RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAZ1A (Homo sapiens)

Ensembl gene IDs: ENSG00000198604

Ensembl transcript IDs: ENST00000358716.8, ENST00000360310.6, ENST00000382422.6, ENST00000553385.1, ENST00000553573.1, ENST00000553853.1, ENST00000554391.1, ENST00000554865.1, ENST00000555273.1, ENST00000555331.1, ENST00000556314.2, ENST00000557739.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTATAGATTTAGACCATATCACGCTACGATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGACTAGCAGAAGAAAGGAGAGACTCT +
Preference number: 1 (lower is better)
Translates to: SIDLDHITLRSKVDR*RKTWDRLAEERRDS
Trigger: AGAGTCTCTCCTTTCTTCTGCTAGTCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCGTGATATGGTCTAAATCTATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554865.1
3UTR TCA 90 bp TGTTTTTCTTCAAATATATCCTTTAGAAGGACAAAGTCAGATTCGTaGCTTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACT +
Preference number: 1 (lower is better)
Translates to: CFSSNISFRRTKSDS*LFRSRWCANLVHIT
Trigger: AGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAGTCACGAATCTGACTTTGTCCTTCTAAAGGATATATTTGAAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR-3UTR CCA 90 bp GGTGGTGTGCTAACTTGGTCCACATTACTGGGTGTGACGTGGAGTCCAAGCTTTGGCCACACTTTCATGTaGTCAATCAATTGTTATTGC +
Preference number: 2 (lower is better)
Translates to: GGVLTWSTLLGVTWSPSFGHTFM*SINCYC
Trigger: GCAATAACAATTGATTGACCACATGAAAGTGTGGCC...AAAGCTTGGACTCCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR-3UTR TCA 90 bp CTTCAAATATATCCTTTAGAAGGACAAAGTCAGATTCGTGACTTTTTCGCAGCCCCACATTACTGGGTGTaGCGTGGAGTCCAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: LQIYPLEGQSQIRDFFAAPHYWV*RGVQAF
Trigger: AAAAGCTTGGACTCCACGTCACACCCAGTAATGTGG...GGCTGCGAAAAAGTCACGAATCTGACTTTGTCCTTCTAAAGGATATATTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAACCTTTTCTAAACTGTaGTATAGCGGAAGACTCATC +
Preference number: 2 (lower is better)
Translates to: DLIPAASTGTALQGYKIGTFSKL*YSGRLI
Trigger: GATGAGTCTTCCGCTATAGCACAGTTTAGAAAAGGT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
3UTR CAA 90 bp TCACAAAGAACCATGTTTTCAGCATCGCCTTTCTTTCGACATATCTaGCAACGCGCATTCAGTATAGATTTAGACCATATCACGCTACGA +
Preference number: 2 (lower is better)
Translates to: SQRTMFSASPFFRHI*QRAFSIDLDHITLR
Trigger: TCGTAGCGTGATATGGTCTAAATCTATACTGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGCGATGCTGAAAACATGGTTCTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
3UTR-3UTR CCA 90 bp TCAGCATCGCCTTTCTTTCGACATATCTTGCAACGCGCATTCAGTATAGATTTACGCTACGATCCAAGGTaGATAGGTGAAGAAAAACTT +
Preference number: 2 (lower is better)
Translates to: SASPFFRHILQRAFSIDLRYDPR*IGEEKL
Trigger: AAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCG...TAAATCTATACTGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGCGATGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554865.1
3UTR CCA 72 bp ATTCGTGACTTTTTCGCAGCCGGTGGTGTGCTAACTTaGTCCACATTACTGGGTGTGACGTGGAGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: IRDFFAAGGVLT*STLLGVTWSPS
Trigger: GCTTGGACTCCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAGTCACGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR-3UTR CAA 90 bp TTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACTGGGTGTGACGTGGCTTGTGTTACGAGGGTaGTATTCAAAGCAGTTCGAA +
Preference number: 3 (lower is better)
Translates to: FFAAGGVLTWSTLLGVTWLVLRG*YSKQFE
Trigger: TTCGAACTGCTTTGAATACAACCCTCGTAACACAAG...CCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR-3UTR CAA 90 bp TTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACTGGGTGTGACGTGGCAGCTTTTGCTTCACTaGTGTTACGAGGGTTGTATT +
Preference number: 3 (lower is better)
Translates to: FFAAGGVLTWSTLLGVTWQLLLH*CYEGCI
Trigger: AATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG...CCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR TCA 72 bp TCAAATATATCCTTTAGAAGGACAAAGTCAGATTCGTaGCTTTTTCGCAGCCGGTGGTGTGCTAACTTGGTC +
Preference number: 3 (lower is better)
Translates to: SNISFRRTKSDS*LFRSRWCANLV
Trigger: GACCAAGTTAGCACACCACCGGCTGCGAAAAAGTCACGAATCTGACTTTGTCCTTCTAAAGGATATATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555331.1
3UTR TCA 72 bp TTAGACCATATCACGCTACGATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGACTAGCAGAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: LDHITLRSKVDR*RKTWDRLAEER
Trigger: CCTTTCTTCTGCTAGTCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCGTGATATGGTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554865.1
3UTR TCA 72 bp TGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTaGGTCAGGACTGTCTATCAATTTAGTTCAGATTCC +
Preference number: 3 (lower is better)
Translates to: WLLKSDGKLVTV*VRTVYQFSSDS
Trigger: GGAATCTGAACTAAATTGATAGACAGTCCTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACGGCTGCCTTTTGTGTaGCTGACGCGCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPRLPFV*LTRRGR
Trigger: GCGGCCGCGGCGCGTCAGTCACACAAAAGGCAGCCG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTCCGCGCGGGGAATTaGGTCCCACCGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLRAGN*VPPPLP
Trigger: GGGAAGTGGCGGTGGGACGCAATTCCCCGCGCGGAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATGCCGCTTCTCCCGCTaGCACTGCCCGACTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSCRFSR*HCPTPR
Trigger: GCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGTTCGTTCCTGCCGCTaGCCGGGTGTCGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPVRSCR*PGVERA
Trigger: CGCTCGCTCGACACCCGGGCAGCGGCAGGAACGAAC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGGCCGGTCCGCGCGCTaGGAGAAGCTCGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSGRSAR*EKLGCL
Trigger: AAGGCAGCCGAGCTTCTCCCAGCGCGCGGACCGGCC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAAGCCGAGTTCGTTCCTaGCGCTGCCCGGGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPSRVRS*RCPGVE
Trigger: CTCGACACCCGGGCAGCGGCAGGAACGAACTCGGCT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR TCA 90 bp TTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACTGGGTGTGACGTGGCCACATTACTGGGTGTaGCGTGGAGTCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FFAAGGVLTWSTLLGVTWPHYWV*RGVQAF
Trigger: AAAAGCTTGGACTCCACGTCACACCCAGTAATGTGG...CCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATGCCGCTTCTCCCGCTaGCACTGCCCGACTCCGCGC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLICRFSR*HCPTPR
Trigger: GCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTCTCCCGCTGCCACTaGCCGACTCCGCGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFSRCH*PTPRGE
Trigger: TTCCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGGAAAGCCGGTAAGGTaGGGAGCCCTCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIGKPVR*GALGGS
Trigger: GCTGCCGCCGAGGGCTCCCCACCTTACCGGCTTTCC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR CCA 90 bp AGTCAGATTCGTGACTTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACTTTTTCGCAGCCGGTaGTGTGCTAACTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SQIRDFFAAGGVLTWSTLLFRSR*CANLVH
Trigger: GTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAG...TAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAGTCACGAATCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR TCA 90 bp ACGGTCCAGAACTGTTTTATAAGAACGCCCACTGTCACTGGCATCATCTCTCACCTTCAGGCACAGTCTTaGGCTTTGGTCGAACACAGT +
Preference number: 4 (lower is better)
Translates to: TVQNCFIRTPTVTGIISHLQAQS*ALVEHS
Trigger: ACTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAG...GTGAGAGATGATGCCAGTGACAGTGGGCGTTCTTATAAAACAGTTCTGGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGCTTGCAGTGGGCCATaGCTGTGGCGAGTAGAACGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSACSGP*LWRVER
Trigger: TCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTCTCCCGCTGCCACTaGCCGACTCCGCGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFSRCH*PTPRGE
Trigger: TTCCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATGCGATCACGCCGACTaGCACTTGTCCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSCDHAD*HLSTFS
Trigger: GGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGGCAGCTGCACAGAATaGTCACGTGGACCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPGSCTE*SRGPWS
Trigger: TGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TTTTTCGCAGCCGGTGGTGTGCTAACTTGGTCCACATTACTGGGTGTGACGTGGGATGTCATAGTAGTCTaGGACCTGGAGATTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FFAAGGVLTWSTLLGVTWDVIVV*DLEIVF
Trigger: AAAGACAATCTCCAGGTCCCAGACTACTATGACATC...CCACGTCACACCCAGTAATGTGGACCAAGTTAGCACACCACCGGCTGCGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGCCTTTTGTGTGACTaGCGCGCCGCGGCCGCTACC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCLLCD*RAAAAT
Trigger: GGTAGCGGCCGCGGCGCGTCAGTCACACAAAAGGCA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTGTGGCCATGCAGCTaGCAAAGATGCAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLWPCS*QRCNCR
Trigger: TCTGCAGTTGCATCTTTGGCAGCTGCATGGCCACAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATACATCTGCTTGCAGTaGGCCATGACTGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPYICLQ*AMTVAS
Trigger: ACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTTTTTCGCAGCCGGTaGTGTGCTAACTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLFRSR*CANLVH
Trigger: GTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGACTCAAGTGCTTCCTaGTACGTCAGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGDSSAS*YVSPGL
Trigger: TAGACCTGGACTGACGTATCAGGAAGCACTTGAGTC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTTCAGGCACAGTCTTaGGCTTTGGTCGAACACAGT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLQAQS*ALVEHS
Trigger: ACTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTGGGTGTGCTCTGCTaGCTCCTTGAAGGGTATCTT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLGVLC*LLEGYL
Trigger: AAGATACCCTTCAAGGAGTCAGCAGAGCACACCCAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGCTTGCAGTGGGCCATaGCTGTGGCGAGTAGAACGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIACSGP*LWRVER
Trigger: TCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAAAGCAGACAATTCATaGACTCCTCCCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGKADNS*TPPCRP
Trigger: TGGCCGACAGGGAGGAGTTCATGAATTGTCTGCTTT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACCACATTACTGGGTGTaGCGTGGAGTCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPPHYWV*RGVQAF
Trigger: AAAAGCTTGGACTCCACGTCACACCCAGTAATGTGG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAACAAAGTCAGATTCGTaGCTTTTTCGCAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPTKSDS*LFRSRW
Trigger: CCACCGGCTGCGAAAAAGTCACGAATCTGACTTTGT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTTACAGCCTGTCACTaGTACAGGAAGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPFTACH*YRKRQR
Trigger: CCGCTGTCTCTTCCTGTATCAGTGACAGGCTGTAAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGCAACTGCAGACAGTaGAGATTTTGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPCNCRQ*RFCGVC
Trigger: GCAGACCCCACAAAATCTGCACTGTCTGCAGTTGCA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATGCAACTGCAGACAGTaGAGATTTTGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGCNCRQ*RFCGVC
Trigger: GCAGACCCCACAAAATCTGCACTGTCTGCAGTTGCA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACTGTGGCCATGCAGCTaGCAAAGATGCAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLWPCS*QRCNCR
Trigger: TCTGCAGTTGCATCTTTGGCAGCTGCATGGCCACAG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp ACGGTCCAGAACTGTTTTATAAGAACGCCCACTGTCACTGGCATCATCTCTCACGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: TVQNCFIRTPTVTGIISHENAAQ*PALFER
Trigger: TCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTC...GTGAGAGATGATGCCAGTGACAGTGGGCGTTCTTATAAAACAGTTCTGGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTTGGACTTAATACCTaGAGCCAGCACTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLGLNT*SQHWYS
Trigger: GCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTTGGACTTAATACCTaGAGCCAGCACTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLGLNT*SQHWYS
Trigger: GCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATACCTCCTCTCGTCCTaGCGCCGCCTCACAATGGGG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIYLLSS*RRLTMG
Trigger: CCCCATTGTGAGGCGGCGGCAGGACGAGAGGAGGTA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGCCTCTCGGAGCTCCTaGGAAGTTTCTGATCTACTT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPASRSS*EVSDLL
Trigger: AAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTCCTGGGAAGTTTCTaGTCTACTTTCGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLLGSF*STFGSE
Trigger: TTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAATGCCCTGCTCTATTTaGAAGAGTGCCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPMPCSI*KSAIAR
Trigger: TCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCAT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCTTCCTCCTCACTTTaGCCTTCTTCTTCATCGCCA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSSSSL*PSSSSP
Trigger: TGGCGATGAAGAAGAAGGTCAAAGTGAGGAGGAAGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACTCGTTTGGGTAGGCTaGCTTCTTCCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLVWVG*LLPLLE
Trigger: CTCAAGAAGAGGAAGAAGTCAGCCTACCCAAACGAG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTGGGTGTGCTCTGCTaGCTCCTTGAAGGGTATCTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLGVLC*LLEGYL
Trigger: AAGATACCCTTCAAGGAGTCAGCAGAGCACACCCAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAAAGCAGACAATTCATaGACTCCTCCCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSKADNS*TPPCRP
Trigger: TGGCCGACAGGGAGGAGTTCATGAATTGTCTGCTTT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAACTGGTTTTGGCAGCTaGACAGAATGGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSTGFGS*TEWSRG
Trigger: TCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGTAAGCGCGAACGATaGGTAAGGCTGGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPCKRER*VRLVKY
Trigger: ATACTTGACCAGCCTTACCCATCGTTCGCGCTTACA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATGGTCACGTGGACCTTaGTCAATGTTGGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGWSRGP*SMLEVD
Trigger: ATCTACCTCCAACATTGACCAAGGTCCACGTGACCA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGGTCACGTGGACCTTaGTCAATGTTGGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPWSRGP*SMLEVD
Trigger: ATCTACCTCCAACATTGACCAAGGTCCACGTGACCA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACACAGAATGGTCACGTaGACCTTGGTCAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPHRMVT*TLVNVG
Trigger: TCCAACATTGACCAAGGTCCACGTGACCATTCTGTG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGGCAGCTGCACAGAATaGTCACGTGGACCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIGSCTE*SRGPWS
Trigger: TGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTTATGCACTGGTTTTaGCAGCTGCACAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLMHWF*QLHRMV
Trigger: GACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCCCCGACTATATGTTaGTTTGCTATCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSPTIC*FAIRLR
Trigger: CCTCAGCCTGATAGCAAACCAACATATAGTCGGGGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGTCACTGGCATCAAGTaGAGCTTTCAGAAAACGCCG +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSVTGIK*SFQKTP
Trigger: CGGCGTTTTCTGAAAGCTCCACTTGATGCCAGTGAC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACACAGGCGATGGCTCTaGAGATTGTCTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGHRRWL*RLSFSA
Trigger: TGCAGAAAAAGACAATCTCCAGAGCCATCGCCTGTG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACAGTCTGAGGATTTCTaGAAGAGTGCAGCTATCAAG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPQSEDF*KSAAIK
Trigger: CTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTAAGATGTGCAGTCTaGGGATTTCTGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLRCAV*GFLKEC
Trigger: GCACTCTTTCAGAAATCCTCAGACTGCACATCTTAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCTGCCTCTTTTATGTaGTCCTGGGTCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSASFM*SWVIFI
Trigger: GATGAAGATGACCCAGGATCACATAAAAGAGGCAGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp AGCCATCACAAAGAACCATGTTTTCAGCATCGCCTTTCTTTCGACATATCTTGCATGCCCTGCTCTATTTaGAAGAGTGCCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SHHKEPCFQHRLSFDISCMPCSI*KSAIAR
Trigger: TCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCAT...GCAAGATATGTCGAAAGAAAGGCGATGCTGAAAACATGGTTCTTTGTGATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATCTTCCTCCTCACTTTaGCCTTCTTCTTCATCGCCA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSSSSSL*PSSSSP
Trigger: TGGCGATGAAGAAGAAGGTCAAAGTGAGGAGGAAGA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGCTTGCAGTGGGCCATaGCTGTGGCGAGTAGAACGA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIACSGP*LWRVER
Trigger: TCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CAGCTTTTGCTTCACTTGTGTTACGAGGGTTGTATTCAAAGCAGTTCGAAAACAACAAAGTCAGATTCGTaGCTTTTTCGCAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: QLLLHLCYEGCIQSSSKTTKSDS*LFRSRW
Trigger: CCACCGGCTGCGAAAAAGTCACGAATCTGACTTTGT...TGTTTTCGAACTGCTTTGAATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGCGATCACGCCGACTaGCACTTGTCCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICDHAD*HLSTFS
Trigger: GGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCCACACAAGGCTGTTaGACAGAATGGTTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSTQGC*TEWFVQ
Trigger: TTGAACGAACCATTCTGTGCAACAGCCTTGTGTGGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCTACACTGCAACCTTaGACCATTGTTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPTLQP*TIVPND
Trigger: GTCATTAGGAACAATGGTGCAAGGTTGCAGTGTAGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACCAAACTTTTCAAACTaGAGCCCTGGTGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPPNFSN*SPGVTV
Trigger: CACAGTTACACCAGGGCTGCAGTTTGAAAAGTTTGG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCACTAGACTGGGATTaGTCAAACGAAGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSLDWD*SNEAPY
Trigger: GTATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAACGAATTCTGGCAGCTaGTTCTTCCCTCTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSTNSGS*FFPLFS
Trigger: CGAAAAGAGAGGGAAGAAGCAGCTGCCAGAATTCGT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTGAGATGGATCATATaGATTGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLRWII*IGRSSP
Trigger: CGGGGAAGATCTTCCAATGCATATGATCCATCTCAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGENAAQ*PALFER
Trigger: TCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATGTAAGCGCGAACGATaGGTAAGGCTGGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSCKRER*VRLVKY
Trigger: ATACTTGACCAGCCTTACCCATCGTTCGCGCTTACA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACACTGGTGTTGGTTCTaGAAGTTCCTTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPHWCWF*KFLKVI
Trigger: GATGACCTTAAGGAACTTCCAGAACCAACACCAGTG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAAGCAATTCACACAGTaGGCCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGKQFTQ*AFTVIS
Trigger: GGAAATGACAGTGAAGGCCCACTGTGTGAATTGCTT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACACAGAATGGTCACGTaGACCTTGGTCAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSHRMVT*TLVNVG
Trigger: TCCAACATTGACCAAGGTCCACGTGACCATTCTGTG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACTTATGCACTGGTTTTaGCAGCTGCACAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLMHWF*QLHRMV
Trigger: GACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAAAAGCACCACCGATTTaGCTTATGCACTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPKAPPI*LMHWFW
Trigger: CCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp AAAGGAGAGACTCTCTCCAACGGTCCAGAACTGTTTTATAAGAACGCCCACTGTCGCTACGATCCAAGGTaGATAGGTGAAGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: KGETLSNGPELFYKNAHCRYDPR*IGEEKL
Trigger: AAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCG...ACAGTGGGCGTTCTTATAAAACAGTTCTGGACCGTTGGAGAGAGTCTCTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCAGGTTCTTGTTGTTaGCCACGACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPGSCC*PRLEKE
Trigger: TTCTTTCTCAAGTCGTGGCCAACAACAAGAACCTGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAAGAAACAGTTGTTTTaGGTGTGCTCTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGKKQLF*VCSADS
Trigger: GGAGTCAGCAGAGCACACCCAAAACAACTGTTTCTT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATACATCTGCTTGCAGTaGGCCATGACTGTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIYICLQ*AMTVAS
Trigger: ACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACACAGGCGATGGCTCTaGAGATTGTCTTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSHRRWL*RLSFSA
Trigger: TGCAGAAAAAGACAATCTCCAGAGCCATCGCCTGTG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGACTCAAGTGCTTCCTaGTACGTCAGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIDSSAS*YVSPGL
Trigger: TAGACCTGGACTGACGTATCAGGAAGCACTTGAGTC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTAGCAAAACCATTTTaGTGTGATGGAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLAKPF*CDGGRT
Trigger: AGTCCTCCCTCCATCACATCAAAATGGTTTTGCTAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATCTGCCTCTTTTATGTaGTCCTGGGTCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSSASFM*SWVIFI
Trigger: GATGAAGATGACCCAGGATCACATAAAAGAGGCAGA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPSKVDR*RKTWDR
Trigger: TCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CCTATCACAGCCATCACAAAGAACCATGTTTTCAGCATCGCCTTTCTTTCGACATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: PITAITKNHVFSIAFLSTSKVDR*RKTWDR
Trigger: TCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGA...TGTCGAAAGAAAGGCGATGCTGAAAACATGGTTCTTTGTGATGGCTGTGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR TCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACATTACTGGGTGTaGCGTGGAGTCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPHYWV*RGVQAF
Trigger: AAAAGCTTGGACTCCACGTCACACCCAGTAATGTGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGAAACTAGTGACTGTCTaGGTCAGGACTGTCTATCAA +
Preference number: 4 (lower is better)
Translates to: LAHLATKIRWKTSDCLSQKLVTV*VRTVYQ
Trigger: TTGATAGACAGTCCTGACTCAGACAGTCACTAGTTT...CTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR GCA 90 bp CTATACCTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGCCTACACTGCAACCTTaGACCATTGTTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: LYLAHLATKIRWKTSDCLPTLQP*TIVPND
Trigger: GTCATTAGGAACAATGGTGCAAGGTTGCAGTGTAGG...CAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAGGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTCTTCTTCAGCTATTaGCTGGAAGATTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFFFSY*LEDCSQ
Trigger: CTGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTCTTCTTCAGCTATTaGCTGGAAGATTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPFFFSY*LEDCSQ
Trigger: CTGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATCAGCATCAGTTAGTTaGTCTTTGGCTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPSASVS*SLATSS
Trigger: AGAGGAAGTAGCCAAAGAGCAACTAACTGATGCTGA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATGCCAAAGATGCAACTaGAGACAGTGCAGATTTTGT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGCQRCN*RQCRFC
Trigger: ACAAAATCTGCACTGTCTGCAGTTGCATCTTTGGCA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATGCAGCTGCCAAAGATaGAACTGCAGACAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLICSCQR*NCRQCR
Trigger: TCTGCACTGTCTGCAGTTGCATCTTTGGCAGCTGCA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCTGAAGCTAAGATGTaGAGTCTGAGGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPEAKM*SLRISE
Trigger: TTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATCACTAGACTGGGATTaGTCAAACGAAGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSSLDWD*SNEAPY
Trigger: GTATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAATTCCCGGAACTCCTaGTTTGCCTGTCGTAATATA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGNSRNS*FACRNI
Trigger: TATATTACGACAGGCAAAGCAGGAGTTCCGGGAATT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAACTGGTTTTGGCAGCTaGACAGAATGGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLITGFGS*TEWSRG
Trigger: TCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACACCGATTTGGCTTATaGACTGGTTTTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIHRFGL*TGFGSC
Trigger: GCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGATAATGAACCACACTaGTCACTGATTGTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGDNEPH*SLIVVY
Trigger: GTACACCACAATCAGTGAGCAGTGTGGTTCATTATC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTCCACAAATACATCTaGTTGCAGTGGGCCATGACT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFHKYI*LQWAMT
Trigger: AGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CCAGCTTTTGCTTCACTTGTGTTACGAGGGTTGTATTCAAAGCAGTTCGAAAACCCTAGTTCCAGCTTTTaGTTCACTTGTGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: PAFASLVLRGLYSKQFENPSSSF*FTCVTR
Trigger: CCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGG...GTTTTCGAACTGCTTTGAATACAACCCTCGTAACACAAGTGAAGCAAAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAAATGACTCCATCTTGTaGTTCACAGTGTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPNDSIL*FTVLLQ
Trigger: CTGAAGCAACACTGTGAACCACAAGATGGAGTCATT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAAGCAATTCACACAGTaGGCCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSKQFTQ*AFTVIS
Trigger: GGAAATGACAGTGAAGGCCCACTGTGTGAATTGCTT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTCAAACTGCAGCCCTaGTGTAACTGTGGCCATGCA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFKLQP*CNCGHA
Trigger: TGCATGGCCACAGTTACACCAGGGCTGCAGTTTGAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGTTTCTTCACTAGACTaGGATTGCTCAAACGAAGCT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPVSSLD*DCSNEA
Trigger: AGCTTCGTTTGAGCAATCCCAGTCTAGTGAAGAAAC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAATTTGGCTTATGCACTaGTTTTGGCAGCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSIWLMH*FWQLHR
Trigger: TCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAAT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGTCACTGGCATCAAGTaGAGCTTTCAGAAAACGCCG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIVTGIK*SFQKTP
Trigger: CGGCGTTTTCTGAAAGCTCCACTTGATGCCAGTGAC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACGCTACGATCCAAGGTaGATAGGTGAAGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGRYDPR*IGEEKL
Trigger: AAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGGTGGTGTGCTAACTTaGTCCACATTACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIGGVLT*STLLGV
Trigger: CACACCCAGTAATGTGGACCAAGTTAGCACACCACC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTCCTGGGAAGTTTCTaGTCTACTTTCGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILLGSF*STFGSE
Trigger: TTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGGAAGATCTCGTTGGTaGCTTTACAGTAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGGRSRW*LYSRKL
Trigger: AAGTTTTCTACTGTAAAGTCACCAACGAGATCTTCC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTAGCAAAACCATTTTaGTGTGATGGAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLAKPF*CDGGRT
Trigger: AGTCCTCCCTCCATCACATCAAAATGGTTTTGCTAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTATACCTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGTTAGCAAAACCATTTTaGTGTGATGGAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LYLAHLATKIRWKTSDCLLAKPF*CDGGRT
Trigger: AGTCCTCCCTCCATCACATCAAAATGGTTTTGCTAA...CAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAGGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGACTGTACATTATTCTaGAATGATGAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGDCTLF*NDEGLG
Trigger: GCCTAGACCTTCATCATTTCAGAATAATGTACAGTC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSSKVDR*RKTWDR
Trigger: TCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTGTTGGCCACGACTTaGGAAAGAAGAGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLLATT*ERRAKF
Trigger: AAACTTAGCTCTTCTTTCTCAAGTCGTGGCCAACAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGGAGCAACCCCTCGTaGAGATTCAGAAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQWSNPS*RFRSIL
Trigger: GAGGATGCTTCTGAATCTTCACGAGGGGTTGCTCCA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR TCA 90 bp CTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGAGGGGAAACCCATTTTaGAAAGAACAGCTTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LAHLATKIRWKTSDCLSQRGNPF*KEQLCV
Trigger: AACACAAAGCTGTTCTTTTCAAAATGGGTTTCCCCT...CTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATCAGCATCAGTTAGTTaGTCTTTGGCTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSSASVS*SLATSS
Trigger: AGAGGAAGTAGCCAAAGAGCAACTAACTGATGCTGA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAATTCCCGGAACTCCTaGTTTGCCTGTCGTAATATA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSNSRNS*FACRNI
Trigger: TATATTACGACAGGCAAAGCAGGAGTTCCGGGAATT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAACGAATTCTGGCAGCTaGTTCTTCCCTCTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLITNSGS*FFPLFS
Trigger: CGAAAAGAGAGGGAAGAAGCAGCTGCCAGAATTCGT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTCAAGTTGCTTTTCTaGACACATCTGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFKLLF*THLRWI
Trigger: GATCCATCTCAGATGTGTGCAGAAAAGCAACTTGAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTGAAAGAGTGCCATTaGCAGATAATGAACCACACT +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLKECH*QIMNHT
Trigger: AGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTGAAAGAGTGCCATTaGCAGATAATGAACCACACT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLKECH*QIMNHT
Trigger: AGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAACCTTTTCTAAACTGTaGTATAGCGGAAGACTCATC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPTFSKL*YSGRLI
Trigger: GATGAGTCTTCCGCTATAGCACAGTTTAGAAAAGGT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAGTTTTCACTGGTGTTaGTTCTGGAAGTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSFHWC*FWKFLK
Trigger: CTTAAGGAACTTCCAGAACCAACACCAGTGAAAACT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACAGTTAGTTGCTCTTTaGCTACTTCCTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGQLVAL*LLPLLL
Trigger: AAGAAGAAGAGGAAGTAGCCAAAGAGCAACTAACTG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACCAAGGGAAAGATATTaGTACAGGCTATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSPRERY*YRLWHF
Trigger: AAAGTGCCATAGCCTGTACCAATATCTTTCCCTTGG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATCCCCGACTATATGTTaGTTTGCTATCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISPTIC*FAIRLR
Trigger: CCTCAGCCTGATAGCAAACCAACATATAGTCGGGGA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATCTAGAACGTTGCTTTaGTCGACATTCTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGSRTLL*STFWTK
Trigger: TTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCCTCTTGTTTTAACTaGCAATCTAACTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPSCFN*QSNLWS
Trigger: AGACCACAAGTTAGATTGCCAGTTAAAACAAGAGGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACAGTGTCACAGGCGATaGCTCTGGAGATTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIQCHRR*LWRLSF
Trigger: AAAAGACAATCTCCAGAGCCATCGCCTGTGACACTG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGATGTCATAGTAGTCTaGGACCTGGATTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGDVIVV*DLDFRN
Trigger: GTTTCTAAAATCCAGGTCCCAGACTACTATGACATC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGATGTCATAGTAGTCTaGGACCTGGATTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPDVIVV*DLDFRN
Trigger: GTTTCTAAAATCCAGGTCCCAGACTACTATGACATC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACTTTTTCGCAGCCGGTaGTGTGCTAACTTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILFRSR*CANLVH
Trigger: GTGGACCAAGTTAGCACACCACCGGCTGCGAAAAAG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGGCCACACTTTCATGTaGTCAATCAATTGTTATTGC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGGHTFM*SINCYC
Trigger: GCAATAACAATTGATTGACCACATGAAAGTGTGGCC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGTATACCTGGCACATCTaGCTACTAAAATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LAHLATKIRWKTSDCLSQYTWHI*LLKSDG
Trigger: TCCATCTGATTTTAGTAGCCAGATGTGCCAGGTATA...CTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGGAAGATCTCGTTGGTaGCTTTACAGTAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSGRSRW*LYSRKL
Trigger: AAGTTTTCTACTGTAAAGTCACCAACGAGATCTTCC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGACTCAAGTGCTTCCTaGTACGTCAGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIDSSAS*YVSPGL
Trigger: TAGACCTGGACTGACGTATCAGGAAGCACTTGAGTC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAGATATATCTGCCGTTaGATTTCTTTGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGRYICR*ISLLIF
Trigger: GAAGATGAGCAAAGAAATTCAACGGCAGATATATCT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGACTGTACATTATTCTaGAATGATGAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSDCTLF*NDEGLG
Trigger: GCCTAGACCTTCATCATTTCAGAATAATGTACAGTC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTTCTGCACACATCTaGGATGGATCATATGCATTG +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFSAHI*DGSYAL
Trigger: CAATGCATATGATCCATCTCAGATGTGTGCAGAAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTTCAGGCACAGTCTTaGGCTTTGGTCGAACACAGT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLQAQS*ALVEHS
Trigger: ACTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTCGTTTGGGTAGGCTaGCTTCTTCCTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLVWVG*LLPLLE
Trigger: CTCAAGAAGAGGAAGAAGTCAGCCTACCCAAACGAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAAAGCAGACAATTCATaGACTCCTCCCTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQKADNS*TPPCRP
Trigger: TGGCCGACAGGGAGGAGTTCATGAATTGTCTGCTTT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCACATTACTGGGTGTaGCGTGGAGTCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPHYWV*RGVQAF
Trigger: AAAAGCTTGGACTCCACGTCACACCCAGTAATGTGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAACAAAGTCAGATTCGTaGCTTTTTCGCAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFITKSDS*LFRSRW
Trigger: CCACCGGCTGCGAAAAAGTCACGAATCTGACTTTGT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAATCTACTTTCGGCTCTaGAGGAGGAAGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQIYFRL*RRKSCW
Trigger: CCAACAGCTCTTCCTCCTTCAGAGCCGAAAGTAGAT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATCCACACAAGGCTGTTaGACAGAATGGTTCGTTCAA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISTQGC*TEWFVQ
Trigger: TTGAACGAACCATTCTGTGCAACAGCCTTGTGTGGA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCTACACTGCAACCTTaGACCATTGTTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPTLQP*TIVPND
Trigger: GTCATTAGGAACAATGGTGCAAGGTTGCAGTGTAGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGCAGCTGCCAAAGATaGAACTGCAGACAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCSCQR*NCRQCR
Trigger: TCTGCACTGTCTGCAGTTGCATCTTTGGCAGCTGCA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAGTATCGTCTATACATaGGGTCGCGACCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISIVYT*GRDPRE
Trigger: TTCCCTTGGGTCGCGACCGCATGTATAGACGATACT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAGTATCGTCTATACATaGGGTCGCGACCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQSIVYT*GRDPRE
Trigger: TTCCCTTGGGTCGCGACCGCATGTATAGACGATACT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAACTGGTTTTGGCAGCTaGACAGAATGGTCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQTGFGS*TEWSRG
Trigger: TCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACACCGATTTGGCTTATaGACTGGTTTTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIHRFGL*TGFGSC
Trigger: GCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGACTATATGTTGGTTTaGTATCAGGCTGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSDYMLV*YQAEVC
Trigger: ACAAACCTCAGCCTGATAGCAAACCAACATATAGTC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTGAGATGGATCATATaGATTGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILRWII*IGRSSP
Trigger: CGGGGAAGATCTTCCAATGCATATGATCCATCTCAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTCAAGTTGCTTTTCTaGACACATCTGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFKLLF*THLRWI
Trigger: GATCCATCTCAGATGTGTGCAGAAAAGCAACTTGAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACTCTATTTGAAAGAGTaGCATTGCCAGATAATGAAC +
Preference number: 4 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPLYLKE*HCQIMN
Trigger: GTTCATTATCTGGCAATGGCACTCTTTCAAATAGAG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CCTATCACAGCCATCACAAAGAACCATGTTTTCAGCATCGCCTTTCTTTCGACACTCTATTTGAAAGAGTaGCATTGCCAGATAATGAAC +
Preference number: 4 (lower is better)
Translates to: PITAITKNHVFSIAFLSTLYLKE*HCQIMN
Trigger: GTTCATTATCTGGCAATGGCACTCTTTCAAATAGAG...TGTCGAAAGAAAGGCGATGCTGAAAACATGGTTCTTTGTGATGGCTGTGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIENAAQ*PALFER
Trigger: TCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCTAGTTCCAGCTTTTaGTTCACTTGTGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPSSSF*FTCVTR
Trigger: CCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAACCTTTTCTAAACTGTaGTATAGCGGAAGACTCATC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSTFSKL*YSGRLI
Trigger: GATGAGTCTTCCGCTATAGCACAGTTTAGAAAAGGT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGCCTCTCGGAGCTCCTaGGAAGTTTCTGATCTACTT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIASRSS*EVSDLL
Trigger: AAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACACTGGTGTTGGTTCTaGAAGTTCCTTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIHWCWF*KFLKVI
Trigger: GATGACCTTAAGGAACTTCCAGAACCAACACCAGTG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCTCTGTTAAATCTTTaGTGTCAGCATCAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPLLNL*CQHQLV
Trigger: AACTAACTGATGCTGACACCAAAGATTTAACAGAGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATCCTTTTACGAATTCTaGCAGCTGCTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISFYEF*QLLLPS
Trigger: AGAGGGAAGAAGCAGCTGCCAGAATTCGTAAAAGGA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAAAGCACCACCGATTTaGCTTATGCACTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIKAPPI*LMHWFW
Trigger: CCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGAGCTTCAATAAGCTaGTCTAGCTGTTCACAAGAA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSRASIS*SSCSQE
Trigger: TTCTTGTGAACAGCTAGACCAGCTTATTGAAGCTCT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAATGGATCATATGCATTaGAAGATCTTCCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSMDHMH*KIFPDY
Trigger: ATAGTCGGGGAAGATCTTCCAATGCATATGATCCAT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATGCACACATCTGAGATaGATCATATGCATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSCTHLR*IICIGR
Trigger: TCTTCCAATGCATATGATCCATCTCAGATGTGTGCA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGTCACTGGCATCAAGTaGAGCTTTCAGAAAACGCCG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIVTGIK*SFQKTP
Trigger: CGGCGTTTTCTGAAAGCTCCACTTGATGCCAGTGAC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAACGCCCACTGTCACTaGCATCAAGTGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFINAHCH*HQVELS
Trigger: TGAAAGCTCCACTTGATGCCAGTGACAGTGGGCGTT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACCCTCTTGTTTTAACTaGCAATCTAACTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSPSCFN*QSNLWS
Trigger: AGACCACAAGTTAGATTGCCAGTTAAAACAAGAGGG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGGTGGTGTGCTAACTTaGTCCACATTACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQGGVLT*STLLGV
Trigger: CACACCCAGTAATGTGGACCAAGTTAGCACACCACC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGGTGGTGTGCTAACTTaGTCCACATTACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIGGVLT*STLLGV
Trigger: CACACCCAGTAATGTGGACCAAGTTAGCACACCACC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGGCCACACTTTCATGTaGTCAATCAATTGTTATTGC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSGHTFM*SINCYC
Trigger: GCAATAACAATTGATTGACCACATGAAAGTGTGGCC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAATGCCCTGCTCTATTTaGAAGAGTGCCATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIMPCSI*KSAIAR
Trigger: TCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCAT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATCTTCCTCCTCACTTTaGCCTTCTTCTTCATCGCCA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISSSSL*PSSSSP
Trigger: TGGCGATGAAGAAGAAGGTCAAAGTGAGGAGGAAGA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTTGCTCCTATAACTTaGAAGAGTCTGTTTATTAGC +
Preference number: 4 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFAPIT*KSLFIS
Trigger: GCTAATAAACAGACTCTTGCAAGTTATAGGAGCAAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCTGAAGCTAAGATGTaGAGTCTGAGGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPEAKM*SLRISE
Trigger: TTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAACGAATTCTGGCAGCTaGTTCTTCCCTCTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFITNSGS*FFPLFS
Trigger: CGAAAAGAGAGGGAAGAAGCAGCTGCCAGAATTCGT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GCCTTTCTTTCGACATATCTTGCAACGCGCATTCAGTATAGATTTAGACCATATGATAATGAACCACACTaGTCACTGATTGTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: AFLSTYLATRIQYRFRPYDNEPH*SLIVVY
Trigger: GTACACCACAATCAGTGAGCAGTGTGGTTCATTATC...ATATGGTCTAAATCTATACTGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAGTCTTCTAGAACGTTaGTTTGGTCGACATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISLLER*FGRHSG
Trigger: TCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCAAACTTTTCAAACTaGAGCCTTTGGTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPNFSN*SLWCQH
Trigger: ATGCTGACACCAAAGGCTGCAGTTTGAAAAGTTTGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGTAAGCGCGAACGATaGGTAAGGCTGGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCKRER*VRLVKY
Trigger: ATACTTGACCAGCCTTACCCATCGTTCGCGCTTACA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAATGACTCCATCTTGTaGTTCACAGTGTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLINDSIL*FTVLLQ
Trigger: CTGAAGCAACACTGTGAACCACAAGATGGAGTCATT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACCTCTGTTAAATCTTTaGTGTCAGCATCAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSPLLNL*CQHQLV
Trigger: AACTAACTGATGCTGACACCAAAGATTTAACAGAGG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGTTTCTTCACTAGACTaGGATTGCTCAAACGAAGCT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIVSSLD*DCSNEA
Trigger: AGCTTCGTTTGAGCAATCCCAGTCTAGTGAAGAAAC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCAAGGGAAAGATATTaGTACAGGCTATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPRERY*YRLWHF
Trigger: AAAGTGCCATAGCCTGTACCAATATCTTTCCCTTGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGGTCACGTGGACCTTaGTCAATGTTGGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIWSRGP*SMLEVD
Trigger: ATCTACCTCCAACATTGACCAAGGTCCACGTGACCA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACACAGAATGGTCACGTaGACCTTGGTCAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQHRMVT*TLVNVG
Trigger: TCCAACATTGACCAAGGTCCACGTGACCATTCTGTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACTTATGCACTGGTTTTaGCAGCTGCACAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILMHWF*QLHRMV
Trigger: GACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATCCCCGACTATATGTTaGTTTGCTATCAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISPTIC*FAIRLR
Trigger: CCTCAGCCTGATAGCAAACCAACATATAGTCGGGGA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACGCTACGATCCAAGGTaGATAGGTGAAGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIRYDPR*IGEEKL
Trigger: AAGTTTTTCTTCACCTATCCACCTTGGATCGTAGCG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTGGATTCACTCTCTTaGAGAGAAAGTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLDSLS*RESFEA
Trigger: TGCTTCAAAACTTTCTCTCCAAGAGAGTGAATCCAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACAGTGTCACAGGCGATaGCTCTGGAGATTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQQCHRR*LWRLSF
Trigger: AAAAGACAATCTCCAGAGCCATCGCCTGTGACACTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATCAAACTGCAGCCTTTaGTGTCAGCATCAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISNCSL*CQHQLV
Trigger: AACTAACTGATGCTGACACCAAAGGCTGCAGTTTGA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR CCA 90 bp CTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGGACTGTCTATTTTCTTCCTATACCTaGCACATCTGGCTACTAAAA +
Preference number: 4 (lower is better)
Translates to: LATKIRWKTSDCLSQDCLFSSYT*HIWLLK
Trigger: TTTTAGTAGCCAGATGTGCCAGGTATAGGAAGAAAA...TAGACAGTCCTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553573.1
3UTR CAA 72 bp ACCATGTTTTCAGCATCGCCTTTCTTTCGACATATCTaGCAACGCGCATTCAGTATAGATTTAGACCATATC +
Preference number: 4 (lower is better)
Translates to: TMFSASPFFRHI*QRAFSIDLDHI
Trigger: GATATGGTCTAAATCTATACTGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGCGATGCTGAAAACATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR TCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGGAAGATCTCGTTGGTaGCTTTACAGTAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIGRSRW*LYSRKL
Trigger: AAGTTTTCTACTGTAAAGTCACCAACGAGATCTTCC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACAGTCTGAGGATTTCTaGAAGAGTGCAGCTATCAAG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQQSEDF*KSAAIK
Trigger: CTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACAGTCTGAGGATTTCTaGAAGAGTGCAGCTATCAAG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIQSEDF*KSAAIK
Trigger: CTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACTAAGATGTGCAGTCTaGGGATTTCTGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILRCAV*GFLKEC
Trigger: GCACTCTTTCAGAAATCCTCAGACTGCACATCTTAG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATCTGCCTCTTTTATGTaGTCCTGGGTCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISASFM*SWVIFI
Trigger: GATGAAGATGACCCAGGATCACATAAAAGAGGCAGA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACCTACACTGCAACCTTaGACCATTGTTCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQPTLQP*TIVPND
Trigger: GTCATTAGGAACAATGGTGCAAGGTTGCAGTGTAGG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTGCTCCTATAACTTaGAAGAGTCTGTTTATTAGC +
Preference number: 4 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFAPIT*KSLFIS
Trigger: GCTAATAAACAGACTCTTGCAAGTTATAGGAGCAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAGATTTTGTGGGGTCTaGATCTTCATCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQRFCGV*IFIQSL
Trigger: GAGGCTTTGGATGAAGATGCAGACCCCACAAAATCT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCAAACTTTTCAAACTaGAGCCCTGGTGTAACTGTG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPNFSN*SPGVTV
Trigger: CACAGTTACACCAGGGCTGCAGTTTGAAAAGTTTGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGGATTTCTGAAAGAGTaGAGCTATCAAGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIGFLKE*SYQDPN
Trigger: GTTTGGATCTTGATAGCTGCACTCTTTCAGAAATCC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGACTATATGTTGGTTTaGTATCAGGCTGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIDYMLV*YQAEVC
Trigger: ACAAACCTCAGCCTGATAGCAAACCAACATATAGTC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTGAGATGGATCATATaGATTGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLRWII*IGRSSP
Trigger: CGGGGAAGATCTTCCAATGCATATGATCCATCTCAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GCCTTTCTTTCGACATATCTTGCAACGCGCATTCAGTATAGATTTAGACCATATTTGAAAGAGTGCCATTaGCAGATAATGAACCACACT +
Preference number: 4 (lower is better)
Translates to: AFLSTYLATRIQYRFRPYLKECH*QIMNHT
Trigger: AGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAA...ATATGGTCTAAATCTATACTGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTCCACAAATACATCTaGTTGCAGTGGGCCATGACT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFHKYI*LQWAMT
Trigger: AGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTCCACAAATACATCTaGTTGCAGTGGGCCATGACT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFHKYI*LQWAMT
Trigger: AGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACCTAGTTCCAGCTTTTaGTTCACTTGTGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQPSSSF*FTCVTR
Trigger: CCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCTAGTTCCAGCTTTTaGTTCACTTGTGTTACGAGG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPSSSF*FTCVTR
Trigger: CCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACACTGGTGTTGGTTCTaGAAGTTCCTTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQHWCWF*KFLKVI
Trigger: GATGACCTTAAGGAACTTCCAGAACCAACACCAGTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAGTTTTCACTGGTGTTaGTTCTGGAAGTTCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLISFHWC*FWKFLK
Trigger: CTTAAGGAACTTCCAGAACCAACACCAGTGAAAACT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAAGCAATTCACACAGTaGGCCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQKQFTQ*AFTVIS
Trigger: GGAAATGACAGTGAAGGCCCACTGTGTGAATTGCTT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATCCTTTTACGAATTCTaGCAGCTGCTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQSFYEF*QLLLPS
Trigger: AGAGGGAAGAAGCAGCTGCCAGAATTCGTAAAAGGA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAATTTGGCTTATGCACTaGTTTTGGCAGCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQIWLMH*FWQLHR
Trigger: TCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAAT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAAAGCACCACCGATTTaGCTTATGCACTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIKAPPI*LMHWFW
Trigger: CCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAATGGATCATATGCATTaGAAGATCTTCCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIMDHMH*KIFPDY
Trigger: ATAGTCGGGGAAGATCTTCCAATGCATATGATCCAT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATGCACACATCTGAGATaGATCATATGCATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLICTHLR*IICIGR
Trigger: TCTTCCAATGCATATGATCCATCTCAGATGTGTGCA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCCTCTTGTTTTAACTaGCAATCTAACTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPSCFN*QSNLWS
Trigger: AGACCACAAGTTAGATTGCCAGTTAAAACAAGAGGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCAGGTTCTTGTTGTTaGCCACGACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPGSCC*PRLEKE
Trigger: TTCTTTCTCAAGTCGTGGCCAACAACAAGAACCTGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAAGAAACAGTTGTTTTaGGTGTGCTCTGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQKKQLF*VCSADS
Trigger: GGAGTCAGCAGAGCACACCCAAAACAACTGTTTCTT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAGATGTCATAGTAGTCTaGGACCTGGATTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIDVIVV*DLDFRN
Trigger: GTTTCTAAAATCCAGGTCCCAGACTACTATGACATC...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTTCCCTATCAAAATTaGAGGGAAAGGAAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLPYQN*RERKAG
Trigger: ACCGGCTTTCCTTTCCCTCCAATTTTGATAGGGAAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382422.6
3UTR CAA 72 bp CTAGTTCCAGCTTTTGCTTCACTTGTGTTACGAGGGTaGTATTCAAAGCAGTTCGAAAACATTAACTCAATG +
Preference number: 4 (lower is better)
Translates to: LVPAFASLVLRG*YSKQFENINSM
Trigger: CATTGAGTTAATGTTTTCGAACTGCTTTGAATACAACCCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTAGCAAAACCATTTTaGTGTGATGGAGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLAKPF*CDGGRT
Trigger: AGTCCTCCCTCCATCACATCAAAATGGTTTTGCTAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATCCAAGGTGGATAGGTaGAGAAAAACTTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQSKVDR*RKTWDR
Trigger: TCTATCCCAAGTTTTTCTTCACCTATCCACCTTGGA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTGTTGGCCACGACTTaGGAAAGAAGAGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLLATT*ERRAKF
Trigger: AAACTTAGCTCTTCTTTCTCAAGTCGTGGCCAACAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTATTGGCTACTCGATaGCTTTTACAGCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILLATR*LLQPVT
Trigger: AGTGACAGGCTGTAAAAGTCATCGAGTAGCCAATAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTCTTCTTCAGCTATTaGCTGGAAGATTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFFFSY*LEDCSQ
Trigger: CTGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACCTGAAGCTAAGATGTaGAGTCTGAGGATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQPEAKM*SLRISE
Trigger: TTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAATTCCCGGAACTCCTaGTTTGCCTGTCGTAATATA +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQNSRNS*FACRNI
Trigger: TATATTACGACAGGCAAAGCAGGAGTTCCGGGAATT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGATAATGAACCACACTaGTCACTGATTGTGGTGTAC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQDNEPH*SLIVVY
Trigger: GTACACCACAATCAGTGAGCAGTGTGGTTCATTATC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTCTATTTGAAAGAGTaGCATTGCCAGATAATGAAC +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILYLKE*HCQIMN
Trigger: GTTCATTATCTGGCAATGGCACTCTTTCAAATAGAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAGTCTTCTAGAACGTTaGTTTGGTCGACATTCTGGA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISLLER*FGRHSG
Trigger: TCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGTTTCTTCACTAGACTaGGATTGCTCAAACGAAGCT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQVSSLD*DCSNEA
Trigger: AGCTTCGTTTGAGCAATCCCAGTCTAGTGAAGAAAC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACCAAGGGAAAGATATTaGTACAGGCTATGGCACTTT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQPRERY*YRLWHF
Trigger: AAAGTGCCATAGCCTGTACCAATATCTTTCCCTTGG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTGGATTCACTCTCTTaGAGAGAAAGTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILDSLS*RESFEA
Trigger: TGCTTCAAAACTTTCTCTCCAAGAGAGTGAATCCAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGACTGTACATTATTCTaGAATGATGAAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIDCTLF*NDEGLG
Trigger: GCCTAGACCTTCATCATTTCAGAATAATGTACAGTC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTTTCTGCACACATCTaGGATGGATCATATGCATTG +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFSAHI*DGSYAL
Trigger: CAATGCATATGATCCATCTCAGATGTGTGCAGAAAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTTTCTGCACACATCTaGGATGGATCATATGCATTG +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFSAHI*DGSYAL
Trigger: CAATGCATATGATCCATCTCAGATGTGTGCAGAAAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAGCATCCTCCATGTTTaGGATTATCAGCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQSILHV*DYQPKD
Trigger: ATCTTTTGGCTGATAATCTCAAACATGGAGGATGCT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGACTATATGTTGGTTTaGTATCAGGCTGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQDYMLV*YQAEVC
Trigger: ACAAACCTCAGCCTGATAGCAAACCAACATATAGTC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTCAAGTTGCTTTTCTaGACACATCTGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFKLLF*THLRWI
Trigger: GATCCATCTCAGATGTGTGCAGAAAAGCAACTTGAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTGAAAGAGTGCCATTaGCAGATAATGAACCACACT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLKECH*QIMNHT
Trigger: AGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAACCTTTTCTAAACTGTaGTATAGCGGAAGACTCATC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQTFSKL*YSGRLI
Trigger: GATGAGTCTTCCGCTATAGCACAGTTTAGAAAAGGT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACAGTTAGTTGCTCTTTaGCTACTTCCTCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQQLVAL*LLPLLL
Trigger: AAGAAGAAGAGGAAGTAGCCAAAGAGCAACTAACTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAGAGCTTCAATAAGCTaGTCTAGCTGTTCACAAGAA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIRASIS*SSCSQE
Trigger: TTCTTGTGAACAGCTAGACCAGCTTATTGAAGCTCT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAATGGATCATATGCATTaGAAGATCTTCCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIMDHMH*KIFPDY
Trigger: ATAGTCGGGGAAGATCTTCCAATGCATATGATCCAT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGCACACATCTGAGATaGATCATATGCATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICTHLR*IICIGR
Trigger: TCTTCCAATGCATATGATCCATCTCAGATGTGTGCA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATCTAGAACGTTGCTTTaGTCGACATTCTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISRTLL*STFWTK
Trigger: TTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR TCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAGATATATCTGCCGTTaGATTTCTTTGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQRYICR*ISLLIF
Trigger: GAAGATGAGCAAAGAAATTCAACGGCAGATATATCT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGTGGTTCACAGTGTTaGTTCAGAAAAAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCGSQC*FRKSFS
Trigger: ACTAAAGCTTTTTCTGAAGCAACACTGTGAACCACA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR GCA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGTGGTTCACAGTGTTaGTTCAGAAAAAGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICGSQC*FRKSFS
Trigger: ACTAAAGCTTTTTCTGAAGCAACACTGTGAACCACA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CCA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTTCTACCTTTTTATTaGCTACTCGATGACTTTTAC +
Preference number: 4 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLLPFY*LLDDFY
Trigger: GTAAAAGTCATCGAGTAGCCAATAAAAAGGTAGAAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS TCA 90 bp GGCCGGTCCGCGCGCTGGGAGAAGCTCGGCTGCCTTTTGTGTGACTaGCGCGCCGCGGCCGCTACCGGAGCCGAGTTCGTTCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: GRSARWEKLGCLLCD*RAAAATGAEFVPAA
Trigger: AGCGGCAGGAACGAACTCGGCTCCGGTAGCGGCCGCGGCGCGTCAGTCACACAAAAGGCAGCCGAGCTTCTCCCAGCGCGCGGACCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS TCA 90 bp CGTGGGCCGGTCCGCGCGCTGGGAGAAGCTCGGCTGCCTTTTGTGTaGCTGACGCGCCGCGGCCGCTACCGGAGCCGAGTTCGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RGPVRALGEARLPFV*LTRRGRYRSRVRSC
Trigger: GCAGGAACGAACTCGGCTCCGGTAGCGGCCGCGGCGCGTCAGTCACACAAAAGGCAGCCGAGCTTCTCCCAGCGCGCGGACCGGCCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS GCA 90 bp GCTGCCGCTTCTCCCGCTGCCACTGCCCGACTCCGCGCGGGGAATTaGGTCCCACCGCCACTTCCCCGCCTCTCGGAGCTCCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: AAASPAATARLRAGN*VPPPLPRLSELLGS
Trigger: ACTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGGCGGTGGGACGCAATTCCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS GCA 90 bp CGGGCTCGCCTGGACCCTCGGCCGCCCGCGCCGGCCCCGCTTCCCTaGGATCACGCCGACTGCCACTTGTCCACCTTCTCCACTACAAAG +
Preference number: 5 (lower is better)
Translates to: RARLDPRPPAPAPLP*DHADCHLSTFSTTK
Trigger: CTTTGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCAGGGAAGCGGGGCCGGCGCGGGCGGCCGAGGGTCCAGGCGAGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS CCA 90 bp CCCCGCTTCCCTATCAAAATTGGAGGGAAAGGAAAGCCGGTAAGGTaGGGAGCCCTCGGCGGCAGCGTGGGCCGGTCCGCGCGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PRFPIKIGGKGKPVR*GALGGSVGRSARWE
Trigger: CTCCCAGCGCGCGGACCGGCCCACGCTGCCGCCGAGGGCTCCCCACCTTACCGGCTTTCCTTTCCCTCCAATTTTGATAGGGAAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS TCA 90 bp GTCCCACCGCCACTTCCCCGCCTCTCGGAGCTCCTGGGAAGTTTCTaGTCTACTTTCGGCTCTGAAGGAGGAAGAGCTGTTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VPPPLPRLSELLGSF*STFGSEGGRAVGRS
Trigger: GCTCCTCCCAACAGCTCTTCCTCCTTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGGCGGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAACTCCGCGCGGGGAATaGCGTCCCACCGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPTPRGE*RPTATS
Trigger: GGAAGTGGCGGTGGGACGCAATTCCCCGCGCGGAGT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAACTCCGCGCGGGGAATaGCGTCCCACCGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLITPRGE*RPTATS
Trigger: GGAAGTGGCGGTGGGACGCAATTCCCCGCGCGGAGT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS GCA 90 bp GCCTCTGCGTTTTCTACGAGGACTAAGCAATTCCACAAATACATCTaGTTGCAGTGGGCCATGACTGTGGCGAGTAGAACGACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: ASAFSTRTKQFHKYI*LQWAMTVASRTTGN
Trigger: ATTGCCAGTCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAATTGCTTAGTCCTCGTAGAAAACGCAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp CACCACCGATTTGGCTTATGCACTGGTTTTGGCAGCTGCACAGAATaGTCACGTGGACCTTGGTCAATGTTGGAGGTAGATTCAGACATC +
Preference number: 5 (lower is better)
Translates to: HHRFGLCTGFGSCTE*SRGPWSMLEVDSDI
Trigger: GATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp AGACTCTCTCCAACGGTCCAGAACTGTTTTATAAGAACGCCCACTGTCACTGGCAATGCCCTGCTCTATTaGAAAGAGTGCCATTGCCAG +
Preference number: 5 (lower is better)
Translates to: RLSPTVQNCFIRTPTVTGNALLY*KECHCQ
Trigger: CTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATT...GCCAGTGACAGTGGGCGTTCTTATAAAACAGTTCTGGACCGTTGGAGAGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS GCA 90 bp CACTGTCACTGGCATCAAGTGGAGCTTTCAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGAGTGCCATTGCCAGATAATGAACCA +
Preference number: 5 (lower is better)
Translates to: HCHWHQVELSENAAQ*PALFERVPLPDNEP
Trigger: TGGTTCATTATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGATGCCAGTGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS GCA 90 bp CTTTCCAAGGATGGTCTCTGTCTAGAGGAGAGTCTTCTAGAACGTTaGTTTGGTCGACATTCTGGACAAAACCAGTCTCCTTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LSKDGLCLEESLLER*FGRHSGQNQSPSGT
Trigger: TGTGCCTGAAGGAGACTGGTTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTCTCCTCTAGACAGAGACCATCCTTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp TTATGCACTGGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTTaGTCAATGTTGGAGGTAGATTCAGACATCAAAGGCTCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LCTGFGSCTEWSRGP*SMLEVDSDIKGSPV
Trigger: AACTGGAGAGCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp ATTTGGCTTATGCACTGGTTTTGGCAGCTGCACAGAATGGTCACGTaGACCTTGGTCAATGTTGGAGGTAGATTCAGACATCAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: IWLMHWFWQLHRMVT*TLVNVGGRFRHQRL
Trigger: GAGCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp ACAAGAACTGTAAAAGCACCACCGATTTGGCTTATGCACTGGTTTTaGCAGCTGCACAGAATGGTCACGTGGACCTTGGTCAATGTTGGA +
Preference number: 5 (lower is better)
Translates to: TRTVKAPPIWLMHWF*QLHRMVTWTLVNVG
Trigger: TCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp CTGTTCACAAGAACTGTAAAAGCACCACCGATTTGGCTTATGCACTaGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LFTRTVKAPPIWLMH*FWQLHRMVTWTLVN
Trigger: ATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCTTGTGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 90 bp CAAGGATGGTCTCTGTCTAGAGGAGAGTCTTCTAGAACGTTGCTTTaGTCGACATTCTGGACAAAACCAGTCTCCTTCAGGCACAGTCTT +
Preference number: 5 (lower is better)
Translates to: QGWSLSRGESSRTLL*STFWTKPVSFRHSL
Trigger: AAGACTGTGCCTGAAGGAGACTGGTTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTCTCCTCTAGACAGAGACCATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGTGGTCTTCCTCGTTaGGGTAGGCTGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPCGLPR*GRLTSS
Trigger: GGAAGAAGTCAGCCTACCCAAACGAGGAAGACCACA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATGTGGTCTTCCTCGTTaGGGTAGGCTGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGCGLPR*GRLTSS
Trigger: GGAAGAAGTCAGCCTACCCAAACGAGGAAGACCACA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCACGGTGGTGTGCTAACTaGGTCCACATTACTGGGTGT +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPRWCAN*VHITGC
Trigger: ACACCCAGTAATGTGGACCAAGTTAGCACACCACCG...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTCCACACAAGGCTGTaGCACAGAATGGTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLHTRL*HRMVRS
Trigger: TGAACGAACCATTCTGTGCAACAGCCTTGTGTGGAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAATGGTCACGTGGACCTaGGTCAATGTTGGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPMVTWT*VNVGGR
Trigger: TCTACCTCCAACATTGACCAAGGTCCACGTGACCAT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGCTTATGCACTGGTTTaGGCAGCTGCACAGAATGGT +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPAYALV*AAAQNG
Trigger: ACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACCTTCAGGCACAGTCTaGAGCTTTGGTCGAACACAG +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSPSGTV*SFGRTQ
Trigger: CTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAGG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp AGCCATCACAAAGAACCATGTTTTCAGCATCGCCTTTCTTTCGACATATCTTGCCCTTCAGGCACAGTCTaGAGCTTTGGTCGAACACAG +
Preference number: 5 (lower is better)
Translates to: SHHKEPCFQHRLSFDISCPSGTV*SFGRTQ
Trigger: CTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAGG...GCAAGATATGTCGAAAGAAAGGCGATGCTGAAAACATGGTTCTTTGTGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGCTCTGCTGACTCCTaGAAGGGTATCTTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPCSADS*KGIFQV
Trigger: AACCTGGAAGATACCCTTCAAGGAGTCAGCAGAGCA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACACAAATACATCTGCTaGCAGTGGGCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGHKYIC*QWAMTV
Trigger: CACAGTCATGGCCCACTGCAAGCAGATGTATTTGTG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGTCTGGCACAGACTCTaGACTACACGATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGVWHRL*TTRWEK
Trigger: CTTTTCCCATCGTGTAGTCAAGAGTCTGTGCCAGAC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGCTTCCCTATCAAAATaGGAGGGAAAGGAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGASLSK*EGKESR
Trigger: CCGGCTTTCCTTTCCCTCCAATTTTGATAGGGAAGC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACCCAAGGGAAAGATATaGGTACAGGCTATGGCACTT +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGPKGKI*VQAMAL
Trigger: AAGTGCCATAGCCTGTACCAATATCTTTCCCTTGGG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGGACCTTGGTCAATGTaGGAGGTAGATTCAGACATC +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPGPWSM*EVDSDI
Trigger: GATGTCTGAATCTACCTCCAACATTGACCAAGGTCC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGCTTATGCACTGGTTTaGGCAGCTGCACAGAATGGT +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSAYALV*AAAQNG
Trigger: ACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAGAGTCTTCTAGAACGTaGCTTTGGTCGACATTCTGG +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPESSRT*LWSTFW
Trigger: CCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTC...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAAACTGGCAATCTAACTaGTGGTCTTCCTCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPNWQSN*WSSSFG
Trigger: CCCAAACGAGGAAGACCACAAGTTAGATTGCCAGTT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAACTGGCAATCTAACTaGTGGTCTTCCTCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGNWQSN*WSSSFG
Trigger: CCCAAACGAGGAAGACCACAAGTTAGATTGCCAGTT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACACAAATACATCTGCTaGCAGTGGGCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSHKYIC*QWAMTV
Trigger: CACAGTCATGGCCCACTGCAAGCAGATGTATTTGTG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 90 bp CGAGGACTAAGCAATTCCACAAATACATCTGCTTGCAGTGGGCCATaGCTGTGGCGAGTAGAACGACTGGCAATTCTTAAAGATTTTGTT +
Preference number: 5 (lower is better)
Translates to: RGLSNSTNTSACSGP*LWRVERLAILKDFV
Trigger: AACAAAATCTTTAAGAATTGCCAGTCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAATTGCTTAGTCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACACGCCGACTGCCACTaGTCCACCTTCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIHADCH*STFSTT
Trigger: TGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATGCAACCTTGCACCATaGTTCCTAATGACTTCCACA +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPCNLAP*FLMTST
Trigger: TGTGGAAGTCATTAGGAACAATGGTGCAAGGTTGCA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTTCTTCTTCAGCTATaGCCTGGAAGATTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLLLQL*PGRLQS
Trigger: TGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTCACTAGACTGGGATaGCTCAAACGAAGCTCCATA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFTRLG*LKRSSI
Trigger: TATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACATACACTGAGGTGCTaGACAGTTTCTTCACTAGAC +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGHTLRC*TVSSLD
Trigger: GTCTAGTGAAGAAACTGTCAAGCACCTCAGTGTATG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACCCAAGGGAAAGATATaGGTACAGGCTATGGCACTT +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSPKGKI*VQAMAL
Trigger: AAGTGCCATAGCCTGTACCAATATCTTTCCCTTGGG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGGACCTTGGTCAATGTaGGAGGTAGATTCAGACATC +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSGPWSM*EVDSDI
Trigger: GATGTCTGAATCTACCTCCAACATTGACCAAGGTCC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAAAAAGCACCACCGATTaGGCTTATGCACTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGKSTTD*AYALVL
Trigger: CAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTT...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCAAAAAGCACCACCGATTaGGCTTATGCACTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPKSTTD*AYALVL
Trigger: CAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTT...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTCCCCGACTATATGTaGGTTTGCTATCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFPDYM*VCYQAE
Trigger: CTCAGCCTGATAGCAAACCAACATATAGTCGGGGAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAATGCCCTGCTCTATTaGAAAGAGTGCCATTGCCAG +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSNALLY*KECHCQ
Trigger: CTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATT...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 90 bp TTCTACCTTTTTATTGGCTACTCGATGACTTTTACAGCCTGTCACTaGTACAGGAAGAGACAGCGGAGAGCCTGGGAGAACTACATTATT +
Preference number: 5 (lower is better)
Translates to: FYLFIGYSMTFTACH*YRKRQRRAWENYII
Trigger: AATAATGTAGTTCTCCCAGGCTCTCCGCTGTCTCTTCCTGTATCAGTGACAGGCTGTAAAAGTCATCGAGTAGCCAATAAAAAGGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS GCA 90 bp AAAACAGATACTTACCAAGTGGAGCTTTCAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGAGTGCCATTGCCAGATAATGAACCA +
Preference number: 5 (lower is better)
Translates to: KTDTYQVELSENAAQ*PALFERVPLPDNEP
Trigger: TGGTTCATTATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGGTAAGTATCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554391.1
CDS CCA 90 bp GTTCAAGTTGCTTTTCTGCACACATCTGAGATGGATCATATGCATTaGAAGATCTTCCCCGACTATATGTTGGTTTGCTATCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VQVAFLHTSEMDHMH*KIFPDYMLVCYQAE
Trigger: CTCAGCCTGATAGCAAACCAACATATAGTCGGGGAAGATCTTCCAATGCATATGATCCATCTCAGATGTGTGCAGAAAAGCAACTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTCCACACAAGGCTGTaGCACAGAATGGTTCGTTCA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILHTRL*HRMVRS
Trigger: TGAACGAACCATTCTGTGCAACAGCCTTGTGTGGAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTATACCTGGCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGTGCAACCTTGCACCATaGTTCCTAATGACTTCCACA +
Preference number: 5 (lower is better)
Translates to: LYLAHLATKIRWKTSDCLCNLAP*FLMTST
Trigger: TGTGGAAGTCATTAGGAACAATGGTGCAAGGTTGCA...CAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGCCAGGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACTAATATGTATTCGTTaGGGAGGTCTCCCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLICIR*GGLPLR
Trigger: ACGAAGAGGGAGACCTCCCAAACGAATACATATTAG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACTTCTTCTTCAGCTATaGCCTGGAAGATTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSLLLQL*PGRLQS
Trigger: TGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAAG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGAGCCTCTGTTAAATCTTaGGTGTCAGCATCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGASVKS*VSASVS
Trigger: ACTAACTGATGCTGACACCAAAGATTTAACAGAGGC...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCACATACACTGAGGTGCTaGACAGTTTCTTCACTAGAC +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSHTLRC*TVSSLD
Trigger: GTCTAGTGAAGAAACTGTCAAGCACCTCAGTGTATG...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAGATGGATCATATGCATaGGAAGATCTTCCCCGACTA +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSDGSYA*EDLPRL
Trigger: TAGTCGGGGAAGATCTTCCAATGCATATGATCCATC...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CGCGCATTCAGTATAGATTTAGACCATATCACGCTACGATCCAAGGTGGATAGGCTGATTGTGGTGTACTaGCATTTGTTGATACAGTAC +
Preference number: 5 (lower is better)
Translates to: RAFSIDLDHITLRSKVDRLIVVY*HLLIQY
Trigger: GTACTGTATCAACAAATGCAAGTACACCACAATCAG...CCTATCCACCTTGGATCGTAGCGTGATATGGTCTAAATCTATACTGAATGCGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTTGAAAGAGTGCCATaGCCAGATAATGAACCACAC +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPFERVP*PDNEPH
Trigger: GTGTGGTTCATTATCTGGCAATGGCACTCTTTCAAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAACCATGTTTTCAGCATCGCCTTTCTTTCGACATATCTTGCAACGCGCATTCATTTGAAAGAGTGCCATaGCCAGATAATGAACCACAC +
Preference number: 5 (lower is better)
Translates to: EPCFQHRLSFDISCNAHSFERVP*PDNEPH
Trigger: GTGTGGTTCATTATCTGGCAATGGCACTCTTTCAAA...TGAATGCGCGTTGCAAGATATGTCGAAAGAAAGGCGATGCTGAAAACATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR CAA 90 bp CGCGCATTCAGTATAGATTTAGACCATATCACGCTACGATCCAAGGTGGATAGGTTCTTTCGACATATCTaGCAACGCGCATTCAGTATA +
Preference number: 5 (lower is better)
Translates to: RAFSIDLDHITLRSKVDRFFRHI*QRAFSI
Trigger: TATACTGAATGCGCGTTGCAAGATATGTCGAAAGAA...CCTATCCACCTTGGATCGTAGCGTGATATGGTCTAAATCTATACTGAATGCGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACACAAATACATCTGCTaGCAGTGGGCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIHKYIC*QWAMTV
Trigger: CACAGTCATGGCCCACTGCAAGCAGATGTATTTGTG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTTGTGTTACGAGGGTaGTATTCAAAGCAGTTCGAA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLVLRG*YSKQFE
Trigger: TTCGAACTGCTTTGAATACAACCCTCGTAACACAAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACAGCTTTTGCTTCACTaGTGTTACGAGGGTTGTATT +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGQLLLH*CYEGCI
Trigger: AATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCACTTGTGTTACGAGGGTTGTATTCAAAGCAGTTCGAAAACATTAACTCAATGCGGTGGTGTGCTAACTaGGTCCACATTACTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SLVLRGLYSKQFENINSMRWCAN*VHITGC
Trigger: ACACCCAGTAATGTGGACCAAGTTAGCACACCACCG...CATTGAGTTAATGTTTTCGAACTGCTTTGAATACAACCCTCGTAACACAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTCAAACTGCAGCCTTaGGTGTCAGCATCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFKLQP*VSASVS
Trigger: ACTAACTGATGCTGACACCAAAGGCTGCAGTTTGAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS-3UTR CAA 90 bp GCACATCTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGGACCAGGGGAAACCCATTTaGAAAAGAACAGCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: AHLATKIRWKTSDCLSQDQGKPI*KRTALC
Trigger: ACACAAAGCTGTTCTTTTCAAAATGGGTTTCCCCTG...GTCCTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAGATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATTTTCTCCGGCTGATTaGTGTTGCTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPFSPAD*CCFNNS
Trigger: GCTATTGTTAAAGCAACACAAATCAGCCGGAGAAAA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTTAATGACTCCATCTaGTGGTTCACAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFNDSI*WFTVLL
Trigger: AAGCAACACTGTGAACCACAAGATGGAGTCATTAAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCCGGAACTCCTGCTTaGCCTGTCGTAATATATCAA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPGTPA*PVVIYQ
Trigger: TTGATATATTACGACAGGCAAAGCAGGAGTTCCGGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTTTGCTCTGTGTCTTaGCTCTCAATGCTAGTATCA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFCSVS*LSMLVS
Trigger: TGATACTAGCATTGAGAGCAAAGACACAGAGCAAAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCACCATCTCTTGTTACACAGTaGATCTGTTCTTGCCTTGTA +
Preference number: 5 (lower is better)
Translates to: LCYSGRLIHVDNSPLIPPSLVTQ*ICSCLV
Trigger: TACAAGGCAAGAACAGATCAACTGTGTAACAAGAGA...TGGTGGTATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACCCAAGGGAAAGATATaGGTACAGGCTATGGCACTT +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIPKGKI*VQAMAL
Trigger: AAGTGCCATAGCCTGTACCAATATCTTTCCCTTGGG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGACTGATTGTGGTGTACTaGCATTTGTTGATACAGTAC +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGLIVVY*HLLIQY
Trigger: GTACTGTATCAACAAATGCAAGTACACCACAATCAG...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTGAAAGAGTGCCATaGCCAGATAATGAACCACAC +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFERVP*PDNEPH
Trigger: GTGTGGTTCATTATCTGGCAATGGCACTCTTTCAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAATGCCCTGCTCTATTaGAAAGAGTGCCATTGCCAG +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLINALLY*KECHCQ
Trigger: CTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCTTCAGGCACAGTCTaGAGCTTTGGTCGAACACAG +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPSGTV*SFGRTQ
Trigger: CTGTGTTCGACCAAAGCTCAAGACTGTGCCTGAAGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGTGGTCTTCCTCGTTaGGGTAGGCTGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICGLPR*GRLTSS
Trigger: GGAAGAAGTCAGCCTACCCAAACGAGGAAGACCACA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATAAACTGGCAATCTAACTaGTGGTCTTCCTCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLINWQSN*WSSSFG
Trigger: CCCAAACGAGGAAGACCACAAGTTAGATTGCCAGTT...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCAAGGTTATAAGATTGGATTTCTGCATCTTCTTTaGGATTCACTCTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: DLIPAASTGTALQGYKIGFLHLL*DSLSWR
Trigger: TCTCCAAGAGAGTGAATCCAAAAGAAGATGCAGAAA...TCCAATCTTATAACCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTCCAGCTTTTGCTTCACTTGTGTTACGAGGGTTGTATTCAAAGCAGTTCCTTGTGTTACGAGGGTaGTATTCAAAGCAGTTCGAA +
Preference number: 5 (lower is better)
Translates to: LVPAFASLVLRGLYSKQFLVLRG*YSKQFE
Trigger: TTCGAACTGCTTTGAATACAACCCTCGTAACACAAG...GAACTGCTTTGAATACAACCCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR CAA 90 bp CCTAGTTCCAGCTTTTGCTTCACTTGTGTTACGAGGGTTGTATTCAAAGCAGTTCAGCTTTTGCTTCACTaGTGTTACGAGGGTTGTATT +
Preference number: 5 (lower is better)
Translates to: PSSSFCFTCVTRVVFKAVQLLLH*CYEGCI
Trigger: AATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG...AACTGCTTTGAATACAACCCTCGTAACACAAGTGAAGCAAAAGCTGGAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555331.1
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACGGTGGTGTGCTAACTaGGTCCACATTACTGGGTGT +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIRWCAN*VHITGC
Trigger: ACACCCAGTAATGTGGACCAAGTTAGCACACCACCG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS TCA 90 bp CATTTGCTGATGTTACATCAGCACCTGAAGCTAAGATGTGCAGTCTaGGGATTTCTGAAAGAGTGCAGCTATCAAGATCCAAACTTTTCA +
Preference number: 5 (lower is better)
Translates to: HLLMLHQHLKLRCAV*GFLKECSYQDPNFS
Trigger: TGAAAAGTTTGGATCTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGGTGCTGATGTAACATCAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
CDS GCA 90 bp TACTTTGCATTTGCTGATGTTACATCAGCACCTGAAGCTAAGATGTaGAGTCTGAGGATTTCTGAAAGAGTGCAGCTATCAAGATCCAAA +
Preference number: 5 (lower is better)
Translates to: YFAFADVTSAPEAKM*SLRISERVQLSRSK
Trigger: TTTGGATCTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGGTGCTGATGTAACATCAGCAAATGCAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTAATGACTCCATCTaGTGGTTCACAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFNDSI*WFTVLL
Trigger: AAGCAACACTGTGAACCACAAGATGGAGTCATTAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTCACTAGACTGGGATaGCTCAAACGAAGCTCCATA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFTRLG*LKRSSI
Trigger: TATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTTGCTCTGTGTCTTaGCTCTCAATGCTAGTATCA +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFCSVS*LSMLVS
Trigger: TGATACTAGCATTGAGAGCAAAGACACAGAGCAAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAATGGTCACGTGGACCTaGGTCAATGTTGGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIMVTWT*VNVGGR
Trigger: TCTACCTCCAACATTGACCAAGGTCCACGTGACCAT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGCTTATGCACTGGTTTaGGCAGCTGCACAGAATGGT +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQAYALV*AAAQNG
Trigger: ACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATGTCGATCTGTAACCTaGATGGCTCCTAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLICRSVT*MAPNVP
Trigger: AGGAACATTAGGAGCCATCAAGGTTACAGATCGACA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTCTTTCGACATATCTaGCAACGCGCATTCAGTATA +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFFRHI*QRAFSI
Trigger: TATACTGAATGCGCGTTGCAAGATATGTCGAAAGAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGCTCTGCTGACTCCTaGAAGGGTATCTTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICSADS*KGIFQV
Trigger: AACCTGGAAGATACCCTTCAAGGAGTCAGCAGAGCA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGCTCTGCTGACTCCTaGAAGGGTATCTTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCSADS*KGIFQV
Trigger: AACCTGGAAGATACCCTTCAAGGAGTCAGCAGAGCA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTAGTTAATAAACTTGGACTTAATACCTGCAGCCAGCACTGGTACAGCACTTCATTTCTGCATCTTCTTTaGGATTCACTCTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LVNKLGLNTCSQHWYSTSFLHLL*DSLSWR
Trigger: TCTCCAAGAGAGTGAATCCAAAAGAAGATGCAGAAA...TGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTATTAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp CTGGCTACTAAAATCAGATGGAAAACTAGTGACTGTCTGAGTCAGGACTGTCTAGATCAACTTCATTATTaGGCTGTTAACAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: LATKIRWKTSDCLSQDCLDQLHY*AVNRGN
Trigger: GTTTCCCCTGTTAACAGCCAAATAATGAAGTTGATC...TAGACAGTCCTGACTCAGACAGTCACTAGTTTTCCATCTGATTTTAGTAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553573.1
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACAGACAGTGCAGATTTaGTGGGGTCTGCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIQTVQI*WGLHLH
Trigger: ATGAAGATGCAGACCCCACAAAATCTGCACTGTCTG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACCCGGAACTCCTGCTTaGCCTGTCGTAATATATCAA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIPGTPA*PVVIYQ
Trigger: TTGATATATTACGACAGGCAAAGCAGGAGTTCCGGG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTCCCCGACTATATGTaGGTTTGCTATCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFPDYM*VCYQAE
Trigger: CTCAGCCTGATAGCAAACCAACATATAGTCGGGGAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTCCCCGACTATATGTaGGTTTGCTATCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFPDYM*VCYQAE
Trigger: CTCAGCCTGATAGCAAACCAACATATAGTCGGGGAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAATGCCCTGCTCTATTaGAAAGAGTGCCATTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQNALLY*KECHCQ
Trigger: CTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGAGTCTTCTAGAACGTaGCTTTGGTCGACATTCTGG +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIESSRT*LWSTFW
Trigger: CCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTTGTGTTACGAGGGTaGTATTCAAAGCAGTTCGAA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILVLRG*YSKQFE
Trigger: TTCGAACTGCTTTGAATACAACCCTCGTAACACAAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACAGCTTTTGCTTCACTaGTGTTACGAGGGTTGTATT +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIQLLLH*CYEGCI
Trigger: AATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 90 bp AGCTCCATACAAGCATCATCTGTAGCATCAAATCCTCCTCGTTTTTaGTATCTATACTTTGCATTTGCTGATGTTACATCAGCACCTGAA +
Preference number: 5 (lower is better)
Translates to: SSIQASSVASNPPRF*YLYFAFADVTSAPE
Trigger: TTCAGGTGCTGATGTAACATCAGCAAATGCAAAGTATAGATATCAAAAACGAGGAGGATTTGATGCTACAGATGATGCTTGTATGGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
ENST00000556314.2
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGCAACCTTGCACCATaGTTCCTAATGACTTCCACA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICNLAP*FLMTST
Trigger: TGTGGAAGTCATTAGGAACAATGGTGCAAGGTTGCA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGCAACCTTGCACCATaGTTCCTAATGACTTCCACA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCNLAP*FLMTST
Trigger: TGTGGAAGTCATTAGGAACAATGGTGCAAGGTTGCA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTTAATGACTCCATCTaGTGGTTCACAGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFNDSI*WFTVLL
Trigger: AAGCAACACTGTGAACCACAAGATGGAGTCATTAAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTAATATGTATTCGTTaGGGAGGTCTCCCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLICIR*GGLPLR
Trigger: ACGAAGAGGGAGACCTCCCAAACGAATACATATTAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTTCTTCTTCAGCTATaGCCTGGAAGATTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLLLQL*PGRLQS
Trigger: TGACTGCAATCTTCCAGGCAATAGCTGAAGAAGAAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTCACTAGACTGGGATaGCTCAAACGAAGCTCCATA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFTRLG*LKRSSI
Trigger: TATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTTTGCTCTGTGTCTTaGCTCTCAATGCTAGTATCA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFCSVS*LSMLVS
Trigger: TGATACTAGCATTGAGAGCAAAGACACAGAGCAAAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAAAAAGCACCACCGATTaGGCTTATGCACTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQKSTTD*AYALVL
Trigger: CAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTT...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAAGATGGATCATATGCATaGGAAGATCTTCCCCGACTA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQDGSYA*EDLPRL
Trigger: TAGTCGGGGAAGATCTTCCAATGCATATGATCCATC...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATGTCGATCTGTAACCTaGATGGCTCCTAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQCRSVT*MAPNVP
Trigger: AGGAACATTAGGAGCCATCAAGGTTACAGATCGACA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATGTCGATCTGTAACCTaGATGGCTCCTAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFICRSVT*MAPNVP
Trigger: AGGAACATTAGGAGCCATCAAGGTTACAGATCGACA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATACTGATTGTGGTGTACTaGCATTTGTTGATACAGTAC +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLILIVVY*HLLIQY
Trigger: GTACTGTATCAACAAATGCAAGTACACCACAATCAG...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp TCTAAACTGTGCTATAGCGGAAGACTCATCCATGTAGATAACTCTCCCTTAATATTCTTTCGACATATCTaGCAACGCGCATTCAGTATA +
Preference number: 5 (lower is better)
Translates to: SKLCYSGRLIHVDNSPLIFFRHI*QRAFSI
Trigger: TATACTGAATGCGCGTTGCAAGATATGTCGAAAGAA...TATTAAGGGAGAGTTATCTACATGGATGAGTCTTCCGCTATAGCACAGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAGCCTCTGTTAAATCTTaGGTGTCAGCATCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIASVKS*VSASVS
Trigger: ACTAACTGATGCTGACACCAAAGATTTAACAGAGGC...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACTGAAGTTAGGGAAGTaGGGACTATTTTCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILKLGK*GLFSGV
Trigger: TACACCAGAAAATAGTCCCAACTTCCCTAACTTCAG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACTGAAGTTAGGGAAGTaGGGACTATTTTCTGGTGTA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQLKLGK*GLFSGV
Trigger: TACACCAGAAAATAGTCCCAACTTCCCTAACTTCAG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAACAGCTTTTGCTTCACTaGTGTTACGAGGGTTGTATT +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQQLLLH*CYEGCI
Trigger: AATACAACCCTCGTAACACAAGTGAAGCAAAAGCTG...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000555331.1
CDS CCA 90 bp ACATATGCAAAGATATCATCACAAATTTCATGTAAGCGCGAACGATaGGTAAGGCTGGTCAAGTATAAAACTGGAATAATTAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TYAKISSQISCKRER*VRLVKYKTGIISGS
Trigger: AGAACCACTAATTATTCCAGTTTTATACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553853.1
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATTTTCTCCGGCTGATTaGTGTTGCTTTAACAATAGC +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIFSPAD*CCFNNS
Trigger: GCTATTGTTAAAGCAACACAAATCAGCCGGAGAAAA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATATCTCTTGTTACACAGTaGATCTGTTCTTGCCTTGTA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFISLVTQ*ICSCLV
Trigger: TACAAGGCAAGAACAGATCAACTGTGTAACAAGAGA...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATCTCTTGTTACACAGTaGATCTGTTCTTGCCTTGTA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQSLVTQ*ICSCLV
Trigger: TACAAGGCAAGAACAGATCAACTGTGTAACAAGAGA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATACTGATTGTGGTGTACTaGCATTTGTTGATACAGTAC +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFILIVVY*HLLIQY
Trigger: GTACTGTATCAACAAATGCAAGTACACCACAATCAG...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GTGCTTAATATTAAAATTGAGAATATAGTGCAGGCCACACTTTCATGTGGTCAATTCTTTCGACATATCTaGCAACGCGCATTCAGTATA +
Preference number: 5 (lower is better)
Translates to: VLNIKIENIVQATLSCGQFFRHI*QRAFSI
Trigger: TATACTGAATGCGCGTTGCAAGATATGTCGAAAGAA...TTGACCACATGAAAGTGTGGCCTGCACTATATTCTCAATTTTAATATTAAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS-3UTR CAA 90 bp GAATATAGTGCAGGCCACACTTTCATGTGGTCAATCAATTGTTATTGCTTTATAAAGCATCCTCCATGTTaGAGATTATCAGCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: EYSAGHTFMWSINCYCFIKHPPC*RLSAKR
Trigger: TCTTTTGGCTGATAATCTCAAACATGGAGGATGCTT...TATAAAGCAATAACAATTGATTGACCACATGAAAGTGTGGCCTGCACTATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS GCA 72 bp CGCGGCCGCTACCGGAGCCGAGTTCGTTCCTGCCGCTaGCCGGGTGTCGAGCGAGCGGAGCCGCCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RGRYRSRVRSCR*PGVERAEPPPP
Trigger: GGGCGGCGGCGGCTCCGCTCGCTCGACACCCGGGCAGCGGCAGGAACGAACTCGGCTCCGGTAGCGGCCGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS GCA 72 bp ACGCGCCGCGGCCGCTACCGGAGCCGAGTTCGTTCCTaGCGCTGCCCGGGTGTCGAGCGAGCGGAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: TRRGRYRSRVRS*RCPGVERAEPP
Trigger: CGGCGGCTCCGCTCGCTCGACACCCGGGCAGCGGCAGGAACGAACTCGGCTCCGGTAGCGGCCGCGGCGCGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS CAA 90 bp GGCTGCCGCTTCTCCCGCTGCCACTGCCCGACTCCGCGCGGGGAATaGCGTCCCACCGCCACTTCCCCGCCTCTCGGAGCTCCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GCRFSRCHCPTPRGE*RPTATSPPLGAPGK
Trigger: CTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGGCGGTGGGACGCAATTCCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS TCA 72 bp GTCCGCGCGCTGGGAGAAGCTCGGCTGCCTTTTGTGTaGCTGACGCGCCGCGGCCGCTACCGGAGCCGAGTT +
Preference number: 6 (lower is better)
Translates to: VRALGEARLPFV*LTRRGRYRSRV
Trigger: AACTCGGCTCCGGTAGCGGCCGCGGCGCGTCAGTCACACAAAAGGCAGCCGAGCTTCTCCCAGCGCGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS TCA 72 bp GCGCGCTGGGAGAAGCTCGGCTGCCTTTTGTGTGACTaGCGCGCCGCGGCCGCTACCGGAGCCGAGTTCGTT +
Preference number: 6 (lower is better)
Translates to: ARWEKLGCLLCD*RAAAATGAEFV
Trigger: AACGAACTCGGCTCCGGTAGCGGCCGCGGCGCGTCAGTCACACAAAAGGCAGCCGAGCTTCTCCCAGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382422.6
CDS GCA 72 bp CCCGCGCCGGCCCCGCTTCCCTGCGATCACGCCGACTaGCACTTGTCCACCTTCTCCACTACAAAGGCAACG +
Preference number: 6 (lower is better)
Translates to: PAPAPLPCDHAD*HLSTFSTTKAT
Trigger: CGTTGCCTTTGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCAGGGAAGCGGGGCCGGCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS CAA 72 bp CCGGCCCCGCTTCCCTGCGATCACGCCGACTGCCACTaGTCCACCTTCTCCACTACAAAGGCAACGAGGGGA +
Preference number: 6 (lower is better)
Translates to: PAPLPCDHADCH*STFSTTKATRG
Trigger: TCCCCTCGTTGCCTTTGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCAGGGAAGCGGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358716.8
ENST00000360310.6
CDS TCA 72 bp CCACTTCCCCGCCTCTCGGAGCTCCTGGGAAGTTTCTaGTCTACTTTCGGCTCTGAAGGAGGAAGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: PLPRLSELLGSF*STFGSEGGRAV
Trigger: AACAGCTCTTCCTCCTTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS GCA 72 bp CACCACCGATTTGGCTTATGCACTGGTTTTGGCAGCTaGACAGAATGGTCACGTGGACCTTGGTCAATGTTG +
Preference number: 6 (lower is better)
Translates to: HHRFGLCTGFGS*TEWSRGPWSML
Trigger: CAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp GTAAAAGCACCACCGATTTGGCTTATGCACTGGTTTTaGCAGCTGCACAGAATGGTCACGTGGACCTTGGTC +
Preference number: 6 (lower is better)
Translates to: VKAPPIWLMHWF*QLHRMVTWTLV
Trigger: GACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp GGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTTaGTCAATGTTGGAGGTAGATTCAGACATCAAAGGC +
Preference number: 6 (lower is better)
Translates to: GFGSCTEWSRGP*SMLEVDSDIKG
Trigger: GCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp AGAACTGTAAAAGCACCACCGATTTGGCTTATGCACTaGTTTTGGCAGCTGCACAGAATGGTCACGTGGACC +
Preference number: 6 (lower is better)
Translates to: RTVKAPPIWLMH*FWQLHRMVTWT
Trigger: GGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp TGTAAAAGCACCACCGATTTGGCTTATGCACTGGTTTaGGCAGCTGCACAGAATGGTCACGTGGACCTTGGT +
Preference number: 6 (lower is better)
Translates to: CKSTTDLAYALV*AAAQNGHVDLG
Trigger: ACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp GTGGCCATGCAGCTGCCAAAGATGCAACTGCAGACAGTGCAGATTTaGTGGGGTCTGCATCTTCATCCAAAGCCTCTGTTAAATCTTTGG +
Preference number: 6 (lower is better)
Translates to: VAMQLPKMQLQTVQI*WGLHLHPKPLLNLW
Trigger: CCAAAGATTTAACAGAGGCTTTGGATGAAGATGCAGACCCCACAAAATCTGCACTGTCTGCAGTTGCATCTTTGGCAGCTGCATGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp CTTATGCACTGGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTaGGTCAATGTTGGAGGTAGATTCAGACATCAAAGGCTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LMHWFWQLHRMVTWT*VNVGGRFRHQRLSS
Trigger: ACTGGAGAGCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp CACAAGAACTGTAAAAGCACCACCGATTTGGCTTATGCACTGGTTTaGGCAGCTGCACAGAATGGTCACGTGGACCTTGGTCAATGTTGG +
Preference number: 6 (lower is better)
Translates to: HKNCKSTTDLAYALV*AAAQNGHVDLGQCW
Trigger: CCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 72 bp TTTATTGGCTACTCGATGACTTTTACAGCCTGTCACTaGTACAGGAAGAGACAGCGGAGAGCCTGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: FIGYSMTFTACH*YRKRQRRAWEN
Trigger: GTTCTCCCAGGCTCTCCGCTGTCTCTTCCTGTATCAGTGACAGGCTGTAAAAGTCATCGAGTAGCCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS GCA 72 bp TGGCATCAAGTGGAGCTTTCAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGAGTGCCATTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: WHQVELSENAAQ*PALFERVPLPD
Trigger: ATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp ATGCACTGGTTTTGGCAGCTGCACAGAATGGTCACGTaGACCTTGGTCAATGTTGGAGGTAGATTCAGACAT +
Preference number: 6 (lower is better)
Translates to: MHWFWQLHRMVT*TLVNVGGRFRH
Trigger: ATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp TTTGGCTTATGCACTGGTTTTGGCAGCTGCACAGAATaGTCACGTGGACCTTGGTCAATGTTGGAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: FGLCTGFGSCTE*SRGPWSMLEVD
Trigger: ATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp CAGCTGCCAAAGATGCAACTGCAGACAGTGCAGATTTaGTGGGGTCTGCATCTTCATCCAAAGCCTCTGTTA +
Preference number: 6 (lower is better)
Translates to: QLPKMQLQTVQI*WGLHLHPKPLL
Trigger: TAACAGAGGCTTTGGATGAAGATGCAGACCCCACAAAATCTGCACTGTCTGCAGTTGCATCTTTGGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
CDS CAA 72 bp AGCTGCACAGAATGGTCACGTGGACCTTGGTCAATGTaGGAGGTAGATTCAGACATCAAAGGCTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: SCTEWSRGPWSM*EVDSDIKGSPV
Trigger: AACTGGAGAGCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp TGGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTaGGTCAATGTTGGAGGTAGATTCAGACATCAAAGG +
Preference number: 6 (lower is better)
Translates to: WFWQLHRMVTWT*VNVGGRFRHQR
Trigger: CCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp GGATGGTCTCTGTCTAGAGGAGAGTCTTCTAGAACGTaGCTTTGGTCGACATTCTGGACAAAACCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: GWSLSRGESSRT*LWSTFWTKPVS
Trigger: GGAGACTGGTTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTCTCCTCTAGACAGAGACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp GGTTTTGGCAGCTGCACAGAATGGTCACGTGGACCTTGGTCAATGTaGGAGGTAGATTCAGACATCAAAGGCTCTCCAGTTTTAGTGGAT +
Preference number: 6 (lower is better)
Translates to: GFGSCTEWSRGPWSM*EVDSDIKGSPVLVD
Trigger: ATCCACTAAAACTGGAGAGCCTTTGATGTCTGAATCTACCTCCAACATTGACCAAGGTCCACGTGACCATTCTGTGCAGCTGCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp ACTTTCCAAGGATGGTCTCTGTCTAGAGGAGAGTCTTCTAGAACGTaGCTTTGGTCGACATTCTGGACAAAACCAGTCTCCTTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: TFQGWSLSRGESSRT*LWSTFWTKPVSFRH
Trigger: GTGCCTGAAGGAGACTGGTTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTCTCCTCTAGACAGAGACCATCCTTGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp TCTGCGTTTTCTACGAGGACTAAGCAATTCCACAAATACATCTGCTaGCAGTGGGCCATGACTGTGGCGAGTAGAACGACTGGCAATTCT +
Preference number: 6 (lower is better)
Translates to: SAFSTRTKQFHKYIC*QWAMTVASRTTGNS
Trigger: AGAATTGCCAGTCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAATTGCTTAGTCCTCGTAGAAAACGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp TCAGAAAACGCCGCTCAATGCCCTGCTCTATTTGAAAGAGTGCCATaGCCAGATAATGAACCACACTGCTCACTGATTGTGGTGTACTTG +
Preference number: 6 (lower is better)
Translates to: SENAAQCPALFERVP*PDNEPHCSLIVVYL
Trigger: CAAGTACACCACAATCAGTGAGCAGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000554391.1
ENST00000554865.1
CDS GCA 72 bp GATGGTCTCTGTCTAGAGGAGAGTCTTCTAGAACGTTaGTTTGGTCGACATTCTGGACAAAACCAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: DGLCLEESLLER*FGRHSGQNQSP
Trigger: AGGAGACTGGTTTTGTCCAGAATGTCGACCAAAGCAACGTTCTAGAAGACTCTCCTCTAGACAGAGACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS GCA 72 bp ACTTACCAAGTGGAGCTTTCAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGAGTGCCATTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: TYQVELSENAAQ*PALFERVPLPD
Trigger: ATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554391.1
CDS CAA 72 bp AAGAAACAGTTGTTTTGGGTGTGCTCTGCTGACTCCTaGAAGGGTATCTTCCAGGTTCTTGTTGTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: KKQLFWVCSADS*KGIFQVLVVGH
Trigger: GTGGCCAACAACAAGAACCTGGAAGATACCCTTCAAGGAGTCAGCAGAGCACACCCAAAACAACTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 72 bp AGCAATTCCACAAATACATCTGCTTGCAGTGGGCCATaGCTGTGGCGAGTAGAACGACTGGCAATTCTTAAA +
Preference number: 6 (lower is better)
Translates to: SNSTNTSACSGP*LWRVERLAILK
Trigger: TTTAAGAATTGCCAGTCGTTCTACTCGCCACAGTCATGGCCCACTGCAAGCAGATGTATTTGTGGAATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS GCA 72 bp TTTTACCAAGTGGAGCTTTCAGAAAACGCCGCTCAATaGCCTGCTCTATTTGAAAGAGTGCCATTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: FYQVELSENAAQ*PALFERVPLPD
Trigger: ATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554865.1
CDS CAA 72 bp CTAGCTGTTCACAAGAACTGTAAAAGCACCACCGATTaGGCTTATGCACTGGTTTTGGCAGCTGCACAGAAT +
Preference number: 6 (lower is better)
Translates to: LAVHKNCKSTTD*AYALVLAAAQN
Trigger: ATTCTGTGCAGCTGCCAAAACCAGTGCATAAGCCAAATCGGTGGTGCTTTTACAGTTCTTGTGAACAGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp AGCTTTCAGAAAACGCCGCTCAATGCCCTGCTCTATTaGAAAGAGTGCCATTGCCAGATAATGAACCACACT +
Preference number: 6 (lower is better)
Translates to: SFQKTPLNALLY*KECHCQIMNHT
Trigger: AGTGTGGTTCATTATCTGGCAATGGCACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000554391.1
ENST00000554865.1
CDS TCA 72 bp CTCAGCCTTAGTTCAAGTTGCTTTTCTGCACACATCTaGGATGGATCATATGCATTGGAAGATCTTCCCCGA +
Preference number: 6 (lower is better)
Translates to: LSLSSSCFSAHI*DGSYALEDLPR
Trigger: TCGGGGAAGATCTTCCAATGCATATGATCCATCTCAGATGTGTGCAGAAAAGCAACTTGAACTAAGGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CCA 72 bp CATACACTGAGGTGCTTGACAGTTTCTTCACTAGACTaGGATTGCTCAAACGAAGCTCCATACAAGCATCAT +
Preference number: 6 (lower is better)
Translates to: HTLRCLTVSSLD*DCSNEAPYKHH
Trigger: ATGATGCTTGTATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGAAGAAACTGTCAAGCACCTCAGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
ENST00000556314.2
CDS TCA 72 bp ATGTTACATCAGCACCTGAAGCTAAGATGTGCAGTCTaGGGATTTCTGAAAGAGTGCAGCTATCAAGATCCA +
Preference number: 6 (lower is better)
Translates to: MLHQHLKLRCAV*GFLKECSYQDP
Trigger: TGGATCTTGATAGCTGCACTCTTTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGGTGCTGATGTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
CDS GCA 72 bp TTTGCTGATGTTACATCAGCACCTGAAGCTAAGATGTaGAGTCTGAGGATTTCTGAAAGAGTGCAGCTATCA +
Preference number: 6 (lower is better)
Translates to: FADVTSAPEAKM*SLRISERVQLS
Trigger: TGATAGCTGCACTCTTTCAGAAATCCTCAGACTGCACATCTTAGCTTCAGGTGCTGATGTAACATCAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
CDS GCA 72 bp TTCAAACTGCAGCCTTTGGTGTCAGCATCAGTTAGTTaGTCTTTGGCTACTTCCTCTTCTTCTTCAGCTATT +
Preference number: 6 (lower is better)
Translates to: FKLQPLVSASVS*SLATSSSSSAI
Trigger: AATAGCTGAAGAAGAAGAGGAAGTAGCCAAAGAGCAACTAACTGATGCTGACACCAAAGGCTGCAGTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358716.8
CDS CCA 72 bp GCTTTTCTGCACACATCTGAGATGGATCATATGCATTaGAAGATCTTCCCCGACTATATGTTGGTTTGCTAT +
Preference number: 6 (lower is better)
Translates to: AFLHTSEMDHMH*KIFPDYMLVCY
Trigger: ATAGCAAACCAACATATAGTCGGGGAAGATCTTCCAATGCATATGATCCATCTCAGATGTGTGCAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp TTCATCTTGTTCTACCTCATACTCTTCCTCCTCACTTaGACCTTCTTCTTCATCGCCATCAACTTCATCATC +
Preference number: 6 (lower is better)
Translates to: FILFYLILFLLT*TFFFIAINFII
Trigger: GATGATGAAGTTGATGGCGATGAAGAAGAAGGTCAAAGTGAGGAGGAAGAGTATGAGGTAGAACAAGATGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp AAATCATACACTGAGGTGCTTGACAGTTTCTTCACTAGACTGGGATaGCTCAAACGAAGCTCCATACAAGCATCATCTGTAGCATCAAAT +
Preference number: 6 (lower is better)
Translates to: KSYTEVLDSFFTRLG*LKRSSIQASSVASN
Trigger: ATTTGATGCTACAGATGATGCTTGTATGGAGCTTCGTTTGAGCAATCCCAGTCTAGTGAAGAAACTGTCAAGCACCTCAGTGTATGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
ENST00000556314.2
CDS TCA 72 bp AGAAATTTCAGTATTACCCCTTCTGCCTCTTTTATGTaGTCCTGGGTCATCTTCATCTTCAGTGACCATATC +
Preference number: 6 (lower is better)
Translates to: RNFSITPSASFM*SWVIFIFSDHI
Trigger: GATATGGTCACTGAAGATGAAGATGACCCAGGATCACATAAAAGAGGCAGAAGGGGTAATACTGAAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556314.2
CDS CCA 72 bp AATGACTCTGAAGTTAGGGAAGTTGGGACTATTTTCTaGTGTATTATTAGCACTTTTCCTGCCTCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: NDSEVREVGTIF*CIISTFPASAF
Trigger: AAACGCAGAGGCAGGAAAAGTGCTAATAATACACCAGAAAATAGTCCCAACTTCCCTAACTTCAGAGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000557739.1
CDS CAA 72 bp GATCATATGCATTGGAAGATCTTCCCCGACTATATGTaGGTTTGCTATCAGGCTGAGGTTTGTCTGAAAAAT +
Preference number: 6 (lower is better)
Translates to: DHMHWKIFPDYM*VCYQAEVCLKN
Trigger: ATTTTTCAGACAAACCTCAGCCTGATAGCAAACCAACATATAGTCGGGGAAGATCTTCCAATGCATATGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp TCTGAGATGGATCATATGCATTGGAAGATCTTCCCCGACTATATGTaGGTTTGCTATCAGGCTGAGGTTTGTCTGAAAAATGAAATTTCT +
Preference number: 6 (lower is better)
Translates to: SEMDHMHWKIFPDYM*VCYQAEVCLKNEIS
Trigger: AGAAATTTCATTTTTCAGACAAACCTCAGCCTGATAGCAAACCAACATATAGTCGGGGAAGATCTTCCAATGCATATGATCCATCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS GCA 72 bp ATGCATTGGAAGATCTTCCCCGACTATATGTTGGTTTaGTATCAGGCTGAGGTTTGTCTGAAAAATGAAATT +
Preference number: 6 (lower is better)
Translates to: MHWKIFPDYMLV*YQAEVCLKNEI
Trigger: AATTTCATTTTTCAGACAAACCTCAGCCTGATAGCAAACCAACATATAGTCGGGGAAGATCTTCCAATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp TCCTCATCAGCAGTAAGAGGCTCTCTTGTTACACAGTaGATCTGTTCTTGCCTTGTAAATTCTTTAAATCCA +
Preference number: 6 (lower is better)
Translates to: SSSAVRGSLVTQ*ICSCLVNSLNP
Trigger: TGGATTTAAAGAATTTACAAGGCAAGAACAGATCAACTGTGTAACAAGAGAGCCTCTTACTGCTGATGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 90 bp AATGCTTCTTCCTCATCAGCAGTAAGAGGCTCTCTTGTTACACAGTaGATCTGTTCTTGCCTTGTAAATTCTTTAAATCCATTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: NASSSSAVRGSLVTQ*ICSCLVNSLNPFCP
Trigger: AGGACAAAATGGATTTAAAGAATTTACAAGGCAAGAACAGATCAACTGTGTAACAAGAGAGCCTCTTACTGCTGATGAGGAAGAAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS TCA 72 bp AATACTTCTAGGGTTACTCCATCAGGAAACTCATCTTaGAGATCAAAAAGTTCCCCAAATGCATTAAGGAAC +
Preference number: 6 (lower is better)
Translates to: NTSRVTPSGNSS*RSKSSPNALRN
Trigger: GTTCCTTAATGCATTTGGGGAACTTTTTGATCTTCAAGATGAGTTTCCTGATGGAGTAACCCTAGAAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
CDS CAA 72 bp CAAATCCTCCTCGTTTTTGATATCTATACTTTGCATTaGCTGATGTTACATCAGCACCTGAAGCTAAGATGT +
Preference number: 6 (lower is better)
Translates to: QILLVFDIYTLH*LMLHQHLKLRC
Trigger: ACATCTTAGCTTCAGGTGCTGATGTAACATCAGCAAATGCAAAGTATAGATATCAAAAACGAGGAGGATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553385.1
ENST00000555273.1
ENST00000556314.2
CDS CAA 90 bp TTGTTCCTAATGACTTCCACAGTTTCTTCGACAAAATATCGATCCTaGACATATGCAAAGATATCATCACAAATTTCATGTAAGCGCGAA +
Preference number: 6 (lower is better)
Translates to: LFLMTSTVSSTKYRS*TYAKISSQISCKRE
Trigger: TTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATATGTCAAGGATCGATATTTTGTCGAAGAAACTGTGGAAGTCATTAGGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553853.1
CDS CAA 90 bp TTTTTCTGCATCTTCTTTTGGATTCACTCTCTTGGAGAGAAAGTTTaGAAGCAATATTTACAGATCTTGACTGTTCACTTGACTTTGTGG +
Preference number: 6 (lower is better)
Translates to: FFCIFFWIHSLGEKV*KQYLQILTVHLTLW
Trigger: CCACAAAGTCAAGTGAACAGTCAAGATCTGTAAATATTGCTTCAAAACTTTCTCTCCAAGAGAGTGAATCCAAAAGAAGATGCAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000557739.1
CDS CCA 72 bp AAGATATCATCACAAATTTCATGTAAGCGCGAACGATaGGTAAGGCTGGTCAAGTATAAAACTGGAATAATT +
Preference number: 6 (lower is better)
Translates to: KISSQISCKRER*VRLVKYKTGII
Trigger: AATTATTCCAGTTTTATACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358716.8
ENST00000360310.6
ENST00000382422.6
ENST00000553853.1