTTTGAGCCCAGGCAACTACCTGCCTTTCAAGAAGGGATTATGAGCTGGTCCCCCAAAGAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
ENST00000553222.1
CDS CCA 72 bp TGTCCTTGGGCCTCCACTTCACGTAAAGGTTGGTGTTaGATCCTCCCAAACTGTGAGCTGGGAACTAGCAAG +
Preference number: 6 (lower is better)
Translates to: CPWASTSRKGWC*ILPNCELGTSK
Trigger: CTTGCTAGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTACGTGAAGTGGAGGCCCAAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379441.7
ENST00000549506.5
ENST00000551812.5
CDS CCA 72 bp CCCTCAACTTCAGGCAGCAGCTCCACACCCAGGCAATaGTGCCTGTGGCAAGATGAAATCAAGTGCATACTA +
Preference number: 6 (lower is better)
Translates to: PSTSGSSSTPRQ*CLWQDEIKCIL
Trigger: TAGTATGCACTTGATTTCATCTTGCCACAGGCACCATTGCCTGGGTGTGGAGCTGCTGCCTGAAGTTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553222.1
CDS CCA 72 bp ACTGAAGTCATCTCCTTTTCTGCTGCCTCATCAGGATaGATACCACTGCCTACCTCCTGGGAGGGTGCAAAG +
Preference number: 6 (lower is better)
Translates to: TEVISFSAASSG*IPLPTSWEGAK
Trigger: CTTTGCACCCTCCCAGGAGGTAGGCAGTGGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATGACTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp ATGGGCCCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACT +
Preference number: 6 (lower is better)
Translates to: MGPMLEGKTNFF*GSNTSPHDITT
Trigger: AGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551996.1
CDS CAA 72 bp AAGCTGAAGTGCTCTCGGCGGACACTGTGTACCACGTaGCGGCTCAGGTACTTGATCACTTCTGGAAATTGC +
Preference number: 6 (lower is better)
Translates to: KLKCSRRTLCTT*RLRYLITSGNC
Trigger: GCAATTTCCAGAAGTGATCAAGTACCTGAGCCGCAACGTGGTACACAGTGTCCGCCGAGAGCACTTCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
ENST00000551996.1
CDS CAA 72 bp TTGACCTTAGGTGGCCGACCTCGACCCCGTTTCACCTaGGGGACTTCCTTAGTCTTAGCCTTCTCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: LTLGGRPRPRFT*GTSLVLAFSVF
Trigger: AAACACTGAGAAGGCTAAGACTAAGGAAGTCCCCAAGGTGAAACGGGGTCGAGGTCGGCCACCTAAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp AAGGGCGTGGAAGAGAACTGCACTGGAGAACAAGGGTaGGCAGCACTAGGTCTATTCATTGGCTTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: KGVEENCTGEQG*AALGLFIGLEE
Trigger: CTCCTCCAAGCCAATGAATAGACCTAGTGCTGCCAACCCTTGTTCTCCAGTGCAGTTCTCTTCCACGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000547453.1
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp GTGTTGGAGCCAGCTAACTCCATCTTCATAGAGAAGAGGGCAGGGTaGAGTGACGCATGGGCTGCCACTTTTAAGGAGTCAGTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: VLEPANSIFIEKRAG*SDAWAATFKESVSF
Trigger: GAAGGAAACTGACTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTCTATGAAGATGGAGTTAGCTGGCTCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp ATCAGGATGGATACCACTGCCTACCTCCTGGGAGGGTGCAAAGGTTaGAATGCTAGATCCCAACATAGGAGAAGTCTGTGGGGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: IRMDTTAYLLGGCKG*NARSQHRRSLWGGE
Trigger: TTCACCTCCCCACAGACTTCTCCTATGTTGGGATCTAGCATTCAAACCTTTGCACCCTCCCAGGAGGTAGGCAGTGGTATCCATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GACAGGTGGAGAGGTGGGACTGGCAAAGATAGAGGTTaGTGTTTGACTATCATCTGCCAGGAGACTGAAGGC +
Preference number: 6 (lower is better)
Translates to: DRWRGGTGKDRG*CLTIICQETEG
Trigger: GCCTTCAGTCTCCTGGCAGATGATAGTCAAACATCAACCTCTATCTTTGCCAGTCCCACCTCTCCACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS TCA 72 bp GCTGGCTGGGTCAGGGATGGTGGGAAGTCTGAAGATTaGGTTTCCATTTCTTCCTGTTCAGCGTCACTACCA +
Preference number: 6 (lower is better)
Translates to: AGWVRDGGKSED*VSISSCSASLP
Trigger: TGGTAGTGACGCTGAACAGGAAGAAATGGAAACTCAATCTTCAGACTTCCCACCATCCCTGACCCAGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551812.5
ENST00000551996.1
CDS GCA 72 bp TTGGCAGGATCAAAGCCCAGCACCTTGCCAAAGCTATaGAGGAACTCCACAATGGTCAAGCAGTCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: LAGSKPSTLPKL*RNSTMVKQSEK
Trigger: CTTCTCAGACTGCTTGACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGATCCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CCA 72 bp CAGGAAGATGTGAAGGATCATCTAAACAGCTCACTGTaGGGTCAGGGACCAGGACTGAGACCTCTTGGTGTA +
Preference number: 6 (lower is better)
Translates to: QEDVKDHLNSSL*GQGPGLRPLGV
Trigger: TACACCAAGAGGTCTCAGTCCTGGTCCCTGACCCCACAGTGAGCTGTTTAGATGATCCTTCACATCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp CTAGGCACATCTTTGGCAGGATCAAAGCCCAGCACCTaGCCAAAGCTATGCAGGAACTCCACAATGGTCAAG +
Preference number: 6 (lower is better)
Translates to: LGTSLAGSKPST*PKLCRNSTMVK
Trigger: CTTGACCATTGTGGAGTTCCTGCATAGCTTTGGCAAGGTGCTGGGCTTTGATCCTGCCAAAGATGTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CAA 72 bp CCTACTTCAGAGTCATCCTCGTTGAAAGTCTGGCAGTaGTCAAATACCAGGAGGGCATCAGCCGCAAACTCC +
Preference number: 6 (lower is better)
Translates to: PTSESSSLKVWQ*SNTRRASAANS
Trigger: GGAGTTTGCGGCTGATGCCCTCCTGGTATTTGACAACTGCCAGACTTTCAACGAGGATGACTCTGAAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp GATACCACTGCCTACCTCCTGGGAGGGTGCAAAGGTTaGAATGCTAGATCCCAACATAGGAGAAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: DTTAYLLGGCKG*NARSQHRRSLW
Trigger: CCACAGACTTCTCCTATGTTGGGATCTAGCATTCAAACCTTTGCACCCTCCCAGGAGGTAGGCAGTGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp TCTACTCCATATGCCATAAGGAAGCAGCGCAGGATCTCTGACACATaGTCTCTTGTCAGTGGGATCTCAGACACCTTCTCCCCCAAGATC +
Preference number: 6 (lower is better)
Translates to: STPYAIRKQRRISDT*SLVSGISDTFSPKI
Trigger: GATCTTGGGGGAGAAGGTGTCTGAGATCCCACTGACAAGAGACAATGTGTCAGAGATCCTGCGCTGCTTCCTTATGGCATATGGAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS TCA 72 bp GGAGAGGTGGGACTGGCAAAGATAGAGGTTGATGTTTaGCTATCATCTGCCAGGAGACTGAAGGCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: GEVGLAKIEVDV*LSSARRLKAVA
Trigger: TGCTACTGCCTTCAGTCTCCTGGCAGATGATAGTCAAACATCAACCTCTATCTTTGCCAGTCCCACCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp CTGAGCCAAACAGACAGTACAGAACCAATCTCCTTCTaGGACAGCCTCCATCTTGGGACGATGGCAGTAAAT +
Preference number: 6 (lower is better)
Translates to: LSQTDSTEPISF*DSLHLGTMAVN
Trigger: ATTTACTGCCATCGTCCCAAGATGGAGGCTGTCCCAGAAGGAGATTGGTTCTGTACTGTCTGTTTGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp TGGGCCTCCAGTTTCTTTAGGGGGCGGTTGTCTGTCTaGTTCAATAGCTCAGTGATTTTGACCTTAGGTGGC +
Preference number: 6 (lower is better)
Translates to: WASSFFRGRLSV*FNSSVILTLGG
Trigger: GCCACCTAAGGTCAAAATCACTGAGCTATTGAACAAGACAGACAACCGCCCCCTAAAGAAACTGGAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
CDS CAA 72 bp TATGCCATAAGGAAGCAGCGCAGGATCTCTGACACATaGTCTCTTGTCAGTGGGATCTCAGACACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: YAIRKQRRISDT*SLVSGISDTFS
Trigger: GGAGAAGGTGTCTGAGATCCCACTGACAAGAGACAATGTGTCAGAGATCCTGCGCTGCTTCCTTATGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549884.6
ENST00000551759.1
ENST00000551812.5
CDS CAA 72 bp ATCTCCTTTACTTGTCCTGGTTACTTTGGGAGGGACTaGCACTCACCTGACAGTAGGAGGGAAAGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: ISFTCPGYFGRD*HSPDSRRESQD
Trigger: ATCCTGGCTTTCCCTCCTACTGTCAGGTGAGTGCAAGTCCCTCCCAAAGTAACCAGGACAAGTAAAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551759.1
CDS CAA 90 bp AATGTTTCTTGGGCCTCCAGTTTCTTTAGGGGGCGGTTGTCTGTCTaGTTCAATAGCTCAGTGATTTTGACCTTAGGTGGCCGACCTCGA +
Preference number: 6 (lower is better)
Translates to: NVSWASSFFRGRLSV*FNSSVILTLGGRPR
Trigger: TCGAGGTCGGCCACCTAAGGTCAAAATCACTGAGCTATTGAACAAGACAGACAACCGCCCCCTAAAGAAACTGGAGGCCCAAGAAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000549884.6
ENST00000551812.5
CDS CAA 90 bp AGTAGTTACATCTCCTTTACTTGTCCTGGTTACTTTGGGAGGGACTaGCACTCACCTGACAGTAGGAGGGAAAGCCAGGATCATGGAGTG +
Preference number: 6 (lower is better)
Translates to: SSYISFTCPGYFGRD*HSPDSRRESQDHGV
Trigger: CACTCCATGATCCTGGCTTTCCCTCCTACTGTCAGGTGAGTGCAAGTCCCTCCCAAAGTAACCAGGACAAGTAAAGGAGATGTAACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551759.1
CDS CCA 72 bp GTGTGGCCAGGGTCTTATCTGCTTTACAGGCTGGCTTaGCTTTGGTCACCTCCTCCTTTTCCTTCATTTTTA +
Preference number: 6 (lower is better)
Translates to: VWPGSYLLYRLA*LWSPPPFPSFL
Trigger: TAAAAATGAAGGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp CATTTACCCATGTTGGAGGGGAAGACGAACTTCTTCTaGGGTAGCAATACGTCTCCTCATGACATCACCACT +
Preference number: 6 (lower is better)
Translates to: HLPMLEGKTNFF*GSNTSPHDITT
Trigger: AGTGGTGATGTCATGAGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549327.1
CDS CAA 72 bp TGTGTGGCCAGGGTCTTATCTGCTTTACAGGCTGGCTaGGCTTTGGTCACCTCCTCCTTTTCCTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: CVARVLSALQAG*ALVTSSFSFIF
Trigger: AAAAATGAAGGAAAAGGAGGAGGTGACCAAAGCCAAGCCAGCCTGTAAAGCAGATAAGACCCTGGCCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379441.7
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp ACTGAAGTCATCTCCTTTTCTGCTGCCTCATCAGGATaGATACCACTGCCTACCTCCTCAAAATTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: TEVISFSAASSG*IPLPTSSKFWS
Trigger: TGACCAGAATTTTGAGGAGGTAGGCAGTGGTATCCATCCTGATGAGGCAGCAGAAAAGGAGATGACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379441.7
CDS CCA 72 bp ATCTTCATAGAGAAGAGGGCAGGGTTGAGTGACGCATaGGCTGCCACTTTTAAGGAGTCAGTTTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: IFIEKRAGLSDA*AATFKESVSFF
Trigger: AAAGAAGGAAACTGACTCCTTAAAAGTGGCAGCCCATGCGTCACTCAACCCTGCCCTCTTCTCTATGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000549787.5
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp GTAAAGGTTGGTGTTGGATCCTCCCAAACTGTGAGCTaGGAACTAGCAAGAATCAAAAAGCCAGTGTATGCT +
Preference number: 6 (lower is better)
Translates to: VKVGVGSSQTVS*ELARIKKPVYA
Trigger: AGCATACACTGGCTTTTTGATTCTTGCTAGTTCCCAGCTCACAGTTTGGGAGGATCCAACACCAACCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379441.7
ENST00000551812.5
CDS CAA 90 bp CTTGTCAAGGTCAATAAATGTAGCAAACTAGAGCATTTACCCATGTaGGAGGGGAAGACGAACTTCTTCTGGGGTAGCAATACGTCTCCT +
Preference number: 6 (lower is better)
Translates to: LVKVNKCSKLEHLPM*EGKTNFFWGSNTSP
Trigger: AGGAGACGTATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTAAATGCTCTAGTTTGCTACATTTATTGACCTTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549327.1
CDS TCA 72 bp AGAGAGTCTTCACTGAGGATTGGAGTGTCTTCCAGTTaGTCAGGAAGATGTGAAGGATCATCTAAACAGCTC +
Preference number: 6 (lower is better)
Translates to: RESSLRIGVSSS*SGRCEGSSKQL
Trigger: GAGCTGTTTAGATGATCCTTCACATCTTCCTGATCAACTGGAAGACACTCCAATCCTCAGTGAAGACTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379441.7
ENST00000547647.1
ENST00000549884.6
ENST00000551812.5
CDS CCA 72 bp GCTTTAAGCTCTTGGTCTCTTGTTTCCGCTTATTTCTaGCCTGTAAACCATAAGGGAAGTCATTTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ALSSWSLVSAYF*PVNHKGSHFSS
Trigger: TGAGGAGAAATGACTTCCCTTATGGTTTACAGGCCAGAAATAAGCGGAAACAAGAGACCAAGAGCTTAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548578.1
ENST00000549763.1
CDS CAA 72 bp GTCAATAAATGTAGCAAACTAGAGCATTTACCCATGTaGGAGGGGAAGACGAACTTCTTCTGGGGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: VNKCSKLEHLPM*EGKTNFFWGSN
Trigger: ATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTAAATGCTCTAGTTTGCTACATTTATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549327.1
CDS TCA 72 bp TGGGGAGCAGAGTTCAAAATCCCTGAAGTAGTAGTGTaGGATACAGTAGATAAGCCATTAACATTCACATCC +
Preference number: 6 (lower is better)
Translates to: WGAEFKIPEVVV*DTVDKPLTFTS
Trigger: GGATGTGAATGTTAATGGCTTATCTACTGTATCTCACACTACTACTTCAGGGATTTTGAACTCTGCTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379441.7
ENST00000546695.5
ENST00000549506.5
ENST00000549884.6
ENST00000550730.1
ENST00000551812.5
ENST00000551959.1
CDS CAA 90 bp TCCTTCAGTTTTTCCTGCTTTGTCTTTCCTTTTTCTTTCTCAGCCTaGGATTTCTTCTTAGCTTCCTTCTGCTTTAAGCTCTTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: SFSFSCFVFPFSFSA*DFFLASFCFKLLVS
Trigger: AGAGACCAAGAGCTTAAAGCAGAAGGAAGCTAAGAAGAAATCCAAGGCTGAGAAAGAAAAAGGAAAGACAAAGCAGGAAAAACTGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000379441.7
ENST00000547650.1
ENST00000548578.1
ENST00000549763.1
ENST00000549884.6
ENST00000551812.5