RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BATF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000123685

Ensembl transcript IDs: ENST00000243440.2, ENST00000471382.5, ENST00000478275.1

Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAATGGCTCTGCATAACAGCAGAACCTACTAGCTGCCAGGGTGGATaGGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAA +
Preference number: 1 (lower is better)
Translates to: KWLCITAEPTSCQGG*EVTPEGGLHAGSAQ
Trigger: TTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATCCACCCTGGCAGCTAGTAGGTTCTGCTGTTATGCAGAGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR CCA 90 bp GATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGGGCTGAGCCCACCAAGGCTCCTTGCTaGGCAGAGGAGTGTCCCCGG +
Preference number: 2 (lower is better)
Translates to: DLHKGSVSLAPVGCRAEPTKAPC*AEECPR
Trigger: CCGGGGACACTCCTCTGCCCAGCAAGGAGCCTTGGT...GGGCTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR CCA 90 bp GATGAGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGGGAACACAGCTGGCTaGTCCTGGAGCTCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: DEKSLLRVASMLDLHKGSGNTAG*SWSSQE
Trigger: CTCCTGGGAGCTCCAGGACCAGCCAGCTGTGTTCCC...AGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR GCA 90 bp GTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGAATGACCAAGGCTCCTTaGTGGGCAGAGGAGTGTCCC +
Preference number: 2 (lower is better)
Translates to: VASMLDLHKGSVSLAPVGMTKAP*WAEECP
Trigger: GGGACACTCCTCTGCCCAGCAAGGAGCCTTGGTCAT...TCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR CCA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACATGCAGGGAACACAGCTaGCTGGTCCTGGAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: EKEVYCACKFPELEKGETCREHS*LVLELP
Trigger: TGGGAGCTCCAGGACCAGCCAGCTGTGTTCCCTGCA...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR TCA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACACCCTGTATACAATTGTaGAGGAAAAGCCTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: EKEVYCACKFPELEKGETPCIQL*RKSLPP
Trigger: GGGAGGAAGGCTTTTCCTTCACAATTGTATACAGGG...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR TCA 72 bp GGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGTaGGTTTGGCGCCTGTTGGATGTCGGGCTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: GWPPCWICTRAL*VWRLLDVGLSP
Trigger: TGGGCTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR-3UTR CAA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACAAATGACCAAGGCTCCTaGCTGGGCAGAGGAGTGTCC +
Preference number: 3 (lower is better)
Translates to: EKEVYCACKFPELEKGETNDQGS*LGRGVS
Trigger: GGACACTCCTCTGCCCAGCAAGGAGCCTTGGTCATT...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp AGGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTTCCTCAGGGCTCTGCTaGTGCGGCTGCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RVASMLDLHKGSVSLAPVSSGLC*CGCGCG
Trigger: GCCGCAGCCGCAGCCGCAGCAGCAGAGCCCTGAGGA...AACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp CTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGGGAGCCCTTGCGACATaGCGGGCGCTCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LHAGSAQGLCEFGACWMSGALAT*RALLWP
Trigger: GGGCCAGAGGAGCGCCCGGCATGTCGCAAGGGCTCC...CGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp AGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTTCCTCCGCGGCCGGGAGCCCTTaGGACATGCCGGGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPGHRCPLYTIVKEKPSSAAGSP*DMPGAP
Trigger: AGGAGCGCCCGGCATGTCGCAAGGGCTCCCGGCCGC...GGAGGAAGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GATGAGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTTCCTCTGCAGGACGCTaGCGGCGGCCGGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: DEKSLLRVASMLDLHKGSSSAGR*RRPGAL
Trigger: AAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGA...AGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATCATCCTCAGGGCTCTaGTGCTGCGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VASMLDLHKGSVSLAPVGSSSGL*CCGCGC
Trigger: GCAGCCGCAGCCGCAGCAGCAGAGCCCTGAGGATGA...TCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp GTGGCCTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGAACCAAGGCTCCTTGCTaGGCAGAGGAGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VASMLDLHKGSVSLAPVGTKAPC*AEECPR
Trigger: CCGGGGACACTCCTCTGCCCAGCAAGGAGCCTTGGT...TCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp GATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGGGCTGAGCCCTGCAGGGAACACAGCTaGCTGGTCCTGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DLHKGSVSLAPVGCRAEPCREHS*LVLELP
Trigger: TGGGAGCTCCAGGACCAGCCAGCTGTGTTCCCTGCA...GGGCTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
3UTR CAA 72 bp GCCTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTaGGCGCCTGTTGGATGTCGGGCTGAGCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ASMLDLHKGSVS*APVGCRAEPSL
Trigger: CAGACTGGGCTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR TCA 90 bp TCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGGATGAGAAGTCACTCCTaGGGGTGGCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SMLDLHKGSVSLAPVGCRMRSHS*GWPPCW
Trigger: CCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCAT...CCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GTGGATGAGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAAGGGCGGGCACATCTTCTCGTaGTCCTTCAGTGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VDEKSLLRVASMLDLHKGGHIFS*SFSASV
Trigger: GACAGAGGCACTGAAGGAGCACGAGAAGATGTGCCC...GCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp CTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGATGACCAAGGCTCCTTaGTGGGCAGAGGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LHAGSAQGLCEFGACWMSMTKAP*WAEECP
Trigger: GGGACACTCCTCTGCCCAGCAAGGAGCCTTGGTCAT...CGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp AGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTTCCTCCCGGCCGGGGAGGCACTaGCACAAAGTTCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: RPGHRCPLYTIVKEKPSSRPGRH*HKVHRA
Trigger: TGCCCTATGAACTTTGTGCCAGTGCCTCCCCGGCCG...GGAGGAAGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR TCA 90 bp GATGAGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTTGCACAAGGGCTCTGTaGGTTTGGCGCCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: DEKSLLRVASMLDLHKGSCTRAL*VWRLLD
Trigger: ATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCA...AGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR TCA 90 bp AGGAGGAGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTAGCTGCCAGGGTGGATaGGAAGTCACTCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RRRPGHRCPLYTIVKEKPSCQGG*EVTPEG
Trigger: ACCCTCAGGAGTGACTTCTCATCCACCCTGGCAGCT...AGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp CTCCATGCTGGATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGAGTGCCTCTGTCAGGTaGTTCAGCTCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LHAGSAQGLCEFGACWMSSASVR*FSSSVS
Trigger: GCTGACAGAGGAGCTGAAGCACCTGACAGAGGCACT...CGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATCCAGCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GAGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTTCCTCAGGCCTGGCCACAGGTaGCCCCTGTATACAATTGTG +
Preference number: 4 (lower is better)
Translates to: EAWPQVPPVYNCEGKAFLRPGHR*PLYTIV
Trigger: CACAATTGTATACAGGGGGCACCTGTGGCCAGGCCT...GAGGAAGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp CAGCAGAACCTACTAGCTGCCAGGGTGGATGAGAAGTCACTCCTGAGGGTGGCCAGCTTGTCAGCCTTCTaGGTCTGCTTCTTCCGACTT +
Preference number: 4 (lower is better)
Translates to: QQNLLAARVDEKSLLRVASLSAF*VCFFRL
Trigger: AAGTCGGAAGAAGCAGACCCAGAAGGCTGACAAGCT...GGCCACCCTCAGGAGTGACTTCTCATCCACCCTGGCAGCTAGTAGGTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR TCA 90 bp AGGAGGAGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTCCCTGTATACAATTGTaGAGGAAAAGCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRRPGHRCPLYTIVKEKPPCIQL*RKSLPP
Trigger: GGGAGGAAGGCTTTTCCTTCACAATTGTATACAGGG...AGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACAGGGCTGAGCCCAGTCTaGAGGGAACACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKEVYCACKFPELEKGETGLSPV*REHSWL
Trigger: CAGCCAGCTGTGTTCCCTGCAGACTGGGCTCAGCCC...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp AGGAGGAGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTCTCTCATATTCCTCATaGAGCTTGTCAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRRPGHRCPLYTIVKEKPLSYSS*SLSAFW
Trigger: CCAGAAGGCTGACAAGCTCCATGAGGAATATGAGAG...AGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CCA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACATCTCTCTCCGCAGCATaGTGTTTTCTTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EKEVYCACKFPELEKGETSLSAA*CFLAPG
Trigger: GCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGA...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR GCA 90 bp GAAAAGGAAGTGTATTGTGCCTGTAAATTCCCAGAACTGGAGAAGGGAGAGACAAGCATGGTGTTTTCTTaGTCCAGGCTCTCATATTCC +
Preference number: 4 (lower is better)
Translates to: EKEVYCACKFPELEKGETSMVFS*SRLSYS
Trigger: GGAATATGAGAGCCTGGAGCAAGAAAACACCATGCT...TGTCTCTCCCTTCTCCAGTTCTGGGAATTTACAGGCACAATACACTTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS GCA 90 bp GCTGCGGCTGGTTCCCGGGCGCCGCGACGCTCCTCTGCAGGACGCTaGCGGCGGCCGGGAGCCCTTGCGACATGCCGGGCGCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AAAGSRAPRRSSAGR*RRPGALATCRALLW
Trigger: CCAGAGGAGCGCCCGGCATGTCGCAAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGAGCGTCGCGGCGCCCGGGAACCAGCCGCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS CCA 90 bp TCATCGGGGCAAGCAGCCGGCCACAGGGTCCGGCCGGGGAGGCACTaGCACAAAGTTCATAGGGCAGAGCAGCAGCGGGCACATCTTCTC +
Preference number: 5 (lower is better)
Translates to: SSGQAAGHRVRPGRH*HKVHRAEQQRAHLL
Trigger: GAGAAGATGTGCCCGCTGCTGCTCTGCCCTATGAACTTTGTGCCAGTGCCTCCCCGGCCGGACCCTGTGGCCGGCTGCTTGCCCCGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243440.2
ENST00000471382.5
ENST00000478275.1
CDS-3UTR CAA 90 bp GATCTGCACAAGGGCTCTGTGAGTTTGGCGCCTGTTGGATGTCGGGCTGAGCCCTATTCCTCATGGAGCTaGTCAGCCTTCTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: DLHKGSVSLAPVGCRAEPYSSWS*SAFWVC
Trigger: GCAGACCCAGAAGGCTGACAAGCTCCATGAGGAATA...GGGCTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CAA 90 bp GATGAGAAGTCACTCCTGAGGGTGGCCTCCATGCTGGATCTGCACAAGGGCTCTAATGACCAAGGCTCCTaGCTGGGCAGAGGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: DEKSLLRVASMLDLHKGSNDQGS*LGRGVS
Trigger: GGACACTCCTCTGCCCAGCAAGGAGCCTTGGTCATT...AGAGCCCTTGTGCAGATCCAGCATGGAGGCCACCCTCAGGAGTGACTTCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS-3UTR CAA 90 bp GAGGCCTGGCCACAGGTGCCCCCTGTATACAATTGTGAAGGAAAAGCCTTCCTCAAGGGCTCTGTGAGTTaGGCGCCTGTTGGATGTCGG +
Preference number: 5 (lower is better)
Translates to: EAWPQVPPVYNCEGKAFLKGSVS*APVGCR
Trigger: CCGACATCCAACAGGCGCCAAACTCACAGAGCCCTT...GAGGAAGGCTTTTCCTTCACAATTGTATACAGGGGGCACCTGTGGCCAGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS GCA 90 bp TCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTTaGTCCAGGCTCTCATATTCCTCATGGAGCTTGTCAGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSVSFPISLRSMVFS*SRLSYSSWSLSAFW
Trigger: CCAGAAGGCTGACAAGCTCCATGAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243440.2
ENST00000478275.1
CDS GCA 90 bp TCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTTaGTCCAGGCTCTCATATTCCTGTTCAGTTTCCTCTCCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SSVSFPISLRSMVFS*SRLSYSCSVSSPSG
Trigger: CCCTGATGGAGAGGAAACTGAACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS CCA 90 bp GGTGCTTCAGCTCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATaGTGTTTTCTTGCTCCAGGCTCTCATATTCCTGTTCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GASAPLSASRSLSAA*CFLAPGSHIPVQFP
Trigger: AGGAAACTGAACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGAGCTGAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS CCA 90 bp CAAGAAAGCAGCCTGCATACTGCCCTCGGGGAGCTGACTCTAAACTaGACTCATCACCATGATCACACCTGCCAACCCAGCAGAAACATT +
Preference number: 5 (lower is better)
Translates to: QESSLHTALGELTLN*THHHDHTCQPSRNI
Trigger: AATGTTTCTGCTGGGTTGGCAGGTGTGATCATGGTGATGAGTCCAGTTTAGAGTCAGCTCCCCGAGGGCAGTATGCAGGCTGCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 90 bp CTCCAAATCAACGTTCATAAACCTCTAGCCCACAGGGCGTGTGCCTaGAAGAGCTGTGGTGTCAATGTCGTCCATCTGAGACTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: LQINVHKPLAHRACA*KSCGVNVVHLRLES
Trigger: GCTTTCCAGTCTCAGATGGACGACATTGACACCACAGCTCTTCCAGGCACACGCCCTGTGGGCTAGAGGTTTATGAACGTTGATTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 90 bp TCACTGAGCTTCATCATTTGCTTTGCAGTAGACAGCACCACTAGTTaGTATACCAATGGGCTCACAACAGCCCCTTGCCCAGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: SLSFIICFAVDSTTS*YTNGLTTAPCPGAL
Trigger: GAGTGCTCCTGGGCAAGGGGCTGTTGTGAGCCCATTGGTATAGCAACTAGTGGTGCTGTCTACTGCAAAGCAAATGATGAAGCTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 90 bp GAGAGGTTAAGGACCTTGCTCCAGGTATTACAGCCACTAAGTGGGTaGGTGGGAAGTGGAACTCAGGTCTGTTGGTCTCCAAATCAACGT +
Preference number: 5 (lower is better)
Translates to: ERLRTLLQVLQPLSG*VGSGTQVCWSPNQR
Trigger: ACGTTGATTTGGAGACCAACAGACCTGAGTTCCACTTCCCACTCACCCACTTAGTGGCTGTAATACCTGGAGCAAGGTCCTTAACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 90 bp CTCAGAGAGGTTAAGGACCTTGCTCCAGGTATTACAGCCACTAAGTaGGTGAGTGGGAAGTGGAACTCAGGTCTGTTGGTCTCCAAATCA +
Preference number: 5 (lower is better)
Translates to: LREVKDLAPGITATK*VSGKWNSGLLVSKS
Trigger: TGATTTGGAGACCAACAGACCTGAGTTCCACTTCCCACTCACCCACTTAGTGGCTGTAATACCTGGAGCAAGGTCCTTAACCTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 90 bp CTGCCCTGTCTCATCACTCAGCGTTGTTCACTGAGCTTCATCATTTaGTTTGCAGTAGACAGCACCACTAGTTGCTATACCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: LPCLITQRCSLSFII*FAVDSTTSCYTNGL
Trigger: GAGCCCATTGGTATAGCAACTAGTGGTGCTGTCTACTGCAAAGCAAATGATGAAGCTCAGTGAACAACGCTGAGTGATGAGACAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 90 bp GACCTTGCTCCAGGTATTACAGCCACTAAGTGGGTGAGTGGGAAGTaGAACTCAGGTCTGTTGGTCTCCAAATCAACGTTCATAAACCTC +
Preference number: 5 (lower is better)
Translates to: DLAPGITATKWVSGK*NSGLLVSKSTFINL
Trigger: GAGGTTTATGAACGTTGATTTGGAGACCAACAGACCTGAGTTCCACTTCCCACTCACCCACTTAGTGGCTGTAATACCTGGAGCAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 90 bp TGCTATCTGGAACTTGCTGTTTGCCAGTCCTTATACCACCACACATaGAAGGTACTTTTGATACTGCATGCAAATCATGATTACACTTAC +
Preference number: 5 (lower is better)
Translates to: CYLELAVCQSLYHHT*KVLLILHANHDYTY
Trigger: GTAAGTGTAATCATGATTTGCATGCAGTATCAAAAGTACCTTTCATGTGTGGTGGTATAAGGACTGGCAAACAGCAAGTTCCAGATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 90 bp TTGCTGTTTGCCAGTCCTTATACCACCACACATGAAAGGTACTTTTaGTACTGCATGCAAATCATGATTACACTTACAACTAATTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLFASPYTTTHERYF*YCMQIMITLTTNCS
Trigger: GCTGCAATTAGTTGTAAGTGTAATCATGATTTGCATGCAGTATCAAAAGTACCTTTCATGTGTGGTGGTATAAGGACTGGCAAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 72 bp CTCCTCTGCAGGACGCTGCCGGCGGCCGGGAGCCCTTaGGACATGCCGGGCGCTCCTCTGGCCCGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LLCRTLPAAGSP*DMPGAPLARPA
Trigger: GGCGGGCCGGGCCAGAGGAGCGCCCGGCATGTCGCAAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS GCA 72 bp GGTTCCCGGGCGCCGCGACGCTCCTCTGCAGGACGCTaGCGGCGGCCGGGAGCCCTTGCGACATGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: GSRAPRRSSAGR*RRPGALATCRA
Trigger: CGCCCGGCATGTCGCAAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGAGCGTCGCGGCGCCCGGGAACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS GCA 72 bp GGCTGCGGCTGGTTCCCGGGCGCCGCGACGCTCCTCTaGAGGACGCTGCCGGCGGCCGGGAGCCCTTGCGAC +
Preference number: 6 (lower is better)
Translates to: GCGWFPGAATLL*RTLPAAGSPCD
Trigger: GTCGCAAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGAGCGTCGCGGCGCCCGGGAACCAGCCGCAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS CAA 72 bp GCTCCTCTGCAGGACGCTGCCGGCGGCCGGGAGCCCTaGCGACATGCCGGGCGCTCCTCTGGCCCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: APLQDAAGGREP*RHAGRSSGPAR
Trigger: GCGGGCCGGGCCAGAGGAGCGCCCGGCATGTCGCAAGGGCTCCCGGCCGCCGGCAGCGTCCTGCAGAGGAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243440.2
CDS CCA 72 bp CAAGCAGCCGGCCACAGGGTCCGGCCGGGGAGGCACTaGCACAAAGTTCATAGGGCAGAGCAGCAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: QAAGHRVRPGRH*HKVHRAEQQRA
Trigger: TGCCCGCTGCTGCTCTGCCCTATGAACTTTGTGCCAGTGCCTCCCCGGCCGGACCCTGTGGCCGGCTGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243440.2
ENST00000471382.5
ENST00000478275.1
CDS CCA 72 bp CTCCTTCGGACCTTCCTGTCATCATCCTCAGGGCTCTaGGGAAAAACACTGGGTGGGTGTGATGTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: LLRTFLSSSSGL*GKTLGGCDVVA
Trigger: GGCCACGACATCACACCCACCCAGTGTTTTTCCCCAGAGCCCTGAGGATGATGACAGGAAGGTCCGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 72 bp ACCTCTAGCCCACAGGGCGTGTGCCTGGAAGAGCTGTaGTGTCAATGTCGTCCATCTGAGACTGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: TSSPQGVCLEEL*CQCRPSETGKL
Trigger: CAGCTTTCCAGTCTCAGATGGACGACATTGACACCACAGCTCTTCCAGGCACACGCCCTGTGGGCTAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CAA 90 bp CTCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTaGCTCCAGGCTCTCATATTCCTCATGGAGCTTGTCAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LLCQLPDLSPQHGVF*LQALIFLMELVSLL
Trigger: CAGAAGGCTGACAAGCTCCATGAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243440.2
ENST00000478275.1
CDS CCA 72 bp GCTCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATaGTGTTTTCTTGCTCCAGGCTCTCATATTCCTCAT +
Preference number: 6 (lower is better)
Translates to: APLSASRSLSAA*CFLAPGSHIPH
Trigger: ATGAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243440.2
ENST00000478275.1
CDS CCA 72 bp GCTCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATaGTGTTTTCTTGCTCCAGGCTCTCATATTCCTGTT +
Preference number: 6 (lower is better)
Translates to: APLSASRSLSAA*CFLAPGSHIPV
Trigger: AACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS CCA 72 bp AACGTTCATAAACCTCTAGCCCACAGGGCGTGTGCCTaGAAGAGCTGTGGTGTCAATGTCGTCCATCTGAGA +
Preference number: 6 (lower is better)
Translates to: NVHKPLAHRACA*KSCGVNVVHLR
Trigger: TCTCAGATGGACGACATTGACACCACAGCTCTTCCAGGCACACGCCCTGTGGGCTAGAGGTTTATGAACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CAA 72 bp CAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTaGCTCCAGGCTCTCATATTCCTCATGGAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: QLPDLSPQHGVF*LQALIFLMELV
Trigger: GACAAGCTCCATGAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243440.2
ENST00000478275.1
CDS CAA 90 bp CTCCTCTGTCAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTaGCTCCAGGCTCTCATATTCCTGTTCAGTTTCCTCTCCATCAGG +
Preference number: 6 (lower is better)
Translates to: LLCQLPDLSPQHGVF*LQALIFLFSFLSIR
Trigger: CCTGATGGAGAGGAAACTGAACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTGACAGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS CAA 90 bp TGGCCCCTCGCCTTACCCTTTTCTGCCCTGTCTCATCACTCAGCGTaGTTCACTGAGCTTCATCATTTGCTTTGCAGTAGACAGCACCAC +
Preference number: 6 (lower is better)
Translates to: WPLALPFSALSHHSA*FTELHHLLCSRQHH
Trigger: GTGGTGCTGTCTACTGCAAAGCAAATGATGAAGCTCAGTGAACAACGCTGAGTGATGAGACAGGGCAGAAAAGGGTAAGGCGAGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 72 bp GTTAAGGACCTTGCTCCAGGTATTACAGCCACTAAGTaGGTGAGTGGGAAGTGGAACTCAGGTCTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: VKDLAPGITATK*VSGKWNSGLLV
Trigger: GACCAACAGACCTGAGTTCCACTTCCCACTCACCCACTTAGTGGCTGTAATACCTGGAGCAAGGTCCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CAA 72 bp CAGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTaGCTCCAGGCTCTCATATTCCTGTTCAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: QLPDLSPQHGVF*LQALIFLFSFL
Trigger: GAGGAAACTGAACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS GCA 72 bp AGCTTCCCGATCTCTCTCCGCAGCATGGTGTTTTCTTaGTCCAGGCTCTCATATTCCTGTTCAGTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SFPISLRSMVFS*SRLSYSCSVSS
Trigger: AGAGGAAACTGAACAGGAATATGAGAGCCTGGAGCAAGAAAACACCATGCTGCGGAGAGAGATCGGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471382.5
CDS CCA 72 bp CCAGGTATTACAGCCACTAAGTGGGTGAGTGGGAAGTaGAACTCAGGTCTGTTGGTCTCCAAATCAACGTTC +
Preference number: 6 (lower is better)
Translates to: PGITATKWVSGK*NSGLLVSKSTF
Trigger: GAACGTTGATTTGGAGACCAACAGACCTGAGTTCCACTTCCCACTCACCCACTTAGTGGCTGTAATACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CAA 72 bp TTTTCTTGCTCCAGGCTCTCATATTCCTCATGGAGCTaGTCAGCCTTCTGGGTCTGCTTCTTCCGACTTCTC +
Preference number: 6 (lower is better)
Translates to: FSCSRLSYSSWS*SAFWVCFFRLL
Trigger: GAGAAGTCGGAAGAAGCAGACCCAGAAGGCTGACAAGCTCCATGAGGAATATGAGAGCCTGGAGCAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243440.2
ENST00000478275.1
CDS CAA 72 bp GGGCGGTGGAGAGATCTGCTATCTGGAACTTGCTGTTaGCCAGTCCTTATACCACCACACATGAAAGGTACT +
Preference number: 6 (lower is better)
Translates to: GRWRDLLSGTCC*PVLIPPHMKGT
Trigger: AGTACCTTTCATGTGTGGTGGTATAAGGACTGGCAAACAGCAAGTTCCAGATAGCAGATCTCTCCACCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 72 bp TTCATCATTTGCTTTGCAGTAGACAGCACCACTAGTTaGTATACCAATGGGCTCACAACAGCCCCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: FIICFAVDSTTS*YTNGLTTAPCP
Trigger: TGGGCAAGGGGCTGTTGTGAGCCCATTGGTATAGCAACTAGTGGTGCTGTCTACTGCAAAGCAAATGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 72 bp CTCATCACTCAGCGTTGTTCACTGAGCTTCATCATTTaGTTTGCAGTAGACAGCACCACTAGTTGCTATACC +
Preference number: 6 (lower is better)
Translates to: LITQRCSLSFII*FAVDSTTSCYT
Trigger: GGTATAGCAACTAGTGGTGCTGTCTACTGCAAAGCAAATGATGAAGCTCAGTGAACAACGCTGAGTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 72 bp AACTCTACCAACACACCAAATGATCTTAAACCCCACTaGCAGTGTACTCATTTGAACAATGCTTGGCTGACA +
Preference number: 6 (lower is better)
Translates to: NSTNTPNDLKPH*QCTHLNNAWLT
Trigger: TGTCAGCCAAGCATTGTTCAAATGAGTACACTGTCAGTGGGGTTTAAGATCATTTGGTGTGTTGGTAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 72 bp GAACTTGCTGTTTGCCAGTCCTTATACCACCACACATaGAAGGTACTTTTGATACTGCATGCAAATCATGAT +
Preference number: 6 (lower is better)
Translates to: ELAVCQSLYHHT*KVLLILHANHD
Trigger: ATCATGATTTGCATGCAGTATCAAAAGTACCTTTCATGTGTGGTGGTATAAGGACTGGCAAACAGCAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS TCA 72 bp GCCAGTCCTTATACCACCACACATGAAAGGTACTTTTaGTACTGCATGCAAATCATGATTACACTTACAACT +
Preference number: 6 (lower is better)
Translates to: ASPYTTTHERYF*YCMQIMITLTT
Trigger: AGTTGTAAGTGTAATCATGATTTGCATGCAGTATCAAAAGTACCTTTCATGTGTGGTGGTATAAGGACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS GCA 72 bp TACTGCATGCAAATCATGATTACACTTACAACTAATTaGAGCCACATAACTCTACCAACACACCAAATGATC +
Preference number: 6 (lower is better)
Translates to: YCMQIMITLTTN*SHITLPTHQMI
Trigger: GATCATTTGGTGTGTTGGTAGAGTTATGTGGCTGCAATTAGTTGTAAGTGTAATCATGATTTGCATGCAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CCA 72 bp TTGATAAACAAAACCAGAACATTACAGGGGAACATGTaGTTAGAAGACAGCTCTTTAGCTTTAGAATCACAC +
Preference number: 6 (lower is better)
Translates to: LINKTRTLQGNM*LEDSSLALESH
Trigger: GTGTGATTCTAAAGCTAAAGAGCTGTCTTCTAACCACATGTTCCCCTGTAATGTTCTGGTTTTGTTTATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478275.1
CDS CAA 90 bp GTTAGAAGACAGCTCTTTAGCTTTAGAATCACACAGATCCTAGTTTaGTCTCTTAGTGTCAACATGGTCTTGTGTAAATGGTTTAAATTC +
Preference number: 6 (lower is better)
Translates to: VRRQLFSFRITQILV*SLSVNMVLCKWFKF
Trigger: GAATTTAAACCATTTACACAAGACCATGTTGACACTAAGAGACAAAACTAGGATCTGTGTGATTCTAAAGCTAAAGAGCTGTCTTCTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478275.1