RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAZ1B (Homo sapiens)

Ensembl gene IDs: ENSG00000009954

Ensembl transcript IDs: ENST00000339594.9, ENST00000404251.1, ENST00000466844.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTTCCAGGTTCTaGGTCTTCCTCGCTCGCCTCCCTCCCACCCTCCCTAGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: GMTGVSGLPVISSRF*VFLARLPPTLPSCP
Trigger: GGGACAGCTAGGGAGGGTGGGAGGGAGGCGAGCGAGGAAGACCAAGAACCTGGAAGAGATCACAGGGAGTCCAGAAACGCCTGTCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCAGCGGGAAGGGCTTaGGGCCCAGGAGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPAGRA*GPGAAP
Trigger: TGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCCGCGCGACAGTCATaGAGCGGAACGCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIAARQS*SGTPRR
Trigger: GCGCCGTGGCGTTCCGCTCCATGACTGTCGCGCGGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIECAGW*RAAPLR
Trigger: CCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGGCAGTAGCGGGCTaGCAAGCTGGGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILAVAG*QAGHCH
Trigger: GTGGCAGTGCCCAGCTTGCCAGCCCGCTACTGCCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGCAGCTCCAGGCTTTaGCTCCGGGAGCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICSSRL*LRELRL
Trigger: CAAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCGGGCTGGCAAGCTaGGCACTGCCACTCACCATC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISGLAS*ALPLTI
Trigger: GATGGTGAGTGGCAGTGCCCAGCTTGCCAGCCCGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCTCCTGGTAGAGTGTaGCTTCTTACCCGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPPGRV*LLTRAP
Trigger: CGGCGCCCGGGTAAGAAGCCACACTCTACCAGGAGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGGTGGTGCCTTGGGCTaGGACCTCCTGGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIGGALG*DLLVEC
Trigger: ACACTCTACCAGGAGGTCTCAGCCCAAGGCACCACC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAGCTCCGCTTGGTCTaGAGCACCAGCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIELRLV*STSSST
Trigger: GGTGGATGAGCTGGTGCTTCAGACCAAGCGGAGCTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCATACTCTTCCCGGGTaGGGAAGGCCTCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIHTLPG*GRPPEC
Trigger: ACACTCAGGAGGCCTTCCGCACCCGGGAAGAGTATG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTCACTGTGCTTCCCTaGTTTCTTGGCAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVTVLP*FLGRWA
Trigger: GGCCCACCTGCCAAGAAACCAGGGAAGCACAGTGAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCCCAAACAGCGTGTTaGGCAGCCCTTCAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPQTAC*AALQGY
Trigger: ATACCCCTGAAGGGCTGCCCAACACGCTGTTTGGGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCCGGGAGCTCCGCTTaGTCTGAAGCACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISGSSA*SEAPAH
Trigger: ATGAGCTGGTGCTTCAGACCAAGCGGAGCTCCCGGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGTCCAACGGCCTCTaGCTCACTGTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILSNGL*LTVPFI
Trigger: GATGAAGGGGACAGTGAGCCAGAGGCCGTTGGACAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTGTCTTCGTCCCCTaGACTGTCCAACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISVFVP*TVQRPL
Trigger: CAGAGGCCGTTGGACAGTCCAGGGGACGAAGACAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCCTCGGACTCCTCCTaGAAACTCTCAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPSDSS*KLSEGR
Trigger: CCTCCCTTCTGAGAGTTTCCAGGAGGAGTCCGAGGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCCTCGCTTTCCTCCTaGACATCAGATCTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPSLSS*TSDLRK
Trigger: CTTGCGCAGATCTGATGTTCAGGAGGAAAGCGAGGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCACTGAGTATGTCATaGGGATCCGGTGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIALSMS*GSGGTV
Trigger: CACTGTGCCACCGGATCCTCATGACATACTCAGTGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCTGAACATCAGATCTaGGCAAGCAGAGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPEHQI*ASRAAP
Trigger: TGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCATCCACAGGTGGTaGCTTGGGCTGAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIIIHRW*LGLRPP
Trigger: AGGAGGTCTCAGCCCAAGGCACCACCTGTGGATGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACTTCTTGCGCTTCCTaGGGACATATGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITSCAS*GHMGGQ
Trigger: CTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCCTTACCACGGCCCTaGCTCTCTACTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPLPRP*LSTSSV
Trigger: GACAGAAGAAGTAGAGAGGCAGGGCCGTGGTAAGGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACCCCCAGAATTCCGTaGGGCTCGTGTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITPRIP*GSCHLL
Trigger: CAGAAGATGACACGAGCCCCACGGAATTCTGGGGGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCAGCACGTGCATCCTaGAGAAAGTCTGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIAARAS*RKSELP
Trigger: GGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGCCACTCACCATCTaGTACTTCATAGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILPLTI*YFIEGR
Trigger: CCGGCCCTCTATGAAGTACCAGATGGTGAGTGGCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCATCATCCACAGGTaGTGCCTTGGGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISIIHR*CLGLRP
Trigger: AGGTCTCAGCCCAAGGCACCACCTGTGGATGATGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTCTTCCAGGTTCTTaGTCTTCCTCGCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISLPGS*SSSLAS
Trigger: GGAGGCGAGCGAGGAAGACCAAGAACCTGGAAGAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAGCCGCACCAGCTCTaGAACAGAATGCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIEPHQL*NRMQSQ
Trigger: TTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATTGTCATCTGTGTCTaGGCCCTCGCTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIIVICV*ALAFLL
Trigger: CAGGAGGAAAGCGAGGGCTCAGACACAGATGACAAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCCTGGAGAAAGTCTaGGCTTCCCGGATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIILEKV*ASRIAV
Trigger: GACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTGTTCTGCACTGTCTaGAAGTCCATGGGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILFCTV*KSMGCV
Trigger: CACGCACCCCATGGACTTTCAGACAGTGCAGAACAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACTGATACTGTCACCTaGGAGGAAGACGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITDTVT*EEDGGR
Trigger: TCTTCCCCCGTCTTCCTCTCAGGTGACAGTATCAGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGAATTCCACCACCATaGCCACATCCCCAAACAGCG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRIPPP*PHPQTA
Trigger: CGCTGTTTGGGGATGTGGCCATGGTGGTGGAATTCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTCATGAGGATCCGGTaGCACAGTGCTGTCAAGATC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVMRIR*HSAVKI
Trigger: GATCTTGACAGCACTGTGCCACCGGATCCTCATGAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTGCTTGCCCCGGATaGTCTTTCGAGGTCTCAATC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICACPG*SFEVSI
Trigger: GATTGAGACCTCGAAAGACCATCCGGGGCAAGCACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGCGGACATATGGGTaGCCAGGAAGGTGTTTATGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILRTYG*PGRCLC
Trigger: GCATAAACACCTTCCTGGCCACCCATATGTCCGCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTCCTGCGGACATATaGGTGGCCAGGAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILPADI*VARKVF
Trigger: AAACACCTTCCTGGCCACCCATATGTCCGCAGGAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTCTTGGATTTCTTTaGGGGCTTCCTGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICLGFL*GLPVWG
Trigger: TCCCCAGACAGGAAGCCCTCAAAGAAATCCAAGACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGGCGAGCCACTCAATaGCTTCTTCAAGTGTACGTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIWRATQ*LLQVYV
Trigger: CACGTACACTTGAAGAAGTCATTGAGTGGCTCGCCA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTTGTAGTATGCAATaGGGTGTAGGGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILCSMQ*GVGLQE
Trigger: CTCCTGCAGCCCTACACCTCATTGCATACTACAAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCATGTGGTCTTGCACTaGGTATGTCATGAGGATCCG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIHVVLH*VCHEDP
Trigger: CGGATCCTCATGACATACTCAGTGCAAGACCACATG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCGGACATATCCCACTTaGTACAGGCATCAAGCATCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRTYPT*YRHQAS
Trigger: GGATGCTTGATGCCTGTATCAAGTGGGATATGTCCG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGTCCATGGGGTGCGTaGTCACATCATAGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISPWGA*SHHSSP
Trigger: AGGACTACTATGATGTGATCACGCACCCCATGGACT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTCTGGACTCCCTGTaGTCTCTTCCAGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLDSL*SLPGSW
Trigger: CCAAGAACCTGGAAGAGATCACAGGGAGTCCAGAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGCTTCCAGTACTCTTaGACGTCCAAATGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICFQYS*TSKCAH
Trigger: GTGAGCGCATTTGGACGTGCAAGAGTACTGGAAGCA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAACTCTGCAGACATCTaGTGTCTGGTCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVINSADI*CLVSMW
Trigger: CCACATGGAGACCAGACAGCAGATGTCTGCAGAGTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGAGCTTCCCGGATTaGTGTCTTCCATTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILSFPD*CLPFLQ
Trigger: CTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCTCTTCACACTTCTaGAGCTCCAGGCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIISSHF*SSRLCL
Trigger: GAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCTTAGCACATGGCTaGCACGGCAGTTGTAAACCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISLAHG*HGSCKP
Trigger: AGGTTTACAACTGCCGTGGCAGCCATGTGCTAAGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCAGACATCTGCTGTCTaGTCTCCATGTGGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIQTSAV*SPCGLA
Trigger: TGCAAGACCACATGGAGACCAGACAGCAGATGTCTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGATGACAGGCGTTTCTaGACTCCCTGTGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIDDRRF*TPCDLF
Trigger: GAAGAGATCACAGGGAGTCCAGAAACGCCTGTCATC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCCTTGTGTGTTAGCTaGCTGCTTCCAGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISLCVS*LLPVLL
Trigger: CAAGAGTACTGGAAGCAGTCAGCTAACACACAAGGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAGGCTGTGTTATGGTaGACCATTTCCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIEAVLW*TISRTS
Trigger: GCTTGTTCTGGAAATGGTTCACCATAACACAGCCTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTTCTCTTTGTCACTTaGTGGAGAATCACAGGCACC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVLFVT*WRITGT
Trigger: GGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTGAGTTCTTCACTTTaGGTGGCGAGCCACTCAATG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILSSSL*VASHSM
Trigger: CATTGAGTGGCTCGCCACTCAAAGTGAAGAACTCAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGGGTATCCACCAATCTaGATGCTGGAAGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIGYPPI*MLEGFC
Trigger: GCAAAAACCTTCCAGCATTCAGATTGGTGGATACCC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTATGACACTGGCCTaGAGGGCAATCACACACTCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFMTLA*RAITHS
Trigger: TGAGTGTGTGATTGCCCTTCAGGCCAGTGTCATAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTTGCACGTCCAAATaGGCTCACTGTACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISCTSK*AHCTFP
Trigger: TGGAAAGGTACAGTGAGCGCATTTGGACGTGCAAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTGTGTTAGCTGACTaGTTCCAGTACTCTTGCACG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICVLAD*FQYSCT
Trigger: CGTGCAAGAGTACTGGAAGCAGTCAGCTAACACACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCTACGACCCAAGGTaGATTTTCACCAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFYDPR*IFTSTS
Trigger: GCTGGTACTGGTGAAAATGCACCTTGGGTCGTAGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAAAGGCTTGTCACTGTaGTTCCCTGGTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIKGLSL*FPGFLA
Trigger: TGCCAAGAAACCAGGGAAGCACAGTGACAAGCCTTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTGTCCATTCAGGATaGCTTTGCTTCTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISVHSG*LCFCPL
Trigger: CAAAGGGCAGAAGCAAAGGCATCCTGAATGGACAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTGTCATCTTCTGCGTaGCTTTGGCCATATCCAACA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVSSSA*LWPYPT
Trigger: TGTTGGATATGGCCAAAGGCACGCAGAAGATGACAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTCTCCATGTGGTCTTaGACTGAGTATGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVSMWS*TEYVMR
Trigger: CCTCATGACATACTCAGTGCAAGACCACATGGAGAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCCTTCCACAACTCTaGAGACATCTGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLPQL*RHLLSG
Trigger: ACCAGACAGCAGATGTCTGCAGAGTTGTGGAAGGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCTTTCTCAGCAGCTaGTTTGTGCTTCCGTATTCG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISFLSS*FVLPYS
Trigger: CGAATACGGAAGCACAAAGCAGCTGCTGAGAAAGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCAGGAAGGTGTTTATaGAACAGAGCCACTAGACAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPGRCL*NRATRH
Trigger: GTGTCTAGTGGCTCTGTTGCATAAACACCTTCCTGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGTAGGAAGTTTTCGTaGCGATCTACGTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISRKFS*RSTCSV
Trigger: GACAGAGCACGTAGATCGCCACGAAAACTTCCTACT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTCTGGTCTCCATGTaGTCTTGCACTGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICLVSM*SCTEYV
Trigger: GACATACTCAGTGCAAGACCACATGGAGACCAGACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGGTTCTGTCCTTGTTTaGGTGTGGTTGTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIGSVLV*VWLSLQ
Trigger: CTGTAGAGACAACCACACCCAAACAAGGACAGAACC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACCGGAGGAAATTATTaGAAAATGGCGGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITGGNY*KMAGDS
Trigger: GGAATCTCCCGCCATTTTTCAATAATTTCCTCCGGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCAAGTAAAAAGTCACTaGACTTGCTGGGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIQVKSH*TCWAES
Trigger: ACTCTCTGCCCAGCAAGTTCAGTGACTTTTTACTTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGGAGGCAGATGTTTATaGGGTTTACTAGAGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIGGRCL*GLLEVL
Trigger: TAGGACCTCTAGTAAACCTCATAAACATCTGCCTCC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTTGCAGTGATGGTTaGATCGGTAGTCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILCSDG*IGSQCC
Trigger: ACAGCATTGACTACCGATTCAACCATCACTGCAAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCGGGCTTCAAATTCTaGTGTTTCTTCCACATATCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPGFKF*CFFHIS
Trigger: GGATATGTGGAAGAAACATCAGAATTTGAAGCCCGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTGCTTGGGAGCCATaGAGCCTTGGAGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFAWEP*SLGEIS
Trigger: AGAAATTTCTCCAAGGCTTCATGGCTCCCAAGCAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCGTGGCGATCTACGTaGTCTGTCATTAATACTCTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISWRST*SVINTL
Trigger: GAGAGTATTAATGACAGAGCACGTAGATCGCCACGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACGAATCAAGCTGTCTaGTGGCACGTTACTGATGAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITNQAV*WHVTDD
Trigger: ATCATCAGTAACGTGCCAGCAGACAGCTTGATTCGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAAAGCCACCCTTATCTaGACTCAAGGCTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIKATLI*TQGFHK
Trigger: CTTATGGAAGCCTTGAGTGCAGATAAGGGTGGCTTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCTCTGAAACAGAATaGAGAGTCAAGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISSETE*RVKGIS
Trigger: GGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCAGCAGCTGCTTTGTaGTTCCGTATTCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISAAAL*FRIRSS
Trigger: AGAAGAACGAATACGGAAGCACAAAGCAGCTGCTGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTCTCCAGTGCAGATaGAACCTTTGCTTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLQCR*NLCFLY
Trigger: GTAGAGGAAGCAAAGGTTGCATCTGCACTGGAGAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTCCATTTCTCCAGTaGAGATGCAACCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILPFLQ*RCNLCF
Trigger: GAAGCAAAGGTTGCATCTGCACTGGAGAAATGGAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCACCTAGCATTTTCTaGGGACATATCCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIAPSIF*GHIPLD
Trigger: ATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTATCAGGAAACTTCTTaGGCTTCCTGCGGACATATG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIYQETS*ASCGHM
Trigger: CATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCTGAGCAATCTGACTaGAGTTCTCTTTGTCACTTG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPEQSD*SSLCHL
Trigger: CAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTTCTGCGTGCCTTTaGCCATATCCAACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISSACL*PYPTKS
Trigger: TGACTTTGTTGGATATGGCCAAAGGCACGCAGAAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACTTCGCAATTCTTCTaGGAGACGAGCTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITSQFF*ETSSIF
Trigger: GAAGATAGAGCTCGTCTCCCAGAAGAATTGCGAAGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTGCCAGTTAACTCTTaGTCCTCATACCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILPVNS*SSYRFC
Trigger: ACAGAAGCGGTATGAGGACCAAGAGTTAACTGGCAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCGTTCTTCTTCAGCTTaGCGTTCCAGTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRSSSA*RSSFTF
Trigger: GAAAGTGAAACTGGAACGCCAAGCTGAAGAAGAACG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTCCTTGTTTGGGTGTaGTTGTCTCTACAGCAACTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVLVWV*LSLQQL
Trigger: AAGTTGCTGTAGAGACAACCACACCCAAACAAGGAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCAGCATATTTGGTCATaGTCTCCAACCAAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIQHIWS*SPTKQY
Trigger: ATACTGCTTGGTTGGAGATCATGACCAAATATGCTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCAGTAATAGGATACTaGGCATCTGGTAAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIAVIGY*ASGKSS
Trigger: GCTACTTTTACCAGATGCTCAGTATCCTATTACTGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCCTGGAACTTCATCTaGGAAGAGCCAGTATCTATT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISWNFI*EEPVSI
Trigger: AATAGATACTGGCTCTTCTCAGATGAAGTTCCAGGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATGCTGGAAGGTTTTTaGCAGTTAACTCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIMLEGF*QLTLGP
Trigger: AGGACCAAGAGTTAACTGGCAAAAACCTTCCAGCAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCCACCAATCTGAATaGTGGAAGGTTTTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIIHQSE*WKVFAS
Trigger: ACTGGCAAAAACCTTCCAGCATTCAGATTGGTGGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGTTTTCTTCTCTTTTaGTTGGGAGCCATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISFLLF*LGAMKP
Trigger: AGGCTTCATGGCTCCCAAGCAAAAGAGAAGAAAACT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCAGATTTCTTCTCAGTaGCCTCTTCATCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIQISSQ*PLHPLS
Trigger: AGAAAGTGGATGAAGAGGCCACTGAGAAGAAATCTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAATCAAGCTGTCTGCTaGCACGTTACTGATGATCTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVINQAVC*HVTDDL
Trigger: AAGATCATCAGTAACGTGCCAGCAGACAGCTTGATT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTATCTCCTTATTTGGTaGGCGCTCTGTACGAATCAA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIYLLIW*ALCTNQ
Trigger: TTGATTCGTACAGAGCGCCCACCAAATAAGGAGATA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAACTATCTCCTTATTTaGTGGGCGCTCTGTACGAAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVINYLLI*WALCTN
Trigger: ATTCGTACAGAGCGCCCACCAAATAAGGAGATAGTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTACTTCACGATCTTGTaGAGGATCTCTTCACACTTC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIYFTIL*RISSHF
Trigger: GAAGTGTGAAGAGATCCTCCACAAGATCGTGAAGTA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCCAGCCTTTTTCAATaGATAATCCTGGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPSLFQ*IILELH
Trigger: ATGAAGTTCCAGGATTATTCATTGAAAAAGGCTGGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTGTTGCAACTTCAATaGGATCACTACGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILLQLQ*DHYEGS
Trigger: ACTTCCTTCGTAGTGATCTCATTGAAGTTGCAACAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTACAGCAACTTCTGTTaGTGTTCCATGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIYSNFC*CSMLCV
Trigger: AACACACAACATGGAACAGCAACAGAAGTTGCTGTA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGCAGATGCAACCTTTaGTTCCTCTACCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICRCNL*FLYHFL
Trigger: AAGAAAATGGTAGAGGAAGCAAAGGTTGCATCTGCA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATTTGGAATTCCCTGTaGATTTCTGTCCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIIWNSL*ISVHSG
Trigger: TCCTGAATGGACAGAAATCCACAGGGAATTCCAAAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCTTCTGTATCTACTTaGGGCTCAAACTTCACAATT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIASVST*GSNFTI
Trigger: AATTGTGAAGTTTGAGCCCCAAGTAGATACAGAAGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTCAGACAAAACAGGTaGAAGGCTTTATTACACTCA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILRQNR*KALLHS
Trigger: TGAGTGTAATAAAGCCTTCCACCTGTTTTGTCTGAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCACATCATATTTGTaGGGCAGAAATTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFTSYL*GRNFGG
Trigger: TCCTCCAAAATTTCTGCCTCACAAATATGATGTGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCTTCAAGTGTACGTaGCACCATAACTTAGGATTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFFKCT*HHNLGF
Trigger: AAATCCTAAGTTATGGTGTCACGTACACTTGAAGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGATTTGGAATTCTTTaGGTTCTTCACTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRFGIL*VLHFEW
Trigger: CCACTCAAAGTGAAGAACTCAAAGAATTCCAAATCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR TCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCCTCAGTTTTTGCTaGATCTTCACTTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLSFC*IFTLEF
Trigger: AAACTCCAAAGTGAAGATTCAGCAAAAACTGAGGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCTCGTAATGCATTATaGCGTATAAAGTATCGAACT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIARNAL*RIKYRT
Trigger: AGTTCGATACTTTATACGGCATAATGCATTACGAGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTAAAAGCTCCTGGTTaGCATCACAAGATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILKAPG*HHKILD
Trigger: GTCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCATTGGTAAACACTTaGTTCATGTCAGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIALVNT*FMSVRN
Trigger: GTTTCTTACTGACATGAAGCAAGTGTTTACCAATGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCCAGTATCTATTATaGTTTCGATCTGTGCCAATA +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISQYLL*FRSVPI
Trigger: TATTGGCACAGATCGAAACCATAATAGATACTGGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR GCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTTCCTATCAGTTTTaGCTAACCCATTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFSYQF*LTHSQL
Trigger: AAGTTGAGAATGGGTTAGGCAAAACTGATAGGAAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CCA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAAGTTTAAAAGCTCCTaGTTGCCATCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIKFKSS*LPSQDF
Trigger: AAAATCTTGTGATGGCAACCAGGAGCTTTTAAACTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS GCA 90 bp AGAGCGGCTCCTCTCCGGGCAACGGCTTCACCAGCGGGAAGGGCTTaGGGCCCAGGAGCGGCGCCATCGCGGCGGCGGCGGTGGGGACTG +
Preference number: 5 (lower is better)
Translates to: RAAPLRATASPAGRA*GPGAAPSRRRRWGL
Trigger: CAGTCCCCACCGCCGCCGCCGCGATGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGGAGCCGCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp CATACTCTTCCCGGGTGCGGAAGGCCTCCTGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGGGCAACGGCTTCACCAGCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HTLPGCGRPPECAGW*RAAPLRATASPAGR
Trigger: CCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGGAAGAGTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp GTTCCTGCCACGGGAGTTGCGCCTGGCAGTAGCGGGCTGGCAAGCTaGGCACTGCCACTCACCATCTGGTACTTCATAGAGGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: VPATGVAPGSSGLAS*ALPLTIWYFIEGRP
Trigger: AGGCCGGCCCTCTATGAAGTACCAGATGGTGAGTGGCAGTGCCCAGCTTGCCAGCCCGCTACTGCCAGGCGCAACTCCCGTGGCAGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp ACCAGCTCATCCACCTCAGCATCATCCACAGGTGGTGCCTTGGGCTaGGACCTCCTGGTAGAGTGTGGCTTCTTACCCGGGCGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: TSSSTSASSTGGALG*DLLVECGFLPGRRP
Trigger: AGGCCGGCGCCCGGGTAAGAAGCCACACTCTACCAGGAGGTCTCAGCCCAAGGCACCACCTGTGGATGATGCTGAGGTGGATGAGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp CCTGGCAGTAGCGGGCTGGCAAGCTGGGCACTGCCACTCACCATCTaGTACTTCATAGAGGGCCGGCCTCAGACAAAACAGGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PGSSGLASWALPLTI*YFIEGRPQTKQVEG
Trigger: GCCTTCCACCTGTTTTGTCTGAGGCCGGCCCTCTATGAAGTACCAGATGGTGAGTGGCAGTGCCCAGCTTGCCAGCCCGCTACTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp GGTCTGAAGCACCAGCTCATCCACCTCAGCATCATCCACAGGTGGTaGCTTGGGCTGAGACCTCCTGGTAGAGTGTGGCTTCTTACCCGG +
Preference number: 5 (lower is better)
Translates to: GLKHQLIHLSIIHRW*LGLRPPGRVWLLTR
Trigger: CCGGGTAAGAAGCCACACTCTACCAGGAGGTCTCAGCCCAAGGCACCACCTGTGGATGATGCTGAGGTGGATGAGCTGGTGCTTCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp CCCTTACCACGGCCCTGCCTCTCTACTTCTTCTGTCTTCGTCCCCTaGACTGTCCAACGGCCTCTGGCTCACTGTCCCCTTCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: PLPRPCLSTSSVFVP*TVQRPLAHCPLHLQ
Trigger: CTGAAGATGAAGGGGACAGTGAGCCAGAGGCCGTTGGACAGTCCAGGGGACGAAGACAGAAGAAGTAGAGAGGCAGGGCCGTGGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCACCAGCGGGAAGGGCTaGCGGCCCAGGAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVITSGKG*RPRSGA
Trigger: GGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS CCA 90 bp ACAGGCTCCCTGAAGGGCCAGCTGAAGCGGTACTTCACGATCTTGTaGAGGATCTCTTCACACTTCTGCAGCTCCAGGCTTTGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: TGSLKGQLKRYFTIL*RISSHFCSSRLCLR
Trigger: CCGGAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACAAGATCGTGAAGTACCGCTTCAGCTGGCCCTTCAGGGAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCCTGCCACGGGAGTaGCGCCTGGCAGTAGCGGGC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLPRE*RLAVAG
Trigger: GCCCGCTACTGCCAGGCGCAACTCCCGTGGCAGGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGCAGCTCCAGGCTTaGCCTCCGGGAGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILQLQA*PPGAPL
Trigger: AAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS TCA 90 bp CAGGCATCAAGCATCCCAAGCAGCACGTGCATCCTGGAGAAAGTCTaGGCTTCCCGGATTGCTGTCTTCCATTTCTCCAGTGCAGATGCA +
Preference number: 5 (lower is better)
Translates to: QASSIPSSTCILEKV*ASRIAVFHFSSADA
Trigger: TGCATCTGCACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGCTTGGGATGCTTGATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp CCTTGTGTGTTAGCTGACTGCTTCCAGTACTCTTGCACGTCCAAATaGGCTCACTGTACCTTTCCAAGCGGGCTTCATACTCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PCVLADCFQYSCTSK*AHCTFPSGLHTLPG
Trigger: CCCGGGAAGAGTATGAAGCCCGCTTGGAAAGGTACAGTGAGCGCATTTGGACGTGCAAGAGTACTGGAAGCAGTCAGCTAACACACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp TGTCATCTGTGTCTGAGCCCTCGCTTTCCTCCTGAACATCAGATCTaGGCAAGCAGAGCCGCACCAGCTCTGAAACAGAATGCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: CHLCLSPRFPPEHQI*ASRAAPALKQNAES
Trigger: TGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGGAGGAAAGCGAGGGCTCAGACACAGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp CCCAAGCAGCACGTGCATCCTGGAGAAAGTCTGAGCTTCCCGGATTaGTGTCTTCCATTTCTCCAGTGCAGATGCAACCTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PKQHVHPGESLSFPD*CLPFLQCRCNLCFL
Trigger: GAGGAAGCAAAGGTTGCATCTGCACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp CTGGTCTCCATGTGGTCTTGCACTGAGTATGTCATGAGGATCCGGTaGCACAGTGCTGTCAAGATCTGTAGCTTCTCCTCTGACGTCAGC +
Preference number: 5 (lower is better)
Translates to: LVSMWSCTEYVMRIR*HSAVKICSFSSDVS
Trigger: GCTGACGTCAGAGGAGAAGCTACAGATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp CGTTCCTTCCACAACTCTGCAGACATCTGCTGTCTGGTCTCCATGTaGTCTTGCACTGAGTATGTCATGAGGATCCGGTGGCACAGTGCT +
Preference number: 5 (lower is better)
Translates to: RSFHNSADICCLVSM*SCTEYVMRIRWHSA
Trigger: AGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTGTGGAAGGAACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp TTCCTCCTGAACATCAGATCTGCGCAAGCAGAGCCGCACCAGCTCTaGAACAGAATGCAGAGTCAAGGGGATTTCCGACAGCTTCATTCC +
Preference number: 5 (lower is better)
Translates to: FLLNIRSAQAEPHQL*NRMQSQGDFRQLHS
Trigger: GGAATGAAGCTGTCGGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp CAACTCTGCAGACATCTGCTGTCTGGTCTCCATGTGGTCTTGCACTaGGTATGTCATGAGGATCCGGTGGCACAGTGCTGTCAAGATCTG +
Preference number: 5 (lower is better)
Translates to: QLCRHLLSGLHVVLH*VCHEDPVAQCCQDL
Trigger: CAGATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp TTCCACAACTCTGCAGACATCTGCTGTCTGGTCTCCATGTGGTCTTaGACTGAGTATGTCATGAGGATCCGGTGGCACAGTGCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: FHNSADICCLVSMWS*TEYVMRIRWHSAVK
Trigger: CTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTGTGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp CCCCTTCATCTTCAGCAAGCCTATCAGGAAACTTCTTGCGCTTCCTaGGGACATATGGGTGGCCAGGAAGGTGTTTATGCAACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PLHLQQAYQETSCAS*GHMGGQEGVYATEP
Trigger: TGGCTCTGTTGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp GCTCACTGTCCCCTTCATCTTCAGCAAGCCTATCAGGAAACTTCTTaGGCTTCCTGCGGACATATGGGTGGCCAGGAAGGTGTTTATGCA +
Preference number: 5 (lower is better)
Translates to: AHCPLHLQQAYQETS*ASCGHMGGQEGVYA
Trigger: TGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGGACAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp TCTCTACTTCTTCTGTCTTCGTCCCCTGGACTGTCCAACGGCCTCTaGCTCACTGTCCCCTTCATCTTCAGCAAGCCTATCAGGAAACTT +
Preference number: 5 (lower is better)
Translates to: SLLLLSSSPGLSNGL*LTVPFIFSKPIRKL
Trigger: AAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGGACAGTGAGCCAGAGGCCGTTGGACAGTCCAGGGGACGAAGACAGAAGAAGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCCCCAAACAGCGTGTaGGGCAGCCCTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISPNSV*GSPSGV
Trigger: TACCCCTGAAGGGCTGCCCAACACGCTGTTTGGGGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGGGATGACGCTGTGCTaGCCCCGGATGGTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIGMTLC*PRMVFR
Trigger: TCGAAAGACCATCCGGGGCAAGCACAGCGTCATCCC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS TCA 90 bp GCTGAATCTTTATTGTCATCTGTGTCTGAGCCCTCGCTTTCCTCCTaGACATCAGATCTGCGCAAGCAGAGCCGCACCAGCTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: AESLLSSVSEPSLSS*TSDLRKQSRTSSET
Trigger: TGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGGAGGAAAGCGAGGGCTCAGACACAGATGACAATAAAGATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp ACATCTGCTGTCTGGTCTCCATGTGGTCTTGCACTGAGTATGTCATaGGGATCCGGTGGCACAGTGCTGTCAAGATCTGTAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TSAVWSPCGLALSMS*GSGGTVLSRSVASP
Trigger: AGGAGAAGCTACAGATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp CACAGGAACATTTGTTCTGCACTGTCTGAAAGTCCATGGGGTGCGTaGTCACATCATAGTAGTCCTCGGCCTCATCTCTGGTCACAGGCT +
Preference number: 5 (lower is better)
Translates to: HRNICSALSESPWGA*SHHSSPRPHLWSQA
Trigger: AGCCTGTGACCAGAGATGAGGCCGAGGACTACTATGATGTGATCACGCACCCCATGGACTTTCAGACAGTGCAGAACAAATGTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp ACATCAGATCTGCGCAAGCAGAGCCGCACCAGCTCTGAAACAGAATaGAGAGTCAAGGGGATTTCCGACAGCTTCATTCCCAATTCACCA +
Preference number: 5 (lower is better)
Translates to: TSDLRKQSRTSSETE*RVKGISDSFIPNSP
Trigger: TGGTGAATTGGGAATGAAGCTGTCGGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp TCCTTCAACACAGCAAGCCGTTCCTTCCACAACTCTGCAGACATCTaGTGTCTGGTCTCCATGTGGTCTTGCACTGAGTATGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: SFNTASRSFHNSADI*CLVSMWSCTEYVMR
Trigger: CCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTGTGGAAGGAACGGCTTGCTGTGTTGAAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp TTCTTGCGCTTCCTGCGGACATATGGGTGGCCAGGAAGGTGTTTATaGAACAGAGCCACTAGACACTGTTCTGTCTTCACCATGCAGCTT +
Preference number: 5 (lower is better)
Translates to: FLRFLRTYGWPGRCL*NRATRHCSVFTMQL
Trigger: AAGCTGCATGGTGAAGACAGAACAGTGTCTAGTGGCTCTGTTGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp GCAAGCCTATCAGGAAACTTCTTGCGCTTCCTGCGGACATATGGGTaGCCAGGAAGGTGTTTATGCAACAGAGCCACTAGACACTGTTCT +
Preference number: 5 (lower is better)
Translates to: ASLSGNFLRFLRTYG*PGRCLCNRATRHCS
Trigger: AGAACAGTGTCTAGTGGCTCTGTTGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp GCCTTGGCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCTGCTTTGTaGTTCCGTATTCGTTCTTCTTCAGCTTGGCGTTCCAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: ALAIPSWKAFSAAAL*FRIRSSSAWRSSFT
Trigger: AGTGAAACTGGAACGCCAAGCTGAAGAAGAACGAATACGGAAGCACAAAGCAGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp GGTGTTTATGCAACAGAGCCACTAGACACTGTTCTGTCTTCACCATaGAGCTTAGCACATGGCTGCCACGGCAGTTGTAAACCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: GVYATEPLDTVLSSP*SLAHGCHGSCKPQH
Trigger: ATGCTGAGGTTTACAACTGCCGTGGCAGCCATGTGCTAAGCTGCATGGTGAAGACAGAACAGTGTCTAGTGGCTCTGTTGCATAAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp TTTATGAGGTTTACTAGAGGTCCTAGGTGTACCCCCAGAATTCCGTaGGGCTCGTGTCATCTTCTGCGTGCCTTTGGCCATATCCAACAA +
Preference number: 5 (lower is better)
Translates to: FMRFTRGPRCTPRIP*GSCHLLRAFGHIQQ
Trigger: TTGTTGGATATGGCCAAAGGCACGCAGAAGATGACACGAGCCCCACGGAATTCTGGGGGTACACCTAGGACCTCTAGTAAACCTCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGACAGGGCGCTCCTCTaGTCCTCCCTGTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIDRALL*SSLSLF
Trigger: AAACAAAGACAGGGAGGACAAGAGGAGCGCCCTGTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGCGCATGACTAGTTaGGCCTTGGCAATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILRMTS*ALAIPS
Trigger: GGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCTCTTCCAGGTTCTaGGTCTTCCTCGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIISSRF*VFLARL
Trigger: GAGGCGAGCGAGGAAGACCAAGAACCTGGAAGAGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGCTTCCAGTACTCTaGCACGTCCAAATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILLPVL*HVQMRS
Trigger: TGAGCGCATTTGGACGTGCAAGAGTACTGGAAGCAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTGTCTTGGATTTCTTaGAGGGCTTCCTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILSWIS*RASCLG
Trigger: CCCCAGACAGGAAGCCCTCAAAGAAATCCAAGACAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS TCA 90 bp CTTCTGATGGTCCTGAGCAATCTGACTGGAGTTCTCTTTGTCACTTaGTGGAGAATCACAGGCACCATCAGATTTCTTCTCAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLMVLSNLTGVLFVT*WRITGTIRFLLSGL
Trigger: GAGGCCACTGAGAAGAAATCTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGGACCATCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTGCCTTCAAAGGCTaGTCACTGTGCTTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFAFKG*SLCFPG
Trigger: ACCAGGGAAGCACAGTGACAAGCCTTTGAAGGCAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTTGCTTCTGCCCTTaGCCTTCAAAGGCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILCFCP*PSKACH
Trigger: GTGACAAGCCTTTGAAGGCAAAGGGCAGAAGCAAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTGAGCTTCCCGGATaGCTGTCTTCCATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISELPG*LSSISP
Trigger: TGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCGGTACTTCACGATCTaGTGGAGGATCTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRYFTI*WRISSH
Trigger: GTGTGAAGAGATCCTCCACAAGATCGTGAAGTACCG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS GCA 90 bp TTTTGGGAGATTTGGAATTCCCTGTGGATTTCTGTCCATTCAGGATaGCTTTGCTTCTGCCCTTTGCCTTCAAAGGCTTGTCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: FWEIWNSLWISVHSG*LCFCPLPSKACHCA
Trigger: AGCACAGTGACAAGCCTTTGAAGGCAAAGGGCAGAAGCAAAGGCATCCTGAATGGACAGAAATCCACAGGGAATTCCAAATCTCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 90 bp GTCATCCTCACCTTTCTTTCGACAAACTTTGCACCTAGCATTTTCTaGGGACATATCCCACTTGATACAGGCATCAAGCATCCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: VILTFLSTNFAPSIF*GHIPLDTGIKHPKQ
Trigger: CTGCTTGGGATGCTTGATGCCTGTATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGTTTGTCGAAAGAAAGGTGAGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 90 bp CTTTCACAACTGTCTCCTTCTTCTGATGGTCCTGAGCAATCTGACTaGAGTTCTCTTTGTCACTTGATGGAGAATCACAGGCACCATCAG +
Preference number: 5 (lower is better)
Translates to: LSQLSPSSDGPEQSD*SSLCHLMENHRHHQ
Trigger: CTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGGACCATCAGAAGAAGGAGACAGTTGTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAACTATCTCCTTATTaGGTGGGCGCTCTGTACGAA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIELSPY*VGALYE
Trigger: TTCGTACAGAGCGCCCACCAAATAAGGAGATAGTTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATCTTCTGCGTGCCTTaGGCCATATCCAACAAAGTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIIFCVP*AISNKV
Trigger: GACTTTGTTGGATATGGCCAAAGGCACGCAGAAGAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGAAGACGAGCTGTTTaGGAGATAACACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRRRAV*EITQDR
Trigger: CCTGTCCTGTGTTATCTCCAAAACAGCTCGTCTTCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGCAGCTGAATCTTTATaGTCATCTGTGTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIAAESL*SSVSEP
Trigger: GGGCTCAGACACAGATGACAATAAAGATTCAGCTGC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCTCAGCAGCTGCTTaGTGCTTCCGTATTCGTTCT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFSAAA*CFRIRS
Trigger: AGAACGAATACGGAAGCACAAAGCAGCTGCTGAGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATGACTAGTTTGGCCTaGGCAATCCCTTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIMTSLA*AIPSWK
Trigger: TTTCCAGGAAGGGATTGCCAAGGCCAAACTAGTCAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTTGTTTGGGTGTGGTaGTCTCTACAGCAACTTCTG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILVWVW*SLQQLL
Trigger: CAGAAGTTGCTGTAGAGACAACCACACCCAAACAAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGGTTCTGTCCTTGTTaGGGTGTGGTTGTCTCTACA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIRFCPC*GVVVST
Trigger: TGTAGAGACAACCACACCCAAACAAGGACAGAACCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTCTTCTCTTTTGCTaGGGAGCCATGAAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFLLFC*GAMKPW
Trigger: CCAAGGCTTCATGGCTCCCAAGCAAAAGAGAAGAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAGTTTTCTTCTCTTTaGCTTGGGAGCCATGAAGCC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIEFSSL*LGSHEA
Trigger: GGCTTCATGGCTCCCAAGCAAAAGAGAAGAAAACTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTATCAGGAAACTTCTaGCGCTTCCTGCGGACATAT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILSGNF*RFLRTY
Trigger: ATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS GCA 90 bp ACGACCCAAGGTGCATTTTCACCAGTACCAGCTCGTAATGCATTATaGCGTATAAAGTATCGAACTATCTCCTTATTTGGTGGGCGCTCT +
Preference number: 5 (lower is better)
Translates to: TTQGAFSPVPARNAL*RIKYRTISLFGGRS
Trigger: AGAGCGCCCACCAAATAAGGAGATAGTTCGATACTTTATACGGCATAATGCATTACGAGCTGGTACTGGTGAAAATGCACCTTGGGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCACCGGAGGAAATTATaGAAAAATGGCGGGAGATTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIHRRKL*KNGGRF
Trigger: GAATCTCCCGCCATTTTTCAATAATTTCCTCCGGTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCTCCCACAGCATATTaGGTCATGATCTCCAACCAA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISPTAY*VMISNQ
Trigger: TTGGTTGGAGATCATGACCAAATATGCTGTGGGAGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGTTCTCTTTGTCACTaGATGGAGAATCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISSLCH*MENHRH
Trigger: GTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAAGAGTTGTCTGTCTaGGATTTCTTTGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIEELSV*DFFEGF
Trigger: GAAGCCCTCAAAGAAATCCAAGACAGACAACTCTTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTGAGTTCTTCACTTaGAGTGGCGAGCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFEFFT*SGEPLN
Trigger: ATTGAGTGGCTCGCCACTCAAAGTGAAGAACTCAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTAGTGTGCAGCTTATaGGGCGACATCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILVCSL*GDIIFI
Trigger: GATGAAGATGATGTCGCCCAATAAGCTGCACACTAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAATGCTGGAAGGTTTTaGCCAGTTAACTCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVINAGRF*PVNSWS
Trigger: GGACCAAGAGTTAACTGGCAAAAACCTTCCAGCATT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCGTTCTTCTTCAGCTaGGCGTTCCAGTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISFFFS*AFQFHF
Trigger: AAAGTGAAACTGGAACGCCAAGCTGAAGAAGAACGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTGCAGATGCAACCTTaGCTTCCTCTACCATTTTCT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVQMQP*LPLPFS
Trigger: AGAAAATGGTAGAGGAAGCAAAGGTTGCATCTGCAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCACAATCTTCACCTaGAGCATTTTCTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFTIFT*SIFSFP
Trigger: TGGGAAGGAGAAAATGCTCAAGGTGAAGATTGTGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAAAAAGTCACTGAACTaGCTGGGCAGAGAGTATTTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIKKSLN*LGREYF
Trigger: GAAATACTCTCTGCCCAGCAAGTTCAGTGACTTTTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTCTTCAGTCCTTTTTaGGGAGATTTGGAATTCCCT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVFSPF*GDLEFP
Trigger: AGGGAATTCCAAATCTCCCAAAAAAGGACTGAAGAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCTTCTGTATCTACTaGGGGCTCAAACTTCACAAT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISFCIY*GLKLHN
Trigger: ATTGTGAAGTTTGAGCCCCAAGTAGATACAGAAGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTTGCTGTTCCATGTaGTGTGTTCATGCTTGCATT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICCCSM*CVHACI
Trigger: AATGCAAGCATGAACACACAACATGGAACAGCAACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCCACTTCCTCAGTTTTaGCTGAATCTTCACTTTGGA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIPLPQF*LNLHFG
Trigger: TCCAAAGTGAAGATTCAGCAAAAACTGAGGAAGTGG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCTTTCGACAAACTTaGCACCTAGCATTTTCTGCG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFFRQT*HLAFSA
Trigger: CGCAGAAAATGCTAGGTGCAAAGTTTGTCGAAAGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS TCA 90 bp CTAGATGTTCTTCAGGAGATTTGGAATTCTTTGAGTTCTTCACTTTaGGTGGCGAGCCACTCAATGACTTCTTCAAGTGTACGTGACACC +
Preference number: 5 (lower is better)
Translates to: LDVLQEIWNSLSSSL*VASHSMTSSSVRDT
Trigger: GGTGTCACGTACACTTGAAGAAGTCATTGAGTGGCTCGCCACTCAAAGTGAAGAACTCAAAGAATTCCAAATCTCCTGAAGAACATCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp GTATTTTTGGTTCCATACATGTCTTCCAAGACAAATCCAAACATCTaGTTTCCAGGAGGGTCATGTTGGGAAGTCAAGAACAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VFLVPYMSSKTNPNI*FPGGSCWEVKNSTR
Trigger: CCTGGTGCTGTTCTTGACTTCCCAACATGACCCTCCTGGAAATCAGATGTTTGGATTTGTCTTGGAAGACATGTATGGAACCAAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS TCA 90 bp GTTTCACACCTGAAAGCACAGGCATCGCAAGGTAAAGATGTTAAATaGTGCTATACGACTGGAGCCTCTACAACCAGTTTTCATTCACCT +
Preference number: 5 (lower is better)
Translates to: VSHLKAQASQGKDVK*CYTTGASTTSFHSP
Trigger: AGGTGAATGAAAACTGGTTGTAGAGGCTCCAGTCGTATAGCATCATTTAACATCTTTACCTTGCGATGCCTGTGCTTTCAGGTGTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTCTCTCTTCGTTCTTaGGCTTTTTCCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFSLRS*AFSFNF
Trigger: GAAGTTGAAGGAAAAAGCCAAAGAACGAAGAGAGAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCATTTTTACCTAAGTTaGCTTTCTTACTGCGAGGAC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIHFYLS*LSYCED
Trigger: GTCCTCGCAGTAAGAAAGCAAACTTAGGTAAAAATG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCATTTTAGACCCAAATTaGGCTTCCGTGCTAGATGAA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIILDPN*ASVLDE
Trigger: TTCATCTAGCACGGAAGCCAAATTTGGGTCTAAAAT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS TCA 90 bp TTCACTTTGAGTGGCGAGCCACTCAATGACTTCTTCAAGTGTACGTaGCACCATAACTTAGGATTTAGTGGTGAACTAAGAGAAGAGTTG +
Preference number: 5 (lower is better)
Translates to: FTLSGEPLNDFFKCT*HHNLGFSGELREEL
Trigger: CAACTCTTCTCTTAGTTCACCACTAAATCCTAAGTTATGGTGTCACGTACACTTGAAGAAGTCATTGAGTGGCTCGCCACTCAAAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp CCACATATCCAAGTCCTCCTTTTTGTAACCTTGTTGCAACTTCAATaGGATCACTACGAAGGAAGTTTAAAAGCTCCTGGTTGCCATCAC +
Preference number: 5 (lower is better)
Translates to: PHIQVLLFVTLLQLQ*DHYEGSLKAPGCHH
Trigger: GTGATGGCAACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCATTGAAGTTGCAACAAGGTTACAAAAAGGAGGACTTGGATATGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS TCA 90 bp TTGGGAGCCATGAAGCCTTGGAGAAATTTCTTTATGACACTGGCCTaGAGGGCAATCACACACTCACCAAAATCCTTCAATTTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: LGAMKPWRNFFMTLA*RAITHSPKSFNFSN
Trigger: ATTAGAGAAATTGAAGGATTTTGGTGAGTGTGTGATTGCCCTTCAGGCCAGTGTCATAAAGAAATTTCTCCAAGGCTTCATGGCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 90 bp GTCATGTTGGGAAGTCAAGAACAGCACCAGGGAAGAACTTCAGATTaGGTTGCCATGAGTAATCTAAGGGGGATTTTCTTATATTCCTAC +
Preference number: 5 (lower is better)
Translates to: VMLGSQEQHQGRTSD*VAMSNLRGIFLYSY
Trigger: GTAGGAATATAAGAAAATCCCCCTTAGATTACTCATGGCAACTCAATCTGAAGTTCTTCCCTGGTGCTGTTCTTGACTTCCCAACATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS TCA 90 bp TGTGAAGAATGGGCAAGTGCAGGATATGCAAGCATGTTTCACACCTaGAAGCACAGGCATCGCAAGGTAAAGATGTTAAATGATGCTATA +
Preference number: 5 (lower is better)
Translates to: CEEWASAGYASMFHT*KHRHRKVKMLNDAI
Trigger: TATAGCATCATTTAACATCTTTACCTTGCGATGCCTGTGCTTTCAGGTGTGAAACATGCTTGCATATCCTGCACTTGCCCATTCTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS CCA 90 bp GTTGCAACTTCAATGAGATCACTACGAAGGAAGTTTAAAAGCTCCTaGTTGCCATCACAAGATTTTAGACCCAAATTTGGCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: VATSMRSLRRKFKSS*LPSQDFRPKFGFRA
Trigger: AGCACGGAAGCCAAATTTGGGTCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCATTGAAGTTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCTCTTAGTAGAAGGGTaGAGAGTCATATACTTGTAT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVILLVEG*RVIYLY
Trigger: ATACAAGTATATGACTCTCAACCCTTCTACTAAGAG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGAACTAAGAGAAGAGTaGTCTGTCTTGGATTTCTTT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIELREE*SVLDFF
Trigger: AAAGAAATCCAAGACAGACAACTCTTCTCTTAGTTC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTGTTCTTCAGGAGATTaGGAATTCTTTGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVICSSGD*EFFEFF
Trigger: GAAGAACTCAAAGAATTCCAAATCTCCTGAAGAACA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAAGTTCATAGCGTTTTaGAACAAGACTTCGCAATTC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIKFIAF*NKTSQF
Trigger: GAATTGCGAAGTCTTGTTCAAAAACGCTATGAACTT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCCAAATATTCTTTCCGTaGTTCTTCAGACATAGAAGC +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIQIFFP*FFRHRS
Trigger: GCTTCTATGTCTGAAGAACAACGGAAAGAATATTTG...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTTTCCTATCAGTTTaGCCTAACCCATTCTCAACT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFFLSV*PNPFST
Trigger: AGTTGAGAATGGGTTAGGCAAAACTGATAGGAAAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCGTTGTGTGTTCATGCTaGCATTTTTACCTAAGTTTG +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIVVCSC*HFYLSL
Trigger: CAAACTTAGGTAAAAATGCAAGCATGAACACACAAC...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTTTAAAAGCTCCTGGTaGCCATCACAAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVIFKSSW*PSQDFR
Trigger: TCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAAA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCTCACACAAGATCAATTaGTCATCCTCACCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISHKIN*SSSPFF
Trigger: AAAGAAAGGTGAGGATGACAAATTGATCTTGTGTGA...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS-3UTR CAA 90 bp TTAGAAAAACAGCATAAGCTTGGGATGACAGGCGTTTCTGGACTCCCTGTGATCAGCATTGGTAAACACTaGCTTCATGTCAGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: LEKQHKLGMTGVSGLPVISIGKH*LHVSKK
Trigger: TTTCTTACTGACATGAAGCAAGTGTTTACCAATGCT...GATCACAGGGAGTCCAGAAACGCCTGTCATCCCAAGCTTATGCTGTTTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404251.1
CDS CCA 90 bp GTATCCACCAATCTGAATGCTGGAAGGTTTTTGCCAGTTAACTCTTaGTCCTCATACCGCTTCTGTTTTTCTAATCTCTCAAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: VSTNLNAGRFLPVNS*SSYRFCFSNLSSIS
Trigger: AGAAATGCTTGAGAGATTAGAAAAACAGAAGCGGTATGAGGACCAAGAGTTAACTGGCAAAAACCTTCCAGCATTCAGATTGGTGGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CCTCTCCGGGCAACGGCTTCACCAGCGGGAAGGGCTTaGGGCCCAGGAGCGGCGCCATCGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PLRATASPAGRA*GPGAAPSRRRR
Trigger: CCGCCGCCGCCGCGATGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp GGCTCCCTCACCGCCGGCGCGGCCGCGCGACAGTCATaGAGCGGAACGCCACGGCGCAGAGCTCCCGCGCAC +
Preference number: 6 (lower is better)
Translates to: GSLTAGAAARQS*SGTPRRRAPAH
Trigger: GTGCGCGGGAGCTCTGCGCCGTGGCGTTCCGCTCCATGACTGTCGCGCGGCCGCGCCGGCGGTGAGGGAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp TCCTCTCCGGGCAACGGCTTCACCAGCGGGAAGGGCTaGCGGCCCAGGAGCGGCGCCATCGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SSPGNGFTSGKG*RPRSGAIAAAA
Trigger: CGCCGCCGCCGCGATGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp AAGAGCGGCTCCTCTCCGGGCAACGGCTTCACCAGCGGGAAGGGCTaGCGGCCCAGGAGCGGCGCCATCGCGGCGGCGGCGGTGGGGACT +
Preference number: 6 (lower is better)
Translates to: KSGSSPGNGFTSGKG*RPRSGAIAAAAVGT
Trigger: AGTCCCCACCGCCGCCGCCGCGATGGCGCCGCTCCTGGGCCGCAAGCCCTTCCCGCTGGTGAAGCCGTTGCCCGGAGAGGAGCCGCTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp CCCGGGTGCGGAAGGCCTCCTGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGGGCAACGGCTTCACCA +
Preference number: 6 (lower is better)
Translates to: PGCGRPPECAGW*RAAPLRATASP
Trigger: TGGTGAAGCCGTTGCCCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TTCCTGCCACGGGAGTTGCGCCTGGCAGTAGCGGGCTaGCAAGCTGGGCACTGCCACTCACCATCTGGTACT +
Preference number: 6 (lower is better)
Translates to: FLPRELRLAVAG*QAGHCHSPSGT
Trigger: AGTACCAGATGGTGAGTGGCAGTGCCCAGCTTGCCAGCCCGCTACTGCCAGGCGCAACTCCCGTGGCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GTGGAGGATCTCTTCACACTTCTGCAGCTCCAGGCTTaGCCTCCGGGAGCTCCGCTTGGTCTGAAGCACCAG +
Preference number: 6 (lower is better)
Translates to: VEDLFTLLQLQA*PPGAPLGLKHQ
Trigger: CTGGTGCTTCAGACCAAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp CACGATCTTGTGGAGGATCTCTTCACACTTCTGCAGCTCCAGGCTTaGCCTCCGGGAGCTCCGCTTGGTCTGAAGCACCAGCTCATCCAC +
Preference number: 6 (lower is better)
Translates to: HDLVEDLFTLLQLQA*PPGAPLGLKHQLIH
Trigger: GTGGATGAGCTGGTGCTTCAGACCAAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACAAGATCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CACCAGCTCATCCACCTCAGCATCATCCACAGGTGGTaGCTTGGGCTGAGACCTCCTGGTAGAGTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: HQLIHLSIIHRW*LGLRPPGRVWL
Trigger: AAGCCACACTCTACCAGGAGGTCTCAGCCCAAGGCACCACCTGTGGATGATGCTGAGGTGGATGAGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp GTCACAGGCTCCCTGAAGGGCCAGCTGAAGCGGTACTTCACGATCTaGTGGAGGATCTCTTCACACTTCTGCAGCTCCAGGCTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: VTGSLKGQLKRYFTI*WRISSHFCSSRLCL
Trigger: GAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACAAGATCGTGAAGTACCGCTTCAGCTGGCCCTTCAGGGAGCCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CTGCGCAAGCAGAGCCGCACCAGCTCTGAAACAGAATaGAGAGTCAAGGGGATTTCCGACAGCTTCATTCCC +
Preference number: 6 (lower is better)
Translates to: LRKQSRTSSETE*RVKGISDSFIP
Trigger: GGGAATGAAGCTGTCGGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp TACTTCACGATCTTGTGGAGGATCTCTTCACACTTCTaGAGCTCCAGGCTTTGCCTCCGGGAGCTCCGCTTG +
Preference number: 6 (lower is better)
Translates to: YFTILWRISSHF*SSRLCLRELRL
Trigger: CAAGCGGAGCTCCCGGAGGCAAAGCCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACAAGATCGTGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp TCCCTGAAGGGCCAGCTGAAGCGGTACTTCACGATCTaGTGGAGGATCTCTTCACACTTCTGCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLKGQLKRYFTI*WRISSHFCSSR
Trigger: CCTGGAGCTGCAGAAGTGTGAAGAGATCCTCCACAAGATCGTGAAGTACCGCTTCAGCTGGCCCTTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp TTATTGTCATCTGTGTCTGAGCCCTCGCTTTCCTCCTaGACATCAGATCTGCGCAAGCAGAGCCGCACCAGC +
Preference number: 6 (lower is better)
Translates to: LLSSVSEPSLSS*TSDLRKQSRTS
Trigger: GCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGGAGGAAAGCGAGGGCTCAGACACAGATGACAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp TGTCTGAGCCCTCGCTTTCCTCCTGAACATCAGATCTaGGCAAGCAGAGCCGCACCAGCTCTGAAACAGAAT +
Preference number: 6 (lower is better)
Translates to: CLSPRFPPEHQI*ASRAAPALKQN
Trigger: ATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTTCAGGAGGAAAGCGAGGGCTCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CCCCTTCATCTTCAGCAAGCCTATCAGGAAACTTCTTaGGCTTCCTGCGGACATATGGGTGGCCAGGAAGGT +
Preference number: 6 (lower is better)
Translates to: PLHLQQAYQETS*ASCGHMGGQEG
Trigger: ACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TTTACTAGAGGTCCTAGGTGTACCCCCAGAATTCCGTaGGGCTCGTGTCATCTTCTGCGTGCCTTTGGCCAT +
Preference number: 6 (lower is better)
Translates to: FTRGPRCTPRIP*GSCHLLRAFGH
Trigger: ATGGCCAAAGGCACGCAGAAGATGACACGAGCCCCACGGAATTCTGGGGGTACACCTAGGACCTCTAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TACAGGCATCAAGCATCCCAAGCAGCACGTGCATCCTaGAGAAAGTCTGAGCTTCCCGGATTGCTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: YRHQASQAARAS*RKSELPGLLSS
Trigger: GGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGCTTGGGATGCTTGATGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp AGGATGCCTTTGCTTCTGCCCTTTGCCTTCAAAGGCTaGTCACTGTGCTTCCCTGGTTTCTTGGCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: RMPLLLPFAFKG*SLCFPGFLAGG
Trigger: CCCACCTGCCAAGAAACCAGGGAAGCACAGTGACAAGCCTTTGAAGGCAAAGGGCAGAAGCAAAGGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp TCCCCTTCATCTTCAGCAAGCCTATCAGGAAACTTCTaGCGCTTCCTGCGGACATATGGGTGGCCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: SPSSSASLSGNF*RFLRTYGWPGR
Trigger: CCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp GGCTCACTGTCCCCTTCATCTTCAGCAAGCCTATCAGGAAACTTCTaGCGCTTCCTGCGGACATATGGGTGGCCAGGAAGGTGTTTATGC +
Preference number: 6 (lower is better)
Translates to: GSLSPSSSASLSGNF*RFLRTYGWPGRCLC
Trigger: GCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAGATGAAGGGGACAGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp AACATCAGATCTGCGCAAGCAGAGCCGCACCAGCTCTaGAACAGAATGCAGAGTCAAGGGGATTTCCGACAG +
Preference number: 6 (lower is better)
Translates to: NIRSAQAEPHQL*NRMQSQGDFRQ
Trigger: CTGTCGGAAATCCCCTTGACTCTGCATTCTGTTTCAGAGCTGGTGCGGCTCTGCTTGCGCAGATCTGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp AGACATCTGCTGTCTGGTCTCCATGTGGTCTTGCACTaGGTATGTCATGAGGATCCGGTGGCACAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RHLLSGLHVVLH*VCHEDPVAQCC
Trigger: ACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp AGCATCCCAAGCAGCACGTGCATCCTGGAGAAAGTCTaGGCTTCCCGGATTGCTGTCTTCCATTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SIPSSTCILEKV*ASRIAVFHFSS
Trigger: ACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGCTTGGGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CCCCAGAATTCCGTGGGGCTCGTGTCATCTTCTGCGTaGCTTTGGCCATATCCAACAAAGTCATCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PQNSVGLVSSSA*LWPYPTKSSAS
Trigger: TGAAGCAGATGACTTTGTTGGATATGGCCAAAGGCACGCAGAAGATGACACGAGCCCCACGGAATTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp TCTGCAGACATCTGCTGTCTGGTCTCCATGTGGTCTTaGACTGAGTATGTCATGAGGATCCGGTGGCACAGT +
Preference number: 6 (lower is better)
Translates to: SADICCLVSMWS*TEYVMRIRWHS
Trigger: ACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp CCTATCAGGAAACTTCTTGCGCTTCCTGCGGACATATaGGTGGCCAGGAAGGTGTTTATGCAACAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PIRKLLALPADI*VARKVFMQQSH
Trigger: GTGGCTCTGTTGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GTGCCAATAGGAGTCCTGCGCATGACTAGTTTGGCCTaGGCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: VPIGVLRMTSLA*AIPSWKAFSAA
Trigger: AGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAGGACTCCTATTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GCACGTGCATCCTGGAGAAAGTCTGAGCTTCCCGGATaGCTGTCTTCCATTTCTCCAGTGCAGATGCAACCT +
Preference number: 6 (lower is better)
Translates to: ARASWRKSELPG*LSSISPVQMQP
Trigger: AGGTTGCATCTGCACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TCTGGGAGACGAGCTCTATCTTCACTAGAGAGAAGACGAGCTGTTTaGGAGATAACACAGGACAGGGCGCTCCTCTTGTCCTCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SGRRALSSLERRRAV*EITQDRALLLSSLS
Trigger: AGACAGGGAGGACAAGAGGAGCGCCCTGTCCTGTGTTATCTCCAAAACAGCTCGTCTTCTCTCTAGTGAAGATAGAGCTCGTCTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TCCCAAGCAGCACGTGCATCCTGGAGAAAGTCTGAGCTTCCCGGATaGCTGTCTTCCATTTCTCCAGTGCAGATGCAACCTTTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SQAARASWRKSELPG*LSSISPVQMQPLLP
Trigger: AGGAAGCAAAGGTTGCATCTGCACTGGAGAAATGGAAGACAGCAATCCGGGAAGCTCAGACTTTCTCCAGGATGCACGTGCTGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TTTCGATCTGTGCCAATAGGAGTCCTGCGCATGACTAGTTTGGCCTaGGCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCTGCTTTGTGC +
Preference number: 6 (lower is better)
Translates to: FRSVPIGVLRMTSLA*AIPSWKAFSAAALC
Trigger: GCACAAAGCAGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp CACATGGCTGCCACGGCAGTTGTAAACCTCAGCATTGGTAAACACTaGCTTCATGTCAGTAAGAAACTCCTGCACAGAGCGGTAGCTCCC +
Preference number: 6 (lower is better)
Translates to: HMAATAVVNLSIGKH*LHVSKKLLHRAVAP
Trigger: GGGAGCTACCGCTCTGTGCAGGAGTTTCTTACTGACATGAAGCAAGTGTTTACCAATGCTGAGGTTTACAACTGCCGTGGCAGCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp GCAATGAGGTGTAGGGCTGCAGGAGGCAGATGTTTATaGGGTTTACTAGAGGTCCTAGGTGTACCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: AMRCRAAGGRCL*GLLEVLGVPPE
Trigger: TTCTGGGGGTACACCTAGGACCTCTAGTAAACCTCATAAACATCTGCCTCCTGCAGCCCTACACCTCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp GCGTGTTGGGCAGCCCTTCAGGGGTATCCACCAATCTaGATGCTGGAAGGTTTTTGCCAGTTAACTCTTGGT +
Preference number: 6 (lower is better)
Translates to: ACWAALQGYPPI*MLEGFCQLTLG
Trigger: ACCAAGAGTTAACTGGCAAAAACCTTCCAGCATTCAGATTGGTGGATACCCCTGAAGGGCTGCCCAACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp GTCTGGTCTCCATGTGGTCTTGCACTGAGTATGTCATaGGGATCCGGTGGCACAGTGCTGTCAAGATCTGTA +
Preference number: 6 (lower is better)
Translates to: VWSPCGLALSMS*GSGGTVLSRSV
Trigger: TACAGATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACATGGAGACCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp ACAGCAAGCCGTTCCTTCCACAACTCTGCAGACATCTaGTGTCTGGTCTCCATGTGGTCTTGCACTGAGTAT +
Preference number: 6 (lower is better)
Translates to: TASRSFHNSADI*CLVSMWSCTEY
Trigger: ATACTCAGTGCAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTGTGGAAGGAACGGCTTGCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp TTCCTTCAACACAGCAAGCCGTTCCTTCCACAACTCTaGAGACATCTGCTGTCTGGTCTCCATGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: FLQHSKPFLPQL*RHLLSGLHVVL
Trigger: CAAGACCACATGGAGACCAGACAGCAGATGTCTGCAGAGTTGTGGAAGGAACGGCTTGCTGTGTTGAAGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CTTCAGCAAGCCTATCAGGAAACTTCTTGCGCTTCCTaGGGACATATGGGTGGCCAGGAAGGTGTTTATGCA +
Preference number: 6 (lower is better)
Translates to: LQQAYQETSCAS*GHMGGQEGVYA
Trigger: TGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGATAGGCTTGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TCAGGAAACTTCTTGCGCTTCCTGCGGACATATGGGTaGCCAGGAAGGTGTTTATGCAACAGAGCCACTAGA +
Preference number: 6 (lower is better)
Translates to: SGNFLRFLRTYG*PGRCLCNRATR
Trigger: TCTAGTGGCTCTGTTGCATAAACACCTTCCTGGCCACCCATATGTCCGCAGGAAGCGCAAGAAGTTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp CGAGCTCTATCTTCACTAGAGAGAAGACGAGCTGTTTaGGAGATAACACAGGACAGGGCGCTCCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: RALSSLERRRAV*EITQDRALLLS
Trigger: GGACAAGAGGAGCGCCCTGTCCTGTGTTATCTCCAAAACAGCTCGTCTTCTCTCTAGTGAAGATAGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp CGATCTGTGCCAATAGGAGTCCTGCGCATGACTAGTTaGGCCTTGGCAATCCCTTCCTGGAAAGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: RSVPIGVLRMTS*ALAIPSWKAFS
Trigger: TGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TTGGCCTTGGCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCTGCTTaGTGCTTCCGTATTCGTTCTTCTTCAGCTTGGCGTTCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: LALAIPSWKAFSAAA*CFRIRSSSAWRSSF
Trigger: GAAACTGGAACGCCAAGCTGAAGAAGAACGAATACGGAAGCACAAAGCAGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TTATGGTTTCGATCTGTGCCAATAGGAGTCCTGCGCATGACTAGTTaGGCCTTGGCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LWFRSVPIGVLRMTS*ALAIPSWKAFSAAA
Trigger: AGCAGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGCCAAGGCCAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCGAAACCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp ATTTGTTCTGCACTGTCTGAAAGTCCATGGGGTGCGTaGTCACATCATAGTAGTCCTCGGCCTCATCTCTGG +
Preference number: 6 (lower is better)
Translates to: ICSALSESPWGA*SHHSSPRPHLW
Trigger: CCAGAGATGAGGCCGAGGACTACTATGATGTGATCACGCACCCCATGGACTTTCAGACAGTGCAGAACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp TTAGCTGACTGCTTCCAGTACTCTTGCACGTCCAAATaGGCTCACTGTACCTTTCCAAGCGGGCTTCATACT +
Preference number: 6 (lower is better)
Translates to: LADCFQYSCTSK*AHCTFPSGLHT
Trigger: AGTATGAAGCCCGCTTGGAAAGGTACAGTGAGCGCATTTGGACGTGCAAGAGTACTGGAAGCAGTCAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS GCA 72 bp CTTCCTTGTGTGTTAGCTGACTGCTTCCAGTACTCTTaGACGTCCAAATGCGCTCACTGTACCTTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: LPCVLADCFQYS*TSKCAHCTFPS
Trigger: GCTTGGAAAGGTACAGTGAGCGCATTTGGACGTGCAAGAGTACTGGAAGCAGTCAGCTAACACACAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp ATGTGGTCTTGCACTGAGTATGTCATGAGGATCCGGTaGCACAGTGCTGTCAAGATCTGTAGCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: MWSCTEYVMRIR*HSAVKICSFSS
Trigger: AGAGGAGAAGCTACAGATCTTGACAGCACTGTGCCACCGGATCCTCATGACATACTCAGTGCAAGACCACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GCAATCCCTTCCTGGAAAGCTTTCTCAGCAGCTGCTTaGTGCTTCCGTATTCGTTCTTCTTCAGCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: AIPSWKAFSAAA*CFRIRSSSAWR
Trigger: ACGCCAAGCTGAAGAAGAACGAATACGGAAGCACAAAGCAGCTGCTGAGAAAGCTTTCCAGGAAGGGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp ACTTTGCACCTAGCATTTTCTGCGGACATATCCCACTaGATACAGGCATCAAGCATCCCAAGCAGCACGTGC +
Preference number: 6 (lower is better)
Translates to: TLHLAFSADISH*IQASSIPSSTC
Trigger: GCACGTGCTGCTTGGGATGCTTGATGCCTGTATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TTTCGACAAACTTTGCACCTAGCATTTTCTGCGGACATATCCCACTaGATACAGGCATCAAGCATCCCAAGCAGCACGTGCATCCTGGAG +
Preference number: 6 (lower is better)
Translates to: FRQTLHLAFSADISH*IQASSIPSSTCILE
Trigger: CTCCAGGATGCACGTGCTGCTTGGGATGCTTGATGCCTGTATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGTTTGTCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp CATCACCAGAGACTGTGTGGTCTTTGCAGTGATGGTTaGATCGGTAGTCAATGCTGTCATGTACCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: HHQRLCGLCSDG*IGSQCCHVPSL
Trigger: AAGGCTGGGTACATGACAGCATTGACTACCGATTCAACCATCACTGCAAAGACCACACAGTCTCTGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp ATTTCTGTCCATTCAGGATGCCTTTGCTTCTGCCCTTaGCCTTCAAAGGCTTGTCACTGTGCTTCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: ISVHSGCLCFCP*PSKACHCASLV
Trigger: AACCAGGGAAGCACAGTGACAAGCCTTTGAAGGCAAAGGGCAGAAGCAAAGGCATCCTGAATGGACAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GCCACGGCAGTTGTAAACCTCAGCATTGGTAAACACTaGCTTCATGTCAGTAAGAAACTCCTGCACAGAGCG +
Preference number: 6 (lower is better)
Translates to: ATAVVNLSIGKH*LHVSKKLLHRA
Trigger: CGCTCTGTGCAGGAGTTTCTTACTGACATGAAGCAAGTGTTTACCAATGCTGAGGTTTACAACTGCCGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp TCTTCTGATGGTCCTGAGCAATCTGACTGGAGTTCTCTTTGTCACTaGATGGAGAATCACAGGCACCATCAGATTTCTTCTCAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SSDGPEQSDWSSLCH*MENHRHHQISSQWP
Trigger: AGGCCACTGAGAAGAAATCTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGGACCATCAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp ATGCCGTATAAAGTATCGAACTATCTCCTTATTTGGTaGGCGCTCTGTACGAATCAAGCTGTCTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: MPYKVSNYLLIW*ALCTNQAVCWH
Trigger: GTGCCAGCAGACAGCTTGATTCGTACAGAGCGCCCACCAAATAAGGAGATAGTTCGATACTTTATACGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp GTCCTGAGCAATCTGACTGGAGTTCTCTTTGTCACTTaGTGGAGAATCACAGGCACCATCAGATTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VLSNLTGVLFVT*WRITGTIRFLL
Trigger: GAGAAGAAATCTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GGTCCTGAGCAATCTGACTGGAGTTCTCTTTGTCACTaGATGGAGAATCACAGGCACCATCAGATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GPEQSDWSSLCH*MENHRHHQISS
Trigger: AGAAGAAATCTGATGGTGCCTGTGATTCTCCATCAAGTGACAAAGAGAACTCCAGTCAGATTGCTCAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp GACAAATCCAAACATCTGATTTCCAGGAGGGTCATGTaGGGAAGTCAAGAACAGCACCAGGGAAGAACTTCA +
Preference number: 6 (lower is better)
Translates to: DKSKHLISRRVM*GSQEQHQGRTS
Trigger: TGAAGTTCTTCCCTGGTGCTGTTCTTGACTTCCCAACATGACCCTCCTGGAAATCAGATGTTTGGATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS CAA 90 bp TTCTCCTTCCCAACCTCGAAGTCACACTCTTCTCCCACAGCATATTaGGTCATGATCTCCAACCAAGCAGTATCTACTAACTTCTCTAAG +
Preference number: 6 (lower is better)
Translates to: FSFPTSKSHSSPTAY*VMISNQAVSTNFSK
Trigger: CTTAGAGAAGTTAGTAGATACTGCTTGGTTGGAGATCATGACCAAATATGCTGTGGGAGAAGAGTGTGACTTCGAGGTTGGGAAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp TGGGCAAGTGCAGGATATGCAAGCATGTTTCACACCTaGAAGCACAGGCATCGCAAGGTAAAGATGTTAAAT +
Preference number: 6 (lower is better)
Translates to: WASAGYASMFHT*KHRHRKVKMLN
Trigger: ATTTAACATCTTTACCTTGCGATGCCTGTGCTTTCAGGTGTGAAACATGCTTGCATATCCTGCACTTGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS CCA 72 bp ATTATGCCGTATAAAGTATCGAACTATCTCCTTATTTaGTGGGCGCTCTGTACGAATCAAGCTGTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IMPYKVSNYLLI*WALCTNQAVCW
Trigger: CCAGCAGACAGCTTGATTCGTACAGAGCGCCCACCAAATAAGGAGATAGTTCGATACTTTATACGGCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp GGTTCTGTCCTTGTTTGGGTGTGGTTGTCTCTACAGCAACTTCTGTaGCTGTTCCATGTTGTGTGTTCATGCTTGCATTTTTACCTAAGT +
Preference number: 6 (lower is better)
Translates to: GSVLVWVWLSLQQLL*LFHVVCSCLHFYLS
Trigger: ACTTAGGTAAAAATGCAAGCATGAACACACAACATGGAACAGCAACAGAAGTTGCTGTAGAGACAACCACACCCAAACAAGGACAGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp GTATCTACTAACTTCTCTAAGGAGGCTGTGTTATGGTaGACCATTTCCAGAACAAGCTTCTCATACCAGGCA +
Preference number: 6 (lower is better)
Translates to: VSTNFSKEAVLW*TISRTSFSYQA
Trigger: TGCCTGGTATGAGAAGCTTGTTCTGGAAATGGTTCACCATAACACAGCCTCCTTAGAGAAGTTAGTAGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp AGTGGCGAGCCACTCAATGACTTCTTCAAGTGTACGTaGCACCATAACTTAGGATTTAGTGGTGAACTAAGA +
Preference number: 6 (lower is better)
Translates to: SGEPLNDFFKCT*HHNLGFSGELR
Trigger: TCTTAGTTCACCACTAAATCCTAAGTTATGGTGTCACGTACACTTGAAGAAGTCATTGAGTGGCTCGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp CTGAAAGCACAGGCATCGCAAGGTAAAGATGTTAAATaGTGCTATACGACTGGAGCCTCTACAACCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LKAQASQGKDVK*CYTTGASTTSF
Trigger: AAAACTGGTTGTAGAGGCTCCAGTCGTATAGCATCATTTAACATCTTTACCTTGCGATGCCTGTGCTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466844.1
CDS GCA 72 bp ACCTTTCTTTCGACAAACTTTGCACCTAGCATTTTCTaGGGACATATCCCACTTGATACAGGCATCAAGCAT +
Preference number: 6 (lower is better)
Translates to: TFLSTNFAPSIF*GHIPLDTGIKH
Trigger: ATGCTTGATGCCTGTATCAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGTTTGTCGAAAGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TTCATAGCGTTTTTGAACAAGACTTCGCAATTCTTCTaGGAGACGAGCTCTATCTTCACTAGAGAGAAGACG +
Preference number: 6 (lower is better)
Translates to: FIAFLNKTSQFF*ETSSIFTREKT
Trigger: CGTCTTCTCTCTAGTGAAGATAGAGCTCGTCTCCCAGAAGAATTGCGAAGTCTTGTTCAAAAACGCTATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp CTTGTTTGGGTGTGGTTGTCTCTACAGCAACTTCTGTaGCTGTTCCATGTTGTGTGTTCATGCTTGCATTTT +
Preference number: 6 (lower is better)
Translates to: LVWVWLSLQQLL*LFHVVCSCLHF
Trigger: AAAATGCAAGCATGAACACACAACATGGAACAGCAACAGAAGTTGCTGTAGAGACAACCACACCCAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS CAA 90 bp CATAACTTAGGATTTAGTGGTGAACTAAGAGAAGAGTTGTCTGTCTaGGATTTCTTTGAGGGCTTCCTGTCTGGGGATCCAGTATTCTTC +
Preference number: 6 (lower is better)
Translates to: HNLGFSGELREELSV*DFFEGFLSGDPVFF
Trigger: GAAGAATACTGGATCCCCAGACAGGAAGCCCTCAAAGAAATCCAAGACAGACAACTCTTCTCTTAGTTCACCACTAAATCCTAAGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp GACTATCACATAAAAACCATAGGTTCTGTCCTTGTTTGGGTGTGGTaGTCTCTACAGCAACTTCTGTTGCTGTTCCATGTTGTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: DYHIKTIGSVLVWVW*SLQQLLLLFHVVCS
Trigger: TGAACACACAACATGGAACAGCAACAGAAGTTGCTGTAGAGACAACCACACCCAAACAAGGACAGAACCTATGGTTTTTATGTGATAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS CAA 90 bp GCAACTTCAATGAGATCACTACGAAGGAAGTTTAAAAGCTCCTGGTaGCCATCACAAGATTTTAGACCCAAATTTGGCTTCCGTGCTAGA +
Preference number: 6 (lower is better)
Translates to: ATSMRSLRRKFKSSW*PSQDFRPKFGFRAR
Trigger: TCTAGCACGGAAGCCAAATTTGGGTCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCATTGAAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS GCA 72 bp TTCTGCGTGCCTTTGGCCATATCCAACAAAGTCATCTaGTTCATTTTGGTTTTAGGAGTCTTCAGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: FCVPLAISNKVI*FILVLGVFSPF
Trigger: AAAAGGACTGAAGACTCCTAAAACCAAAATGAAGCAGATGACTTTGTTGGATATGGCCAAAGGCACGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 72 bp ATAAAAACCATAGGTTCTGTCCTTGTTTGGGTGTGGTaGTCTCTACAGCAACTTCTGTTGCTGTTCCATGTT +
Preference number: 6 (lower is better)
Translates to: IKTIGSVLVWVW*SLQQLLLLFHV
Trigger: AACATGGAACAGCAACAGAAGTTGCTGTAGAGACAACCACACCCAAACAAGGACAGAACCTATGGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS CAA 72 bp ATCAATTTGTCATCCTCACCTTTCTTTCGACAAACTTaGCACCTAGCATTTTCTGCGGACATATCCCACTTG +
Preference number: 6 (lower is better)
Translates to: INLSSSPFFRQT*HLAFSADISHL
Trigger: CAAGTGGGATATGTCCGCAGAAAATGCTAGGTGCAAAGTTTGTCGAAAGAAAGGTGAGGATGACAAATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CAA 90 bp GGCGACATCATCTTCATCATTTCTTCTAGATGTTCTTCAGGAGATTaGGAATTCTTTGAGTTCTTCACTTTGAGTGGCGAGCCACTCAAT +
Preference number: 6 (lower is better)
Translates to: GDIIFIISSRCSSGD*EFFEFFTLSGEPLN
Trigger: ATTGAGTGGCTCGCCACTCAAAGTGAAGAACTCAAAGAATTCCAAATCTCCTGAAGAACATCTAGAAGAAATGATGAAGATGATGTCGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS TCA 72 bp CAAGTCCTCCTTTTTGTAACCTTGTTGCAACTTCAATaGGATCACTACGAAGGAAGTTTAAAAGCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: QVLLFVTLLQLQ*DHYEGSLKAPG
Trigger: ACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCATTGAAGTTGCAACAAGGTTACAAAAAGGAGGACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS GCA 72 bp GGTGCATTTTCACCAGTACCAGCTCGTAATGCATTATaGCGTATAAAGTATCGAACTATCTCCTTATTTGGT +
Preference number: 6 (lower is better)
Translates to: GAFSPVPARNAL*RIKYRTISLFG
Trigger: ACCAAATAAGGAGATAGTTCGATACTTTATACGGCATAATGCATTACGAGCTGGTACTGGTGAAAATGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp CTAATCTCTCAAGCATTTCTTTCTCTCTTCGTTCTTTaGCTTTTTCCTTCAACTTCTTTTTCAGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LISQAFLSLFVL*LFPSTSFSAPP
Trigger: GGGAGGAGCTGAAAAAGAAGTTGAAGGAAAAAGCCAAAGAACGAAGAGAGAAAGAAATGCTTGAGAGATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp AATCTGAATGCTGGAAGGTTTTTGCCAGTTAACTCTTaGTCCTCATACCGCTTCTGTTTTTCTAATCTCTCA +
Preference number: 6 (lower is better)
Translates to: NLNAGRFLPVNS*SSYRFCFSNLS
Trigger: TGAGAGATTAGAAAAACAGAAGCGGTATGAGGACCAAGAGTTAACTGGCAAAAACCTTCCAGCATTCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1
CDS CCA 72 bp TCAATGAGATCACTACGAAGGAAGTTTAAAAGCTCCTaGTTGCCATCACAAGATTTTAGACCCAAATTTGGC +
Preference number: 6 (lower is better)
Translates to: SMRSLRRKFKSS*LPSQDFRPKFG
Trigger: GCCAAATTTGGGTCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS CAA 72 bp ATGAGATCACTACGAAGGAAGTTTAAAAGCTCCTGGTaGCCATCACAAGATTTTAGACCCAAATTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: MRSLRRKFKSSW*PSQDFRPKFGF
Trigger: GAAGCCAAATTTGGGTCTAAAATCTTGTGATGGCAACCAGGAGCTTTTAAACTTCCTTCGTAGTGATCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339594.9
ENST00000404251.1
ENST00000466844.1
CDS CAA 90 bp TTGAGAGTCATATACTTGTATGGATCAAGTAAAAAGTCACTGAACTaGCTGGGCAGAGAGTATTTCTTCACCAATTCATCTTCTACGACC +
Preference number: 6 (lower is better)
Translates to: LRVIYLYGSSKKSLN*LGREYFFTNSSSTT
Trigger: GGTCGTAGAAGATGAATTGGTGAAGAAATACTCTCTGCCCAGCAAGTTCAGTGACTTTTTACTTGATCCATACAAGTATATGACTCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339594.9
ENST00000404251.1