RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BARD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138376

Ensembl transcript IDs: ENST00000260947.9, ENST00000421162.2, ENST00000432456.5, ENST00000455743.5, ENST00000471590.5, ENST00000471787.1, ENST00000479904.1, ENST00000613192.2, ENST00000613374.5, ENST00000613706.5, ENST00000617164.5, ENST00000619009.5, ENST00000620057.4, ENST00000650978.1

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: RMVCDCIDGLSHVTV*LGLSTEDLAPTCSD
Trigger: GTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR GCA 90 bp ATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGG +
Preference number: 1 (lower is better)
Translates to: ILCAEALIRIGSRMV*DCIDGLSHVTVWLG
Trigger: CCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR GCA 90 bp GTCACTGTCTGGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAA +
Preference number: 1 (lower is better)
Translates to: VTVWLGLSTEDLAPT*SDELNKVVLWMVFE
Trigger: TTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR CCA 90 bp GATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATC +
Preference number: 1 (lower is better)
Translates to: DLAPTCSDELNKVVL*MVFEGSPQIEVASI
Trigger: GATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR TCA 90 bp CTTGACTATATCCACATGCCCATTCTTGGCTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTTATGCTG +
Preference number: 1 (lower is better)
Translates to: LDYIHMPILGCIVKW*VILIPGGVHQCLML
Trigger: CAGCATAAGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAGCCAAGAATGGGCATGTGGATATAGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR CCA 90 bp CATTCTTGGCTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTaGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCT +
Preference number: 1 (lower is better)
Translates to: HSWLHREVVSHFDTR*CSPMPYAGAIIPLP
Trigger: AGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAGCCAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR TCA 90 bp AGCCTTAAGAATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACG +
Preference number: 1 (lower is better)
Translates to: SLKNYCKLTEHFLLF*RQPTAYKYKRSIPT
Trigger: CGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR GCA 90 bp GGTGAAGAACATTCAGGCAATGGTATATTTTCTGAGGGCACCGTTTaGTTAACAAAATCTCCACTGGTGCTCAGAATGCTGGTTCTACAT +
Preference number: 1 (lower is better)
Translates to: GEEHSGNGIFSEGTV*LTKSPLVLRMLVLH
Trigger: ATGTAGAACCAGCATTCTGAGCACCAGTGGAGATTTTGTTAAGCAAACGGTGCCCTCAGAAAATATACCATTGCCTGAATGTTCTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CCA 90 bp AAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATACTTTTCTTCCTGTTCACATACTTT +
Preference number: 1 (lower is better)
Translates to: KQLWQQLFSVEPASA*TFRNFILFFLFTYF
Trigger: AAAGTATGTGAACAGGAAGAAAAGTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR TCA 90 bp ATGTCGCCCTTAATAGAAGCAATATGGAGCAAAGTCTCTCCTCTATaGTTTCTTTTCACAGCCATATTGGGCAACAGCTTCATTGCTGAG +
Preference number: 1 (lower is better)
Translates to: MSPLIEAIWSKVSPL*FLFTAILGNSFIAE
Trigger: CTCAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACTTTGCTCCATATTGCTTCTATTAAGGGCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR GCA 90 bp GCATCCATTGAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTaGATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTC +
Preference number: 1 (lower is better)
Translates to: ASIENPKHTLQGTLN*ITRNNNMSYCTVKL
Trigger: GAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTCAATGGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR GCA 90 bp GGAGTCACTACTTCATTCCTGCTCTTAGTGTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAGACTTCAGTTAAACTTCCAAAACAT +
Preference number: 1 (lower is better)
Translates to: GVTTSFLLLVSGDSI*SANGKETSVKLPKH
Trigger: ATGTTTTGGAAGTTTAACTGAAGTCTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGGAATGAAGTAGTGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR GCA 90 bp ACATGTTACTGTTTTTCCTCCCTGATGTACCACCAACTTTACGTTTaGATGAAGGTGGTGAAGAACATTCAGGCAATGGTATATTTTCTG +
Preference number: 1 (lower is better)
Translates to: TCYCFSSLMYHQLYV*MKVVKNIQAMVYFL
Trigger: CAGAAAATATACCATTGCCTGAATGTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGTAACATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR TCA 90 bp ATGCTGGTTCTACATCTCTTAGAAATGGGACTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTATTTTCTAATGGCAAAGATTTCTTA +
Preference number: 1 (lower is better)
Translates to: MLVLHLLEMGLESLL*WPRFPLFSNGKDFL
Trigger: TAAGAAATCTTTGCCATTAGAAAATAATGGAAAACGTGGCCATCACAATAGACTTTCCAGTCCCATTTCTAAGAGATGTAGAACCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CCA 90 bp CTAACAAGTGGTTTTCAATTTCTCTATTTCTCTATTCCAGTACTCTaGAGAGCTATGCAACAATGTTATAACAGTAGCAACAGTAGCACA +
Preference number: 1 (lower is better)
Translates to: LTSGFQFLYFSIPVL*RAMQQCYNSSNSST
Trigger: TGTGCTACTGTTGCTACTGTTATAACATTGTTGCATAGCTCTCCAGAGTACTGGAATAGAGAAATAGAGAAATTGAAAACCACTTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR CCA 90 bp ATGCAACAATGTTATAACAGTAGCAACAGTAGCACACTGATGCAATaGAGAAGGCAGATGAGGAATAGTAAGAAATACAATAACTTTACT +
Preference number: 1 (lower is better)
Translates to: MQQCYNSSNSSTLMQ*RRQMRNSKKYNNFT
Trigger: AGTAAAGTTATTGTATTTCTTACTATTCCTCATCTGCCTTCTCCATTGCATCAGTGTGCTACTGTTGCTACTGTTATAACATTGTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR TCA 90 bp TCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: SINQLEGAFQTLPCRTLSAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...AGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QLWQQLFSVEPASAWTFREPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 2 (lower is better)
Translates to: SSKEPSRLCPAEPSLGDNCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...ATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp GACAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 2 (lower is better)
Translates to: DSPLPISTRGPSLRCPVFFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...GAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 2 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 2 (lower is better)
Translates to: LCAEALIRIGSRMVCDCIFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...AATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 2 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: QPTAYKYKRSIPTLPSVHPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...ATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GTCAAGAGGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: VKRKQLKGHHTVYKPARRAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...CCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCCTCTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp GACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 2 (lower is better)
Translates to: DITQSINQLEGAFQTLPCDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...GCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp TCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 2 (lower is better)
Translates to: SINQLEGAFQTLPCRTLSGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...AGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp GACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTGAGTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 2 (lower is better)
Translates to: DCIDGLSHVTVWLGLSTEFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACAAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 2 (lower is better)
Translates to: RRSLPDFALPNPLWVIITSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 2 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CGGTGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 2 (lower is better)
Translates to: RWCSPMPYAGAIIPLPSGCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...ACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 2 (lower is better)
Translates to: GLSTEDLAPTCSDELNKVPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: DDILCAEALIRIGSRMVCTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...GCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp TCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 2 (lower is better)
Translates to: STEDLAPTCSDELNKVVLTFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...AAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 2 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGAGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 2 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 2 (lower is better)
Translates to: GLSTEDLAPTCSDELNKVESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...AACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp GTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAAGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: VTSLIRLSFGWCLKVPHKEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...TTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp AACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 2 (lower is better)
Translates to: NSKDITQSINQLEGAFQTFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...AGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 2 (lower is better)
Translates to: HPSNSFGNSCSLLSLLLRASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...ACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp ACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: TEDLAPTCSDELNKVVLWLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...CCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
3UTR-3UTR TCA 90 bp ACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 2 (lower is better)
Translates to: TVCRSADQNRVSHGMRLYPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...ATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp ATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 2 (lower is better)
Translates to: IKQLWQQLFSVEPASAWTPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...GGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CTAGCTGAGGATGATTCATTCTTCTCTGGTAGCAGCAATAGCGATTTCATACTTGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: LAEDDSFFSGSSNSDFILAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...AAGTATGAAATCGCTATTGCTGCTACCAGAGAAGAATGAATCATCCTCAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTAGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: AYTSRYFELHHQEQQHELAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...TAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 2 (lower is better)
Translates to: VTSLIRLSFGWCLKVPHKCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...TTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACATACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 2 (lower is better)
Translates to: RRSLPDFALPNPLWVIITYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR TCA 90 bp CTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 2 (lower is better)
Translates to: LHREVVSHFDTRWCSPMPTFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...AGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTGCCCATGATTGCGCAACAGTAGCACACTaGTGCAATGGAGAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PMPYAGAIIPLPSGAHDCATVAH*CNGEGR
Trigger: TCTGCCTTCTCCATTGCATCAGTGTGCTACTGTTGC...GCAATCATGGGCACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR GCA 90 bp AACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 2 (lower is better)
Translates to: NSKDITQSINQLEGAFQTDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...AGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp ACAGAAGGTATGTCGCCCTTAATAGAAGCAATATGGAGCAAAGTCTCTCCTCTAGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: TEGMSPLIEAIWSKVSPLEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...TAGAGGAGAGACTTTGCTCCATATTGCTTCTATTAAGGGCGACATACCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR GCA 90 bp CCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATTACATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 2 (lower is better)
Translates to: PTAYKYKRSIPTLPSVHYIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...GTAATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR GCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 2 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACCCAAGATCATGTCACTaGACTCCAGCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNPRSCH*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCAGTGACATGATCTTGG...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR CCA 90 bp AAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 2 (lower is better)
Translates to: KGHHTVYKPARRSLPDFASHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...GGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 2 (lower is better)
Translates to: LIRIGSRMVCDCIDGLSHESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...GTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 2 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp GCCCATTCTTGGCTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTCAATGGTATATTTTCTaGGGGCACCGTTTGCTTAAC +
Preference number: 2 (lower is better)
Translates to: AHSWLHREVVSHFDTRWCQWYIF*GHRLLN
Trigger: GTTAAGCAAACGGTGCCCTCAGAAAATATACCATTG...ACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAGCCAAGAATGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR TCA 90 bp CATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 2 (lower is better)
Translates to: HPSNSFGNSCSLLSLLLRHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...ACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp TCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 2 (lower is better)
Translates to: STEDLAPTCSDELNKVVLPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...AAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 2 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGAAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 2 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp AGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 2 (lower is better)
Translates to: SNSKDITQSINQLEGAFQESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...CTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp ATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 2 (lower is better)
Translates to: IKQLWQQLFSVEPASAWTFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...GGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 2 (lower is better)
Translates to: NSCSLLSLLLRGPSGISYPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...GTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp ATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTTCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 2 (lower is better)
Translates to: ITASSLSIFCCSEDSPLPSGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...AGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTAGCTGAGGATGATTCATTCTTCTCTGGTAGCAGCAATAGCGATTTCATACTTTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 2 (lower is better)
Translates to: LAEDDSFFSGSSNSDFILFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...AAGTATGAAATCGCTATTGCTGCTACCAGAGAAGAATGAATCATCCTCAGCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 2 (lower is better)
Translates to: LIRIGSRMVCDCIDGLSHTNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...GTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 2 (lower is better)
Translates to: QIEVASIKQLWQQLFSVESGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...CTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp CTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: LHREVVSHFDTRWCSPMPKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...AGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR CCA 90 bp GTCAAGAGGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 2 (lower is better)
Translates to: VKRKQLKGHHTVYKPARRKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...CCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCCTCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
3UTR-3UTR CCA 90 bp ATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 2 (lower is better)
Translates to: ITASSLSIFCCSEDSPLPKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...AGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR CCA 90 bp GCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 2 (lower is better)
Translates to: ASSLSIFCCSEDSPLPISLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...ACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CGGTGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 2 (lower is better)
Translates to: RWCSPMPYAGAIIPLPSGTNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...ACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCATTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
3UTR-3UTR TCA 90 bp AAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: KDITQSINQLEGAFQTLPTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...GGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 2 (lower is better)
Translates to: QIEVASIKQLWQQLFSVEESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...CTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp ACTACTTCATTCCTGCTCTTAGTGTCTGGAGACTCTATTTGCTCAGCCAATGGTGAGATAACAGATGGTTaGCTACAGAAGGATACCAGC +
Preference number: 2 (lower is better)
Translates to: TTSFLLLVSGDSICSANGEITDG*LQKDTS
Trigger: GCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTC...ACCATTGGCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGGAATGAAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR CCA 90 bp GCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 2 (lower is better)
Translates to: ASSLSIFCCSEDSPLPISHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...ACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp ACACAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 2 (lower is better)
Translates to: TQIFIDDILCAEALIRIGLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...CCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR CAA 90 bp AATCCAGCATCCATTGAGAATCCCAAGCATACACTTCAAGGTACTTaGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTC +
Preference number: 2 (lower is better)
Translates to: NPASIENPKHTLQGT*NCITRNNNMSYCTV
Trigger: GACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTCAATGGATGCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTATTGTCGATTCATGAATaGGAGCACCCAGAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: RMKCGTNALLVVESVSELLSIHE*EHPEQS
Trigger: ACTCTGCTCTGGGTGCTCTCATTCATGAATCGACAA...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR-3UTR TCA 90 bp GAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAACCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 2 (lower is better)
Translates to: ELNKVVLWMVFEGSPQIEPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...TTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp CCACTGGTGCTCAGAATGCTGGTTCTACATCTCTTAGAAATGGGACTGGAAAGTACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: PLVLRMLVLHLLEMGLESTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...ACTTTCCAGTCCCATTTCTAAGAGATGTAGAACCAGCATTCTGAGCACCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR TCA 90 bp AGTCTCTCCTCTATGATTTCTTTTCACAGCCATATTGGGCAACAGCTTCATTGCCTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTA +
Preference number: 2 (lower is better)
Translates to: SLSSMISFHSHIGQQLHCLESLL*WPRFPL
Trigger: TAATGGAAAACGTGGCCATCACAATAGACTTTCCAG...GCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR TCA 90 bp ACACAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 2 (lower is better)
Translates to: TQIFIDDILCAEALIRIGPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...CCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 2 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTACATGAGGAACCAAACTaGCAAGTCTCTCAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: RMKCGTNALLVVESVSELHEEPN*QVSQCL
Trigger: GAGACACTGAGAGACTTGCCAGTTTGGTTCCTCATG...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR-3UTR CCA 90 bp GTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAAAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: VTSLIRLSFGWCLKVPHKNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...TTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 2 (lower is better)
Translates to: QIEVASIKQLWQQLFSVEHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...CTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCCAAATAAAGGACACTaGCCAAAGATCATGTGCTCA +
Preference number: 2 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQPNKGH*PKIMCS
Trigger: TGAGCACATGATCTTTGGCCAGTGTCCTTTATTTGG...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR TCA 90 bp ACTTTCATCATCTGTATAATCGACAGGCCGCAGACCAAATATATTAACAGCATTACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 2 (lower is better)
Translates to: TFIICIIDRPQTKYINSITFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...AATGCTGTTAATATATTTGGTCTGCGGCCTGTCGATTATACAGATGATGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR GCA 90 bp AGCAATATGGAGCAAAGTCTCTCCTCTATGATTTCTTTTCACAGCCATATTGGGTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: SNMEQSLSSMISFHSHIGSGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...CCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACTTTGCTCCATATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CAA 90 bp GATGGTTGGCTACAGAAGGATACCAGCTTTTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCTTCTTTTTCTGCCTCTAAATTCCAT +
Preference number: 2 (lower is better)
Translates to: DGWLQKDTSFCLDSS*ESNSPSSFSASKFH
Trigger: ATGGAATTTAGAGGCAGAAAAAGAAGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTTCTGTAGCCAACCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CAA 90 bp GACATGTTACTGTTTTTCCTCCCTGATGTACCACCAACTTTACGTTaGCATGAAGGTGGTGAAGAACATTCAGGCAATGGTATATTTTCT +
Preference number: 2 (lower is better)
Translates to: DMLLFFLPDVPPTLR*HEGGEEHSGNGIFS
Trigger: AGAAAATATACCATTGCCTGAATGTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGTAACATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR TCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTATTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: RMKCGTNALLVVESVSELLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR-3UTR GCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAGTAATCACCAACTTCTaGCTCCATGCCAACCTAAAA +
Preference number: 2 (lower is better)
Translates to: RMKCGTNALLVVESVSELVITNF*LHANLK
Trigger: TTTTAGGTTGGCATGGAGGCAGAAGTTGGTGATTAC...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR-3UTR GCA 90 bp AGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTACAAGAGGTCCATACTCTGGAGAGCTATaGAACAATGTTATAACAGTA +
Preference number: 2 (lower is better)
Translates to: SIFCCSEDSPLPISTRGPYSGEL*NNVITV
Trigger: TACTGTTATAACATTGTTGCATAGCTCTCCAGAGTA...TGGACCTCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR-3UTR CCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTCACTGGTGGCAGGTATaGAGAATATTAAAAGACTCA +
Preference number: 2 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSHWWQV*RILKDS
Trigger: TGAGTCTTTTAATATTCTCCATACCTGCCACCAGTG...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 2 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
3UTR-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 2 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
3UTR-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
3UTR-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 2 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
3UTR-3UTR CCA 90 bp ACTTTCATCATCTGTATAATCGACAGGCCGCAGACCAAATATATTAACAGCATTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: TFIICIIDRPQTKYINSINKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...AATGCTGTTAATATATTTGGTCTGCGGCCTGTCGATTATACAGATGATGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFETNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
3UTR CCA 72 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACC +
Preference number: 3 (lower is better)
Translates to: CDCIDGLSHVTV*LGLSTEDLAPT
Trigger: GGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR TCA 72 bp TCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGCTTGGGCTTTCTACTG +
Preference number: 3 (lower is better)
Translates to: SGLAWYATVLMV*VTSLSGLGFLL
Trigger: CAGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR TCA 72 bp GATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCACTGTCTGGCTTGGGCT +
Preference number: 3 (lower is better)
Translates to: DQNRVSHGMRLY*WSESRHCLAWA
Trigger: AGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR GCA 72 bp TGGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAGGTTGTCCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: WLGLSTEDLAPT*SDELNKVVLWM
Trigger: CATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR GCA 72 bp GCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTGAGTCACGTCACTGTC +
Preference number: 3 (lower is better)
Translates to: AEALIRIGSRMV*DCIDGLSHVTV
Trigger: GACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR GCA 72 bp CCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAGCAGTGGCTAGCTGAG +
Preference number: 3 (lower is better)
Translates to: PLPISTRGPSLR*PVFITEQWLAE
Trigger: CTCAGCTAGCCACTGCTCAGTAATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp GATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 3 (lower is better)
Translates to: DILCAEALIRIGSRMVCDTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp GACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 3 (lower is better)
Translates to: DITQSINQLEGAFQTLPCTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGACTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCAC +
Preference number: 3 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGLSRSH*LVSLFH
Trigger: GTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAG...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR CAA 90 bp AACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 3 (lower is better)
Translates to: NSCSLLSLLLRGPSGISYNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...GTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR TCA 72 bp ATCCACATGCCCATTCTTGGCTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGTGGTGTTCACCAATGC +
Preference number: 3 (lower is better)
Translates to: IHMPILGCIVKW*VILIPGGVHQC
Trigger: GCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAGCCAAGAATGGGCATGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp TCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTACAAGAACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 3 (lower is better)
Translates to: SLSIFCCSEDSPLPISTRTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...TCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR TCA 72 bp ATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGACCTTCAGGAATTTCAT +
Preference number: 3 (lower is better)
Translates to: IHQTALATAVLC*ACFCVDLQEFH
Trigger: ATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp GCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 3 (lower is better)
Translates to: ASSLSIFCCSEDSPLPISHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...ACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR CAA 90 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCT +
Preference number: 3 (lower is better)
Translates to: CDCIDGLSHVTVWLGLSTCLDSS*ESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCA...AGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CCA 72 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTA +
Preference number: 3 (lower is better)
Translates to: PTCSDELNKVVL*MVFEGSPQIEV
Trigger: TACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR CCA 72 bp CTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTaGTGTTCACCAATGCCTTATGCTGGAGCAATAATT +
Preference number: 3 (lower is better)
Translates to: LHREVVSHFDTR*CSPMPYAGAII
Trigger: AATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
3UTR-3UTR CAA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 3 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR GCA 72 bp TGTTTTTCCTCCCTGATGTACCACCAACTTTACGTTTaGATGAAGGTGGTGAAGAACATTCAGGCAATGGTA +
Preference number: 3 (lower is better)
Translates to: CFSSLMYHQLYV*MKVVKNIQAMV
Trigger: TACCATTGCCTGAATGTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGGTACATCAGGGAGGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR GCA 72 bp ATAACAGATGGTTGGCTACAGAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAGTCAAATTCACCATCT +
Preference number: 3 (lower is better)
Translates to: ITDGWLQKDTSF*LDSSLESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTTCTGTAGCCAACCATCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR GCA 72 bp ACTTCATTCCTGCTCTTAGTGTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAGACTTCAGTTAAACTT +
Preference number: 3 (lower is better)
Translates to: TSFLLLVSGDSI*SANGKETSVKL
Trigger: AAGTTTAACTGAAGTCTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGGAATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR-3UTR CAA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTGTGCATCTTAAGATGTaGATGAACTTCAGAGATTCT +
Preference number: 3 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSVHLKM*MNFRDS
Trigger: AGAATCTCTGAAGTTCATCAACATCTTAAGATGCAC...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR TCA 72 bp CTACATCTCTTAGAAATGGGACTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTATTTTCTAATGGCAAA +
Preference number: 3 (lower is better)
Translates to: LHLLEMGLESLL*WPRFPLFSNGK
Trigger: TTTGCCATTAGAAAATAATGGAAAACGTGGCCATCACAATAGACTTTCCAGTCCCATTTCTAAGAGATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR TCA 72 bp CTTTTACCCATTCAAATTTTAGAATCCAGCATCCATTaGGAATCCCAAGCATACACTTCAAGGTACTTTGAA +
Preference number: 3 (lower is better)
Translates to: LLPIQILESSIH*ESQAYTSRYFE
Trigger: TTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTCAATGGATGCTGGATTCTAAAATTTGAATGGGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: LCAEALIRIGSRMVCDCISAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...AATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR GCA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR CCA 90 bp CATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCT +
Preference number: 4 (lower is better)
Translates to: HHTVYKPARRSLPDFALPDHPVP*RARNEA
Trigger: AGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTC...CGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR CCA 90 bp GAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: EVASIKQLWQQLFSVEPASAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...AGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR TCA 90 bp ATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ILCAEALIRIGSRMVCDCRPAFG*KAPRRA
Trigger: CGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACG...ACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR TCA 90 bp CCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PARRSLPDFALPNPLWVITAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...TATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: QSINQLEGAFQTLPCRTLAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...GAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCT +
Preference number: 4 (lower is better)
Translates to: DILCAEALIRIGSRMVCDDHPVP*RARNEA
Trigger: AGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTC...GTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR TCA 90 bp GATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: DDILCAEALIRIGSRMVCRPAFG*KAPRRA
Trigger: CGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACG...GCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR TCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTTATGCTGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: REVVSHFDTRWCSPMPYAERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...AGCATAAGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000620057.4
CDS-3UTR GCA 90 bp CAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSINQLEGAFQTLPCRTLEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...GAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: YTVCRSADQNRVSHGMRLAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...CAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGGCAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWAAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGC...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS-3UTR TCA 90 bp CCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAGCAACAGTAGCACACTaGTGCAATGGAGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PARRSLPDFALPNPLWVIATVAH*CNGEGR
Trigger: TCTGCCTTCTCCATTGCATCAGTGTGCTACTGTTGC...TATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAAACCACAGGGAAGCTaGAGGCCAGCGACTCGAAAC +
Preference number: 4 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRKPQGS*RPATRN
Trigger: GTTTCGAGTCGCTGGCCTGCAGCTTCCCTGTGGTTT...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000613192.2
CDS-3UTR GCA 90 bp ACTGTCTGGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVWLGLSTEDLAPTCSDEGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...CTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: PQIEVASIKQLWQQLFSVSAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...AACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
CDS-3UTR CCA 90 bp CTGTCTGGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: LSGLGFLLRIWPPPAVTSESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...GCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: QLWQQLFSVEPASAWTFRDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGCCAAGATCATGTCACTaGACTCCAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TEDLAPTCSDELNKVVLWPRSCH*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCAGTGACATGATCTTGG...CCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: QSINQLEGAFQTLPCRTLSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...GAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: YTVCRSADQNRVSHGMRLTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...CAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: YTVCRSADQNRVSHGMRLCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...CAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: FLLRIWPPPAVTSLIRLSCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...GGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCAGGCAGAGGTTGCAGTaGGCCAAGATCATGTCACTG +
Preference number: 4 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTRQRLQ*AKIMSL
Trigger: CAGTGACATGATCTTGGCTCACTGCAACCTCTGCCT...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp ATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCAAACCACAGGGAAGCTaGAGGCCAGCGACTCGAAAC +
Preference number: 4 (lower is better)
Translates to: IGSRMVCDCIDGLSHVTVKPQGS*RPATRN
Trigger: GTTTCGAGTCGCTGGCCTGCAGCTTCCCTGTGGTTT...GACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000613192.2
CDS-3UTR GCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp GCAAAGTCTCTCCTCTATGATTTCTTTTCACAGCCATATTGGGCAACAGCTTCAGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: AKSLLYDFFSQPYWATASERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...TGAAGCTGTTGCCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR GCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTATAGCTTCCCTCTGCTaGCAGCCTCCAGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LCAEALIRIGSRMVCDCIIASLC*QPPAKV
Trigger: TACCTTCGCTGGAGGCTGGCAGCAGAGGGAAGCTAT...AATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSSAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFISAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR CCA 90 bp ACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TEDLAPTCSDELNKVVLWPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...CCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LAPTCSDELNKVVLWMVFFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...AAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ACTGTCTGGCTTGGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TVWLGLSTEDLAPTCSDELESLL*WPRFPL
Trigger: TAATGGAAAACGTGGCCATCACAATAGACTTTCCAG...CTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGCCAGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATACCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PARRSLPDFALPNPLWVIPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...TATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: CDCIDGLSHVTVWLGLSTTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...AGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACTTTTCTTCCTGGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SVEPASAWTFRNFILFFLAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...CAGGAAGAAAAGTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: ALIRIGSRMVCDCIDGLSDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...ACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: IKQLWQQLFSVEPASAWTDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...GGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: SFGNSCSLLSLLLRGPSGGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...TCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSNSKDITQSINQLEGAFEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...GAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCAAAATAGCTTCCCTCTaGTGCCAGCCTCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: IGSRMVCDCIDGLSHVTVKIASL*CQPPAK
Trigger: CTTCGCTGGAGGCTGGCAGCAGAGGGAAGCTATTTT...GACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMSAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR CCA 90 bp CAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATCGGGGTGTAACACACTaGACATCCAGTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: QPTAYKYKRSIPTLPSVHRGVTH*TSSSNA
Trigger: TGCATTGGAACTGGATGTCCAGTGTGTTACACCCCG...ATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: GLSTEDLAPTCSDELNKVASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...AACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EALIRIGSRMVCDCIDGLPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...CAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATTACCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PTAYKYKRSIPTLPSVHYPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...GTAATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: QLWQQLFSVEPASAWTFREPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...CCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GGGCTTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: GLSTEDLAPTCSDELNKVSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...AACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GACAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCACTGTTTTTCCTCCCTaGTGTACCACCAACTTTACG +
Preference number: 4 (lower is better)
Translates to: DSPLPISTRGPSLRCPVFTVFPP*CTTNFT
Trigger: CGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGT...GAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: SSKEPSRLCPAEPSLGDNESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...ATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: DITQSINQLEGAFQTLPCGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...GCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATATGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: QQLFSVEPASAWTFRNFICVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR GCA 90 bp CTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: LHREVVSHFDTRWCSPMPDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...AGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp TTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLLRIWPPPAVTSLIRLSGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...GGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp TCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACTTTTCTTCCTGGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SVEPASAWTFRNFILFFLEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...CAGGAAGAAAAGTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCA +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFESAARL*AQAPRP
Trigger: TGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR CCA 90 bp CCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: PAVTSLIRLSFGWCLKVPFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...GGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp TTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: FLLRIWPPPAVTSLIRLSSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...GGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFRPAFG*KAPRRA
Trigger: CGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIRPAFG*KAPRRA
Trigger: CGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
CDS-3UTR TCA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPCIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: HHTVYKPARRSLPDFALPHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...CGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCACTTCAAGGTACTTTaGACTGCATCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWHFKVL*TASPGT
Trigger: TGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTG...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGACACTTCAAGGTACTTTaGACTGCATCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SFGNSCSLLSLLLRGPSGHFKVL*TASPGT
Trigger: TGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTG...TCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KDITQSINQLEGAFQTLPTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...GGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACTGCCGGTTCCTCGGCTaGCGATTATCCGGCATCGTC +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYCRFLG*RLSGIV
Trigger: GACGATGCCGGATAATCGGCAGCCGAGGAACCGGCA...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACATCTGAGGGCACCGTTTaGTTAACAAAATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: RRSLPDFALPNPLWVIITSEGTV*LTKSPL
Trigger: CAGTGGAGATTTTGTTAAGCAAACGGTGCCCTCAGA...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: PTCSDELNKVVLWMVFEGGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...ACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELDHPVP*RARNEA
Trigger: AGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTC...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGACTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: SFGNSCSLLSLLLRGPSGLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...TCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACAAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: RRSLPDFALPNPLWVIITKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMRPAFG*KAPRRA
Trigger: CGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
CDS-3UTR TCA 90 bp ATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCACTGTTTTTCCTCCCTaGTGTACCACCAACTTTACG +
Preference number: 4 (lower is better)
Translates to: IGSRMVCDCIDGLSHVTVTVFPP*CTTNFT
Trigger: CGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGT...GACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: LAPTCSDELNKVVLWMVFPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: KGHHTVYKPARRSLPDFAGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...GGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFERILG*RFLGCR
Trigger: TCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR GCA 90 bp ATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: ILCAEALIRIGSRMVCDCIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...ACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp TCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTCTGAGGGCACCGTTTaGTTAACAAAATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: STEDLAPTCSDELNKVVLSEGTV*LTKSPL
Trigger: CAGTGGAGATTTTGTTAAGCAAACGGTGCCCTCAGA...AAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp CATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGCACCAACTTTACGTTTaGATGAAGGTGGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HHTVYKPARRSLPDFALPHQLYV*MKVVKN
Trigger: GTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTG...CGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp TCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACTTTTCTTCCTGGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: SVEPASAWTFRNFILFFLGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...CAGGAAGAAAAGTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: SNSKDITQSINQLEGAFQGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...CTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432456.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MVFEGSPQIEVASIKQLWEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...CCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMDHPVP*RARNEA
Trigger: AGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR CCA 90 bp GAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTCGGGGTGTAACACACTaGACATCCAGTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: EVASIKQLWQQLFSVEPARGVTH*TSSSNA
Trigger: TGCATTGGAACTGGATGTCCAGTGTGTTACACCCCG...AGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTGAGATAACAGATGGTTaGCTACAGAAGGATACCAGC +
Preference number: 4 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPEITDG*LQKDTS
Trigger: GCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTC...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SNSKDITQSINQLEGAFQASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...CTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PAVTSLIRLSFGWCLKVPASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...GGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: EVASIKQLWQQLFSVEPASHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...AGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: VCDCIDGLSHVTVWLGLSESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: DDILCAEALIRIGSRMVCESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...GCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR CAA 72 bp CATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCA +
Preference number: 4 (lower is better)
Translates to: HPSNSFGNSCSL*SLLLRGPSGIS
Trigger: TGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATCTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TVCRSADQNRVSHGMRLYLESLL*WPRFPL
Trigger: TAATGGAAAACGTGGCCATCACAATAGACTTTCCAG...ATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: NSKDITQSINQLEGAFQTSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...AGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: SNSKDITQSINQLEGAFQCIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...CTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILCAEALIRIGSRMVCDCRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...ACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp ATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ILCAEALIRIGSRMVCDCPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...ACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: CDCIDGLSHVTVWLGLSTPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMICVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp TTTCTACTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: FLLRIWPPPAVTSLIRLSLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...GGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
CDS-3UTR GCA 90 bp GACAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: DSPLPISTRGPSLRCPVFSLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...GAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFDHPVP*RARNEA
Trigger: AGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
CDS-3UTR CCA 90 bp ATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTTTCACAGCCATATTaGGCAACAGCTTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: IKQLWQQLFSVEPASAWTFSQPY*ATASLL
Trigger: CAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAA...GGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 4 (lower is better)
Translates to: DITQSINQLEGAFQTLPCHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...GCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp TGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTGCCGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: WCSPMPYAGAIIPLPSGAEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...GGCACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSRMVCDCIDGLSHVTVWNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...CCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: PTCSDELNKVVLWMVFEGESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...ACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: CDCIDGLSHVTVWLGLSTLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...AGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: PPPAVTSLIRLSFGWCLKLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...CTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTTCACCAATGCCTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: LHREVVSHFDTRWCSPMPLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...AGGCATTGGTGAACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGGGAGTTCTGGGGAACTaGTCTCAGGTAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQGVLGN*SQVVCP
Trigger: AGGGCAGACTACCTGAGACCAGTTCCCCAGAACTCC...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR TCA 90 bp GATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: DILCAEALIRIGSRMVCDSLLQS*IMLSSC
Trigger: ACAACTGGACAGCATGATTCAACTTTGTAGTAAGCT...GTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATTACTTACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLPISTRGPSLRCPVFITYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...AGTAATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACAGGCTGGGTTTGCACTaGAGCTTTACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: NSCSLLSLLLRGPSGISYRLGLH*SFTHNI
Trigger: TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCT...GTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACAATTTCACCATTTATCTaGGGACTGGAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: RRSLPDFALPNPLWVIITISPFI*GLEITD
Trigger: ATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAAT...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGAGGTGGTGTACCTGGTaGAAGACTAATGAATTCATC +
Preference number: 4 (lower is better)
Translates to: PPPAVTSLIRLSFGWCLKRWCTW*KTNEFI
Trigger: GATGAATTCATTAGTCTTTCACCAGGTACACCACCT...CTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCATTACTAGGTGGTGTACCTGGTaGAAGACTAATGAATTCATC +
Preference number: 4 (lower is better)
Translates to: PLPISTRGPSLRCPVFITRWCTW*KTNEFI
Trigger: GATGAATTCATTAGTCTTTCACCAGGTACACCACCT...AGTAATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: GSNSKDITQSINQLEGAFHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...GAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SDELNKVVLWMVFEGSPQTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...TTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: PTNRSSIHQTALATAVLCGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGAACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: VCDCIDGLSHVTVWLGLSLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432456.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CTGAGGATCTGGCCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATTTTACTGCTCATCGTaGTCATCTTTCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: LRIWPPPAVTSLIRLSFGFYCSS*SSFRIK
Trigger: CTTGATTCTGAAAGATGATCACGATGAGCAGTAAAA...TCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS-3UTR GCA 90 bp TGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACTCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: CDCIDGLSHVTVWLGLSTQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...AGTAGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp TCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGTGGTCTCAGGTAGTCTaGCCTCCCACTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SKDITQSINQLEGAFQTLWSQVV*PPTLLF
Trigger: AAAAAGAAGAGTGGGAGGGCAGACTACCTGAGACCA...CAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCACCTGCTCTTAGTGTCTaGAGACTCTATTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPPALSV*RLYLLS
Trigger: GCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGG...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp TATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: YTVCRSADQNRVSHGMRLNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...CAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AGAATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGAGCGAAGGTAGACTGTaGCAAAGGAGTTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RITASSLSIFCCSEDSPLSEGRL*QRSSGE
Trigger: TTCCCCAGAACTCCTTTGCCACAGTCTACCTTCGCT...CAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR TCA 90 bp AACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTAGGCTGGGTTTGCACTaGAGCTTTACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: NSKDITQSINQLEGAFQTRLGLH*SFTHNI
Trigger: TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCT...AGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR TCA 90 bp ATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCATTTCACCATTTATCTaGGGACTGGAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: IGSRMVCDCIDGLSHVTVISPFI*GLEITD
Trigger: ATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAAT...GACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGAGACCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGCTTGGGCTTTCTACTaGGGATCTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFAWAFY*GSGPHL
Trigger: CAGGTGGGGGCCAGATCCTCAGTAGAAAGCCCAAGC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QIFIDDILCAEALIRIGSTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...AGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp CAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: QGTLNCITRNNNMSYCTVGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...GACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DITQSINQLEGAFQTLPCTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...GCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTGATGGTCTGACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: EALIRIGSRMVCDCIDGLTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...CAGACCATCAATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGACATCCAGTTCCAATaGAGTCACTTACACAATTAC +
Preference number: 4 (lower is better)
Translates to: HPSNSFGNSCSLLSLLLRDIQFQ*SHLHNY
Trigger: GTAATTGTGTAAGTGACTGCATTGGAACTGGATGTC...ACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTCAAAATCTCCACTGGTaGTCAGAATGCTGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: ITASSLSIFCCSEDSPLPQNLHW*SECWFY
Trigger: GTAGAACCAGCATTCTGAGCACCAGTGGAGATTTTG...AGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp GTCAAGAGGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGCAAAATCTCCACTGGTaGTCAGAATGCTGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: VKRKQLKGHHTVYKPARRQNLHW*SECWFY
Trigger: GTAGAACCAGCATTCTGAGCACCAGTGGAGATTTTG...CCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCCTCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp GTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: VCDCIDGLSHVTVWLGLSFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: QQLFSVEPASAWTFRNFIQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACCCTGCTCTTAGTGTCTaGAGACTCTATTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNPALSV*RLYLLS
Trigger: GCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGG...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp CAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATAACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 4 (lower is better)
Translates to: QQLFSVEPASAWTFRNFITNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTGCCCATGATTGCCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PMPYAGAIIPLPSGAHDCHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...GCAATCATGGGCACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VCDCIDGLSHVTVWLGLSNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp CCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: PQIEVASIKQLWQQLFSVSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...AACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCAGCTTTGGCAACTTCTaGATTTTACTGCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSNSKDITQSINQLEGAFSFGNF*ILLLIV
Trigger: CACGATGAGCAGTAAAATCCAGAAGTTGCCAAAGCT...GAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS-3UTR TCA 90 bp AATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: NPKHTLQGTLNCITRNNNTFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTACAAGAGGTCCACACTTCAAGGTACTTTaGACTGCATCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SIFCCSEDSPLPISTRGPHFKVL*TASPGT
Trigger: TGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTG...TGGACCTCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ACCTTCTCAGGAGTCACTACTTCATTCCTGCTCTTAGTGTCTGGAGACTCTATTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: TFSGVTTSFLLLVSGDSIPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AATAGAGTCTCCAGACACTAAGAGCAGGAATGAAGTAGTGACTCCTGAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CCCCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPPAVTSLIRLSFGWCLKTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...CTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCTTGTCGATTCATGAATaGGAGCACCCAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMILSIHE*EHPEQS
Trigger: ACTCTGCTCTGGGTGCTCTCATTCATGAATCGACAA...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCCTCACCAAGTCATGTTaGGCCTCATTCAACAGCACA +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMILTKSC*ASFNST
Trigger: TGTGCTGTTGAATGAGGCTCAACATGACTTGGTGAG...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAAACCACAGGGAAGCTaGAGGCCAGCGACTCGAAAC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMKPQGS*RPATRN
Trigger: GTTTCGAGTCGCTGGCCTGCAGCTTCCCTGTGGTTT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260947.9
ENST00000613706.5
CDS-3UTR GCA 90 bp TACCCGGTGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: YPVVFTNALCWSNNSTTFKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...GAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp TGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAGGTGCCAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: WCSPMPYAGAIIPLPSGAKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...GGCACCTGAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCATCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPSGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp GTCAAGAGGAAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGCACCAACTTTACGTTTaGATGAAGGTGGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VKRKQLKGHHTVYKPARRHQLYV*MKVVKN
Trigger: GTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTG...CCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTTCCTCTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp CAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCTCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: QGTLNCITRNNNMSYCTVSGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...GACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: PTCSDELNKVVLWMVFEGFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...ACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GAGAATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACTTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: ENPKHTLQGTLNCITRNNLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...GTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp CATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: HPSNSFGNSCSLLSLLLRSLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...ACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAGCCTTCCAGACTTTaGCCTGCCGAACCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFEPSRL*PAEPSL
Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTTCTCAGGTGGTATCCTaGCCACTCACTAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSSQVVS*PLTKAL
Trigger: CAAGGCCTTAGTGAGTGGGCAGGATACCACCTGAGA...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp ATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGAGATAACAGATGGTTaGCTACAGAAGGATACCAGC +
Preference number: 4 (lower is better)
Translates to: IEVASIKQLWQQLFSVEPEITDG*LQKDTS
Trigger: GCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTC...AGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCCCTGCTCTTAGTGTCTaGAGACTCTATTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIPALSV*RLYLLS
Trigger: GCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGG...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PTCSDELNKVVLWMVFEGNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...ACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp TCCCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: SPQIEVASIKQLWQQLFSLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...AGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
3UTR CAA 72 bp CTGTTTTTCCTCCCTGATGTACCACCAACTTTACGTTaGCATGAAGGTGGTGAAGAACATTCAGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: LFFLPDVPPTLR*HEGGEEHSGNG
Trigger: ACCATTGCCTGAATGTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR TCA 90 bp CCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PTNRSSIHQTALATAVLCYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTACACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: HTLQGTLNCITRNNNMSYTFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...GTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GTCTATTTCACCATTTATCTGAGGACTGGAGATAACAGATGGTTGGCTACAGAATGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: VYFTIYLRTGDNRWLATECIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...TTCTGTAGCCAACCATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR TCA 90 bp CCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PTNRSSIHQTALATAVLCPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTACAAGAGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: SLSIFCCSEDSPLPISTRESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...TCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTACAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFTAVLC*ACFCVD
Trigger: GTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp CAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: QIFIDDILCAEALIRIGSPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTGTGTGCAGAAGCGCTaGTCAGAATCGGGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFCVQKR*SESGLA
Trigger: TGCGAGACCCGATTCTGATCAGCGCTTCTGCACACA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGACCCCTTCCAGTTTTaGACTTTCTGTGTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PQIEVASIKQLWQQLFSVDPFQF*TFCVLC
Trigger: ACACAAGACACAGAAAGTTCAAAACTGGAAGGGGTC...AACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAAACCACAGGGAAGCTaGAGGCCAGCGACTCGAAAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEKPQGS*RPATRN
Trigger: GTTTCGAGTCGCTGGCCTGCAGCTTCCCTGTGGTTT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260947.9
ENST00000613706.5
CDS-3UTR GCA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTTTACTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVLLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGTAA...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp GAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAATCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: ELNKVVLWMVFEGSPQIESGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...TTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp TCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGCCTATAAGTACAAGATTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: SLSIFCCSEDSPLPISTRLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...TCTTGTACTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGGTCCATCCCTACGCTaGCCAGTGTTCATTACTGAG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMGPSLR*PVFITE
Trigger: CTCAGTAATGAACACTGGGCAGCGTAGGGATGGACC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCGGGGTGTAACACACTaGACATCCAGTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIRGVTH*TSSSNA
Trigger: TGCATTGGAACTGGATGTCCAGTGTGTTACACCCCG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCCACATGCCCATTCTTaGCTGCATCGTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMPHAHS*LHREVV
Trigger: CACCACTTCACGATGCAGCCAAGAATGGGCATGTGG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: VTSLIRLSFGWCLKVPHKFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...TTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp CCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: PTNRSSIHQTALATAVLCFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTTCTACTGAGGATCTaGCCCCCACCTGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFFLLRI*PPPAVT
Trigger: CGTCACTGCAGGTGGGGGCCAGATCCTCAGTAGAAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFISHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp CAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGAGCACACTGATGCAATaGAGAAGGCAGATGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QIEVASIKQLWQQLFSVESTLMQ*RRQMRN
Trigger: ATTCCTCATCTGCCTTCTCCATTGCATCAGTGTGCT...CTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR TCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTAGGCTGGGTTTGCACTaGAGCTTTACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSRLGLH*SFTHNI
Trigger: TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCT...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFTFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFCIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCTGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFICIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LWMVFEGSPQIEVASIKQRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...CTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRTVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCATCCTTGTCGATTCATaGATGAGAGCACCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIILVDS*MRAPRA
Trigger: TGCTCTGGGTGCTCTCATTCATGAATCGACAAGGAT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp CAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QIEVASIKQLWQQLFSVESGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...CTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR GCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCCACCAACTTTACGTTTaGATGAAGGTGGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIHQLYV*MKVVKN
Trigger: GTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTG...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCTCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFISGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp GAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: EGSPQIEVASIKQLWQQLSLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...CAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp ATGGTGTTTGAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: MVFEGSPQIEVASIKQLWQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...CCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTCAAACACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGATCTGGCCCCCACCTaGAGTGACGAGCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEDLAPT*SDELNK
Trigger: CTTATTAAGCTCGTCACTGCAGGTGGGGGCCAGATC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAATTACTGCAAGCTCACTGAGCATTTTCTGTTGTTCTGAAGACAGCCCACTGAATCTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: RITASSLSIFCCSEDSPLNLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGATT...CAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCGGGGTGTAACACACTaGACATCCAGTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMRGVTH*TSSSNA
Trigger: TGCATTGGAACTGGATGTCCAGTGTGTTACACCCCG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCCTGCTCTTAGTGTCTaGAGACTCTATTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIPALSV*RLYLLS
Trigger: GCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGCAAGCTTCATGCAATaGTGTCCATCCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMASFMQ*CPSSMV
Trigger: GACCATGCTGGATGGACACCATTGCATGAAGCTTGC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp CAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 4 (lower is better)
Translates to: QIFIDDILCAEALIRIGSHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...AGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAAGTCACGTCACTGTCTaGCTTGGGCTTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRSHVTV*LGLSTE
Trigger: CTCAGTAGAAAGCCCAAGCCAGACAGTGACGTGACT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp TTGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTCAGTAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: LNCITRNNNMSYCTVKLSKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...ACTGAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp AAGCAACTCAAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCATCCATCAAACAGCTTTaGCAACTTCTGGATTTTACT +
Preference number: 4 (lower is better)
Translates to: KQLKGHHTVYKPARRSLPSIKQL*QLLDFT
Trigger: AGTAAAATCCAGAAGTTGCCAAAGCTGTTTGATGGA...TGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTTGAGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432456.5
3UTR CAA 72 bp TTCACCATTTATCTGAGGACTGGAGATAACAGATGGTaGGCTACAGAAGGATACCAGCTTTTGCTTAGATTC +
Preference number: 4 (lower is better)
Translates to: FTIYLRTGDNRW*ATEGYQLLLRF
Trigger: GAATCTAAGCAAAAGCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCCAGTCCTCAGATAAATGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
3UTR CAA 72 bp TCCATTGAGAATCCCAAGCATACACTTCAAGGTACTTaGAACTGCATCACCAGGAACAACAACATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SIENPKHTLQGT*NCITRNNNMSY
Trigger: GTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTCTCAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAGGCTGGGTTTGCACTaGAGCTTTACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIRLGLH*SFTHNI
Trigger: TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAGGCTGGGTTTGCACTaGAGCTTTACTCACAACATA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFRLGLH*SFTHNI
Trigger: TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGCAATATGGAGCAAAGTCTCTCCTCTATGATTTCTTTTCACAGCCATATTGGGCAATGGTATATTTTCTaGGGGCACCGTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: SNMEQSLSSMISFHSHIGQWYIF*GHRLLN
Trigger: GTTAAGCAAACGGTGCCCTCAGAAAATATACCATTG...CCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACTTTGCTCCATATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACTGTTTTTCCTCCCTaGTGTACCACCAACTTTACG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFTVFPP*CTTNFT
Trigger: CGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGTGGTGAGTCATTTTaGTACCCGGTGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSGESF*YPVVFT
Trigger: GGTGAACACCACCGGGTATCAAAATGACTCACCACT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp GAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: ELNKVVLWMVFEGSPQIERKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...TTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CATGCTTTTACCCATTCAAATTTTAGAATCCAGCATCCATTGAGAATCCCAAGCCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: HAFTHSNFRIQHPLRIPSHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...GCTTGGGATTCTCAATGGATGCTGGATTCTAAAATTTGAATGGGTAAAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCACTTCAAGGTACTTTaGACTGCATCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFHFKVL*TASPGT
Trigger: TGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCACTTCAAGGTACTTTaGACTGCATCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIHFKVL*TASPGT
Trigger: TGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAACTGTATTGATGGTCTaGGTCACGTCACTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFETVLMV*VTSLSG
Trigger: GCCAGACAGTGACGTGACTCAGACCATCAATACAGT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGGTATGCGACTGTATTaGTGGTCTGAGTCACGTCAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFGMRLY*WSESRH
Trigger: GTGACGTGACTCAGACCATCAATACAGTCGCATACC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTGTAATGACGTTGGACTaGCAATTTGCTAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSVMTLD*QFARLV
Trigger: GACCAGTCTAGCAAATTGTCAGTCCAACGTCATTAC...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp CAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCTTACTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: QGTLNCITRNNNMSYCTVLLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGTAA...GACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCAAAATCTCCACTGGTaGTCAGAATGCTGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIQNLHW*SECWFY
Trigger: GTAGAACCAGCATTCTGAGCACCAGTGGAGATTTTG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTATCTGAGGGCACCGTTTaGTTAACAAAATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELSEGTV*LTKSPL
Trigger: CAGTGGAGATTTTGTTAAGCAAACGGTGCCCTCAGA...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTCTGAGGGCACCGTTTaGTTAACAAAATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFSEGTV*LTKSPL
Trigger: CAGTGGAGATTTTGTTAAGCAAACGGTGCCCTCAGA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: NPKHTLQGTLNCITRNNNFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGGGTCTCGCATGGTATaGGACTGTATTGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFGSRMV*DCIDGL
Trigger: CAGACCATCAATACAGTCGCATACCATGCGAGACCC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp TTTGAACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTCAGACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 4 (lower is better)
Translates to: FELHHQEQQHELLYCQTQTNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...CTGAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp CAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QIFIDDILCAEALIRIGSNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...AGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFILPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACCACTGGTGGCAGGTATaGAGAATATTAAAAGACTCA +
Preference number: 4 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYHWWQV*RILKDS
Trigger: TGAGTCTTTTAATATTCTCCATACCTGCCACCAGTG...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp GCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACATGAGTTACCAAATAAAGGACACTaGCCAAAGATCATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AYTSRYFELHHQEQQHELPNKGH*PKIMCS
Trigger: TGAGCACATGATCTTTGGCCAGTGTCCTTTATTTGG...TAACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR TCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTATACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTCAATGGTATATTTTCTaGGGGCACCGTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSQWYIF*GHRLLN
Trigger: GTTAAGCAAACGGTGCCCTCAGAAAATATACCATTG...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTCAGTATACAATGGTATATTTTCTaGGGGCACCGTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: NCITRNNNMSYCTVKLSIQWYIF*GHRLLN
Trigger: GTTAAGCAAACGGTGCCCTCAGAAAATATACCATTG...TATACTGAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR TCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTAGGTGGTGTACCTGGTaGAAGACTAATGAATTCATC +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSRWCTW*KTNEFI
Trigger: GATGAATTCATTAGTCTTTCACCAGGTACACCACCT...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAACCTTCAGGTGCCCATaGTTGCAAGCTTCATGCAAT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFETFRCP*LQASCN
Trigger: ATTGCATGAAGCTTGCAATCATGGGCACCTGAAGGT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATGCATCGTGAAGTGGTaGGTCATTTTGATACCCGGT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFECIVKW*VILIPG
Trigger: ACCGGGTATCAAAATGACTCACCACTTCACGATGCA...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFILKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSSGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCAAAATCTCCACTGGTaGTCAGAATGCTGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMQNLHW*SECWFY
Trigger: GTAGAACCAGCATTCTGAGCACCAGTGGAGATTTTG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp GGTATTCAACAGAAGGTATGTCGCCCTAGAAAAATGAACAAAACGGAAATTAAATCAGGTGCCCATGATTaGAAGCTTCATGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: GIQQKVCRPRKMNKTEIKSGAHD*KLHAMV
Trigger: CACCATTGCATGAAGCTTGCAATCATGGGCACCTGA...TTTAATTTCCGTTTTGTTCATTTTTCTAGGGCGACATACCTTCTGTTGAATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGTAATCACCAACTTCTaGCTCCATGCCAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIVITNF*LHANLK
Trigger: TTTTAGGTTGGCATGGAGGCAGAAGTTGGTGATTAC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACCTGCTCTTAGTGTCTaGAGACTCTATTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEPALSV*RLYLLS
Trigger: GCTGAGCAAATAGAGTCTCCAGACACTAAGAGCAGG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTTTTTCACAGCCATATTaGGCAACAGCTTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSFSQPY*ATASLL
Trigger: CAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAA...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTCAGTATATTTTCACAGCCATATTaGGCAACAGCTTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: NCITRNNNMSYCTVKLSIFSQPY*ATASLL
Trigger: CAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAA...TATACTGAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCATTTTGATACCCGGTaGTGTTCACCAATGCCTTAT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFHFDTR*CSPMPY
Trigger: ATAAGGCATTGGTGAACACCACCGGGTATCAAAATG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFEPASA*TFRNFI
Trigger: TATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGAATCGGGTCTCGCATaGTATGCGACTGTATTGATG +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEESGLA*YATVLM
Trigger: CATCAATACAGTCGCATACCATGCGAGACCCGATTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAAACAGTACAATGACTaGGCTCTCACAAACCGTGCA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMKQYND*ALTNRA
Trigger: TGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCATGAGGAACCAAACTaGCAAGTCTCTCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFHEEPN*QVSQCL
Trigger: GAGACACTGAGAGACTTGCCAGTTTGGTTCCTCATG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp GTAAGCCCTCCCCATACCTACTTCTATACTTACTGTATGGCCTTTTGTATGATCCCTCGGATTTTTGTTTaGTGCTATGGTGTTCATTTT +
Preference number: 4 (lower is better)
Translates to: VSPPHTYFYTYCMAFCMIPRIFV*CYGVHF
Trigger: AAAATGAACACCATAGCACCAAACAAAAATCCGAGG...GATCATACAAAAGGCCATACAGTAAGTATAGAAGTAGGTATGGGGAGGGCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAATAGCCATGAGAATGTaGAAAAGCTACCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRIAMRM*KSYQPL
Trigger: GAGAGGCTGGTAGCTTTTCCACATTCTCATGGCTAT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFSLLQS*IMLSSC
Trigger: ACAACTGGACAGCATGATTCAACTTTGTAGTAAGCT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACTGCATCACCAGGAACAACAACATGAGTTACTGTACTGTCAAACTCAGTATAAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NCITRNNNMSYCTVKLSISLLQS*IMLSSC
Trigger: ACAACTGGACAGCATGATTCAACTTTGTAGTAAGCT...TATACTGAGTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGGTGATGCAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMLESLL*WPRFPL
Trigger: TAATGGAAAACGTGGCCATCACAATAGACTTTCCAG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGCAATGGTATATTTTCTaGGGGCACCGTTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMQWYIF*GHRLLN
Trigger: GTTAAGCAAACGGTGCCCTCAGAAAATATACCATTG...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTACTGTTTTTCCTCCCTaGTGTACCACCAACTTTACG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFTVFPP*CTTNFT
Trigger: CGTAAAGTTGGTGGTACATCAGGGAGGAAAAACAGT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCATTTTCTGTTGTTCTaGAGACAGCCCACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFHFLLF*RQPTAY
Trigger: ATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATCCAGCATCCATTaGGAATCCCAAGCATACACT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFESSIH*ESQAYT
Trigger: AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCCTTTGGATGGTGTTTaGAGGTTCCCCACAAATAGA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFPLDGV*RFPTNR
Trigger: TCTATTTGTGGGGAACCTTCAAACACCATCCAAAGG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTAAAAACAGTACAATaGCTGGGCTCTCACAAACCG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMLKTVQ*LGSHKP
Trigger: CGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGACATCCAGTTCCAATaGAGTCACTTACACAATTAC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIDIQFQ*SHLHNY
Trigger: GTAATTGTGTAAGTGACTGCATTGGAACTGGATGTC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTATTGCAGGCTGGGTTTaGACTGAAGCTTTACTCACA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFIAGWV*TEALLT
Trigger: TGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAAT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMSGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTGACTATATCCACATaGCCATTCTTGGCTGCATCG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFLTIST*PFLAAS
Trigger: CGATGCAGCCAAGAATGGGCATGTGGATATAGTCAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTCTTTCAGAATCAAGTaGAGCTGTTCTCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMSFRIK*SCSLLS
Trigger: GCTCAACAGAGAACAGCTGCACTTGATTCTGAAAGA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGAGATAACAGATGGTTaGCTACAGAAGGATACCAGC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEEITDG*LQKDTS
Trigger: GCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAGATAACAGATGGTTaGCTACAGAAGGATACCAGC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFEITDG*LQKDTS
Trigger: GCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp ACTTTCATCATCTGTATAATCGACAGGCCGCAGACCAAATATATTAACAGCATTACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 4 (lower is better)
Translates to: TFIICIIDRPQTKYINSITNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...AATGCTGTTAATATATTTGGTCTGCGGCCTGTCGATTATACAGATGATGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFINKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFNKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCTGCCGAACCCTCTCTaGGTGATAATTACACAAATC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFLPNPL*VIITQI
Trigger: GATTTGTGTAATTATCACCCAGAGAGGGTTCGGCAG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CCA 90 bp CTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAAGTATCTATTCCAGTACTCTaGAGAGCTATGCAACAATGT +
Preference number: 4 (lower is better)
Translates to: LNKVVLWMVFEGSPQIEVSIPVL*RAMQQC
Trigger: ACATTGTTGCATAGCTCTCCAGAGTACTGGAATAGA...TACTTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
3UTR CAA 72 bp AACTTCCAAAACATTCAGATTCTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCACCATTTATCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: NFQNIQILSRSH*LVSLFHHLSED
Trigger: GTCCTCAGATAAATGGTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAGAATCTGAATGTTTTGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455743.5
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTACTCACAACATATCTaGCTTTCTTACTTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFYSQHI*LSYFEG
Trigger: GCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACTGGAAAGTCTATTGTaGTGGCCACGTTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELESLL*WPRFPL
Trigger: TAATGGAAAACGTGGCCATCACAATAGACTTTCCAG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGGTGGTGTACCTGGTaGAAGACTAATGAATTCATC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFRWCTW*KTNEFI
Trigger: GATGAATTCATTAGTCTTTCACCAGGTACACCACCT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGGAAAGTAACAGCTTaGCTATATCCACATGCCCAT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFRKVTA*LYPHAH
Trigger: ATGGGCATGTGGATATAGTCAAGCTGTTACTTTCCT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCCAGGAACAACAACATaGGTTACTGTACTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFPGTTT*VTVLSN
Trigger: GTTTGACAGTACAGTAACTCATGTTGTTGTTCCTGG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAAACCTGTCTAAAATGTaGCCTATGAGGCAACAGAAA +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRNLSKM*PMRQQK
Trigger: TTTCTGTTGCCTCATAGGTCACATTTTAGACAGGTT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTACTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMLLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGTAA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAAGGATACCAGCTTTTaGTTAGATTCCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMKDTSF*LDSSLE
Trigger: CTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTCTGGAGACTCTATTTaGTCAGCCAATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSGDSI*SANGKE
Trigger: CTCTTTACCATTGGCTGAGCAAATAGAGTCTCCAGA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACACCAACTTTACGTTTaGATGAAGGTGGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEHQLYV*MKVVKN
Trigger: GTTCTTCACCACCTTCATGCAAACGTAAAGTTGGTG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: STMTGLSQTVQIQFEMFISLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCAAGGTACTTTGAACTaGATCACCAGGAACAACAAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFQGTLN*ITRNNN
Trigger: GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTACACTCACTAAGGCCTTaGCTATTTGATATTAGTAAG +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELHSLRP*LFDISK
Trigger: CTTACTAATATCAAATAGGCAAGGCCTTAGTGAGTG...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGGAAATGTGGGACAAATaGATTACTGGTTGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMEMWDK*ITGCRE
Trigger: CTCTCTACAACCAGTAATGCATTTGTCCCACATTTC...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR GCA 90 bp GAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACAAATAGAATACTCTGGAGAGCTATaGAACAATGTTATAACAGTA +
Preference number: 4 (lower is better)
Translates to: ELNKVVLWMVFEGSPQIEYSGEL*NNVITV
Trigger: TACTGTTATAACATTGTTGCATAGCTCTCCAGAGTA...TTCTATTTGTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTTTCACAGCCATATTaGGCAACAGCTTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFFSQPY*ATASLL
Trigger: CAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAACCAATGCCTTATGCTaGAGCAATAATTCCACTACC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFETNALC*SNNSTT
Trigger: GGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTCATTACTGAGCAGTaGCTAGCTGAGGATGATTCA +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFFITEQ*LAEDDS
Trigger: TGAATCATCCTCAGCTAGCCACTGCTCAGTAATGAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAAAAATAGCTACAAAGTaGCAGCTGTCAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELKIATK*QLSRKK
Trigger: CTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTT...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
3UTR CAA 72 bp CTTTTGTTAGTTAATAGACTTCCTCACCAAGTCATGTaGAGCCTCATTCAACAGCACAGAATAAGCCAATTT +
Preference number: 4 (lower is better)
Translates to: LLLVNRLPHQVM*SLIQQHRISQF
Trigger: AAATTGGCTTATTCTGTGCTGTTGAATGAGGCTCAACATGACTTGGTGAGGAAGTCTATTAACTAACAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFESLLQS*IMLSSC
Trigger: ACAACTGGACAGCATGATTCAACTTTGTAGTAAGCT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSLLQS*IMLSSC
Trigger: ACAACTGGACAGCATGATTCAACTTTGTAGTAAGCT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAATTTCACCATTTATCTaGGGACTGGAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRISPFI*GLEITD
Trigger: ATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAAT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGATTTCACCATTTATCTaGGGACTGGAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMISPFI*GLEITD
Trigger: ATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAAT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATTACTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGTAA...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTTACTACAGAAGATGTaGTCACATCCTCCTAAACAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFLLQKM*SHPPKH
Trigger: GTGTTTAGGAGGATGTGAGCACATCTTCTGTAGTAA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGACATCCAGTTCCAATaGAGTCACTTACACAATTAC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFDIQFQ*SHLHNY
Trigger: GTAATTGTGTAAGTGACTGCATTGGAACTGGATGTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAGACATCCAGTTCCAATaGAGTCACTTACACAATTAC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEDIQFQ*SHLHNY
Trigger: GTAATTGTGTAAGTGACTGCATTGGAACTGGATGTC...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAATTCACCAATGCCTTATaGTGGAGCAATAATTCCACT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEFTNAL*WSNNST
Trigger: AGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAA...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMSLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTATCATTCAGTTTGATGTaGGTATCTTTGAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RMKCGTNALLVVESVSELSFSLM*VSLKRV
Trigger: AACCCTTTTCAAAGATACGCACATCAAACTGAATGA...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAATAAGGTTGTCCTTTaGATGGTGTTTGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFENKVVL*MVFEGS
Trigger: GGAACCTTCAAACACCATCCAAAGGACAACCTTATT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR TCA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATTTCACCATTTATCTaGGGACTGGAGATAACAGAT +
Preference number: 4 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEISPFI*GLEITD
Trigger: ATCTGTTATCTCCAGTCCTCAGATAAATGGTGAAAT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR TCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTACAAATCTTCATAGATaGTATACTGTGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFTNLHR*YTVCRS
Trigger: GCTTCTGCACACAGTATATCATCTATGAAGATTTGT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR GCA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGCCTTAAGAATTACTaGAAGCTCACTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSLKNY*KLTEHF
Trigger: AAAATGCTCAGTGAGCTTGCAGTAATTCTTAAGGCT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS CCA 90 bp GCGCGGCGCGACTGTGGGCCCAGGCACCGCGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCTCGTTCCCGGAGCGGATCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: ARRDCGPRHRDHPVP*RARNEARSRSGSSA
Trigger: AGCCGAGGATCCGCTCCGGGAACGAGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS CCA 90 bp GAGCAGCGCAGCAGCTTCTCCAGGCGGTCGAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCATCCGGTTCCATGGCGGGCGCGGAA +
Preference number: 5 (lower is better)
Translates to: EQRSSFSRRSSAARL*AQAPRPSGSMAGAE
Trigger: TTCCGCGCCCGCCATGGAACCGGATGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCTCGACCGCCTGGAGAAGCTGCTGCGCTGCTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS GCA 90 bp ATGGCGGGCGCGGAACGAGGCTCGTTCCCGGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGATTATCCGGCATCGTCCCGCCTTCG +
Preference number: 5 (lower is better)
Translates to: MAGAERGSFPERILG*RFLGCRLSGIVPPS
Trigger: CGAAGGCGGGACGATGCCGGATAATCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTCCGGGAACGAGCCTCGTTCCGCGCCCGCCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS GCA 90 bp CGAGGCTCGTTCCCGGAGCGGATCCTCGGCTGCCGGTTCCTCGGCTaGCGATTATCCGGCATCGTCCCGCCTTCGGATGAAAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGSFPERILGCRFLG*RLSGIVPPSDERLL
Trigger: GAGGAGCCTTTCATCCGAAGGCGGGACGATGCCGGATAATCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTCCGGGAACGAGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS TCA 90 bp CCGGTTCCTCGGCTGCCGATTATCCGGCATCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCGGGAAGCAAGGAAGCCTCGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PVPRLPIIRHRPAFG*KAPRRAGSKEASGN
Trigger: GTTTCCCGAGGCTTCCTTGCTTCCCGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACGATGCCGGATAATCGGCAGCCGAGGAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260947.9
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000620057.4
CDS CCA 90 bp AAAAATAGCTTCCCTCTGCTGCCAGCCTCCAGCGAAGGTAGACTGTaGCAAAGGAGTTCTGGGGAACTGGTCTCAGGTAGTCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KNSFPLLPASSEGRL*QRSSGELVSGSLPS
Trigger: GGAGGGCAGACTACCTGAGACCAGTTCCCCAGAACTCCTTTGCCACAGTCTACCTTCGCTGGAGGCTGGCAGCAGAGGGAAGCTATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CAA 90 bp GACAGCCCACTGCCTATAAGTACAAGAGGTCCATCCCTACGCTGCCCAGTGTTCAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: DSPLPISTRGPSLRCPVFNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...GAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAGGCAGTGGGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp CTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACTGTATTAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: LCAEALIRIGSRMVCDCINSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...AATACAGTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp GCCCATTCTTGGCTGCATCGTGAAGTGGTGAGTCATTTTGATACCCGGTGGTGTACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: AHSWLHREVVSHFDTRWCTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...ACACCACCGGGTATCAAAATGACTCACCACTTCACGATGCAGCCAAGAATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp CAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 5 (lower is better)
Translates to: QSINQLEGAFQTLPCRTLHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...GAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCCTCTCTGGGTGATAATTACAGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 5 (lower is better)
Translates to: RRSLPDFALPNPLWVIITGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...TGTAATTATCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp GTATGCGACTGTATTGATGGTCTGAGTCACGTCACTGTCTGGCTTGGGCTTTCTACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: VCDCIDGLSHVTVWLGLSTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp CATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: HHTVYKPARRSLPDFALPIYLQV*YPGRGV
Trigger: TACACCCCGGCCTGGATACAAGACTTGAAGATAAAT...CGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGACCACCAACTTTACGTTaGCATGAAGGTGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SFGNSCSLLSLLLRGPSGPPTLR*HEGGEE
Trigger: TTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGG...TCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGACTTTTCACAGCCATATaGGGCAACAGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: SFGNSCSLLSLLLRGPSGLFTAI*GNSFIA
Trigger: AGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAG...TCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp ACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGAACCAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: TQSINQLEGAFQTLPCRTRIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...GGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp TACCCGGTGGTGTTCACCAATGCCTTATGCTGGAGCAATAATTCCACTACCTTCAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: YPVVFTNALCWSNNSTTFNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...GAAGGTAGTGGAATTATTGCTCCAGCATAAGGCATTGGTGAACACCACCGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp CCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: PAVTSLIRLSFGWCLKVPTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPIYLQV*YPGRGV
Trigger: TACACCCCGGCCTGGATACAAGACTTGAAGATAAAT...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp GATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCGACCTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCAC +
Preference number: 5 (lower is better)
Translates to: DILCAEALIRIGSRMVCDLSRSH*LVSLFH
Trigger: GTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAG...GTCGCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp TCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTCTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCAC +
Preference number: 5 (lower is better)
Translates to: SNSFGNSCSLLSLLLRGPLSRSH*LVSLFH
Trigger: GTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAG...AGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp GATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGTCTCGCATGGTATGCCGCCCTGACAGCTCATaGTCATGTAGCAAATTTCGA +
Preference number: 5 (lower is better)
Translates to: DDILCAEALIRIGSRMVCRPDSS*SCSKFR
Trigger: TCGAAATTTGCTACATGACAATGAGCTGTCAGGGCG...GCATACCATGCGAGACCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620057.4
CDS-3UTR CAA 90 bp CATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCTGCCGTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCT +
Preference number: 5 (lower is better)
Translates to: HHTVYKPARRSLPDFALPCLDSS*ESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCA...CGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 5 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CCCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: PTCSDELNKVVLWMVFEGRIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...ACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455743.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AAAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: KGHHTVYKPARRSLPDFARIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...GGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AACAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTGGACCTTCAGGAATTTCATACATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: NSCSLLSLLLRGPSGISYIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...GTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp GCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTCCCCACATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: AVTSLIRLSFGWCLKVPHIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...GTGGGGAACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp GAAGGTTCCCCACAAATAGAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGCTTTTCACAGCCATATaGGGCAACAGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: EGSPQIEVASIKQLWQQLLFTAI*GNSFIA
Trigger: AGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAG...CAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTCTATTTGTGGGGAACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CCACCTGCAGTGACGAGCTTAATAAGGTTGTCCTTTGGATGGTGTTTGAAGGTTATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: PPAVTSLIRLSFGWCLKVIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...AACCTTCAAACACCATCCAAAGGACAACCTTATTAAGCTCGTCACTGCAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AAGGACATCACACAGTCTATAAACCAGCTCGAAGGAGCCTTCCAGACTTTGCCCATCCATCAAACAGCTTaGGCAACTTCTGGATTTTAC +
Preference number: 5 (lower is better)
Translates to: KDITQSINQLEGAFQTLPIHQTA*ATSGFY
Trigger: GTAAAATCCAGAAGTTGCCAAAGCTGTTTGATGGAT...GGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGTGTGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS CCA 90 bp TCTATTTATCTTCAAGTCTTGTATCCAGGCCGGGGTGTAACACACTaGACATCCAGTTCCAATGCAGTCACTTACACAATTACAACGCGA +
Preference number: 5 (lower is better)
Translates to: SIYLQVLYPGRGVTH*TSSSNAVTYTITTR
Trigger: TCGCGTTGTAATTGTGTAAGTGACTGCATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAGATAAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617164.5
CDS-3UTR CAA 90 bp GAAGTAGCATCCATCAAACAGCTTTGGCAACAGCTGTTCTCTGTTGAGCCTGCTTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCT +
Preference number: 5 (lower is better)
Translates to: EVASIKQLWQQLFSVEPACLDSS*ESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCA...AGCAGGCTCAACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGATGCTACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFINSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACCGTTGGACTGACAATTaGCTAGACTGGTCAGACCTT +
Preference number: 5 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYRWTDN*LDWSDL
Trigger: AAGGTCTGACCAGTCTAGCAAATTGTCAGTCCAACG...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp GGCCTTGCCTATTTGATATTAGTAAGCCCTCCCCATACCTACTTCTATACTTACCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 5 (lower is better)
Translates to: GLAYLILVSPPHTYFYTYHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...GTAAGTATAGAAGTAGGTATGGGGAGGGCTTACTAATATCAAATAGGCAAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AATCCCAAGCATACACTTCAAGGTACTTTGAACTGCATCACCAGGAACAACAACCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 5 (lower is better)
Translates to: NPKHTLQGTLNCITRNNNHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...GTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455743.5
ENST00000650978.1
CDS-3UTR CAA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGAAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRNSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp ACACAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCGGGATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: TQIFIDDILCAEALIRIGIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...CCCGATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp ATTACACAAATCTTCATAGATGATATACTGTGTGCAGAAGCGCTGATCAGAATCACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: ITQIFIDDILCAEALIRITSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...GATTCTGATCAGCGCTTCTGCACACAGTATATCATCTATGAAGATTTGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000432456.5
ENST00000455743.5
ENST00000613192.2
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGACGTCACTGTCTGGCTaGGGCTTTCTACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMTSLSG*GFLLRI
Trigger: GATCCTCAGTAGAAAGCCCAAGCCAGACAGTGACGT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260947.9
ENST00000432456.5
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS CCA 90 bp TCTATTTATCTTCAAGTCTTGTATCCAGGCCGGGGTGTAACACACTaGACATCCAGTTCCAATGCAGTCACTTACACAATTACTACAGAA +
Preference number: 5 (lower is better)
Translates to: SIYLQVLYPGRGVTH*TSSSNAVTYTITTE
Trigger: TTCTGTAGTAATTGTGTAAGTGACTGCATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAGATAAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS CCA 90 bp TTTCAGAATCAAGTGCAGCTGTTCTCTGTTGAGCCTGCTTCTGCGTaGACCTTCAGGAATTTCATACTTTTCTTCCTGTTCACATACTTT +
Preference number: 5 (lower is better)
Translates to: FQNQVQLFSVEPASA*TFRNFILFFLFTYF
Trigger: AAAGTATGTGAACAGGAAGAAAAGTATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGCACTTGATTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAACAGCTGTTCTCTGTaGAGCCTGCTTCTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFENSCSL*SLLLRG
Trigger: TCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGTT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFIYLQV*YPGRGV
Trigger: TACACCCCGGCCTGGATACAAGACTTGAAGATAAAT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCCCACCAACTTTACGTTaGCATGAAGGTGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFPPTLR*HEGGEE
Trigger: TTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGG...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp CAGACATTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTCTTTTCACAGCCATATaGGGCAACAGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: QTLSNASDFCLVLWCSFSLFTAI*GNSFIA
Trigger: AGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAG...AGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFRIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGAATGAAATGTGGGACAAATGCATTACTGGTTGTAGAGAGTGTTTCAGAGCTAATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RMKCGTNALLVVESVSELIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...TAGCTCTGAAACACTCTCTACAACCAGTAATGCATTTGTCCCACATTTCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFIIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMIYLQV*YPGRGV
Trigger: TACACCCCGGCCTGGATACAAGACTTGAAGATAAAT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGGAGATAACAGATGGTaGGCTACAGAAGGATACCAG +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFGDNRW*ATEGYQ
Trigger: CTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp TTATCTAACGCCTCGGATTTTTGTTTGGTGCTATGGTGTTCATTTTCTATCAGACCACCAACTTTACGTTaGCATGAAGGTGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSNASDFCLVLWCSFSIRPPTLR*HEGGEE
Trigger: TTCTTCACCACCTTCATGCAAACGTAAAGTTGGTGG...TCTGATAGAAAATGAACACCATAGCACCAAACAAAAATCCGAGGCGTTAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMRIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCACCATGAGCCTAGTGTaGATTTTTACCACACACACA +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFITMSLV*IFTTHT
Trigger: TGTGTGTGTGGTAAAAATCAACACTAGGCTCATGGT...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCGCCTCGGATTTTTGTTaGGTGCTATGGTGTTCATTT +
Preference number: 5 (lower is better)
Translates to: NSTMTGLSQTVQIQFEMFASDFC*VLWCSF
Trigger: AAATGAACACCATAGCACCAAACAAAAATCCGAGGC...GAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTA +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFIYLQV*YPGRGV
Trigger: TACACCCCGGCCTGGATACAAGACTTGAAGATAAAT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGAGACAGAAAAATAGCTACAAAGTGGCAGCTGTCAAGGAAAAAGGGAAACAGTAAATCTGACAGCTCATaGTCATGTAGCAAATTTCGA +
Preference number: 5 (lower is better)
Translates to: RDRKIATKWQLSRKKGNSKSDSS*SCSKFR
Trigger: TCGAAATTTGCTACATGACAATGAGCTGTCAGATTT...ACTGTTTCCCTTTTTCCTTGACAGCTGCCACTTTGTAGCTATTTTTCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp GCTGAGGATGATTCATTCTTCTCTGGTAGCAGCAATAGCGATTTCATACTTTCAAAATCTGACAGCTCATaGTCATGTAGCAAATTTCGA +
Preference number: 5 (lower is better)
Translates to: AEDDSFFSGSSNSDFILSKSDSS*SCSKFR
Trigger: TCGAAATTTGCTACATGACAATGAGCTGTCAGATTT...TGAAAGTATGAAATCGCTATTGCTGCTACCAGAGAAGAATGAATCATCCTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCATCTGCAGGAGGACTaGGGGAAACAAATTCATATG +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFHLQED*GKQIHM
Trigger: CATATGAATTTGTTTCCCCAAGTCCTCCTGCAGATG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTTCATCTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCT +
Preference number: 5 (lower is better)
Translates to: STMTGLSQTVQIQFEMFICLDSS*ESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCA...GATGAACATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTCTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCAC +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFLSRSH*LVSLFH
Trigger: GTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAG...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACTGTCAAGGAGCCACTaGCTAGTAAGTCTATTTCAC +
Preference number: 5 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELSRSH*LVSLFH
Trigger: GTGAAATAGACTTACTAGCAAGTGGCTCCTTGACAG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAACTTTTCACAGCCATATaGGGCAACAGCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFELFTAI*GNSFIA
Trigger: AGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAG...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTAGAATCCAGCATCCATaGAGAATCCCAAGCATACAC +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFRIQHP*RIPSIH
Trigger: GTGTATGCTTGGGATTCTCAATGGATGCTGGATTCT...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATCCATCAAACAGCTTaGGCAACAGCTGTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEIHQTA*ATAVLC
Trigger: ACAGAGAACAGCTGTTGCCAAAGCTGTTTGATGGAT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000650978.1
CDS TCA 90 bp TTATTTTCCTTAATAGAAGCAATATGGAGCAAAGTCTCTCCTCTATaGTTTCTTTTCACAGCCATATTGGGCAACAGCTTCATTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LFSLIEAIWSKVSPL*FLFTAILGNSFIAE
Trigger: CTCAGCAATGAAGCTGTTGCCCAATATGGCTGTGAAAAGAAATCATAGAGGAGAGACTTTGCTCCATATTGCTTCTATTAAGGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS-3UTR CAA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGTGCTTAGATTCCTCTTaGGAGTCAAATTCACCATCT +
Preference number: 5 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMCLDSS*ESNSPS
Trigger: AGATGGTGAATTTGACTCCAAAGAGGAATCTAAGCA...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS TCA 90 bp GACAGCTCATTGTCATGTAGCAAATTTCGAAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGTCTATTTATCTTCAAGTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: DSSLSCSKFRSLLQS*IMLSSCLFIFKSCI
Trigger: GATACAAGACTTGAAGATAAATAGACAACTGGACAGCATGATTCAACTTTGTAGTAAGCTTCGAAATTTGCTACATGACAATGAGCTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS-3UTR CAA 90 bp AAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAATGAAATCTGACAGCTCATaGTCATGTAGCAAATTTCGA +
Preference number: 5 (lower is better)
Translates to: KNSTMTGLSQTVQIQFEMKSDSS*SCSKFR
Trigger: TCGAAATTTGCTACATGACAATGAGCTGTCAGATTT...CATTTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTTCAAACTGTCCTCTTTaGTTCATGAGGAACCAAACT +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFSNCPL*FMRNQT
Trigger: AGTTTGGTTCCTCATGAACAAAAGAGGACAGTTTGA...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS-3UTR CAA 90 bp ATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAAATCTGACAGCTCATaGTCATGTAGCAAATTTCGA +
Preference number: 5 (lower is better)
Translates to: IKNSTMTGLSQTVQIQFEKSDSS*SCSKFR
Trigger: TCGAAATTTGCTACATGACAATGAGCTGTCAGATTT...TTCAAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000650978.1
CDS-3UTR CAA 90 bp AACATTAAAAACAGTACAATGACTGGGCTCTCACAAACCGTGCAAATTCAATTTGAAAACCTTCACACATaGCTCATTTACCCTTATTTC +
Preference number: 5 (lower is better)
Translates to: NIKNSTMTGLSQTVQIQFENLHT*LIYPYF
Trigger: GAAATAAGGGTAAATGAGCAATGTGTGAAGGTTTTC...AAATTGAATTTGCACGGTTTGTGAGAGCCCAGTCATTGTACTGTTTTTAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260947.9
CDS CCA 72 bp GACTGTGGGCCCAGGCACCGCGACCATCCGGTTCCATaGCGGGCGCGGAACGAGGCTCGTTCCCGGAGCGGA +
Preference number: 6 (lower is better)
Translates to: DCGPRHRDHPVP*RARNEARSRSG
Trigger: TCCGCTCCGGGAACGAGCCTCGTTCCGCGCCCGCCATGGAACCGGATGGTCGCGGTGCCTGGGCCCACAGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS CCA 72 bp AGCAGCTTCTCCAGGCGGTCGAGCGCGGCGCGACTGTaGGCCCAGGCACCGCGACCATCCGGTTCCATGGCG +
Preference number: 6 (lower is better)
Translates to: SSFSRRSSAARL*AQAPRPSGSMA
Trigger: CGCCATGGAACCGGATGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCTCGACCGCCTGGAGAAGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS GCA 72 bp GCGGAACGAGGCTCGTTCCCGGAGCGGATCCTCGGCTaGCGGTTCCTCGGCTGCCGATTATCCGGCATCGTC +
Preference number: 6 (lower is better)
Translates to: AERGSFPERILG*RFLGCRLSGIV
Trigger: GACGATGCCGGATAATCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTCCGGGAACGAGCCTCGTTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS GCA 72 bp TTCCCGGAGCGGATCCTCGGCTGCCGGTTCCTCGGCTaGCGATTATCCGGCATCGTCCCGCCTTCGGATGAA +
Preference number: 6 (lower is better)
Translates to: FPERILGCRFLG*RLSGIVPPSDE
Trigger: TTCATCCGAAGGCGGGACGATGCCGGATAATCGGCAGCCGAGGAACCGGCAGCCGAGGATCCGCTCCGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260947.9
ENST00000421162.2
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
CDS TCA 72 bp CGGCTGCCGATTATCCGGCATCGTCCCGCCTTCGGATaGAAGGCTCCTCGCAGAGCGGGAAGCAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RLPIIRHRPAFG*KAPRRAGSKEA
Trigger: GGCTTCCTTGCTTCCCGCTCTGCGAGGAGCCTTTCATCCGAAGGCGGGACGATGCCGGATAATCGGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260947.9
ENST00000455743.5
ENST00000471787.1
ENST00000479904.1
ENST00000613192.2
ENST00000613374.5
ENST00000613706.5
ENST00000617164.5
ENST00000620057.4
CDS GCA 72 bp GGGAAGCAAGGAAGCCTCGGGAAACCACAGGGAAGCTaGAGGCCAGCGACTCGAAACCGGCCAAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GKQGSLGKPQGS*RPATRNRPSSS
Trigger: GGAAGAGCTTGGCCGGTTTCGAGTCGCTGGCCTGCAGCTTCCCTGTGGTTTCCCGAGGCTTCCTTGCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260947.9
ENST00000613192.2
ENST00000613706.5
CDS CCA 72 bp TTCCCTCTGCTGCCAGCCTCCAGCGAAGGTAGACTGTaGCAAAGGAGTTCTGGGGAACTGGTCTCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: FPLLPASSEGRL*QRSSGELVSGS
Trigger: ACTACCTGAGACCAGTTCCCCAGAACTCCTTTGCCACAGTCTACCTTCGCTGGAGGCTGGCAGCAGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS GCA 72 bp AGGCCGGGGTGTAACACACTGGACATCCAGTTCCAATaGAGTCACTTACACAATTACAACGCGAGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: RPGCNTLDIQFQ*SHLHNYNASSA
Trigger: TGCGCTGCTCGCGTTGTAATTGTGTAAGTGACTGCATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617164.5
CDS CCA 72 bp GCGAAGGTAGACTGTGGCAAAGGAGTTCTGGGGAACTaGTCTCAGGTAGTCTGCCCTCCCACTCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: AKVDCGKGVLGN*SQVVCPPTLLF
Trigger: AAAAAGAAGAGTGGGAGGGCAGACTACCTGAGACCAGTTCCCCAGAACTCCTTTGCCACAGTCTACCTTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650978.1
CDS GCA 72 bp AGGCCGGGGTGTAACACACTGGACATCCAGTTCCAATaGAGTCACTTACACAATTACTACAGAAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: RPGCNTLDIQFQ*SHLHNYYRRCA
Trigger: AGCACATCTTCTGTAGTAATTGTGTAAGTGACTGCATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS CCA 72 bp CTTCAAGTCTTGTATCCAGGCCGGGGTGTAACACACTaGACATCCAGTTCCAATGCAGTCACTTACACAATT +
Preference number: 6 (lower is better)
Translates to: LQVLYPGRGVTH*TSSSNAVTYTI
Trigger: AATTGTGTAAGTGACTGCATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS TCA 72 bp GATCATCTTTCAGAATCAAGTGCAGCTGTTCTCTGTTaGGCCTGCTTCTGCGTGGACCTTCAGGAATTTCAT +
Preference number: 6 (lower is better)
Translates to: DHLSESSAAVLC*ACFCVDLQEFH
Trigger: ATGAAATTCCTGAAGGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGCACTTGATTCTGAAAGATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432456.5
CDS CAA 72 bp AATCATGCTGTCCAGTTGTCTATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTAACACACTGGACATCC +
Preference number: 6 (lower is better)
Translates to: NHAVQLSIYLQV*YPGRGVTHWTS
Trigger: GGATGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAGATAAATAGACAACTGGACAGCATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS CAA 90 bp ACAAAGTTGAATCATGCTGTCCAGTTGTCTATTTATCTTCAAGTCTaGTATCCAGGCCGGGGTGTAACACACTGGACATCCAGTTCCAAT +
Preference number: 6 (lower is better)
Translates to: TKLNHAVQLSIYLQV*YPGRGVTHWTSSSN
Trigger: ATTGGAACTGGATGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAGATAAATAGACAACTGGACAGCATGATTCAACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1
CDS CAA 72 bp TCCAATTTGGCAAAGCTGTCTACTAAGCTTTGTAACTaGGACAAGTCATCCTCTTTGAGCTTTGGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: SNLAKLSTKLCN*DKSSSLSFGFL
Trigger: AAGAAAACCAAAGCTCAAAGAGGATGACTTGTCCAAGTTACAAAGCTTAGTAGACAGCTTTGCCAAATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479904.1
CDS TCA 72 bp GACAGTTATATGTCTAATCGTCTGTTAAACTGTAAGTaGTTTGACATGAAGGAATGTGCTTTAGTCTACAGC +
Preference number: 6 (lower is better)
Translates to: DSYMSNRLLNCK*FDMKECALVYS
Trigger: GCTGTAGACTAAAGCACATTCCTTCATGTCAAATCACTTACAGTTTAACAGACGATTAGACATATAACTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471590.5
CDS TCA 72 bp TTGTCATGTAGCAAATTTCGAAGCTTACTACAAAGTTaGATCATGCTGTCCAGTTGTCTATTTATCTTCAAG +
Preference number: 6 (lower is better)
Translates to: LSCSKFRSLLQS*IMLSSCLFIFK
Trigger: CTTGAAGATAAATAGACAACTGGACAGCATGATTCAACTTTGTAGTAAGCTTCGAAATTTGCTACATGACAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260947.9
ENST00000613706.5
ENST00000617164.5
ENST00000619009.5
ENST00000620057.4
ENST00000650978.1