Pregenerated sensors for BARX1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000235601Ensembl transcript IDs: ENST00000453045.1, ENST00000454594.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCACCCTTGCCGGGTTGGCGGTGTTGAGCCCGGGACTGGAGGCTaGTTGAGACCACCTCCTTCCCAGCTGAGGAGCGCGGCCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPCRVGGVEPGTGG*LRPPPSQLRSAAFA Trigger: GGCAAAGGCCGCGCTCCTCAGCTGGGAAGGAGGTGGTCTCAAGCAGCCTCCAGTCCCGGGCTCAACACCGCCAACCCGGCAAGGGTGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS GCA 90 bp | GTGCACAGGTGCCGCTACCGCTCTGCCCCTTGCATCCCTGAACGCTaGCTCACCCTTGCCGGGTTGGCGGTGTTGAGCCCGGGACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VHRCRYRSAPCIPER*LTLAGLAVLSPGLE Trigger: CTCCAGTCCCGGGCTCAACACCGCCAACCCGGCAAGGGTGAGGCAGCGTTCAGGGATGCAAGGGGCAGAGCGGTAGCGGCACCTGTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS GCA 90 bp | GCAGAGGTGGGAGGGGTGCACAGGTGCCGCTACCGCTCTGCCCCTTaGATCCCTGAACGCTGCCTCACCCTTGCCGGGTTGGCGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AEVGGVHRCRYRSAP*IPERCLTLAGLAVL Trigger: CAACACCGCCAACCCGGCAAGGGTGAGGCAGCGTTCAGGGATGCAAGGGGCAGAGCGGTAGCGGCACCTGTGCACCCCTCCCACCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS TCA 90 bp | CTTGCATCCCTGAACGCTGCCTCACCCTTGCCGGGTTGGCGGTGTTaGGCCCGGGACTGGAGGCTGCTTGAGACCACCTCCTTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LASLNAASPLPGWRC*ARDWRLLETTSFPA Trigger: AGCTGGGAAGGAGGTGGTCTCAAGCAGCCTCCAGTCCCGGGCTCAACACCGCCAACCCGGCAAGGGTGAGGCAGCGTTCAGGGATGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS TCA 90 bp | CCCTCCAAGCGATGCACGATCCCCCTGCCGCTGGCTGCTGGCCGCTaGGCCTGCTCGAGTGCTCCTTCCAGACTTAGCTTCCTCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSKRCTIPLPLAAGR*ACSSAPSRLSFLLC Trigger: ACAGAGGAGGAAGCTAAGTCTGGAAGGAGCACTCGAGCAGGCTCAGCGGCCAGCAGCCAGCGGCAGGGGGATCGTGCATCGCTTGGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454594.1 |
||
| CDS GCA 90 bp | AGGCTGCTTGAGACCACCTCCTTCCCAGCTGAGGAGCGCGGCCTTTaGCCCTCCTCCTCCCGACCTTTCCGGGGCTACCTAAAAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLLETTSFPAEERGL*PSSSRPFRGYLKAD Trigger: ATCGGCTTTTAGGTAGCCCCGGAAAGGTCGGGAGGAGGAGGGGCAAAGGCCGCGCTCCTCAGCTGGGAAGGAGGTGGTCTCAAGCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS GCA 90 bp | TCTCCAAACAGACCTAAGGGCTCCCAGGGTGCAGGACCCTCGGAGTaGAGGACCCCCTCACTGAGTTCTCACAGTCTCTCTGGAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPNRPKGSQGAGPSE*RTPSLSSHSLSGAK Trigger: TTTGGCTCCAGAGAGACTGTGAGAACTCAGTGAGGGGGTCCTGCACTCCGAGGGTCCTGCACCCTGGGAGCCCTTAGGTCTGTTTGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 90 bp | GCTCCTTCCAGACTTAGCTTCCTCCTCTGTACAACGAACGGCTCCTaGACCCGTTCGCACGCGGAGCCATTTCACAATCCCGTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: APSRLSFLLCTTNGS*TRSHAEPFHNPVWE Trigger: CTCCCAGACGGGATTGTGAAATGGCTCCGCGTGCGAACGGGTCCAGGAGCCGTTCGTTGTACAGAGGAGGAAGCTAAGTCTGGAAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454594.1 |
||
| CDS CCA 90 bp | GCTTCTGTTAGGGCCCAAATAACAGGGGATGGGACAGAGGCTAGCTaGGCCTACTCAGGGGAGAAACCACCACTAGGCTATGCCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASVRAQITGDGTEAS*AYSGEKPPLGYALR Trigger: CCTAAGGGCATAGCCTAGTGGTGGTTTCTCCCCTGAGTAGGCCCAGCTAGCCTCTGTCCCATCCCCTGTTATTTGGGCCCTAACAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 90 bp | ACTGCCAACTTCCTCCACCATGTTGGAGCTTTTGAGGCTCCGCAATaGAGCCAGGTCCCACCAGAGTTTGGTCTTTACACTCTCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TANFLHHVGAFEAPQ*SQVPPEFGLYTLRA Trigger: TGCTCTGAGAGTGTAAAGACCAAACTCTGGTGGGACCTGGCTCCATTGCGGAGCCTCAAAAGCTCCAACATGGTGGAGGAAGTTGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 90 bp | TGTGTCCATGGATCACTTGAATTTCCAATTCAAGCAAATCTCGGCTaGAGAACATTTTTCTCTCAGGGCAGCCCGGAGAGAAATGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CVHGSLEFPIQANLG*RTFFSQGSPERNEA Trigger: GGCCTCATTTCTCTCCGGGCTGCCCTGAGAGAAAAATGTTCTCCAGCCGAGATTTGCTTGAATTGGAAATTCAAGTGATCCATGGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS GCA 72 bp | GCCCTCCAAGCGATGCACGATCCCCCTGCCGCTGGCTaGTGGCCGCTGAGCCTGCTCGAGTGCTCCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALQAMHDPPAAG*WPLSLLECSFQ Trigger: CTGGAAGGAGCACTCGAGCAGGCTCAGCGGCCAGCAGCCAGCGGCAGGGGGATCGTGCATCGCTTGGAGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454594.1 |
||
| CDS GCA 72 bp | TGCCGGGTTGGCGGTGTTGAGCCCGGGACTGGAGGCTaGTTGAGACCACCTCCTTCCCAGCTGAGGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CRVGGVEPGTGG*LRPPPSQLRSA Trigger: CGCGCTCCTCAGCTGGGAAGGAGGTGGTCTCAAGCAGCCTCCAGTCCCGGGCTCAACACCGCCAACCCGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS TCA 72 bp | CTGAACGCTGCCTCACCCTTGCCGGGTTGGCGGTGTTaGGCCCGGGACTGGAGGCTGCTTGAGACCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LNAASPLPGWRC*ARDWRLLETTS Trigger: GGAGGTGGTCTCAAGCAGCCTCCAGTCCCGGGCTCAACACCGCCAACCCGGCAAGGGTGAGGCAGCGTTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS GCA 72 bp | GAGACCACCTCCTTCCCAGCTGAGGAGCGCGGCCTTTaGCCCTCCTCCTCCCGACCTTTCCGGGGCTACCTA | + |
|
Preference number: 6 (lower is better) Translates to: ETTSFPAEERGL*PSSSRPFRGYL Trigger: TAGGTAGCCCCGGAAAGGTCGGGAGGAGGAGGGGCAAAGGCCGCGCTCCTCAGCTGGGAAGGAGGTGGTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS TCA 72 bp | CGATGCACGATCCCCCTGCCGCTGGCTGCTGGCCGCTaGGCCTGCTCGAGTGCTCCTTCCAGACTTAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCTIPLPLAAGR*ACSSAPSRLSF Trigger: GAAGCTAAGTCTGGAAGGAGCACTCGAGCAGGCTCAGCGGCCAGCAGCCAGCGGCAGGGGGATCGTGCATCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454594.1 |
||
| CDS CCA 72 bp | AGGGCCCAAATAACAGGGGATGGGACAGAGGCTAGCTaGGCCTACTCAGGGGAGAAACCACCACTAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RAQITGDGTEAS*AYSGEKPPLGY Trigger: ATAGCCTAGTGGTGGTTTCTCCCCTGAGTAGGCCCAGCTAGCCTCTGTCCCATCCCCTGTTATTTGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 72 bp | AGACTTAGCTTCCTCCTCTGTACAACGAACGGCTCCTaGACCCGTTCGCACGCGGAGCCATTTCACAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSFLLCTTNGS*TRSHAEPFHNP Trigger: GGGATTGTGAAATGGCTCCGCGTGCGAACGGGTCCAGGAGCCGTTCGTTGTACAGAGGAGGAAGCTAAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454594.1 |
||
| CDS CAA 72 bp | GCAGGACCAAAGAGAGGAGTTCAGCGTAGGGTAGCTTaGGGGTTGTTCACTCCACGGCTTGGGCTTATACTC | + |
|
Preference number: 6 (lower is better) Translates to: AGPKRGVQRRVA*GLFTPRLGLIL Trigger: GAGTATAAGCCCAAGCCGTGGAGTGAACAACCCCAAAGCTACCCTACGCTGAACTCCTCTCTTTGGTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 72 bp | ACTCCGCCCAGTAACAGTTTCTTGATGCCCCAAAGCTaGGAAAAGGCAAAGCTGCATCCTTCCCTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPPSNSFLMPQS*EKAKLHPSLLL Trigger: GAGGAGAAGGGAAGGATGCAGCTTTGCCTTTTCCCAGCTTTGGGGCATCAAGAAACTGTTACTGGGCGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CCA 72 bp | TTCCTCCACCATGTTGGAGCTTTTGAGGCTCCGCAATaGAGCCAGGTCCCACCAGAGTTTGGTCTTTACACT | + |
|
Preference number: 6 (lower is better) Translates to: FLHHVGAFEAPQ*SQVPPEFGLYT Trigger: AGTGTAAAGACCAAACTCTGGTGGGACCTGGCTCCATTGCGGAGCCTCAAAAGCTCCAACATGGTGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CAA 90 bp | GATCTAGAGAAGGTACTGCCAACTTCCTCCACCATGTTGGAGCTTTaGAGGCTCCGCAATGGAGCCAGGTCCCACCAGAGTTTGGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLEKVLPTSSTMLEL*RLRNGARSHQSLVF Trigger: AAAGACCAAACTCTGGTGGGACCTGGCTCCATTGCGGAGCCTCAAAAGCTCCAACATGGTGGAGGAAGTTGGCAGTACCTTCTCTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CAA 90 bp | GGAAAGAAAGATCTAGAGAAGGTACTGCCAACTTCCTCCACCATGTaGGAGCTTTTGAGGCTCCGCAATGGAGCCAGGTCCCACCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GKKDLEKVLPTSSTM*ELLRLRNGARSHQS Trigger: ACTCTGGTGGGACCTGGCTCCATTGCGGAGCCTCAAAAGCTCCAACATGGTGGAGGAAGTTGGCAGTACCTTCTCTAGATCTTTCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CAA 72 bp | CTGGGGGCTGTCAAGGAGGATGTGTCCATGGATCACTaGAATTTCCAATTCAAGCAAATCTCGGCTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGAVKEDVSMDH*NFQFKQISAGE Trigger: TTCTCCAGCCGAGATTTGCTTGAATTGGAAATTCAAGTGATCCATGGACACATCCTCCTTGACAGCCCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CAA 72 bp | ATGGGGGAGGTGAGGGAGGAAGCCGGAAAAAGGAGCTaGATATGGCTCTGTACAAGAAGCAATAGTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: MGEVREEAGKRS*IWLCTRSNSKP Trigger: TGGTTTACTATTGCTTCTTGTACAGAGCCATATCAAGCTCCTTTTTCCGGCTTCCTCCCTCACCTCCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||
| CDS CAA 90 bp | TACAGTCTTCTGGGGGCTGTCAAGGAGGATGTGTCCATGGATCACTaGAATTTCCAATTCAAGCAAATCTCGGCTGGAGAACATTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YSLLGAVKEDVSMDH*NFQFKQISAGEHFS Trigger: AGAAAAATGTTCTCCAGCCGAGATTTGCTTGAATTGGAAATTCAAGTGATCCATGGACACATCCTCCTTGACAGCCCCCAGAAGACTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000453045.1 |
||