Pregenerated sensors for BASP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176788Ensembl transcript IDs: ENST00000322611.4, ENST00000606445.1, ENST00000616743.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGAAGAAAAGCTATTCAACTCTCAGCGGTGGAGGAGTGCATGTaGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCAGACGC | + |
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Preference number: 1 (lower is better) Translates to: CRRKAIQLSAVEECM*RQFQVQTMYCTFRR Trigger: GCGTCTGAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTTCTTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CCA 90 bp | CTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCAGCGGTaGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACT | + |
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Preference number: 1 (lower is better) Translates to: LPTPIAEEKLFNSQR*RSACGGSFRYKRCT Trigger: AGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CCA 90 bp | AAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGTaGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KYCSHKDLIALAQAL*AESNASLPTPIAEE Trigger: TTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCTTCAGACGCGGATCTTaGAAATCCAGGACTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LGTGPVGRIKRITPNSHCFRRGS*KSRTSW Trigger: CCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAA...GCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CAA 90 bp | CACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATaGCAGAAGAAAAGCTATTCAACTCTCAGCGGTGGAGGAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HRPCGQNQTHHSQLP*QKKSYSTLSGGGVH Trigger: ATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR GCA 90 bp | TGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGGTACAAACGATGTACTaGACTTTCAGACGCGGATCT | + |
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Preference number: 2 (lower is better) Translates to: WHRPCGQNQTHHSQLPLQVQTMY*TFRRGS Trigger: AGATCCGCGTCTGAAAGTGCAGTACATCGTTTGTAC...CTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAGTACAAACGATGTACTaGACTTTCAGACGCGGATCT | + |
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Preference number: 2 (lower is better) Translates to: AQALWAESNASLPTPIAEVQTMY*TFRRGS Trigger: AGATCCGCGTCTGAAAGTGCAGTACATCGTTTGTAC...TTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAATTCAACTCTCAGCGGTaGAGGAGTGCATGTGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: FHFPMSGVLVSVTQNGREFNSQR*RSACGG Trigger: GCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAA...TTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CCA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAATGTGGACAAGCTAAGTaGGCTCTGTCTGAAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NRTTGAPNHGHALTRHEKCGQAK*ALSESW Trigger: CCAGCTTTCAGACAGAGCCCACTTAGCTTGTCCACA...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR GCA 90 bp | TTCCATTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAAAACAGAACTACAGGTaGACCCAACCACGGACATGC | + |
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Preference number: 2 (lower is better) Translates to: FHFPMSGVLVSVTQNGREKQNYR*TQPRTC Trigger: GCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTTT...TTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR TCA 90 bp | TTCCATTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAATGGAGGATTGGCATTaGGATCCATGTGGACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: FHFPMSGVLVSVTQNGREMEDWH*DPCGQA Trigger: AGCTTGTCCACATGGATCTCAATGCCAATCCTCCAT...TTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CCA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCTTCAGACGCGGATCTTaGAAATCCAGGACTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLFRRGS*KSRTSW Trigger: CCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAA...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CCA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAAGCTCTGTCTGAAAGCTaGCATTCATCCACAACATTA | + |
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Preference number: 2 (lower is better) Translates to: NRTTGAPNHGHALTRHEKALSES*HSSTTL Trigger: TAATGTTGTGGATGAATGCCAGCTTTCAGACAGAGC...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR GCA 72 bp | TGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTaGACTTTCAGACGCGGATCTTGGAAATCCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: CMWRQFQVQTMY*TFRRGSWKSRT Trigger: AGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CCA 72 bp | AAAGCTATTCAACTCTCAGCGGTGGAGGAGTGCATGTaGCGGCAGTTTCAGGTACAAACGATGTACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: KAIQLSAVEECM*RQFQVQTMYCT Trigger: AGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CCA 72 bp | CCCATTGCAGAAGAAAAGCTATTCAACTCTCAGCGGTaGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAA | + |
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Preference number: 3 (lower is better) Translates to: PIAEEKLFNSQR*RSACGGSFRYK Trigger: TTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTTCTTCTGCAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR CCA 72 bp | TCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGTaGGCAGAATCAAACGCATCACTCCCAACTCCCATT | + |
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Preference number: 3 (lower is better) Translates to: SHKDLIALAQAL*AESNASLPTPI Trigger: AATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR GCA 72 bp | AGAAGAAAAGCTATTCAACTCTCAGCGGTGGAGGAGTaGATGTGGCGGCAGTTTCAGGTACAAACGATGTAC | + |
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Preference number: 3 (lower is better) Translates to: RRKAIQLSAVEE*MWRQFQVQTMY Trigger: GTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CAA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAATTTCAGACGCGGATCTaGGAAATCCAGGACTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: NRTTGAPNHGHALTRHEKFQTRI*EIQDFL Trigger: CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAA...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CAA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGAGGAAGAATGGAGGATaGGCATTGAGATCCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWRKNGG*ALRSMW Trigger: CCACATGGATCTCAATGCCAATCCTCCATTCTTCCT...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CAA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTACACTCCCAACTCCCATaGCAGAAGAAAAGCTATTCA | + |
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Preference number: 3 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLHSQLP*QKKSYS Trigger: TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTG...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAAGTAGGATGAGAGAATGTTTGTCACTCCCAAAAATATCTGGAGAGGAACACTCCCAACTCCCATaGCAGAAGAAAAGCTATTCA | + |
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Preference number: 3 (lower is better) Translates to: RLSRMRECLSLPKISGEEHSQLP*QKKSYS Trigger: TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTG...TTCCTCTCCAGATATTTTTGGGAGTGACAAACATTCTCTCATCCTACTTAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCCGGCCTCAGCAGCTTTaGGGGCCTCGCCGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGTGPVGRIKRITPNSHCRPQQL*GPRRPQ Trigger: CTGCGGGCGGCGAGGCCCCCAAAGCTGCTGAGGCCG...GCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | AGATCTGATTGCCTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCGCAGCGAGGTTGGGGTaGGCCCCAGCTGCAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RSDCLGTGPVGRIKRITPAARLG*APAAGA Trigger: CGCGCCTGCAGCTGGGGCTCACCCCAACCTCGCTGC...GGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAGGCAATCAGATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGGCGTCGTCTGGCTGGTaGCTGGCCGCTGGCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLASSGW*LAAGGG Trigger: GCCTCCGCCAGCGGCCAGGCACCAGCCAGACGACGC...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322611.4 |
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| CDS-3UTR GCA 90 bp | TGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGCCTGAGTTAGCGCGGTaGCGCCGAGAGGCCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: WHRPCGQNQTHHSQLPLQPELAR*RREAGV Trigger: GACCCCGGCCTCTCGGCGGCACCGCGCTAACTCAGG...CTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322611.4 |
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| CDS-3UTR CCA 90 bp | AGATCTGATTGCCTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCTCGGGGGCTCAGCCTTaGCCTCTGCCGCGCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RSDCLGTGPVGRIKRITPSGAQP*PLPRPP Trigger: CGGAGGGCGCGGCAGAGGCCAAGGCTGAGCCCCCGA...GGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAGGCAATCAGATCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACGGCCTCAGCAGCTTTaGGGGCCTCGCCGCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRWRSACGGSFRYKRCTARPQQL*GPRRPQ Trigger: CTGCGGGCGGCGAGGCCCCCAAAGCTGCTGAGGCCG...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCAGGGCCCCGTCACTTTTaGTCTCCTGGGCGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QRWRSACGGSFRYKRCTAGPRHF*SPGRQE Trigger: CTCCTGCCGCCCAGGAGACCAAAAGTGACGGGGCCC...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGGGGCAGCCTCCGAGCTaGCGGGTTTTGAGTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLGQPPS*RVLSLK Trigger: CTTCAGACTCAAAACCCGGCAGCTCGGAGGCTGCCC...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | GGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCATCGGGGGCTCAGCCTTaGCCTCTGCCGCGCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GQNQTHHSQLPLQKKSYSSGAQP*PLPRPP Trigger: CGGAGGGCGCGGCAGAGGCCAAGGCTGAGCCCCCGA...TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | TGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGTTCAACTCTCAGCGGTaGAGGAGTGCATGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WHRPCGQNQTHHSQLPLQFNSQR*RSACGG Trigger: GCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAA...CTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AAACACAGAAAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGAGAGGCCGGGGTCGCTaGCGTCGTCTGGCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KHRKYCSHKDLIALAQALRGRGR*RRLAGA Trigger: GGCACCAGCCAGACGACGCCAGCGACCCCGGCCTCT...CAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTTTCTGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322611.4 |
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| CDS-3UTR CCA 90 bp | CTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCTTGGCACAGGCCCTGTaGGCAGAATCAAACGCATCA | + |
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Preference number: 4 (lower is better) Translates to: LGTGPVGRIKRITPNSHCLAQAL*AESNAS Trigger: TGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAA...GCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGGCTCTCATAAAGATCTaGTTGCCTTGGCACAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLALIKI*LPWHRP Trigger: GGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGC...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | AAAAGCTATTCAACTCTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTTCAGCGGTGGAGGAGTaGATGTGGCGGCAGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KSYSTLSGGGVHVAAVSGSAVEE*MWRQFQ Trigger: CTGAAACTGCCGCCACATGCACTCCTCCACCGCTGA...ACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAACAGGCGCGTCTGGGCTaGGCCGCTGCAAACGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: NRTTGAPNHGHALTRHEKQARLG*AAANEL Trigger: CAACTCGTTTGCAGCGGCGCAGCCCAGACGCGCCTG...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | GGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCATTGCCCTCGGCGTCCTaGTCGGGCTTCTCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GQNQTHHSQLPLQKKSYSLPSAS*SGFSLP Trigger: GGGCAAGGAGAAGCCCGACCAGGACGCCGAGGGCAA...TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGGTATTGCCCTCGGCGTCCTaGTCGGGCTTCTCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NDVLHFQTRILEIQDFLVLPSAS*SGFSLP Trigger: GGGCAAGGAGAAGCCCGACCAGGACGCCGAGGGCAA...TACCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGTCGGGGCCTCCTCCTTaGCAGCCGCCGCGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWSGPPP*QPPRPS Trigger: AGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCCCGA...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTATCGGGGCCTCCTCCTTaGCAGCCGCCGCGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLSGPPP*QPPRPS Trigger: AGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCCCGA...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAGGCTGGCAGCGAGGTTaGGGTGAGCCCCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLGWQRG*GEPQLQ Trigger: CTGCAGCTGGGGCTCACCCCAACCTCGCTGCCAGCC...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | TGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGATGGAGGATTGGCATTaGGATCCATGTGGACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: WHRPCGQNQTHHSQLPLQMEDWH*DPCGQA Trigger: AGCTTGTCCACATGGATCTCAATGCCAATCCTCCAT...CTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAACTGGGCGGCAGGAGCTaGGGGCGCCTCAGTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: NRTTGAPNHGHALTRHEKLGGRS*GRLSLF Trigger: AAAAAGACTGAGGCGCCCGCAGCTCCTGCCGCCCAG...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AGGCTAAGTAGGATGAGAGAATGTTTGTCACTCCCAAAAATATCTGGAGAGGAAGAGCGAGGAGCCAGTTaGAGCGCTGCCGCCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSRMRECLSLPKISGEEERGAS*SAAAAV Trigger: GACGGCGGCGGCAGCGCTCCAACTGGCTCCTCGCTC...TTCCTCTCCAGATATTTTTGGGAGTGACAAACATTCTCTCATCCTACTTAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000322611.4 |
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| CDS-3UTR CCA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGGGGCCCCGTCACTTTTaGTCTCCTGGGCGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWGPRHF*SPGRQE Trigger: CTCCTGCCGCCCAGGAGACCAAAAGTGACGGGGCCC...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCATGTGGACAAGCTAAGTaGGCTCTGTCTGAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWRSACGGSFRYKRCTACGQAK*ALSESW Trigger: CCAGCTTTCAGACAGAGCCCACTTAGCTTGTCCACA...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CCA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCAGCTGCAGGCGCGTCTaGGCTGCGCCGCTGCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLSCRRV*AAPLQT Trigger: CGTTTGCAGCGGCGCAGCCCAGACGCGCCTGCAGCT...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGCTGGGCGGCAGGAGCTaGGGGCGCCTCAGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWLGGRS*GRLSLF Trigger: AAAAAGACTGAGGCGCCCGCAGCTCCTGCCGCCCAG...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCATTCAGACGCGGATCTTaGAAATCCAGGACTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWRSACGGSFRYKRCTAFRRGS*KSRTSW Trigger: CCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAA...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCTATTCAACTCTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTGTGGAGGAGTGCATGTaGCGGCAGTTTCAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KSYSTLSGGGVHVAAVSGVEECM*RQFQVQ Trigger: TTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC...ACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAATAGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ACAAACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGGCTTGCCTCCCATCTTaGAGTTCTCGGCTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TNDVLHFQTRILEIQDFLACLPS*SSRLAA Trigger: CGCTGCCAGCCGAGAACTCCAAGATGGGAGGCAAGC...CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616743.1 |
||
| CDS-3UTR GCA 90 bp | AACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGGTATCAGCGGTGGAGGAGTaGATGTGGCGGCAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDVLHFQTRILEIQDFLVSAVEE*MWRQFQ Trigger: CTGAAACTGCCGCCACATGCACTCCTCCACCGCTGA...TACCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAGCTTGCCTCCCATCTTaGAGTTCGGCTCTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLACLPS*SSALGA Trigger: GGCACCCAGAGCCGAACTCCAAGATGGGAGGCAAGC...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322611.4 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAATCTGGAGAGGAAGAATaGAGGATTGGCATTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AQALWAESNASLPTPIAESGEEE*RIGIEI Trigger: GATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGA...TTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGCTTGGAGTTCTCGGCTaGCAGCGAGGTTGGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWLGVLG*QRGWGE Trigger: CTCACCCCAACCTCGCTGCCAGCCGAGAACTCCAAG...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616743.1 |
||
| CDS-3UTR TCA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGTTTTCCATTTTCCAATaGGTGGTGTGTTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLFSIFQ*VVCWCL Trigger: CAGACACCAACACACCACTCATTGGAAAATGGAAAA...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCAGCTCTGTCTGAAAGCTaGCATTCATCCACAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: QRWRSACGGSFRYKRCTAALSES*HSSTTL Trigger: TAATGTTGTGGATGAATGCCAGCTTTCAGACAGAGC...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CCA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGGAATGGAAGAGAAACTaGAACTGCAATGAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLEWKRN*NCNERR Trigger: TCTGCGTTCATTGCAGTTCCAGTTTCTCTTCCATTC...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | GGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAAGTGGGATGGAGGATTGGCATTaGGATCCATGTGGACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEEEWRIGIEIHVDKLSGMEDWH*DPCGQA Trigger: AGCTTGTCCACATGGATCTCAATGCCAATCCTCCAT...CCCACTTAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | GTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCGTACAAACGATGTACTaGACTTTCAGACGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VEECMWRQFQVQTMYCTFVQTMY*TFRRGS Trigger: AGATCCGCGTCTGAAAGTGCAGTACATCGTTTGTAC...GAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | CTTGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAAGAGAAACTGGAACTaGAATGAACGCAGACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTGPVGRIKRITPNSHCKRNWN*NERRLF Trigger: AAAAAGTCTGCGTTCATTGCAGTTCCAGTTTCTCTT...GCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR TCA 90 bp | GTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCTTTTCCATTTTCCAATaGGTGGTGTGTTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VEECMWRQFQVQTMYCTFFSIFQ*VVCWCL Trigger: CAGACACCAACACACCACTCATTGGAAAATGGAAAA...GAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | AACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGGTAAAACAGAACTACAGGTaGACCCAACCACGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: NDVLHFQTRILEIQDFLVKQNYR*TQPRTC Trigger: GCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTTT...TACCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | TTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAAACTGGGTGGAGGAGTGCATGTaGCGGCAGTTTCAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSNEWCVGVCDTEWKRNWVEECM*RQFQVQ Trigger: TTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC...CCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AGGCTAAGTAGGATGAGAGAATGTTTGTCACTCCCAAAAATATCTGGAGAGGAATTCAACTCTCAGCGGTaGAGGAGTGCATGTGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSRMRECLSLPKISGEEFNSQR*RSACGG Trigger: GCCGCCACATGCACTCCTCCACCGCTGAGAGTTGAA...TTCCTCTCCAGATATTTTTGGGAGTGACAAACATTCTCTCATCCTACTTAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ACAAACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGTGTGGACAAGCTAAGTaGGCTCTGTCTGAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNDVLHFQTRILEIQDFLCGQAK*ALSESW Trigger: CCAGCTTTCAGACAGAGCCCACTTAGCTTGTCCACA...CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCGCTCTCATAAAGATCTaGTTGCCTTGGCACAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLALIKI*LPWHRP Trigger: GGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGC...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAAAACAGAACTACAGGTaGACCCAACCACGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLKQNYR*TQPRTC Trigger: GCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTTT...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCTTGGCACAGGCCCTGTaGGCAGAATCAAACGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLLAQAL*AESNAS Trigger: TGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCAA...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR TCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAGTGTGTTGGTGTCTGTaGCACAGAATGGAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLVCWCL*HRMEEK Trigger: TTTCTCTTCCATTCTGTGTCACAGACACCAACACAC...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | AAACACAGAAAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGGTACAAACGATGTACTaGACTTTCAGACGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHRKYCSHKDLIALAQALVQTMY*TFRRGS Trigger: AGATCCGCGTCTGAAAGTGCAGTACATCGTTTGTAC...CAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTTTCTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTACCATTTTCCAATGAGTaGTGTGTTGGTGTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLPFSNE*CVGVCD Trigger: GTCACAGACACCAACACACCACTCATTGGAAAATGG...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AGGCTAAGTAGGATGAGAGAATGTTTGTCACTCCCAAAAATATCTGGAGAGGAATTCAGACGCGGATCTTaGAAATCCAGGACTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSRMRECLSLPKISGEEFRRGS*KSRTSW Trigger: CCAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAA...TTCCTCTCCAGATATTTTTGGGAGTGACAAACATTCTCTCATCCTACTTAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAGCTCTGTCTGAAAGCTaGCATTCATCCACAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLALSES*HSSTTL Trigger: TAATGTTGTGGATGAATGCCAGCTTTCAGACAGAGC...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | TTCCATTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAATCTGGAGAGGAAGAATaGAGGATTGGCATTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FHFPMSGVLVSVTQNGRESGEEE*RIGIEI Trigger: GATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGA...TTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | TTCCATTTTCCAATGAGTGGTGTGTTGGTGTCTGTGACACAGAATGGAAGAGAACCATTTTCCAATGAGTaGTGTGTTGGTGTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHFPMSGVLVSVTQNGREPFSNE*CVGVCD Trigger: GTCACAGACACCAACACACCACTCATTGGAAAATGG...TTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR GCA 90 bp | ATATCTGGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAAAGAGAAACTGGAACTaGAATGAACGCAGACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISGEEEWRIGIEIHVDKLKRNWN*NERRLF Trigger: AAAAAGTCTGCGTTCATTGCAGTTCCAGTTTCTCTT...TAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCCAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CCA 90 bp | AGGCTAAGTAGGATGAGAGAATGTTTGTCACTCCCAAAAATATCTGGAGAGGAAGAATGGAAGAGAAACTaGAACTGCAATGAACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSRMRECLSLPKISGEEEWKRN*NCNERR Trigger: TCTGCGTTCATTGCAGTTCCAGTTTCTCTTCCATTC...TTCCTCTCCAGATATTTTTGGGAGTGACAAACATTCTCTCATCCTACTTAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS TCA 90 bp | GCTTGCCTCCCATCTTGGAGTTCTCGGCTGGCAGCGAGGTTGGGGTaGGCCCCAGCTGCAGGCGCGTCTGGGCTGCGCCGCTGCAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: ACLPSWSSRLAARLG*APAAGASGLRRCKR Trigger: TCGTTTGCAGCGGCGCAGCCCAGACGCGCCTGCAGCTGGGGCTCACCCCAACCTCGCTGCCAGCCGAGAACTCCAAGATGGGAGGCAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGGCGGCCTCAGCAGCTTaGGGGGCCTCGCCGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLAASAA*GASPPA Trigger: TGCGGGCGGCGAGGCCCCCAAAGCTGCTGAGGCCGC...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCGCGGCCTCAGCAGCTTaGGGGGCCTCGCCGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEECMWRQFQVQTMYCTFAASAA*GASPPA Trigger: TGCGGGCGGCGAGGCCCCCAAAGCTGCTGAGGCCGC...GAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCGGAGCGAGGAGCCAGTaGGAGCGCTGCCGCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VEECMWRQFQVQTMYCTFGARSQ*ERCRRR Trigger: ACGGCGGCGGCAGCGCTCCAACTGGCTCCTCGCTCC...GAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322611.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGTTCGGGGGCTCAGCCTaGGCCTCTGCCGCGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNDVLHFQTRILEIQDFLFGGSA*ASAAPS Trigger: GGAGGGCGCGGCAGAGGCCAAGGCTGAGCCCCCGAA...CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | TGGCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAAGATCTGATTGCCTaGGCACAGGCCCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WHRPCGQNQTHHSQLPLQKDLIA*AQALWA Trigger: TGCCCACAGGGCCTGTGCCAAGGCAATCAGATCTTT...CTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCATGGTCGGGCTTCTCCTaGCCCTCCTTGGCCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQNQTHHSQLPLQKKSYSWSGFS*PSLASA Trigger: CGCCGAGGCCAAGGAGGGCAAGGAGAAGCCCGACCA...TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCTTCGGGGGCTCAGCCTaGGCCTCTGCCGCGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLFGGSA*ASAAPS Trigger: GGAGGGCGCGGCAGAGGCCAAGGCTGAGCCCCCGAA...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | GCACAGGCCCTGTGGGCAGAATCAAACGCATCACTCCCAACTCCCATTGCAGAAAAAGATCTGATTGCCTaGGCACAGGCCCTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQALWAESNASLPTPIAEKDLIA*AQALWA Trigger: TGCCCACAGGGCCTGTGCCAAGGCAATCAGATCTTT...TTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATTCTGCCCACAGGGCCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAAGTGGGAGCTTGCCTCCCATCTaGGAGTTCGGCTCTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GEEEWRIGIEIHVDKLSGSLPPI*EFGSGC Trigger: GCACCCAGAGCCGAACTCCAAGATGGGAGGCAAGCT...CCCACTTAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322611.4 |
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| CDS-3UTR CAA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCTTCGGGGCCTCCTCCTaGGCAGCCGCCGCGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLFGASS*AAAASF Trigger: GAAGGACGCGGCGGCTGCCAAGGAGGAGGCCCCGAA...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS CCA 90 bp | AGCCTGGGTAACATACAGAGATGTCATCTCTTCAGCAATAGTCCCTaGGCCCAGAGGGAGGCAGCTTGGATAGTTCTGGCAGCAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SLGNIQRCHLFSNSP*AQREAAWIVLAAEH Trigger: ATGCTCTGCTGCCAGAACTATCCAAGCTGCCTCCCTCTGGGCCCAGGGACTATTGCTGAAGAGATGACATCTCTGTATGTTACCCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606445.1 |
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| CDS-3UTR CAA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCTGGTCGGGCTTCTCCTaGCCCTCCTTGGCCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLWSGFS*PSLASA Trigger: CGCCGAGGCCAAGGAGGGCAAGGAGAAGCCCGACCA...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCAAATGGAGGATTGGCATaGAGATCCATGTGGACAAGC | + |
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Preference number: 5 (lower is better) Translates to: QRWRSACGGSFRYKRCTANGGLA*RSMWTS Trigger: GCTTGTCCACATGGATCTCAATGCCAATCCTCCATT...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | CAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACCAATGAGTGGTGTGTaGGTGTCTGTGACACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: QRWRSACGGSFRYKRCTAPMSGV*VSVTQN Trigger: ATTCTGTGTCACAGACACCAACACACCACTCATTGG...TGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | AACAGAACTACAGGTGCACCCAACCACGGACATGCATTAACTCGTCATGAGAAAAGCTTGCCTCCCATCTaGGAGTTCTCGGCTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NRTTGAPNHGHALTRHEKSLPPI*EFSAGS Trigger: GCTGCCAGCCGAGAACTCCAAGATGGGAGGCAAGCT...TTTCTCATGACGAGTTAATGCATGTCCGTGGTTGGGTGCACCTGTAGTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | GTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGCACTTTCCACTCCCAACTCCCATaGCAGAAGAAAAGCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: VEECMWRQFQVQTMYCTFHSQLP*QKKSYS Trigger: TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTG...GAAAGTGCAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | GGAGAGGAAGAATGGAGGATTGGCATTGAGATCCATGTGGACAAGCTAAGTGGGAGGAAGAATGGAGGATaGGCATTGAGATCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: GEEEWRIGIEIHVDKLSGRKNGG*ALRSMW Trigger: CCACATGGATCTCAATGCCAATCCTCCATTCTTCCT...CCCACTTAGCTTGTCCACATGGATCTCAATGCCAATCCTCCATTCTTCCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | CTCAGCGGTGGAGGAGTGCATGTGGCGGCAGTTTCAGGTACAAACGATGTACTGAGGATGAGAGAATGTTaGTCACTCCCAAAAATATCT | + |
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Preference number: 5 (lower is better) Translates to: LSGGGVHVAAVSGTNDVLRMREC*SLPKIS Trigger: AGATATTTTTGGGAGTGACAAACATTCTCTCATCCT...CAGTACATCGTTTGTACCTGAAACTGCCGCCACATGCACTCCTCCACCGCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | AAACACAGAAAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGTTTCAGACGCGGATCTaGGAAATCCAGGACTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KHRKYCSHKDLIALAQALFQTRI*EIQDFL Trigger: CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAA...CAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTTTCTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | AAACACAGAAAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGAATGGAGGATTGGCATaGAGATCCATGTGGACAAGC | + |
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Preference number: 5 (lower is better) Translates to: KHRKYCSHKDLIALAQALNGGLA*RSMWTS Trigger: GCTTGTCCACATGGATCTCAATGCCAATCCTCCATT...CAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTTTCTGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | AAACACAGAAAATACTGCTCTCATAAAGATCTGATTGCCTTGGCACAGGCCCTGCACTCCCAACTCCCATaGCAGAAGAAAAGCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: KHRKYCSHKDLIALAQALHSQLP*QKKSYS Trigger: TGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTG...CAGGGCCTGTGCCAAGGCAATCAGATCTTTATGAGAGCAGTATTTTCTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | AATCAAACGCATCACTCCCAACTCCCATTGCAGAAGAAAAGCTATTCAACTCTCCCAATGAGTGGTGTGTaGGTGTCTGTGACACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: NQTHHSQLPLQKKSYSTLPMSGV*VSVTQN Trigger: ATTCTGTGTCACAGACACCAACACACCACTCATTGG...GAGAGTTGAATAGCTTTTCTTCTGCAATGGGAGTTGGGAGTGATGCGTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS-3UTR CAA 90 bp | ACAAACGATGTACTGCACTTTCAGACGCGGATCTTGGAAATCCAGGACTTCTTGAGGATGAGAGAATGTTaGTCACTCCCAAAAATATCT | + |
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Preference number: 5 (lower is better) Translates to: TNDVLHFQTRILEIQDFLRMREC*SLPKIS Trigger: AGATATTTTTGGGAGTGACAAACATTCTCTCATCCT...CAAGAAGTCCTGGATTTCCAAGATCCGCGTCTGAAAGTGCAGTACATCGTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322611.4 ENST00000616743.1 |
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| CDS CCA 72 bp | GCCTCCCATCTTGGAGTTCTCGGCTGGCAGCGAGGTTaGGGTGAGCCCCAGCTGCAGGCGCGTCTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASHLGVLGWQRG*GEPQLQARLGC Trigger: GCAGCCCAGACGCGCCTGCAGCTGGGGCTCACCCCAACCTCGCTGCCAGCCGAGAACTCCAAGATGGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616743.1 |
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| CDS CCA 72 bp | AACATACAGAGATGTCATCTCTTCAGCAATAGTCCCTaGGCCCAGAGGGAGGCAGCTTGGATAGTTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: NIQRCHLFSNSP*AQREAAWIVLA Trigger: TGCCAGAACTATCCAAGCTGCCTCCCTCTGGGCCCAGGGACTATTGCTGAAGAGATGACATCTCTGTATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606445.1 |
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| CDS CAA 72 bp | TGCATGAGATCCAAGAATCCTCCCTTGGGGTCTGGATaGGGACCCTTTCCTGTAATCCCAACACTTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CMRSKNPPLGSG*GPFPVIPTLQE Trigger: CTCCTGAAGTGTTGGGATTACAGGAAAGGGTCCCAATCCAGACCCCAAGGGAGGATTCTTGGATCTCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606445.1 |
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| CDS CAA 72 bp | AGCTTGCCTCCCATCTTGGAGTTCCTGAATTCTTTCTaGCATGAGATCCAAGAATCCTCCCTTGGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLPPILEFLNSF*HEIQESSLGVW Trigger: CCAGACCCCAAGGGAGGATTCTTGGATCTCATGCAAGAAAGAATTCAGGAACTCCAAGATGGGAGGCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606445.1 |
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