RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163930

Ensembl transcript IDs: ENST00000296288.9, ENST00000460680.6, ENST00000466093.1, ENST00000469613.5, ENST00000470173.1, ENST00000471532.5, ENST00000478368.1, ENST00000483984.5, ENST00000490804.1, ENST00000490917.1

Found 596 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GLICRVRPQGTMEGM*PGSSHSQGLDSPAG
Trigger: CCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCT +
Preference number: 1 (lower is better)
Translates to: GCGGSCSTSLCPNSR*CLLSTMGLICRVRP
Trigger: AGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 90 bp TGCTGCTCCACAGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATC +
Preference number: 1 (lower is better)
Translates to: CCSTAGCGGSCSTSL*PNSRCCLLSTMGLI
Trigger: GATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 90 bp TGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGCACGATGGAAGGAATGTGGCCTGGT +
Preference number: 1 (lower is better)
Translates to: CPNSRCCLLSTMGLI*RVRPQGTMEGMWPG
Trigger: ACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 90 bp TGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: CGGSCSTSLCPNSRC*LLSTMGLICRVRPQ
Trigger: CTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR CCA 90 bp GATCTGCCGTGTCAGGCCTCAGGGCACGATGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTAT +
Preference number: 1 (lower is better)
Translates to: DLPCQASGHDGRNVA*FLPFPGPGLSSWDY
Trigger: ATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCCTGACACGGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTaGAACACAGGGGCTCCAACGGGTTGTCTTGATCCTGCTGTCCCC +
Preference number: 1 (lower is better)
Translates to: SRGTAGPITPWHQVL*NTGAPTGCLDPAVP
Trigger: GGGGACAGCAGGATCAAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR GCA 90 bp GATAGGCACATAGCTGACAAAGTGGAACGCCTCCATGGTCCGCACTaGACTAAGGCCATTCTGCTTCTCAGGGAGGTGGCGTGGCTCGGG +
Preference number: 1 (lower is better)
Translates to: DRHIADKVERLHGPH*TKAILLLREVAWLG
Trigger: CCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGCAGTGCGGACCATGGAGGCGTTCCACTTTGTCAGCTATGTGCCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR CCA 90 bp GCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATaGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGTT +
Preference number: 1 (lower is better)
Translates to: ARATTLKAKSPRTLL*RAVLNSLARTRKTV
Trigger: AACTGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGCCAGGTCCTGCTaGTCCACAGCCGGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHRARSC*STAGCG
Trigger: TCCACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCT...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PPEHYGADLPCQASGHDGATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAGCTCTGCTCAGGCCATaGGATCCCAGCAGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGALLRP*DPSSLL
Trigger: GAGCAGGCTGCTGGGATCCCATGGCCTGAGCAGAGC...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPTMGLI*RVRPQG
Trigger: GCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCTCCACAGCCGGCTGTaGAGGAAGCTGCAGTACCTC +
Preference number: 2 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPLHSRL*RKLQYL
Trigger: GAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACACAGGGACAGGCTGGTaGCTGGGGCTAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHTGTGW*LGLEQQ
Trigger: CTGCTGCTCTAGCCCCAGCCACCAGCCTGTCCCTGT...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 2 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 2 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAAGTTCCCACATGCTCTaGTCAGGCCATGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGSSHML*SGHGIP
Trigger: TGGGATCCCATGGCCTGAGCAGAGCATGTGGGAACT...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 2 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACATCACCCCAACCCCACTaGGACACCCTACTCCCAACC +
Preference number: 2 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTSPQPH*DTLLPT
Trigger: GGTTGGGAGTAGGGTGTCCCAGTGGGGTTGGGGTGA...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp GACCTTCAGCCCATCCAGCTCAAAGAGCCGGCCTGTGATAGGCACATAGCTGACGGCTCGGGCCTGGCATaGCTATTATGGGCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: DLQPIQLKEPACDRHIADGSGLA*LLWALA
Trigger: GGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCC...GTCAGCTATGTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR-3UTR GCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACTGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATG +
Preference number: 2 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHCPNSR*CLLSTM
Trigger: CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 2 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CAA 90 bp TCGGGCCTGGCATGGCTATTATGGGCCTTGGCCAACTCCGGGGCATaGCCAATCGCATATCCTTTGCTCTCAGGGCTGAAACCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: SGLAWLLWALANSGA*PIAYPLLSGLKPLV
Trigger: CACCAAGGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAGGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR-3UTR TCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTTCCAACGGGTTGTCTTaGTCCTGCTGTCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCSNGLS*SCCPPP
Trigger: GGGTGGGGGACAGCAGGATCAAGACAACCCGTTGGA...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: FRPIARATTLKAKSPRTLGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCC +
Preference number: 2 (lower is better)
Translates to: QLQMLPPEHYGADLPCQATMEGM*PGSSHS
Trigger: GGAATGGGAGGAACCAGGCCACATTCCTTCCATCGT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR TCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCCAGTGCTGGGTCCCTaGGTTTGGCACTCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLPVLGP*VWHSPK
Trigger: CTTAGGAGAGTGCCAAACTCAGGGACCCAGCACTGG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCC +
Preference number: 2 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTTMEGM*PGSSHS
Trigger: GGAATGGGAGGAACCAGGCCACATTCCTTCCATCGT...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACCCTGGACTCTCCAGCTaGGACTATTCAGTAATACTG +
Preference number: 2 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHPGLSS*DYSVIL
Trigger: CAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGAACCCAGCCCAGTGCTaGGTCCCTGAGTTTGGCACT +
Preference number: 2 (lower is better)
Translates to: FRPIARATTLKAKSPRTLNPAQC*VPEFGT
Trigger: AGTGCCAAACTCAGGGACCCAGCACTGGGCTGGGTT...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTANMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGTAATACTGAGGGGCTaGACAGAGGCTCTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCVILRG*TEALLS
Trigger: GCTCAGAAGAGCCTCTGTCCAGCCCCTCAGTATTAC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CAA 90 bp CCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTaGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PIARATTLKAKSPRT*LWRAVLNSLARTRK
Trigger: CTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR TCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGCAGTTCACAGGCCACTaGACAGTTCCCACATGCTCT +
Preference number: 2 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLQFTGH*TVPTCS
Trigger: AGAGCATGTGGGAACTGTTCAGTGGCCTGTGAACTG...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR TCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTTGTCTCTGCTACCCCTaGGAGGGAGACATGGTAATA +
Preference number: 2 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLCLCYP*EGDMVI
Trigger: TATTACCATGTCTCCCTCTCAGGGGTAGCAGAGACA...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp AAAGAGCCGGCCTGTGATAGGCACATAGCTGACAAAGTGGAACGCCTCCATGGTCCAACTCCGGGGCATTaGCAATCGCATATCCTTTGC +
Preference number: 2 (lower is better)
Translates to: KEPACDRHIADKVERLHGPTPGH*QSHILC
Trigger: GCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGG...ACCATGGAGGCGTTCCACTTTGTCAGCTATGTGCCTATCACAGGCCGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAACCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 2 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAA +
Preference number: 2 (lower is better)
Translates to: FRPIARATTLKAKSPRTLLGPCS*DRGMIQ
Trigger: TTGTATCATGCCACGGTCCCAACTACAGGGTCCTAG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLNMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGCSTSL*PNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR GCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGTAAAATATATATTCTaGTGCCCAGGCAGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKVKYIF*CPGRRA
Trigger: GGCCCTTCTGCCTGGGCAGCAGAATATATATTTTAC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR CCA 72 bp AGGGCCCACCCAGGCCCCCAGCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAAGGACCTGGGCCCACC +
Preference number: 3 (lower is better)
Translates to: RAHPGPQLGPCS*DRGMIQGPGPT
Trigger: GGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGGGCCTGGGTGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR GCA 72 bp AGGTCCTGCTGCTCCACAGCCGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCCAACTCCAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: RSCCSTAGCGGS*STSLCPNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAGCAGCAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 72 bp CCTTCATGCGACTCAGGGTGGGTCCCAGGTCCACGCTaGTGCAGTTCAGGAGCACGCTCAGCAAGGCATGAG +
Preference number: 3 (lower is better)
Translates to: PSCDSGWVPGPR*CSSGARSARHE
Trigger: CTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR CCA 72 bp CGCACTGCACTAAGGCCATTCTGCTTCTCAGGGAGGTaGCGTGGCTCGGGCCTGGCATGGCTATTATGGGCC +
Preference number: 3 (lower is better)
Translates to: RTALRPFCFSGR*RGSGLAWLLWA
Trigger: GGCCCATAATAGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGCAGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR GCA 72 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGGCTGATCTGCCGTGTC +
Preference number: 3 (lower is better)
Translates to: SCSTSLCPNSRC*LLSTMGLICRV
Trigger: GACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 72 bp GGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATGGGGCTGATCTGCCGT +
Preference number: 3 (lower is better)
Translates to: GSCSTSLCPNSR*CLLSTMGLICR
Trigger: ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 72 bp TCATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTaGAGTTCAGGAGCACGCTCAGCAAGGCATGAGTTG +
Preference number: 3 (lower is better)
Translates to: SCDSGWVPGPRC*SSGARSARHEL
Trigger: CAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR GCA 72 bp TCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGCACGATGGAAGGAATG +
Preference number: 3 (lower is better)
Translates to: SRCCLLSTMGLI*RVRPQGTMEGM
Trigger: CATTCCTTCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR GCA 72 bp ACAGTTCACAGGCCACTGAACAGTTCCCACATGCTCTaGTCAGGCCATGGGATCCCAGCAGCCTGCTCACCC +
Preference number: 3 (lower is better)
Translates to: TVHRPLNSSHML*SGHGIPAACSP
Trigger: GGGTGAGCAGGCTGCTGGGATCCCATGGCCTGAGCAGAGCATGTGGGAACTGTTCAGTGGCCTGTGAACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CCA 72 bp TGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATaGGGCTGTGTTGGGGCCTGGGCTCCAGAGGCACTG +
Preference number: 3 (lower is better)
Translates to: WITFFKAIWQRP*GCVGAWAPEAL
Trigger: CAGTGCCTCTGGAGCCCAGGCCCCAACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CCA 72 bp ACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTaGAACACAGGGGCTCCAACGGGTTGTCTTGATCCT +
Preference number: 3 (lower is better)
Translates to: TAGPITPWHQVL*NTGAPTGCLDP
Trigger: AGGATCAAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR GCA 72 bp ATAGCTGACAAAGTGGAACGCCTCCATGGTCCGCACTaGACTAAGGCCATTCTGCTTCTCAGGGAGGTGGCG +
Preference number: 3 (lower is better)
Translates to: IADKVERLHGPH*TKAILLLREVA
Trigger: CGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGCAGTGCGGACCATGGAGGCGTTCCACTTTGTCAGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR-3UTR CAA 90 bp AATGGGGTAGACCTTCAGCCCATCCAGCTCAAAGAGCCGGCCTGTGATAGGCACCCAATCGCATATCCTTaGCTCTCAGGGCTGAAACCC +
Preference number: 3 (lower is better)
Translates to: NGVDLQPIQLKEPACDRHPIAYP*LSGLKP
Trigger: GGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGG...GTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAAGGTCTACCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
3UTR CCA 72 bp TGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTaGGACTATTCAGTAATACTGGGAAAAGGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: WFLPFPGPGLSS*DYSVILGKGEV
Trigger: CACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
3UTR-3UTR CAA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTCTATGGAGAGCAGTCTaGAACAGCCTGGCTAGAACA +
Preference number: 3 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCLWRAV*NSLART
Trigger: TGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAG...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR-3UTR CAA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCAACATGGTGGCATGTaGGGTTGGAGCCCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: FRPIARATTLKAKSPRTLQHGGM*GWSPEK
Trigger: TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CCA 72 bp ACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATaGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGG +
Preference number: 3 (lower is better)
Translates to: TTLKAKSPRTLL*RAVLNSLARTR
Trigger: CCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CCA 72 bp CCACTCAGTCACTATGTACAGATAAAGGGGCCTGCTTaGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: PLSHYVQIKGPA*ITFFKAIWQRP
Trigger: TGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTATCTGTACATAGTGACTGAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCCCGCGTCGGGTTGGCTaGGCGGATAGGCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVPRRVG*ADRRAQ
Trigger: CTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGG...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp GTGGCTCGGGCCTGGCATGGCTATTATGGGCCTTGGCCAACTCCGGGGCATTGCCTCAGGGAGGTGGCGTaGCTCGGGCCTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VARAWHGYYGPWPTPGHCLREVA*LGPGMA
Trigger: AGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAG...GCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR TCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTCCGCGTCGGGTTGGCTaGGCGGATAGGCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAPRRVG*ADRRAQ
Trigger: CTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGG...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR TCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCCGCGTCGGGTTGGCTaGGCGGATAGGCGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGPRRVG*ADRRAQ
Trigger: CTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR TCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGAGCCGGCCGATGCTaGCCCCTTGGCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYGAGRC*PLGAAA
Trigger: TGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp GGCGTGGCTCGGGCCTGGCATGGCTATTATGGGCCTTGGCCAACTCCGGGGCATCAGGGTGAAGAGGCCTaGGTCGCTCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVARAWHGYYGPWPTPGHQGEEA*VALQLQ
Trigger: CTGGAGCTGGAGAGCGACCCAGGCCTCTTCACCCTG...ATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCCACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCTCAGGGAGGTGGCGTaGCTCGGGCCTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGLREVA*LGPGMA
Trigger: AGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAG...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACCTGGGGTGGGCGGACTaGAACTCGGCTGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHLGWAD*NSAAAH
Trigger: GTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAG...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGGGCTGCTGGACCCCTaGCTGCCTTGGATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVGLLDP*LPWIGL
Trigger: CAGACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATGGGGCTTGTGCGCATaGACCAGCCGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGWGLCA*TSRLLC
Trigger: GCAGAGGAGGCGGCTGGTTCATGCGCACAAGCCCCA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCCAGCATTGCACCTCTaGTCGGGGCGGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPPALHL*SGRASN
Trigger: GTTGCTGGCCCGCCCCGATCAGAGGTGCAATGCTGG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478368.1
CDS-3UTR GCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCACCAGCCGCCTCCTCTaGACCATCTGTGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVTSRLL*TICVVA
Trigger: GGCAACCACACAGATGGTGCAGAGGAGGCGGCTGGT...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGCTGCGGCCCACACCTaGCGCCAGGTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLAAAHT*RQVFFL
Trigger: GAGGAAGAAGACCTGGCGGCAGGTGTGGGCCGCAGC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGGACTGGAACTCGGCTaGGGCCCACACCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGGLELG*GPHLPP
Trigger: TGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCC...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCGGTCAGGCTTCCGCTaGTTGTGGAGCCGGCCGATG +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLRSGFR*LWSRPM
Trigger: CATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGGTGGTAGGGCTCCCCTaGAGTGGCGAGGCCGATACG +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGVVGLP*SGEADT
Trigger: CGTATCGGCCTCGCCACTGCAGGGGAGCCCTACCAC...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460680.6
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTCTCAGGGAGGTGGCGTaGCTCGGGCCTGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRLREVA*LGPGMA
Trigger: AGCCATGCCAGGCCCGAGCCACGCCACCTCCCTGAG...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCCGATGCTGACCCCTTaGCGCCGCCGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQPMLTP*RRRTEM
Trigger: CATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGGGCTTCCGCTGCTTGTaGAGCCGGCCGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGGFRCL*SRPMLT
Trigger: GGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCC...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCTCACCCCAACCCCACTaGGACACCCTACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVSPQPH*DTLLPT
Trigger: GGTTGGGAGTAGGGTGTCCCAGTGGGGTTGGGGTGA...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGGCTGTGTTGGGGCCTaGGCTCCAGAGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLGCVGA*APEALL
Trigger: CAGCAGTGCCTCTGGAGCCCAGGCCCCAACACAGCC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGGCTGTGTTGGGGCCTaGGCTCCAGAGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLGCVGA*APEALL
Trigger: CAGCAGTGCCTCTGGAGCCCAGGCCCCAACACAGCC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGGAGCCGGCCGATGCTaGCCCCTTGGCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGGAGRC*PLGAAA
Trigger: TGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGGACAGAGGCTCTTCTaGGCCTCAAGCGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLGQRLF*ASSARD
Trigger: GTCCCTGGCGCTTGAGGCTCAGAAGAGCCTCTGTCC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGTCCCAGGTCCACGCTaGTGCAGTTCAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLVPGPR*CSSGAR
Trigger: GCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGAC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGTCCCAGGTCCACGCTaGTGCAGTTCAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGVPGPR*CSSGAR
Trigger: GCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGAC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCTGCAGGGGCCCTGTTTaGTTCCAGCACCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPCRGPV*FQHQRG
Trigger: TCCCCGCTGGTGCTGGAAGCAAACAGGGCCCCTGCA...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCCTTCTCCACTGGGCTaGTGGACCCCTGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPPSPLG*WTPGCL
Trigger: AAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGACCTTCTCCACTGGGCTaGTGGACCCCTGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGPSPLG*WTPGCL
Trigger: AAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGG...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCGGTCAGGCTTCCGCTaGTTGTGGAGCCGGCCGATG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQRSGFR*LWSRPM
Trigger: CATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCCCAACCCAGCCCAGTaGTGGGTCCCTGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGPNPAQ*WVPEFG
Trigger: GCCAAACTCAGGGACCCAGCACTGGGCTGGGTTGGG...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGACAGGGTGAAGAGGCCTaGGTCGCTCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGQGEEA*VALQLQ
Trigger: CTGGAGCTGGAGAGCGACCCAGGCCTCTTCACCCTG...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGGGCTCGGGCCTGGCATaGCTATTATGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGGSGLA*LLWALA
Trigger: GGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCC...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GGGCTGAAACCCTTGGTGAAGTCCTTCATGCGACTCAGGGTGGGTCCCAGGTCCTGCTTCTCAGGGAGGTaGCGTGGCTCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLKPLVKSFMRLRVGPRSCFSGR*RGSGLA
Trigger: TGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCA...GGACCTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGTTTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCGGCTTCCGCTGCTTGTaGAGCCGGCCGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAGFRCL*SRPMLT
Trigger: GGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCC...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGVLTGA*PCRGES
Trigger: GCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGAC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACAGGGACAGGCTGGTaGCTGGGGCTAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPTGTGW*LGLEQQ
Trigger: CTGCTGCTCTAGCCCCAGCCACCAGCCTGTCCCTGT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGCCATGGGGCTGTGTTaGGGCCTGGGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVAMGLC*GLGSRG
Trigger: GCCTCTGGAGCCCAGGCCCCAACACAGCCCCATGGC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGCCAGCATGCCTTCCTaGGCCAGCATGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVASMPS*ASMEIK
Trigger: CTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTCCAACGGGTTGTCTTaGTCCTGCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSNGLS*SCCPPP
Trigger: GGGTGGGGGACAGCAGGATCAAGACAACCCGTTGGA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTCCAACGGGTTGTCTTaGTCCTGCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGSNGLS*SCCPPP
Trigger: GGGTGGGGGACAGCAGGATCAAGACAACCCGTTGGA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGTTGCCCTCAGAGGCTaGAGGGGCCCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLVALRG*RGPVCF
Trigger: GAAGCAAACAGGGCCCCTGCAGCCTCTGAGGGCAAC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCACCATCTGTGTGGTTaGCCTCAGAGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLHHLCG*PQRLQG
Trigger: CCCCTGCAGCCTCTGAGGGCAACCACACAGATGGTG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGCCGCCTCCTCTaGACCATCTGTGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPTSRLL*TICVVA
Trigger: GGCAACCACACAGATGGTGCAGAGGAGGCGGCTGGT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCCTTCTCCACTGGGCTaGTGGACCCCTGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGPSPLG*WTPGCL
Trigger: AAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGGGCTCCAGAGGCACTaGTGGGCCCATTACCCCTTG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQGLQRH*WAHYPL
Trigger: CAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGCCAAAACCCAGCATTaGACCTCTGATCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGAKTQH*TSDRGG
Trigger: CCCGCCCCGATCAGAGGTGCAATGCTGGGTTTTGGC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCAGGGTGAAGAGGCCTaGGTCGCTCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQQGEEA*VALQLQ
Trigger: CTGGAGCTGGAGAGCGACCCAGGCCTCTTCACCCTG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTCTGGCATGGCTATTATaGGCCTTGGCCAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: HATQGGSQVHAAAVQEHALAWLL*ALANSG
Trigger: CCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAG...AGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp GTGAAGTCCTTCATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTGCAGTTCGGCTCGGGCCTGGCATaGCTATTATGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VKSFMRLRVGPRSTLLQFGSGLA*LLWALA
Trigger: GGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCC...GAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATGAAGGACTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGGCGTGGCTCGGGCCTaGCATGGCTATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQGVARA*HGYYGP
Trigger: AGGCCCATAATAGCCATGCCAGGCCCGAGCCACGCC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACATGCTTCTCAGGGAGGTaGCGTGGCTCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTCFSGR*RGSGLA
Trigger: TGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCA...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGAAGGCCGGCAGCCGCTaGACAATGGGAGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGKAGSR*TMGVGL
Trigger: CAACCCCACTCCCATTGTCCAGCGGCTGCCGGCCTT...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCTGTACTCTCATTGCTaGGGGTGGGTGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLLYSHC*GWVRAA
Trigger: CGCAGCCCTCACCCACCCCCAGCAATGAGAGTACAG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTTCTCCACTGGGCTGCTaGACCCCTGGCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTASPLGC*TPGCLG
Trigger: TCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGA...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGVLTGA*PCRGES
Trigger: GCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGAC...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCTCCACAGCCGGCTGTaGAGGAAGCTGCAGTACCTC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLLHSRL*RKLQYL
Trigger: GAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCGCTCTGCTCAGGCCATaGGATCCCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAALLRP*DPSSLL
Trigger: GAGCAGGCTGCTGGGATCCCATGGCCTGAGCAGAGC...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGACTCCAGAGGCACTGCTaGGCCCATTACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGLQRHC*AHYPLA
Trigger: TGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCCATGGGGCTGTGTTaGGGCCTGGGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYAMGLC*GLGSRG
Trigger: GCCTCTGGAGCCCAGGCCCCAACACAGCCCCATGGC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCATCTGGCAGAGGCCATaGGGCTGTGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAIWQRP*GCVGAW
Trigger: CCAGGCCCCAACACAGCCCCATGGCCTCTGCCAGAT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPVGLQH*QLPISR
Trigger: TCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAAC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGATGGACAGAGGAATTaGGAGGTCCTTCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVDGQRN*EVLLGL
Trigger: GAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATGCCTTGGATTGGTCTaGTGGAGGGCGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGCLGLV*WRARNP
Trigger: AGGGTTCCTCGCCCTCCATCAGACCAATCCAAGGCA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR TCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTTGGGACCGTGGCATaGTACAAGGACCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRVGTVA*YKDLGP
Trigger: TGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAAC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGTTGGGACCGTGGCATaGTACAAGGACCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQVGTVA*YKDLGP
Trigger: TGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAAC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACTCCAACGGGTTGTCTTaGTCCTGCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHSNGLS*SCCPPP
Trigger: GGGTGGGGGACAGCAGGATCAAGACAACCCGTTGGA...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCACTAAGGCCATTCTGCTTCTCAGGGAGGTGGCGTGGCTCGGGCCTGGCATGGGCACTAAGGCCATTCTaGTTCTCAGGGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALRPFCFSGRWRGSGLAWALRPF*FSGRWR
Trigger: ACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGC...CCATGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCCAGCGGGGACTTGTTaGTGGCTGACTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLPAGTC*WLTWTP
Trigger: AGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTGTTGCCCTCAGAGGCTaGAGGGGCCCTGTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAVALRG*RGPVCF
Trigger: GAAGCAAACAGGGCCCCTGCAGCCTCTGAGGGCAAC...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGACGCACGGAGATGTTCTaGTCCACTAGGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGRTEMF*STRLAS
Trigger: GCTGGCCAACCTAGTGGAGCAGAACATCTCCGTGCG...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTATMGLI*RVRPQG
Trigger: GCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGT...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQATMGLI*RVRPQG
Trigger: GCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGCSTSL*PNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCTGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLCSTSL*PNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCA...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAAGAAGGGCCAGGTCCTaGTGCTCCACAGCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTRRARS*CSTAGC
Trigger: ACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCTTCT...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAAGAAGGGCCAGGTCCTaGTGCTCCACAGCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVRRARS*CSTAGC
Trigger: ACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCTTCT...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGGGCTCCAGAGGCACTaGTGGGCCCATTACCCCTTG +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVGLQRH*WAHYPL
Trigger: CAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCTGGCATGGCTATTATaGGCCTTGGCCAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGLAWLL*ALANSG
Trigger: CCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAG...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTCGGGCCTGGCATaGCTATTATGGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGSGLA*LLWALA
Trigger: GGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGGCGTGGCTCGGGCCTaGCATGGCTATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVGVARA*HGYYGP
Trigger: AGGCCCATAATAGCCATGCCAGGCCCGAGCCACGCC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTGACCCCTGGCTGCCTTaGATTGGTCTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTADPWLP*IGLMEG
Trigger: GCCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTC...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGACCCCTGGCTGCCTTaGATTGGTCTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRDPWLP*IGLMEG
Trigger: GCCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGCTGGACCCCTaGCTGCCTTGGATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGLLDP*LPWIGL
Trigger: CAGACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACCGATGCTGACCCCTTaGCGCCGCCGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGPMLTP*RRRTEM
Trigger: CATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTCCACAGCCGGCTGTaGAGGAAGCTGCAGTACCTC +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGLHSRL*RKLQYL
Trigger: GAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGACAGGGACAGGCTGGTaGCTGGGGCTAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMTGTGW*LGLEQQ
Trigger: CTGCTGCTCTAGCCCCAGCCACCAGCCTGTCCCTGT...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGTCACCCCAACCCCACTaGGACACCCTACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGSPQPH*DTLLPT
Trigger: GGTTGGGAGTAGGGTGTCCCAGTGGGGTTGGGGTGA...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTGGCATCAGGTCCTCTaGAACACAGGGGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGWHQVL*NTGAPT
Trigger: CGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCCTCCAGAGGCACTGCTaGGCCCATTACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQALQRHC*AHYPLA
Trigger: TGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATCTGGCAGAGGCCATaGGGCTGTGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVIWQRP*GCVGAW
Trigger: CCAGGCCCCAACACAGCCCCATGGCCTCTGCCAGAT...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp GCACTAAGGCCATTCTGCTTCTCAGGGAGGTGGCGTGGCTCGGGCCTGGCATGGACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: ALRPFCFSGRWRGSGLAWTLSKA*VAQELG
Trigger: ACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGT...CCATGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR TCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCTCCTCAGGCAGCTGTaGCTCTTGAGACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLLLRQL*LLRLVG
Trigger: ACCCACAAGTCTCAAGAGTCACAGCTGCCTGAGGAG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTAGCGCAGTGGCGAGTTaGAAGCACTGCCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTASAVAS*KHCRSQ
Trigger: CTGAGATCGGCAGTGCTTTCAACTCGCCACTGCGCT...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGCCAGCATGCCTTCCTaGGCCAGCATGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPASMPS*ASMEIK
Trigger: CTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGCCAGCATGCCTTCCTaGGCCAGCATGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGASMPS*ASMEIK
Trigger: CTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAGGAGCCGGCCGATGCTaGCCCCTTGGCGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKGAGRC*PLGAAA
Trigger: TGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCC...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTAGGGCCACAACACTaGAGGCGAAGAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLLGPQH*RRRALE
Trigger: TTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCTAGGGCCACAACACTaGAGGCGAAGAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPLGPQH*RRRALE
Trigger: TTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACGTGCCTTGCAGAGGCTaGGGAAACTGGAGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHVPCRG*GNWSSR
Trigger: CCTGCTACTCCAGTTTCCTCAGCCTCTGCAAGGCAC...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGGCCTGGCCTCATACTTaGTCCTGCGGTCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGAWPHT*SCGRAP
Trigger: TGGTGCCCGACCGCAGGATCAAGTATGAGGCCAGGC...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460680.6
CDS-3UTR GCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAGCACTAAGGCCATTCTaGTTCTCAGGGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGALRPF*FSGRWR
Trigger: ACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGC...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCCAGCGGGGACTTGTTaGTGGCTGACTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQPAGTC*WLTWTP
Trigger: AGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCACCATCTGTGTGGTTaGCCTCAGAGGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMHHLCG*PQRLQG
Trigger: CCCCTGCAGCCTCTGAGGGCAACCACACAGATGGTG...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTGCTGCGGCCCACACCTaGCGCCAGGTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLAAAHT*RQVFFL
Trigger: GAGGAAGAAGACCTGGCGGCAGGTGTGGGCCGCAGC...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATCATCATCTGAGTACTaGTGGGGTGGGCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGSSSEY*WGGRTG
Trigger: TCCAGTCCGCCCACCCCAGCAGTACTCAGATGATGA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGCSTDS*PSAEPL
Trigger: GAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGCSTDS*PSAEPL
Trigger: GAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCGAGTGTGTGGGCACTaGCACAGCCGGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLRVCGH*HSRTPS
Trigger: GCTGGGAGTCCGGCTGTGGCAGTGCCCACACACTCG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCACGGTTGTAGCGTATaGAGTCAACACGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLHGCSV*SQHAAG
Trigger: GCCTGCTGCGTGTTGACTGCATACGCTACAACCGTG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACGGTCAGGCTTCCGCTaGTTGTGGAGCCGGCCGATG +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGRSGFR*LWSRPM
Trigger: CATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGATGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATG +
Preference number: 4 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGCPNSR*CLLSTM
Trigger: CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACTGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHCSTSL*PNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCA...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTAGGGCCAGGTCCTGCTaGTCCACAGCCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLRARSC*STAGCG
Trigger: TCCACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCT...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATAGAAGGGCCAGGTCCTaGTGCTCCACAGCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYRRARS*CSTAGC
Trigger: ACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCTTCT...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGCCCAACCCAGCCCAGTaGTGGGTCCCTGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGPNPAQ*WVPEFG
Trigger: GCCAAACTCAGGGACCCAGCACTGGGCTGGGTTGGG...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp TCCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATGAGTTGCGGCTATTATGGGCCTTaGCCAACTCCGGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SQVHAAAVQEHAQQGMSCGYYGP*PTPGHC
Trigger: GCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCC...GCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp GTCAATGGGGTAGACCTTCAGCCCATCCAGCTCAAAGAGCCGGCCTGTGATAGGGGCGTGGCTCGGGCCTaGCATGGCTATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: VNGVDLQPIQLKEPACDRGVARA*HGYYGP
Trigger: AGGCCCATAATAGCCATGCCAGGCCCGAGCCACGCC...CCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAAGGTCTACCCCATTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATCTGCACCATCTGTGTaGTTGCCCTCAGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGSAPSV*LPSEAA
Trigger: TGCAGCCTCTGAGGGCAACCACACAGATGGTGCAGA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAGGCCGGCAGCCGCTaGACAATGGGAGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGKAGSR*TMGVGL
Trigger: CAACCCCACTCCCATTGTCCAGCGGCTGCCGGCCTT...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGTCTCATTGCTGGGGGTaGGTGAGGGCTGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMSHCWG*VRAASV
Trigger: CACACTCGCAGCCCTCACCCACCCCCAGCAATGAGA...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGATAGGCGAGCGCAGTaGCGAGTTGAAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQDRRAQ*RVESTA
Trigger: GGCAGTGCTTTCAACTCGCCACTGCGCTCGCCTATC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCGATGCTGACCCCTTaGCGCCGCCGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPMLTP*RRRTEM
Trigger: CATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGVLTGA*PCRGES
Trigger: GCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGAC...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCATGATACAAGGACCTaGGCCCACCAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQHDTRT*AHQDSS
Trigger: GGAGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCTCTGCTCAGGCCATaGGATCCCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYALLRP*DPSSLL
Trigger: GAGCAGGCTGCTGGGATCCCATGGCCTGAGCAGAGC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTCCTCAGGCAGCTGTaGCTCTTGAGACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGLLRQL*LLRLVG
Trigger: ACCCACAAGTCTCAAGAGTCACAGCTGCCTGAGGAG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTTGGGGTGAACCCCATTaGGGCTGCTGCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCWGEPH*GCCLEA
Trigger: AGCCTCCAGGCAGCAGCCTCAATGGGGTTCACCCCA...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACTCTCAGCCAAGACGTTaGTGGTGTTGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHSQPRR*WCWAAA
Trigger: TGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGA...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCTCAGCCAAGACGTTaGTGGTGTTGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASQPRR*WCWAAA
Trigger: TGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGA...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCTCTCTACCTCCTCCTTaGGGCACGCCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPSLPPP*GTPHSL
Trigger: CAAACTATGAGGCGTGCCTCAAGGAGGAGGTAGAGA...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCGCCAGCATGCCTTCCTaGGCCAGCATGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAASMPS*ASMEIK
Trigger: CTTTATCTCCATGCTGGCTCAGGAAGGCATGCTGGC...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCCAGTGCTGGGTCCCTaGGTTTGGCACTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMPVLGP*VWHSPK
Trigger: CTTAGGAGAGTGCCAAACTCAGGGACCCAGCACTGG...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCTATGGAGAGCAGTCTTaGACAGCCTGGCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVYGEQS*TAWLEQ
Trigger: TTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATA...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGTGCCTTGCAGAGGCTaGGGAAACTGGAGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMVPCRG*GNWSSR
Trigger: CCTGCTACTCCAGTTTCCTCAGCCTCTGCAAGGCAC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGTGCCTTGCAGAGGCTaGGGAAACTGGAGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVVPCRG*GNWSSR
Trigger: CCTGCTACTCCAGTTTCCTCAGCCTCTGCAAGGCAC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CAGCTCAAAGAGCCGGCCTGTGATAGGCACATAGCTGACAAAGTGGAACGCCTCGTCCCAGGTCCACGCTaGTGCAGTTCAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: QLKEPACDRHIADKVERLVPGPR*CSSGAR
Trigger: GCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGAC...GAGGCGTTCCACTTTGTCAGCTATGTGCCTATCACAGGCCGGCTCTTTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR GCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGACCAACTCCGGGGCATTaGCAATCGCATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGPTPGH*QSHILC
Trigger: GCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGG...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGATGCAGGGGCCCTGTTTaGTTCCAGCACCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGCRGPV*FQHQRG
Trigger: TCCCCGCTGGTGCTGGAAGCAAACAGGGCCCCTGCA...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCATCATCTGAGTACTaGTGGGGTGGGCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASSSEY*WGGRTG
Trigger: TCCAGTCCGCCCACCCCAGCAGTACTCAGATGATGA...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCTTGATGGTGTTGGGCTaGAGCACTGACAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLLMVLG*STDSCP
Trigger: TGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAA...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGCGAGTGTGTGGGCACTaGCACAGCCGGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLRVCGH*HSRTPS
Trigger: GCTGGGAGTCCGGCTGTGGCAGTGCCCACACACTCG...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTACGCACGGAGATGTTCTaGTCCACTAGGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVRTEMF*STRLAS
Trigger: GCTGGCCAACCTAGTGGAGCAGAACATCTCCGTGCG...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACACCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGTGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQCPNSR*CLLSTM
Trigger: CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACAGGGCCAGGTCCTGCTaGTCCACAGCCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHRARSC*STAGCG
Trigger: TCCACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCT...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCAGTTCCCACATGCTCTaGTCAGGCCATGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASSHML*SGHGIP
Trigger: TGGGATCCCATGGCCTGAGCAGAGCATGTGGGAACT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGGCTATTATGGGCCTTaGCCAACTCCGGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVGYYGP*PTPGHC
Trigger: GCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGTGCTTCTCAGGGAGGTaGCGTGGCTCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLCFSGR*RGSGLA
Trigger: TGCCAGGCCCGAGCCACGCCACCTCCCTGAGAAGCA...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTAGGGCCCATGGTCAATaGGGTAGACCTTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTARAHGQ*GRPSAH
Trigger: ATGGGCTGAAGGTCTACCCCATTGACCATGGGCCCT...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGTGTTGCTGGCTGACTTaGACTCCTCAGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGCCWLT*TPQAAV
Trigger: CACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACA...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGCGGGGACTTGTTGCTaGCTGACTTGGACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMAGTCC*LTWTPQ
Trigger: CTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGTCATCTGAGTACTGCTaGGGTGGGCGGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGSSEYC*GGRTGT
Trigger: AGTTCCAGTCCGCCCACCCCAGCAGTACTCAGATGA...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGATAGGCGAGCGCAGTaGCGAGTTGAAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMDRRAQ*RVESTA
Trigger: GGCAGTGCTTTCAACTCGCCACTGCGCTCGCCTATC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACACTGGCTGCCTTGGATTaGTCTGATGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTLAALD*SDGGRG
Trigger: TCCTCGCCCTCCATCAGACCAATCCAAGGCAGCCAG...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGGGCTGCTGGACCCCTaGCTGCCTTGGATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCGLLDP*LPWIGL
Trigger: CAGACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGTGCCAGCAGCTCCTTaGGTGAGTATTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQVPAAP*VSISPH
Trigger: GTGGGGAGAAATACTCACCCAAGGAGCTGCTGGCAC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGGCTTCCGCTGCTTGTaGAGCCGGCCGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHGFRCL*SRPMLT
Trigger: GGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPTMEGM*PGSSHS
Trigger: GGAATGGGAGGAACCAGGCCACATTCCTTCCATCGT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACACATGATACAAGGACCTaGGCCCACCAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTHDTRT*AHQDSS
Trigger: GGAGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATG...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGTAATACTGAGGGGCTaGACAGAGGCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPVILRG*TEALLS
Trigger: GCTCAGAAGAGCCTCTGTCCAGCCCCTCAGTATTAC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGCAGGAAGAGCTGAGTaGTGCCAGCTTCCTATAAGC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPAGRAE*CQLPIS
Trigger: GCTTATAGGAAGCTGGCACCACTCAGCTCTTCCTGC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGTGGCATCAGGTCCTCTaGAACACAGGGGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMWHQVL*NTGAPT
Trigger: CGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCA...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGCCCATTACCCCTTaGCATCAGGTCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTGPITP*HQVLWN
Trigger: GTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCC...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHTLSKA*VAQELG
Trigger: ACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGT...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACGCCTCTAGTACTGTCTaGCGGTTCACCTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHASSTV*RFTFST
Trigger: TGTGCTGAAGGTGAACCGTCAGACAGTACTAGAGGC...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGACTTGTTGCTGGCTaGCTTGGACTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYGLVAG*LGLLRQ
Trigger: CTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGTGGGGTGAACCCCATTaGGGCTGCTGCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FRPIARATTLKAKSPRTLWGEPH*GCCLEA
Trigger: AGCCTCCAGGCAGCAGCCTCAATGGGGTTCACCCCA...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAGCGCAGTGGCGAGTTaGAAGCACTGCCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGSAVAS*KHCRSQ
Trigger: CTGAGATCGGCAGTGCTTTCAACTCGCCACTGCGCT...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACCAGCAGCTCCTTGGGTaGGTATTTCTCCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHQQLLG*VFLPTQ
Trigger: TTGAGTGGGGAGAAATACTCACCCAAGGAGCTGCTG...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGTCTCTACCTCCTCCTTaGGGCACGCCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQSLPPP*GTPHSL
Trigger: CAAACTATGAGGCGTGCCTCAAGGAGGAGGTAGAGA...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCTCTACCTCCTCCTTaGGGCACGCCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASLPPP*GTPHSL
Trigger: CAAACTATGAGGCGTGCCTCAAGGAGGAGGTAGAGA...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATCCAGTGCTGGGTCCCTaGGTTTGGCACTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYPVLGP*VWHSPK
Trigger: CTTAGGAGAGTGCCAAACTCAGGGACCCAGCACTGG...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTCAGTTCACAGGCCACTaGACAGTTCCCACATGCTCT +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAQFTGH*TVPTCS
Trigger: AGAGCATGTGGGAACTGTTCAGTGGCCTGTGAACTG...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGGGACAGAGGCTCTTCTaGGCCTCAAGCGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FRPIARATTLKAKSPRTLGQRLF*ASSARD
Trigger: GTCCCTGGCGCTTGAGGCTCAGAAGAGCCTCTGTCC...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGATGTCTCTGCTACCCCTaGGAGGGAGACATGGTAATA +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGCLCYP*EGDMVI
Trigger: TATTACCATGTCTCCCTCTCAGGGGTAGCAGAGACA...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTGTCTCTGCTACCCCTaGGAGGGAGACATGGTAATA +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLCLCYP*EGDMVI
Trigger: TATTACCATGTCTCCCTCTCAGGGGTAGCAGAGACA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCAGTAGCAGGAAGAGCTaGGTGGTGCCAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASSRKS*VVPASY
Trigger: ATAGGAAGCTGGCACCACTCAGCTCTTCCTGCTACT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCCAGGTCCACGCTGCTaGAGTTCAGGAGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLPGPRC*SSGARS
Trigger: TGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCCCAACTCCGGGGCATTaGCAATCGCATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAPTPGH*QSHILC
Trigger: GCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGG...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTCCATGGTCCGCACTaGACTAAGGCCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGLHGPH*TKAILL
Trigger: AAGCAGAATGGCCTTAGTGCAGTGCGGACCATGGAG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTACACGGTTGTAGCGTATaGAGTCAACACGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVHGCSV*SQHAAG
Trigger: GCCTGCTGCGTGTTGACTGCATACGCTACAACCGTG...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCACGGTTGTAGCGTATaGAGTCAACACGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMHGCSV*SQHAAG
Trigger: GCCTGCTGCGTGTTGACTGCATACGCTACAACCGTG...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGTCCCCGTCTTCTCTCTaGTGTCCGTGGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGSPSSL*CPWLPR
Trigger: TCGTGGAAGCCACGGACAGCAGAGAGAAGACGGGGA...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATTCCCCGTCTTCTCTCTaGTGTCCGTGGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYSPSSL*CPWLPR
Trigger: TCGTGGAAGCCACGGACAGCAGAGAGAAGACGGGGA...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCCAACCCAGCCCAGTaGTGGGTCCCTGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPNPAQ*WVPEFG
Trigger: GCCAAACTCAGGGACCCAGCACTGGGCTGGGTTGGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAAGTTCCCACATGCTCTaGTCAGGCCATGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVSSHML*SGHGIP
Trigger: TGGGATCCCATGGCCTGAGCAGAGCATGTGGGAACT...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGGAGTTGCACAAGAGTTaGGTATCAGCTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLELHKS*VSAGGQ
Trigger: TTGCCCACCAGCTGATACCCAACTCTTGTGCAACTC...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCTTCACCACTAGCTTaGGTTTGTTGGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQASPLA*VCWEGC
Trigger: ACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGATCTCATTGCTGGGGGTaGGTGAGGGCTGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGSHCWG*VRAASV
Trigger: CACACTCGCAGCCCTCACCCACCCCCAGCAATGAGA...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCTGTACTCTCATTGCTaGGGGTGGGTGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLLYSHC*GWVRAA
Trigger: CGCAGCCCTCACCCACCCCCAGCAATGAGAGTACAG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGACCCCTGGCTGCCTTaGATTGGTCTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCDPWLP*IGLMEG
Trigger: GCCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACTCTCCACTGGGCTGCTaGACCCCTGGCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHSPLGC*TPGCLG
Trigger: TCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGA...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FRPIARATTLKAKSPRTLATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLLGPCS*DRGMIQ
Trigger: TTGTATCATGCCACGGTCCCAACTACAGGGTCCTAG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLLGPCS*DRGMIQ
Trigger: TTGTATCATGCCACGGTCCCAACTACAGGGTCCTAG...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGACAGGGACAGGCTGGTaGCTGGGGCTAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGTGTGW*LGLEQQ
Trigger: CTGCTGCTCTAGCCCCAGCCACCAGCCTGTCCCTGT...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGGCTCTGCTCAGGCCATaGGATCCCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLALLRP*DPSSLL
Trigger: GAGCAGGCTGCTGGGATCCCATGGCCTGAGCAGAGC...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTAATACTGAGGGGCTaGACAGAGGCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRVILRG*TEALLS
Trigger: GCTCAGAAGAGCCTCTGTCCAGCCCCTCAGTATTAC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCVGLQH*QLPISR
Trigger: TCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAAC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCAGCAGCTCCTTGGGTaGGTATTTCTCCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMQQLLG*VFLPTQ
Trigger: TTGAGTGGGGAGAAATACTCACCCAAGGAGCTGCTG...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGTCTCTACCTCCTCCTTaGGGCACGCCTCATAGTTTG +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMSLPPP*GTPHSL
Trigger: CAAACTATGAGGCGTGCCTCAAGGAGGAGGTAGAGA...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGTTGGGACCGTGGCATaGTACAAGGACCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHVGTVA*YKDLGP
Trigger: TGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAAC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR TCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTACAGTTCACAGGCCACTaGACAGTTCCCACATGCTCT +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVQFTGH*TVPTCS
Trigger: AGAGCATGTGGGAACTGTTCAGTGGCCTGTGAACTG...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTATGGAGAGCAGTCTTaGACAGCCTGGCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLYGEQS*TAWLEQ
Trigger: TTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTGTCTCTGCTACCCCTaGGAGGGAGACATGGTAATA +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQACLCYP*EGDMVI
Trigger: TATTACCATGTCTCCCTCTCAGGGGTAGCAGAGACA...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACTTCACCTTCAGCACATaGAGCCTGGCCTCATACTTG +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHFTFST*SLASYL
Trigger: CAAGTATGAGGCCAGGCTGCATGTGCTGAAGGTGAA...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCGCACGGAGATGTTCTaGTCCACTAGGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLRTEMF*STRLAS
Trigger: GCTGGCCAACCTAGTGGAGCAGAACATCTCCGTGCG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTCGCACGGAGATGTTCTaGTCCACTAGGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCRTEMF*STRLAS
Trigger: GCTGGCCAACCTAGTGGAGCAGAACATCTCCGTGCG...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTGAGTTGCACAAGAGTTaGGTATCAGCTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAELHKS*VSAGGQ
Trigger: TTGCCCACCAGCTGATACCCAACTCTTGTGCAACTC...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTCTGGCATGGCTATTATaGGCCTTGGCCAACTCCGGG +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCLAWLL*ALANSG
Trigger: CCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAG...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAGCTGGACAATGGGAGTaGGGTTGGGGTGAACCCCAT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGAGQWE*GWGEPH
Trigger: ATGGGGTTCACCCCAACCCCACTCCCATTGTCCAGC...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCTTGTGGGTCCTTCTCTaGTCATCAATCTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: TLVRATRQEWAAESGPAVLWVLL*SSILNF
Trigger: GAAGTTCAAGATTGATGACCAGAGAAGGACCCACAA...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGCTCCACAGCCGGCTGTaGAGGAAGCTGCAGTACCTC +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLLHSRL*RKLQYL
Trigger: GAGGTACTGCAGCTTCCTCCACAGCCGGCTGTGGAG...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRLGPCS*DRGMIQ
Trigger: TTGTATCATGCCACGGTCCCAACTACAGGGTCCTAG...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGCAGGAAGAGCTGAGTaGTGCCAGCTTCCTATAAGC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMAGRAE*CQLPIS
Trigger: GCTTATAGGAAGCTGGCACCACTCAGCTCTTCCTGC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAGGGCCCATTACCCCTTaGCATCAGGTCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGGPITP*HQVLWN
Trigger: GTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCC...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAGCCATGGGGCTGTGTTaGGGCCTGGGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKAMGLC*GLGSRG
Trigger: GCCTCTGGAGCCCAGGCCCCAACACAGCCCCATGGC...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTGAGTTGCACAAGAGTTaGGTATCAGCCCTGACATTT +
Preference number: 4 (lower is better)
Translates to: HATQGGSQVHAAAVQEHAELHKS*VSALTF
Trigger: AAATGTCAGGGCTGATACCCAACTCTTGTGCAACTC...AGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR TCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTTCTCAGCCAAGACGTTaGTGGTGTTGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLSQPRR*WCWAAA
Trigger: TGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGA...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCAGTGCTGGGTCCCTaGGTTTGGCACTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPVLGP*VWHSPK
Trigger: CTTAGGAGAGTGCCAAACTCAGGGACCCAGCACTGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTTATGGAGAGCAGTCTTaGACAGCCTGGCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAYGEQS*TAWLEQ
Trigger: TTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATA...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCACTGCCATCAGGTTaGAGCGGATGTCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPLPSG*SGCRGR
Trigger: CCTACCACGACATCCGCTTCAACCTGATGGCAGTGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460680.6
CDS-3UTR TCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTAATAGGCAGCTTGGGTaGGTATTTCTCCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRNRQLG*VFLPTQ
Trigger: TTGAGTGGGGAGAAATACTCACCCAAGCTGCCTATT...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478368.1
CDS-3UTR GCA 90 bp GACCTTCAGCCCATCCAGCTCAAAGAGCCGGCCTGTGATAGGCACATAGCTGACCCAACTCCGGGGCATTaGCAATCGCATATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: DLQPIQLKEPACDRHIADPTPGH*QSHILC
Trigger: GCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGG...GTCAGCTATGTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR GCA 90 bp AATGGGGTAGACCTTCAGCCCATCCAGCTCAAAGAGCCGGCCTGTGATAGGCACCTCCATGGTCCGCACTaGACTAAGGCCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NGVDLQPIQLKEPACDRHLHGPH*TKAILL
Trigger: AAGCAGAATGGCCTTAGTGCAGTGCGGACCATGGAG...GTGCCTATCACAGGCCGGCTCTTTGAGCTGGATGGGCTGAAGGTCTACCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCTCATACTTGATCCCTaGAGTGGCGAGGCCGATACG +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLLILDP*SGEADT
Trigger: CGTATCGGCCTCGCCACTGCAGGGATCAAGTATGAG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296288.9
CDS-3UTR GCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCAGAGTTGGTGTTCTaGACGTCATCCTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYAELVF*TSSSSS
Trigger: TGACGAGGAGGATGACGTGCAGAACACCAACTCTGC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAACGGTCAGGCTTCCGCTaGTTGTGGAGCCGGCCGATG +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKRSGFR*LWSRPM
Trigger: CATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCG...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACCCCAACTCCAGATGCTaGCTCCTGAGCACTATGGGG +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHPNSRC*LLSTMG
Trigger: CCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGG...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGTGCAGTACCTCGCTGTaGCCCAACTCCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLCSTSL*PNSRCC
Trigger: GCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCA...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAGGGCCAGGTCCTGCTaGTCCACAGCCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKRARSC*STAGCG
Trigger: TCCACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCACCAGGACAGCTAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PCSWDRGMIQGPGPTRTAKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...AGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGGAGTTGGGTATCAGCTaGTGGGCAAAGAACATGTTA +
Preference number: 4 (lower is better)
Translates to: QMLPPEHYGADLPCQASGELGIS*WAKNML
Trigger: TAACATGTTCTTTGCCCACCAGCTGATACCCAACTC...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGGGCCCATGGTCAATaGGGTAGACCTTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGRAHGQ*GRPSAH
Trigger: ATGGGCTGAAGGTCTACCCCATTGACCATGGGCCCT...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGCTGGACAATGGGAGTaGGGTTGGGGTGAACCCCAT +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGAGQWE*GWGEPH
Trigger: ATGGGGTTCACCCCAACCCCACTCCCATTGTCCAGC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCCCTGCATGGGGGACTTaGCATAATTGTGATTGTCTA +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPPAWGT*HNCDCL
Trigger: TAGACAATCACAATTATGCCAAGTCCCCCATGCAGG...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACCTTCTTCCTCCTGCATaGGGGACTTGGCATAATTGT +
Preference number: 4 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHLLPPA*GTWHNC
Trigger: ACAATTATGCCAAGTCCCCCATGCAGGAGGAAGAAG...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACTGGGGTGGGCGGACTaGAACTCGGCTGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLGWAD*NSAAAH
Trigger: GTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTTCATCTGAGTACTGCTaGGGTGGGCGGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLSSEYC*GGRTGT
Trigger: AGTTCCAGTCCGCCCACCCCAGCAGTACTCAGATGA...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGATAGGCGAGCGCAGTaGCGAGTTGAAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGDRRAQ*RVESTA
Trigger: GGCAGTGCTTTCAACTCGCCACTGCGCTCGCCTATC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAACCGATGCTGACCCCTTaGCGCCGCCGCACGGAGATG +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKPMLTP*RRRTEM
Trigger: CATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGG...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYTMEGM*PGSSHS
Trigger: GGAATGGGAGGAACCAGGCCACATTCCTTCCATCGT...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: PPEHYGADLPCQASGHDGNMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCATGATACAAGGACCTaGGCCCACCAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRPIARATTLKAKSPRTLHDTRT*AHQDSS
Trigger: GGAGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGAACCCAGCCCAGTGCTaGGTCCCTGAGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLNPAQC*VPEFGT
Trigger: AGTGCCAAACTCAGGGACCCAGCACTGGGCTGGGTT...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGAACCCAGCCCAGTGCTaGGTCCCTGAGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGNPAQC*VPEFGT
Trigger: AGTGCCAAACTCAGGGACCCAGCACTGGGCTGGGTT...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCATAAAGGGGCCTGCTTaGATCACCTTTTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPIKGPA*ITFFKA
Trigger: GGCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTAT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CAA 72 bp CCAATCGCATATCCTTTGCTCTCAGGGCTGAAACCCTaGGTGAAGTCCTTCATGCGACTCAGGGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PIAYPLLSGLKP*VKSFMRLRVGP
Trigger: GGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR TCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAGCCTCTAGTACTGTCTaGCGGTTCACCTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGASSTV*RFTFST
Trigger: TGTGCTGAAGGTGAACCGTCAGACAGTACTAGAGGC...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAATGGGGCTTGTGCGCATaGACCAGCCGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKWGLCA*TSRLLC
Trigger: GCAGAGGAGGCGGCTGGTTCATGCGCACAAGCCCCA...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACCTTCTGGGACTCTTTaGGCTTCTCAGCCAAGACGT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGPSGTL*ASQPRR
Trigger: ACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTCAGTTCACAGGCCACTaGACAGTTCCCACATGCTCT +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCQFTGH*TVPTCS
Trigger: AGAGCATGTGGGAACTGTTCAGTGGCCTGTGAACTG...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCTAGGGCCACAACACTaGAGGCGAAGAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGLGPQH*RRRALE
Trigger: TTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTAGCAGGAAGAGCTaGGTGGTGCCAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGSSRKS*VVPASY
Trigger: ATAGGAAGCTGGCACCACTCAGCTCTTCCTGCTACT...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CTCAGGGCTGAAACCCTTGGTGAAGTCCTTCATGCGACTCAGGGTGGGTCCCAGCAGCAAGGCATGAGTTaGACAAGAGTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: LRAETLGEVLHATQGGSQQQGMS*TRVGYQ
Trigger: CTGATACCCAACTCTTGTGCAACTCATGCCTTGCTG...CTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR GCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACTCCATGGTCCGCACTaGACTAAGGCCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGLHGPH*TKAILL
Trigger: AAGCAGAATGGCCTTAGTGCAGTGCGGACCATGGAG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCGTTACTCTTATCAGCTaGTGCAGAGCCTCTAGTACT +
Preference number: 4 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAVTLIS*CRASST
Trigger: AGTACTAGAGGCTCTGCAGCAGCTGATAAGAGTAAC...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGGACTGGAACTCGGCTaGGGCCCACACCTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGGLELG*GPHLPP
Trigger: TGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCC...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTTTGATGGTGTTGGGCTaGAGCACTGACAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCLMVLG*STDSCP
Trigger: TGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAA...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGGCTGTGGAGGAAGCTaGAGTACCTCGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTGCGGS*STSLCP
Trigger: GGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGTAAAATATATATTCTaGTGCCCAGGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQVKYIF*CPGRRA
Trigger: GGCCCTTCTGCCTGGGCAGCAGAATATATATTTTAC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGGGCTCCAGAGGCACTaGTGGGCCCATTACCCCTTG +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTGLQRH*WAHYPL
Trigger: CAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGCTTCACCACTAGCTTaGGTTTGTTGGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCASPLA*VCWEGC
Trigger: ACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGGTGCCAGCAGCTCCTTaGGTGAGTATTTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLVPAAP*VSISPH
Trigger: GTGGGGAGAAATACTCACCCAAGGAGCTGCTGGCAC...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTVLTGA*PCRGES
Trigger: GCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGAC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRNMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTACCTAGAACCTTGCTATaGAGAGCAGTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVPRTLL*RAVLNS
Trigger: GCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGG...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAATCTGGCAGAGGCCATaGGGCTGTGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKIWQRP*GCVGAW
Trigger: CCAGGCCCCAACACAGCCCCATGGCCTCTGCCAGAT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGATAAAGGGGCCTGCTTaGATCACCTTTTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQIKGPA*ITFFKA
Trigger: GGCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTAT...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CAA 72 bp AGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTaGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: RATTLKAKSPRT*LWRAVLNSLAR
Trigger: TCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCTTCTGGGACTCTTTaGGCTTCTCAGCCAAGACGT +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPSGTL*ASQPRR
Trigger: ACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACAGTAGCAGGAAGAGCTaGGTGGTGCCAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHSSRKS*VVPASY
Trigger: ATAGGAAGCTGGCACCACTCAGCTCTTCCTGCTACT...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGTTACTCTTATCAGCTaGTGCAGAGCCTCTAGTACT +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVVTLIS*CRASST
Trigger: AGTACTAGAGGCTCTGCAGCAGCTGATAAGAGTAAC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGCAGAGTTGGTGTTCTaGACGTCATCCTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHAELVF*TSSSSS
Trigger: TGACGAGGAGGATGACGTGCAGAACACCAACTCTGC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTGCACGCCTCATAGTTTaGAATCTCAGCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLARLIV*NLSLHT
Trigger: TGTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGC...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAACTATGGGGCTGATCTaGCGTGTCAGGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKTMGLI*RVRPQG
Trigger: GCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAAGGGCCAGGTCCTGCTaGTCCACAGCCGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGRARSC*STAGCG
Trigger: TCCACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCT...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGTAAAATATATATTCTaGTGCCCAGGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMVKYIF*CPGRRA
Trigger: GGCCCTTCTGCCTGGGCAGCAGAATATATATTTTAC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGTAAAATATATATTCTaGTGCCCAGGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVVKYIF*CPGRRA
Trigger: GGCCCTTCTGCCTGGGCAGCAGAATATATATTTTAC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTTTGGGTATCAGCTGGTaGGCAAAGAACATGTTATTC +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRLGISW*AKNMLF
Trigger: GAATAACATGTTCTTTGCCCACCAGCTGATACCCAA...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGTTGTGGGTCCTTCTCTaGTCATCAATCTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQLWVLL*SSILNF
Trigger: GAAGTTCAAGATTGATGACCAGAGAAGGACCCACAA...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGCCACACGGCAAGAGTaGGCTGCAGAGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKATRQE*AAESGP
Trigger: TGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATCCTGGACTCTCCAGCTaGGACTATTCAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYPGLSS*DYSVIL
Trigger: CAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMNMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACATCACCCCAACCCCACTaGGACACCCTACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTSPQPH*DTLLPT
Trigger: GGTTGGGAGTAGGGTGTCCCAGTGGGGTTGGGGTGA...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATCCTAGAACCTTGCTATaGAGAGCAGTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYPRTLL*RAVLNS
Trigger: GCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGG...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACAATAAAGGGGCCTGCTTaGATCACCTTTTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTIKGPA*ITFFKA
Trigger: GGCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTAT...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGGACTTGTTGCTGGCTaGCTTGGACTCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTGLVAG*LGLLRQ
Trigger: CTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKVGLQH*QLPISR
Trigger: TCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAAC...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTTCTGGTCATCAATCTTaGACTTCTTCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRSGHQS*TSSSSL
Trigger: TAGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGA...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTCAGCAAGGCATGAGTTaGACAAGAGTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCQQGMS*TRVGYQ
Trigger: CTGATACCCAACTCTTGTGCAACTCATGCCTTGCTG...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTCAGCAAGGCATGAGTTaGACAAGAGTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLQQGMS*TRVGYQ
Trigger: CTGATACCCAACTCTTGTGCAACTCATGCCTTGCTG...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAATCCCCGTCTTCTCTCTaGTGTCCGTGGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKSPSSL*CPWLPR
Trigger: TCGTGGAAGCCACGGACAGCAGAGAGAAGACGGGGA...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGCACGCCTCATAGTTTaGAATCTCAGCCTCCACACA +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGARLIV*NLSLHT
Trigger: TGTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAAGAAGGGCCAGGTCCTaGTGCTCCACAGCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGRRARS*CSTAGC
Trigger: ACAGCCGGCTGTGGAGCAGCAGGACCTGGCCCTTCT...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTAAATATATATTCTGCTaGCCAGGCAGAAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLKYIFC*PGRRAR
Trigger: CCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTT...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGCGGTCGGGCACCACTaGCATCAGGTTGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKAVGHH*HQVEAD
Trigger: ATCCGCTTCAACCTGATGGCAGTGGTGCCCGACCGC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460680.6
CDS-3UTR CCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAGCGGGGACTTGTTGCTaGCTGACTTGGACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKAGTCC*LTWTPQ
Trigger: CTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGC...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACATTGTTGGGAGGGCTGTaGGATGGGGCTTGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTLLGGL*DGACAH
Trigger: ATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAA...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGATTGAGAGGTCCTTCTaGGACTCTTTGAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGIERSF*DSLSFS
Trigger: TGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAAT...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATCTCCACTGGGCTGCTaGACCCCTGGCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGSPLGC*TPGCLG
Trigger: TCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACATTGTGGGTCCTTCTCTaGTCATCAATCTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTLWVLL*SSILNF
Trigger: GAAGTTCAAGATTGATGACCAGAGAAGGACCCACAA...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAGGCCTCAGGGCACGATaGAAGGAATGTGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKGLRAR*KECGLV
Trigger: AACCAGGCCACATTCCTTCCATCGTGCCCTGAGGCC...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATAACATGGTGGCATGTTaGGTTGGAGCCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYNMVAC*VGAQKN
Trigger: ATTTTTCTGGGCTCCAACCCAACATGCCACCATGTT...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACCTAGGACCCTGTAGTTaGGACCGTGGCATGATACAA +
Preference number: 4 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHLGPCS*DRGMIQ
Trigger: TTGTATCATGCCACGGTCCCAACTACAGGGTCCTAG...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACCTAGAACCTTGCTATaGAGAGCAGTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGPRTLL*RAVLNS
Trigger: GCTGTTCAAGACTGCTCTCCATAGCAAGGTTCTAGG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACCAGGTCCACGCTGCTaGAGTTCAGGAGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGPGPRC*SSGARS
Trigger: TGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGACTCTTATCAGCTGCTaGAGAGCCTCTAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGTLISC*RASSTV
Trigger: GACAGTACTAGAGGCTCTGCAGCAGCTGATAAGAGT...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACATGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTCSTDS*PSAEPL
Trigger: GAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCA...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAATGTCTGTACTCTCATTaGTGGGGGTGGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKCLYSH*WGWVRA
Trigger: AGCCCTCACCCACCCCCAGCAATGAGAGTACAGACA...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACATGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATG +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTCPNSR*CLLSTM
Trigger: CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATTTGGGTATCAGCTGGTaGGCAAAGAACATGTTATTC +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYLGISW*AKNMLF
Trigger: GAATAACATGTTCTTTGCCCACCAGCTGATACCCAA...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGGCTATTATGGGCCTTaGCCAACTCCGGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKGYYGP*PTPGHC
Trigger: GCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAATGTTGCTGGCTGACTTaGACTCCTCAGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKCCWLT*TPQAAV
Trigger: CACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACA...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGCTTCTTCCTCCTGCATaGGGGACTTGGCATAATTGT +
Preference number: 4 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLLLPPA*GTWHNC
Trigger: ACAATTATGCCAAGTCCCCCATGCAGGAGGAAGAAG...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAACTGGCTGCCTTGGATTaGTCTGATGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKLAALD*SDGGRG
Trigger: TCCTCGCCCTCCATCAGACCAATCCAAGGCAGCCAG...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGTTGTGGGTCCTTCTCTaGTCATCAATCTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGLWVLL*SSILNF
Trigger: GAAGTTCAAGATTGATGACCAGAGAAGGACCCACAA...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGCCTGGACTCTCCAGCTaGGACTATTCAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGPGLSS*DYSVIL
Trigger: CAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAACATGATACAAGGACCTaGGCCCACCAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKHDTRT*AHQDSS
Trigger: GGAGCTGTCCTGGTGGGCCCAGGTCCTTGTATCATG...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAAACCCAGCCCAGTGCTaGGTCCCTGAGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKNPAQC*VPEFGT
Trigger: AGTGCCAAACTCAGGGACCCAGCACTGGGCTGGGTT...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACTCCAGAGGCACTGCTaGGCCCATTACCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLQRHC*AHYPLA
Trigger: TGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
3UTR CAA 72 bp CCCACTCAGTCACTATGTACAGATAAAGGGGCCTGCTaGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PTQSLCTDKGAC*DHLFQSHLAEA
Trigger: GGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTATCTGTACATAGTGACTGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKTLSKA*VAQELG
Trigger: ACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGATGGACAGAGGAATTaGGAGGTCCTTCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTDGQRN*EVLLGL
Trigger: GAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR TCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATGCCTTGGATTGGTCTaGTGGAGGGCGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGCLGLV*WRARNP
Trigger: AGGGTTCCTCGCCCTCCATCAGACCAATCCAAGGCA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR TCA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATTCTGGTCATCAATCTTaGACTTCTTCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYSGHQS*TSSSSL
Trigger: TAGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGA...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGCACTAAGGCCATTCTaGTTCTCAGGGAGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKALRPF*FSGRWR
Trigger: ACGCCACCTCCCTGAGAAGCAGAATGGCCTTAGTGC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGAGTTGGGTATCAGCTaGTGGGCAAAGAACATGTTA +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGELGIS*WAKNML
Trigger: TAACATGTTCTTTGCCCACCAGCTGATACCCAACTC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGGTCTGAATCAGCTCTaGCTGTGTTACTCTTATCAG +
Preference number: 4 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGGLNQL*LCYSYQ
Trigger: CTGATAAGAGTAACACAGCCAGAGCTGATTCAGACC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGGGTCTGAATCAGCTCTaGCTGTGTTACTCTTATCAG +
Preference number: 4 (lower is better)
Translates to: FRPIARATTLKAKSPRTLGLNQL*LCYSYQ
Trigger: CTGATAAGAGTAACACAGCCAGAGCTGATTCAGACC...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACTGGCTGCCTTGGATTaGTCTGATGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLAALD*SDGGRG
Trigger: TCCTCGCCCTCCATCAGACCAATCCAAGGCAGCCAG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGGAAGGAATGTGGCCTaGTTCCTCCCATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGGRNVA*FLPFPG
Trigger: CCCTGGGAATGGGAGGAACCAGGCCACATTCCTTCC...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGTAATACTGAGGGGCTaGACAGAGGCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTVILRG*TEALLS
Trigger: GCTCAGAAGAGCCTCTGTCCAGCCCCTCAGTATTAC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGCAGGAAGAGCTGAGTaGTGCCAGCTTCCTATAAGC +
Preference number: 4 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTAGRAE*CQLPIS
Trigger: GCTTATAGGAAGCTGGCACCACTCAGCTCTTCCTGC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATGGCATCAGGTCCTCTaGAACACAGGGGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGWHQVL*NTGAPT
Trigger: CGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGGGCCCATTACCCCTTaGCATCAGGTCCTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGGPITP*HQVLWN
Trigger: GTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCC...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR TCA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGATCTGGTCATCAATCTTaGACTTCTTCCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGSGHQS*TSSSSL
Trigger: TAGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGA...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATGTCTGTACTCTCATTaGTGGGGGTGGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGCLYSH*WGWVRA
Trigger: AGCCCTCACCCACCCCCAGCAATGAGAGTACAGACA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATGCCCCAACTCCAGATaGTGCCTCCTGAGCACTATG +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGCPNSR*CLLSTM
Trigger: CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAACGATGGAAGGAATGTaGCCTGGTTCCTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKTMEGM*PGSSHS
Trigger: GGAATGGGAGGAACCAGGCCACATTCCTTCCATCGT...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATTGATGGTGTTGGGCTaGAGCACTGACAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLMVLG*STDSCP
Trigger: TGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR GCA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGCACGCCTCATAGTTTaGAATCTCAGCCAAGACGTT +
Preference number: 4 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKARLIV*NLSQDV
Trigger: AACGTCTTGGCTGAGATTGCAAACTATGAGGCGTGC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469613.5
CDS-3UTR GCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAACTCTTATCAGCTGCTaGAGAGCCTCTAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGTLISC*RASSTV
Trigger: GACAGTACTAGAGGCTCTGCAGCAGCTGATAAGAGT...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CCA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACCTGGACTCTCCAGCTaGGACTATTCAGTAATACTG +
Preference number: 4 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGPGLSS*DYSVIL
Trigger: CAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGAGGGCCGCGTCGGGTaGGCTGAGCGGATAGGCGAG +
Preference number: 5 (lower is better)
Translates to: TLVRATRQEWAAESGPAVEGRVG*AERIGE
Trigger: CTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS CCA 90 bp CGGTCAGGCTTCCGCTGCTTGTGGAGCCGGCCGATGCTGACCCCTTaGCGCCGCCGCACGGAGATGTTCTGCTCCACTAGGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RSGFRCLWSRPMLTP*RRRTEMFCSTRLAS
Trigger: GCTGGCCAACCTAGTGGAGCAGAACATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS TCA 90 bp GTTTCCGCCGGTCAGGCTTCCGCTGCTTGTGGAGCCGGCCGATGCTaGCCCCTTGGCGCCGCCGCACGGAGATGTTCTGCTCCACTAGGT +
Preference number: 5 (lower is better)
Translates to: VSAGQASAACGAGRC*PLGAAARRCSAPLG
Trigger: ACCTAGTGGAGCAGAACATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCGGCGGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAGCCGATGCTGACCCCTaGGCGCCGCCGCACGGAGAT +
Preference number: 5 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGADADP*APPHGD
Trigger: ATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGC...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCTCAGGCTTCCGCTGCTaGTGGAGCCGGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: TLVRATRQEWAAESGPAVSGFRC*WSRPML
Trigger: CAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGA...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS TCA 90 bp GGAGATGTGGGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTTGGCTaGGCGGATAGGCGAGCGCAGTGGCGAGTTGAAAGCACTGCCGAT +
Preference number: 5 (lower is better)
Translates to: GDVGGDRAGGPRRVG*ADRRAQWRVESTAD
Trigger: ATCGGCAGTGCTTTCAACTCGCCACTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS GCA 90 bp CCCCACTCAAGGGCTCGCCAGGCCTCACCATCCCCGTCTTCTCTCTaGTGTCCGTGGCTTCCACGACCTCCTTCTCCACTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PHSRARQASPSPSSL*CPWLPRPPSPLGCW
Trigger: CCAGCAGCCCAGTGGAGAAGGAGGTCGTGGAAGCCACGGACAGCAGAGAGAAGACGGGGATGGTGAGGCCTGGCGAGCCCTTGAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS CCA 90 bp CAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGCGTTTCCGCCGGTCAGGCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: QEWAAESGPAVLTGA*PCRGESVSAGQASA
Trigger: AGCGGAAGCCTGACCGGCGGAAACGCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGACTGCTGGCCCTGACTCTGCAGCCCACTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACGAGGGCCGCGTCGGGTaGGCTGAGCGGATAGGCGAG +
Preference number: 5 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHEGRVG*AERIGE
Trigger: CTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTC...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCGGACCCCTGGCTGCCTaGGATTGGTCTGATGGAGGG +
Preference number: 5 (lower is better)
Translates to: TLVRATRQEWAAESGPAVGPLAA*DWSDGG
Trigger: CCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTCC...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGCCGATGCTGACCCCTaGGCGCCGCCGCACGGAGAT +
Preference number: 5 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRADADP*APPHGD
Trigger: ATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS GCA 90 bp CCCTCTGTCAGCGCCAGGGGACTCAGCACCCCATCCTCAGCCAGGTaGAGCAGGCCTGTGCTGATGACAGGACCCAGATCACGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PSVSARGLSTPSSAR*SRPVLMTGPRSRTA
Trigger: TGCTGTCCGTGATCTGGGTCCTGTCATCAGCACAGGCCTGCTGCACCTGGCTGAGGATGGGGTGCTGAGTCCCCTGGCGCTGACAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS-3UTR CAA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTCAGGCTTCCGCTGCTaGTGGAGCCGGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSGFRC*WSRPML
Trigger: CAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS CCA 90 bp ACACGCAGCAGGCTGTCATCCTCTCCAAAAAGCACCTTGGAGATGTaGGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTTGGCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: TRSRLSSSPKSTLEM*EVTGLEGRVGLAER
Trigger: CCGCTCAGCCAACCCGACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAGAGGATGACAGCCTGCTGCGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGATGACCCGCCGGGCCTaGTCTGTCCACTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQMTRRA*SVHSSS
Trigger: GGACGAGGAGTGGACAGACAAGGCCCGGCGGGTCAT...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTATGACCCGCCGGGCCTaGTCTGTCCACTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRMTRRA*SVHSSS
Trigger: GGACGAGGAGTGGACAGACAAGGCCCGGCGGGTCAT...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCGGACCCCTGGCTGCCTaGGATTGGTCTGATGGAGGG +
Preference number: 5 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPGPLAA*DWSDGG
Trigger: CCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTCC...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGCTTCCGCTGCTaGTGGAGCCGGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: QLQMLPPEHYGADLPCQASGFRC*WSRPML
Trigger: CAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGA...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGAGCCTGGCCTCATACTaGATCCTGCGGTCGGGCACC +
Preference number: 5 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSLASY*ILRSGT
Trigger: GGTGCCCGACCGCAGGATCAAGTATGAGGCCAGGCT...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460680.6
CDS CCA 90 bp CTGCCTGGAGGCTTCACCACTAGCTTGGGTTTGTTGGGAGGGCTGTaGGATGGGGCTTGTGCGCATGAACCAGCCGCCTCCTCTGCACCA +
Preference number: 5 (lower is better)
Translates to: LPGGFTTSLGLLGGL*DGACAHEPAASSAP
Trigger: TGGTGCAGAGGAGGCGGCTGGTTCATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCCTCCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CCA 90 bp CGTCTTCTCTCTGCTGTCCGTGGCTTCCACGACCTCCTTCTCCACTaGGCTGCTGGACCCCTGGCTGCCTTGGATTGGTCTGATGGAGGG +
Preference number: 5 (lower is better)
Translates to: RLLSAVRGFHDLLLH*AAGPLAALDWSDGG
Trigger: CCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGGAGGTCGTGGAAGCCACGGACAGCAGAGAGAAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS-3UTR CAA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCTCCACTTGCACCCCCTaGACACCGAAATCTTCCACG +
Preference number: 5 (lower is better)
Translates to: TLVRATRQEWAAESGPAVSTCTP*TPKSST
Trigger: CGTGGAAGATTTCGGTGTCAAGGGGGTGCAAGTGGA...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGAGCACCAGCGGGGACTaGTTGCTGGCTGACTTGGAC +
Preference number: 5 (lower is better)
Translates to: QMLPPEHYGADLPCQASGSTSGD*LLADLD
Trigger: GTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCT...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCACCATCTGTGTGGTaGCCCTCAGAGGCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQAPSVW*PSEAAG
Trigger: CCCTGCAGCCTCTGAGGGCAACCACACAGATGGTGC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp ACCCTGGTGAGGGCCACACGGCAAGAGTGGGCTGCAGAGTCAGGGCCAGCAGTCACCACTAGCTTGGGTTaGTTGGGAGGGCTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: TLVRATRQEWAAESGPAVTTSLG*LGGLWD
Trigger: ATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGT...GACTGCTGGCCCTGACTCTGCAGCCCACTCTTGCCGTGTGGCCCTCACCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTGCCGATGCTGACCCCTaGGCGCCGCCGCACGGAGAT +
Preference number: 5 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCADADP*APPHGD
Trigger: ATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGC...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTCCAACGGGTTGTCTaGATCCTGCTGTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLLQRVV*ILLSPT
Trigger: GGTGGGGGACAGCAGGATCAAGACAACCCGTTGGAG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp GGCGTGGCTCGGGCCTGGCATGGCTATTATGGGCCTTGGCCAACTCCGGGGCATCCAATCGCATATCCTTaGCTCTCAGGGCTGAAACCC +
Preference number: 5 (lower is better)
Translates to: GVARAWHGYYGPWPTPGHPIAYP*LSGLKP
Trigger: GGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGG...ATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAGGCCCGAGCCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAGCACCATCTGTGTGGTaGCCCTCAGAGGCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVAPSVW*PSEAAG
Trigger: CCCTGCAGCCTCTGAGGGCAACCACACAGATGGTGC...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGACCCCTGGCTGCCTaGGATTGGTCTGATGGAGGG +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGPLAA*DWSDGG
Trigger: CCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGGCCGATGCTGACCCCTaGGCGCCGCCGCACGGAGAT +
Preference number: 5 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGADADP*APPHGD
Trigger: ATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGC...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS GCA 90 bp AGGCTGCAGGGGCCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTTaGTGGCTGACTTGGACTCCTCAGGCAGCTGTGACTCTTGAGACT +
Preference number: 5 (lower is better)
Translates to: RLQGPCLLPAPAGTC*WLTWTPQAAVTLET
Trigger: AGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGGCCCCTGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS GCA 90 bp GCTAGAGGCAAGGATGAGCAGCGAGTCCATGCCTATCAAGGCCCCTaGCACCACCCAACCCAGAAAGTCTTCTGGCACATGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ARGKDEQRVHAYQGP*HHPTQKVFWHMAPA
Trigger: GGCTGGAGCCATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGGGGCCTTGATAGGCATGGACTCGCTGCTCATCCTTGCCTCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS-3UTR CAA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGTGGCTATTATGGGCCTaGGCCAACTCCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGWLLWA*ANSGAL
Trigger: CAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCA...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GGGCTGAAACCCTTGGTGAAGTCCTTCATGCGACTCAGGGTGGGTCCCAGGTCCTGGCTATTATGGGCCTaGGCCAACTCCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: GLKPLVKSFMRLRVGPRSWLLWA*ANSGAL
Trigger: CAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCA...GGACCTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGTTTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp CTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGAGCGCAGTGGCGAGTaGAAAGCACTGCCGATCTCA +
Preference number: 5 (lower is better)
Translates to: LCPNSRCCLLSTMGLICRERSGE*KALPIS
Trigger: TGAGATCGGCAGTGCTTTCAACTCGCCACTGCGCTC...ACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCACGATGGAGGCACGCCTCATAGTTaGCAATCTCAGCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PPEHYGADLPCQASGHDGGTPHS*QSQPPH
Trigger: GTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGCC...TCCATCGTGCCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGATCAGGCTTCCGCTGCTaGTGGAGCCGGCCGATGCTG +
Preference number: 5 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGSGFRC*WSRPML
Trigger: CAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGA...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS GCA 90 bp AGGTATAGGCCCCACCCCAACAGGCAGGCAGCGACTAGCCATACATaGCAGGCACCTGAGCTGGTACCTTCCAACAAGCTGTATGAGGGG +
Preference number: 5 (lower is better)
Translates to: RYRPHPNRQAATSHT*QAPELVPSNKLYEG
Trigger: CCCCTCATACAGCTTGTTGGAAGGTACCAGCTCAGGTGCCTGGCATGTATGGCTAGTCGCTGCCTGCCTGTTGGGGTGGGGCCTATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471532.5
CDS CCA 90 bp CTGCAGGGGCCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTTGCTaGCTGACTTGGACTCCTCAGGCAGCTGTGACTCTTGAGACTTGT +
Preference number: 5 (lower is better)
Translates to: LQGPCLLPAPAGTCC*LTWTPQAAVTLETC
Trigger: ACAAGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGGCCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTCAGGGCTGAAACCCTaGGTGAAGTCCTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSGLKP*VKSFMR
Trigger: TCGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTCAGGGCTGAAACCCTaGGTGAAGTCCTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: QMLPPEHYGADLPCQASGSGLKP*VKSFMR
Trigger: TCGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TTCATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGTCAGGGCTGAAACCCTaGGTGAAGTCCTTCATGCGA +
Preference number: 5 (lower is better)
Translates to: FMRLRVGPRSTLLQFRSTSGLKP*VKSFMR
Trigger: TCGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGA...CGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp TCCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATGAGTTGCGCCAACTCCGGGGCATaGCCAATCGCATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: SQVHAAAVQEHAQQGMSCANSGA*PIAYPL
Trigger: CAAAGGATATGCGATTGGCAATGCCCCGGAGTTGGC...GCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp TCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACATGGCTATTATGGGCCTaGGCCAACTCCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: SRGTAGPITPWHQVLWNTWLLWA*ANSGAL
Trigger: CAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCA...TGTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAGCCTGGCCTCATACTaGATCCCTGCAGTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: PPIPRAWTLQLGLFSNTGSLASY*IPAVAR
Trigger: CCTCGCCACTGCAGGGATCAAGTATGAGGCCAGGCT...CCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296288.9
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCTTCACCACTAGCTaGGGTTTGTTGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGFTTS*GLLGGL
Trigger: CAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGTACCTAAGGGCAGAGTaGGTGTTCTGCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: QMLPPEHYGADLPCQASGYLRAE*VFCTSS
Trigger: GGATGACGTGCAGAACACCAACTCTGCCCTTAGGTA...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAAAGACGTTGATGGTGTaGGGCTGCAGCACTGACAGT +
Preference number: 5 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGKTLMV*GCSTDS
Trigger: ACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTT...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGAAGACGTTGATGGTGTaGGGCTGCAGCACTGACAGT +
Preference number: 5 (lower is better)
Translates to: QMLPPEHYGADLPCQASGKTLMV*GCSTDS
Trigger: ACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTT...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGTTCTCAGCCAAGACGTaGATGGTGTTGGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGFSAKT*MVLGCS
Trigger: GCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAA...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTCCTTCTGGGACTCTTaGAGCTTCTCAGCCAAGACG +
Preference number: 5 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSFWDS*SFSAKT
Trigger: CGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGTGTCTGTACTCTCATaGCTGGGGGTGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYVSVLS*LGVGEG
Trigger: GCCCTCACCCACCCCCAGCAATGAGAGTACAGACAC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGGCACGCCTCATAGTTaGCAATCTCAGCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQGTPHS*QSQPPH
Trigger: GTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGCC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCATCTCAGCCAAGACGTaGATGGTGTTGGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QLQMLPPEHYGADLPCQAISAKT*MVLGCS
Trigger: GCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAT...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469613.5
CDS GCA 90 bp TTCTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTCAATGCCCCTGGCTTCCCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FSAKTLMVLGCSTDS*PSAEPLNAPGFPVP
Trigger: GGGAACAGGGAAGCCAGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS GCA 90 bp ATCTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTCAATGCCCCTGGCTTCCCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: ISAKTLMVLGCSTDS*PSAEPLNAPGFPVP
Trigger: GGGAACAGGGAAGCCAGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469613.5
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGTAGATCTCCTCCACTaGCACCCCCTTGACACCGAA +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMVDLLH*HPLDTE
Trigger: TTCGGTGTCAAGGGGGTGCAAGTGGAGGAGATCTAC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGCCCCGCTGCTAGTCTaGATGGACAGAGGAATTGAG +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMAPLLV*MDRGIE
Trigger: CTCAATTCCTCTGTCCATCAAGACTAGCAGCGGGGC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp ATTACCCCTTGGCATCAGGTCCTCTGGAACACAGGGGCTCCAACGGGTTGTCTTGTGTCTGTACTCTCATaGCTGGGGGTGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: ITPWHQVLWNTGAPTGCLVSVLS*LGVGEG
Trigger: GCCCTCACCCACCCCCAGCAATGAGAGTACAGACAC...AAGACAACCCGTTGGAGCCCCTGTGTTCCAGAGGACCTGATGCCAAGGGGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCCGGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGTCTCCAAAAAGCACCTaGGAGATGTGGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SRLWRKLQYLAVPQLQMLSPKST*EMWEVT
Trigger: TGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAGA...CAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCACGCCTCATAGTTaGCAATCTCAGCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMGTPHS*QSQPPH
Trigger: GTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGCC...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCTCAGGGCTATGGAGAGCAGTCTaGAACAGCCTGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: QMLPPEHYGADLPCQASGLWRAV*NSLART
Trigger: TGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAG...CCCTGAGGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp GGCTGTGGAGGAAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTATGGAGAGCAGTCTaGAACAGCCTGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: GCGGSCSTSLCPNSRCCLLWRAV*NSLART
Trigger: TGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAG...GAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTTCCTCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp TGGGCTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAAAGAGCCCTAGAACCTaGCTATGGAGAGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: WAPEALLGPLPLGIRSSGKSPRT*LWRAVL
Trigger: CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTT...TCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp CCCCAGCTAGGACCCTGTAGTTGGGACCGTGGCATGATACAAGGACCTGGGCCCAAGAGCCCTAGAACCTaGCTATGGAGAGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: PQLGPCSWDRGMIQGPGPKSPRT*LWRAVL
Trigger: CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTT...GGGCCCAGGTCCTTGTATCATGCCACGGTCCCAACTACAGGGTCCTAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGGCACGCCTCATAGTTaGCAATCTCAGCCAAGACGT +
Preference number: 5 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQGTPHS*QSQPRR
Trigger: ACGTCTTGGCTGAGATTGCAAACTATGAGGCGTGCC...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469613.5
CDS TCA 90 bp CCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGTATCAGCTGGTGGGCAAAGAACATG +
Preference number: 5 (lower is better)
Translates to: PRSTLLQFRSTLSKA*VAQELGISWWAKNM
Trigger: CATGTTCTTTGCCCACCAGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000470173.1
ENST00000483984.5
CDS TCA 90 bp TTTGAGCTTCTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGAACCGCTCAATGCCCCTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FELLSQDVDGVGLQH*QLPISRTAQCPWLP
Trigger: GGGAAGCCAGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS TCA 90 bp GTTTGCAATCTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGAACCGCTCAATGCCCCTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VCNLSQDVDGVGLQH*QLPISRTAQCPWLP
Trigger: GGGAAGCCAGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGATTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469613.5
CDS CCA 90 bp CCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTTGCTGGCTGACTTaGACTCCTCAGGCAGCTGTGACTCTTGAGACTTGTGGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PCLLPAPAGTCCWLT*TPQAAVTLETCGSE
Trigger: TTCAGACCCACAAGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS CCA 90 bp GGCCCTGTGAACCAGCACTTCCCAGAGAAGAACAGCCCAGCCAGCTaGTGCAATGGGAGTCAGCAAGCTCTAAGTCATGATCCCGCAATG +
Preference number: 5 (lower is better)
Translates to: GPVNQHFPEKNSPAS*CNGSQQALSHDPAM
Trigger: CATTGCGGGATCATGACTTAGAGCTTGCTGACTCCCATTGCACCAGCTGGCTGGGCTGTTCTTCTCTGGGAAGTGCTGGTTCACAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490804.1
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGCCAATCGCATATCCTTaGCTCTCAGGGCTGAAACCC +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMPIAYP*LSGLKP
Trigger: GGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGG...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGAGGGCCGCGTCGGGTaGGCTGAGCGGATAGGCGAG +
Preference number: 5 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKEGRVG*AERIGE
Trigger: CTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS-3UTR CAA 90 bp CCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGCAACATGGTGGCATGTaGGGTTGGAGCCCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PQLQMLPPEHYGADLPCQQHGGM*GWSPEK
Trigger: TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTG...CTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp CTCCAGAGGCACTGCTGGGCCCATTACCCCTTGGCATCAGGTCCTCTGGAACACCAACATGGTGGCATGTaGGGTTGGAGCCCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LQRHCWAHYPLASGPLEHQHGGM*GWSPEK
Trigger: TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTG...GTGTTCCAGAGGACCTGATGCCAAGGGGTAATGGGCCCAGCAGTGCCTCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp CTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGGGCAACATGGTGGCATGTaGGGTTGGAGCCCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LQYLAVPQLQMLPPEHYGQHGGM*GWSPEK
Trigger: TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTG...CCCATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACCTCCAACGGGTTGTCTaGATCCTGCTGTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHLQRVV*ILLSPT
Trigger: GGTGGGGGACAGCAGGATCAAGACAACCCGTTGGAG...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS TCA 90 bp AGCCGGACTCCCAGCCCCGCTGCTAGTCTTGATGGACAGAGGAATTaGGAGGTCCTTCTGGGACTCTTTGAGCTTCTCAGCCAAGACGTT +
Preference number: 5 (lower is better)
Translates to: SRTPSPAASLDGQRN*EVLLGLFELLSQDV
Trigger: AACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAGCAGCGGGGCTGGGAGTCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS TCA 90 bp CCCAGGTCCACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGTATCAGCCCTGACATTTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PRSTLLQFRSTLSKA*VAQELGISPDICSE
Trigger: TTCAGAGCAAATGTCAGGGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS GCA 90 bp TGGGACTCTTTGAGCTTCTCAGCCAAGACGTTGATGGTGTTGGGCTaGAGCACTGACAGTTGCCCATCAGCAGAACCGCTCAATGCCCCT +
Preference number: 5 (lower is better)
Translates to: WDSLSFSAKTLMVLG*STDSCPSAEPLNAP
Trigger: AGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAGAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CCA 90 bp CCAACAGGCAGGCAGCGACTAGCCATACATGCCAGGCACCTGAGCTaGTACCTTCCAACAAGCTGTATGAGGGGCCTATCTGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: PTGRQRLAIHARHLS*YLPTSCMRGLSGSE
Trigger: TTCACTTCCAGATAGGCCCCTCATACAGCTTGTTGGAAGGTACCAGCTCAGGTGCCTGGCATGTATGGCTAGTCGCTGCCTGCCTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471532.5
CDS-3UTR CAA 90 bp ACCCTTGGTGAAGTCCTTCATGCGACTCAGGGTGGGTCCCAGGTCCACGCTGCTTCAGCAAGGCATGAGTaGCACAAGAGTTGGGTATCA +
Preference number: 5 (lower is better)
Translates to: TLGEVLHATQGGSQVHAASARHE*HKSWVS
Trigger: TGATACCCAACTCTTGTGCAACTCATGCCTTGCTGA...AGCAGCGTGGACCTGGGACCCACCCTGAGTCGCATGAAGGACTTCACCAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATTACCTAAGGGCAGAGTaGGTGTTCTGCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYYLRAE*VFCTSS
Trigger: GGATGACGTGCAGAACACCAACTCTGCCCTTAGGTA...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATAAGACGTTGATGGTGTaGGGCTGCAGCACTGACAGT +
Preference number: 5 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYKTLMV*GCSTDS
Trigger: ACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTT...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS CCA 90 bp GCCCCGCTGCTAGTCTTGATGGACAGAGGAATTGAGAGGTCCTTCTaGGACTCTTTGAGCTTCTCAGCCAAGACGTTGATGGTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: APLLVLMDRGIERSF*DSLSFSAKTLMVLG
Trigger: GCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAGCAGCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CCA 90 bp CATGCCTATCAAGGCCCCTGCCACCACCCAACCCAGAAAGTCTTCTaGCACATGGCTCCAGCCACCAATCTTCACACCAAAGTTCCAATC +
Preference number: 5 (lower is better)
Translates to: HAYQGPCHHPTQKVF*HMAPATNLHTKVPI
Trigger: GATTGGAACTTTGGTGTGAAGATTGGTGGCTGGAGCCATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGGGGCCTTGATAGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS-3UTR CAA 90 bp CCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGAAGTGGGGTCCACTTGCACCCCCTaGACACCGAAATCTTCCACG +
Preference number: 5 (lower is better)
Translates to: PGLSSWDYSVILGKGEVGSTCTP*TPKSST
Trigger: CGTGGAAGATTTCGGTGTCAAGGGGGTGCAAGTGGA...CCCCACTTCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGGTAGATCTCCTCCACTaGCACCCCCTTGACACCGAA +
Preference number: 5 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLVDLLH*HPLDTE
Trigger: TTCGGTGTCAAGGGGGTGCAAGTGGAGGAGATCTAC...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGTCAGCAAGGCATGAGTaGCACAAGAGTTGGGTATCA +
Preference number: 5 (lower is better)
Translates to: SCSTSLCPNSRCCLLSTMSARHE*HKSWVS
Trigger: TGATACCCAACTCTTGTGCAACTCATGCCTTGCTGA...CATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGGCCAACTCCGGGGCATaGCCAATCGCATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: FRPIARATTLKAKSPRTLANSGA*PIAYPL
Trigger: CAAAGGATATGCGATTGGCAATGCCCCGGAGTTGGC...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGTTGTTGCTGGCTGACTaGGACTCCTCAGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLLLLAD*DSSGSC
Trigger: ACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAA...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTTGACCACTAGCTTGGGTTaGTTGGGAGGGCTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: ATTLKAKSPRTLLWRAVLTTSLG*LGGLWD
Trigger: ATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGT...CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTTCCTTCTGGGACTCTTaGAGCTTCTCAGCCAAGACG +
Preference number: 5 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCSFWDS*SFSAKT
Trigger: CGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGA...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGCCCCGCTGCTAGTCTaGATGGACAGAGGAATTGAG +
Preference number: 5 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHAPLLV*MDRGIE
Trigger: CTCAATTCCTCTGTCCATCAAGACTAGCAGCGGGGC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACGAGCAATAGGCAGCTaGGGTGAGTATTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGRAIGS*GEYFSP
Trigger: TGGGGAGAAATACTCACCCAAGCTGCCTATTGCTCG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478368.1
CDS-3UTR CAA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCCAATCGCATATCCTTaGCTCTCAGGGCTGAAACCC +
Preference number: 5 (lower is better)
Translates to: FRPIARATTLKAKSPRTLPIAYP*LSGLKP
Trigger: GGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAAGCACCAGCGGGGACTaGTTGCTGGCTGACTTGGAC +
Preference number: 5 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTSTSGD*LLADLD
Trigger: GTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCT...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CAACTCCAGATGCTGCCTCCTGAGCACTATGGGGCTGATCTGCCGTGTCAGGCCCTCTGGTCATCAATCTaGAACTTCTTCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QLQMLPPEHYGADLPCQALWSSI*NFFLFS
Trigger: AGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAG...GGCCTGACACGGCAGATCAGCCCCATAGTGCTCAGGAGGCAGCATCTGGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGACAACATGGTGGCATGTaGGGTTGGAGCCCAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGQHGGM*GWSPEK
Trigger: TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTG...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp GCCTGCTTGGATCACCTTTTTCAAAGCCATCTGGCAGAGGCCATGGGGCTGTGTAAGAGCCCTAGAACCTaGCTATGGAGAGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: ACLDHLFQSHLAEAMGLCKSPRT*LWRAVL
Trigger: CAAGACTGCTCTCCATAGCAAGGTTCTAGGGCTCTT...ACACAGCCCCATGGCCTCTGCCAGATGGCTTTGAAAAAGGTGATCCAAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp AAGCTGCAGTACCTCGCTGTGCCCCAACTCCAGATGCTGCCTCCTGAGCACTATGATAAAGGGGCCTGCTaGGATCACCTTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: KLQYLAVPQLQMLPPEHYDKGAC*DHLFQS
Trigger: GCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTATC...ATAGTGCTCAGGAGGCAGCATCTGGAGTTGGGGCACAGCGAGGTACTGCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS GCA 90 bp GTCCACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATGAGTTaGACAAGAGTTGGGTATCAGCTGGTGGGCAAAGAACATGTTATT +
Preference number: 5 (lower is better)
Translates to: VHAAAVQEHAQQGMS*TRVGYQLVGKEHVI
Trigger: AATAACATGTTCTTTGCCCACCAGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000470173.1
ENST00000483984.5
CDS CCA 90 bp ATCAAGGCCCCTGCCACCACCCAACCCAGAAAGTCTTCTGGCACATaGCTCCAGCCACCAATCTTCACACCAAAGTTCCAATCAAGAACT +
Preference number: 5 (lower is better)
Translates to: IKAPATTQPRKSSGT*LQPPIFTPKFQSRT
Trigger: AGTTCTTGATTGGAACTTTGGTGTGAAGATTGGTGGCTGGAGCCATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGGGGCCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS-3UTR CAA 90 bp AATCGCATATCCTTTGCTCTCAGGGCTGAAACCCTTGGTGAAGTCCTTCATGCGTCCACTTGCACCCCCTaGACACCGAAATCTTCCACG +
Preference number: 5 (lower is better)
Translates to: NRISFALRAETLGEVLHASTCTP*TPKSST
Trigger: CGTGGAAGATTTCGGTGTCAAGGGGGTGCAAGTGGA...CGCATGAAGGACTTCACCAAGGGTTTCAGCCCTGAGAGCAAAGGATATGCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS-3UTR CAA 90 bp GCCTGGTTCCTCCCATTCCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTACGCTCTTCGATCCATTaGAACAGGAAGATAAATCCA +
Preference number: 5 (lower is better)
Translates to: AWFLPFPGPGLSSWDYSVRSSIH*NRKINP
Trigger: TGGATTTATCTTCCTGTTCAAATGGATCGAAGAGCG...TACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGGAATGGGAGGAACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp CCCAGGGCCTGGACTCTCCAGCTGGGACTATTCAGTAATACTGGGAAAAGGGGATCAGCAAGGCATGAGTaGCACAAGAGTTGGGTATCA +
Preference number: 5 (lower is better)
Translates to: PRAWTLQLGLFSNTGKRGSARHE*HKSWVS
Trigger: TGATACCCAACTCTTGTGCAACTCATGCCTTGCTGA...TCCCCTTTTCCCAGTATTACTGAATAGTCCCAGCTGGAGAGTCCAGGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGAGCGCAGTGGCGAGTaGAAAGCACTGCCGATCTCA +
Preference number: 5 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTERSGE*KALPIS
Trigger: TGAGATCGGCAGTGCTTTCAACTCGCCACTGCGCTC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTATGGAGAGCAGTCTaGAACAGCCTGGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: FRPIARATTLKAKSPRTLLWRAV*NSLART
Trigger: TGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACAGCCAACTCCGGGGCATaGCCAATCGCATATCCTTTG +
Preference number: 5 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTANSGA*PIAYPL
Trigger: CAAAGGATATGCGATTGGCAATGCCCCGGAGTTGGC...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAAGGCTTCACCACTAGCTaGGGTTTGTTGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKGFTTS*GLLGGL
Trigger: CAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCC...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAGTGCCAGCAGCTCCTaGGGTGAGTATTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SQVGTYVNMVACWVGAQKSASSS*GEYFSP
Trigger: TGGGGAGAAATACTCACCCAAGGAGCTGCTGGCACT...TTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACTCCAACGGGTTGTCTaGATCCTGCTGTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLQRVV*ILLSPT
Trigger: GGTGGGGGACAGCAGGATCAAGACAACCCGTTGGAG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp GGTAAAATATATATTCTGCTGCCCAGGCAGAAGGGCCAGGTCCTGCTGCTCCACGATAAAGGGGCCTGCTaGGATCACCTTTTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: GKIYILLPRQKGQVLLLHDKGAC*DHLFQS
Trigger: GCTTTGAAAAAGGTGATCCAAGCAGGCCCCTTTATC...GTGGAGCAGCAGGACCTGGCCCTTCTGCCTGGGCAGCAGAATATATATTTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATTGTTGCTGGCTGACTaGGACTCCTCAGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLLLAD*DSSGSC
Trigger: ACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGATTCTCAGCCAAGACGTaGATGGTGTTGGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGFSAKT*MVLGCS
Trigger: GCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAA...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAACCTTGCTATGGAGAGCAGTCTTGAACAGCCTGGCTAGAACAAGGAAGACATCTCCAAAAAGCACCTaGGAGATGTGGGAGGTGACA +
Preference number: 5 (lower is better)
Translates to: RTLLWRAVLNSLARTRKTSPKST*EMWEVT
Trigger: TGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAGA...TGTCTTCCTTGTTCTAGCCAGGCTGTTCAAGACTGCTCTCCATAGCAAGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAAGTGCCAGCAGCTCCTaGGGTGAGTATTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGSASSS*GEYFSP
Trigger: TGGGGAGAAATACTCACCCAAGGAGCTGCTGGCACT...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS-3UTR CAA 90 bp TTTAGGCCCATAGCTAGGGCCACAACACTGAAGGCGAAGAGCCCTAGAACCTTGCTCTGGTCATCAATCTaGAACTTCTTCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FRPIARATTLKAKSPRTLLWSSI*NFFLFS
Trigger: AGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAG...CAAGGTTCTAGGGCTCTTCGCCTTCAGTGTTGTGGCCCTAGCTATGGGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
CDS-3UTR CAA 90 bp TCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGAGCCCAGAAAAACTCTGGTCATCAATCTaGAACTTCTTCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SGRNLCQHGGMLGWSPEKLWSSI*NFFLFS
Trigger: AGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAG...TTTTTCTGGGCTCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS-3UTR CAA 90 bp AGAAAGCATAGTCAGGTAGGAACTTATGTCAACATGGTGGCATGTTGGGTTGGACTCTGGTCATCAATCTaGAACTTCTTCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RKHSQVGTYVNMVACWVGLWSSI*NFFLFS
Trigger: AGAGAAGAGGAAGAAGTTCAAGATTGATGACCAGAG...TCCAACCCAACATGCCACCATGTTGACATAAGTTCCTACCTGACTATGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000478368.1
CDS CCA 72 bp CGAGAGCGTTTCCGCCGGTCAGGCTTCCGCTGCTTGTaGAGCCGGCCGATGCTGACCCCTTGGCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RERFRRSGFRCL*SRPMLTPWRRR
Trigger: GCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCGGCGGAAACGCTCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS CAA 72 bp GGGCGAGAGCGTTTCCGCCGGTCAGGCTTCCGCTGCTaGTGGAGCCGGCCGATGCTGACCCCTTGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRERFRRSGFRC*WSRPMLTPWRR
Trigger: GCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACCGGCGGAAACGCTCTCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS TCA 72 bp GGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTTGGCTaGGCGGATAGGCGAGCGCAGTGGCGAGTTGAAAGC +
Preference number: 6 (lower is better)
Translates to: GGDRAGGPRRVG*ADRRAQWRVES
Trigger: GCTTTCAACTCGCCACTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTCCAGCCCTGTCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS TCA 72 bp GGTCAGGCTTCCGCTGCTTGTGGAGCCGGCCGATGCTaGCCCCTTGGCGCCGCCGCACGGAGATGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GQASAACGAGRC*PLGAAARRCSA
Trigger: AGCAGAACATCTCCGTGCGGCGGCGCCAAGGGGTCAGCATCGGCCGGCTCCACAAGCAGCGGAAGCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS CAA 72 bp ATGTGGGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTaGGCTGAGCGGATAGGCGAGCGCAGTGGCGAGTTG +
Preference number: 6 (lower is better)
Translates to: MWEVTGLEGRVG*AERIGERSGEL
Trigger: CAACTCGCCACTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTCCAGCCCTGTCACCTCCCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS GCA 72 bp CTGAGTACTGCTGGGGTGGGCGGACTGGAACTCGGCTaGGGCCCACACCTGCCGCCAGGTCTTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LSTAGVGGLELG*GPHLPPGLLPP
Trigger: AGGAGGAAGAAGACCTGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CCA 72 bp GCTGCAGAGTCAGGGCCAGCAGTCCTCACTGGCGCTTaGCCTTGTAGGGGCGAGAGCGTTTCCGCCGGTCAG +
Preference number: 6 (lower is better)
Translates to: AAESGPAVLTGA*PCRGESVSAGQ
Trigger: CTGACCGGCGGAAACGCTCTCGCCCCTACAAGGCCAAGCGCCAGTGAGGACTGCTGGCCCTGACTCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000469613.5
ENST00000478368.1
CDS CAA 90 bp ACCTTGGAGATGTGGGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTaGGCTGAGCGGATAGGCGAGCGCAGTGGCGAGTTGAAAGCACTG +
Preference number: 6 (lower is better)
Translates to: TLEMWEVTGLEGRVG*AERIGERSGELKAL
Trigger: CAGTGCTTTCAACTCGCCACTGCGCTCGCCTATCCGCTCAGCCAACCCGACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCCAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS GCA 72 bp AGCGCCAGGGGACTCAGCACCCCATCCTCAGCCAGGTaGAGCAGGCCTGTGCTGATGACAGGACCCAGATCA +
Preference number: 6 (lower is better)
Translates to: SARGLSTPSSAR*SRPVLMTGPRS
Trigger: TGATCTGGGTCCTGTCATCAGCACAGGCCTGCTGCACCTGGCTGAGGATGGGGTGCTGAGTCCCCTGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS CCA 72 bp GGCTTCACCACTAGCTTGGGTTTGTTGGGAGGGCTGTaGGATGGGGCTTGTGCGCATGAACCAGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: GFTTSLGLLGGL*DGACAHEPAAS
Trigger: GGAGGCGGCTGGTTCATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CAA 72 bp GGGGCCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTaGCTGGCTGACTTGGACTCCTCAGGCAGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: GALFASSTSGDL*LADLDSSGSCD
Trigger: GTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS CAA 90 bp CTGCACCATCTGTGTGGTTGCCCTCAGAGGCTGCAGGGGCCCTGTTaGCTTCCAGCACCAGCGGGGACTTGTTGCTGGCTGACTTGGACT +
Preference number: 6 (lower is better)
Translates to: LHHLCGCPQRLQGPC*LPAPAGTCCWLTWT
Trigger: AGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGGCCCCTGCAGCCTCTGAGGGCAACCACACAGATGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS CAA 90 bp ACCCCATTGAGGCTGCTGCCTGGAGGCTTCACCACTAGCTTGGGTTaGTTGGGAGGGCTGTGGGATGGGGCTTGTGCGCATGAACCAGCC +
Preference number: 6 (lower is better)
Translates to: TPLRLLPGGFTTSLG*LGGLWDGACAHEPA
Trigger: GGCTGGTTCATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCCTCCAGGCAGCAGCCTCAATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS GCA 72 bp GGGCCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTTaGTGGCTGACTTGGACTCCTCAGGCAGCTGTGACT +
Preference number: 6 (lower is better)
Translates to: GPCLLPAPAGTC*WLTWTPQAAVT
Trigger: AGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS GCA 72 bp CCCCACCCCAACAGGCAGGCAGCGACTAGCCATACATaGCAGGCACCTGAGCTGGTACCTTCCAACAAGCTG +
Preference number: 6 (lower is better)
Translates to: PHPNRQAATSHT*QAPELVPSNKL
Trigger: CAGCTTGTTGGAAGGTACCAGCTCAGGTGCCTGGCATGTATGGCTAGTCGCTGCCTGCCTGTTGGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471532.5
CDS CCA 72 bp AGGCTGTCATCCTCTCCAAAAAGCACCTTGGAGATGTaGGAGGTGACAGGGCTGGAGGGCCGCGTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: RLSSSPKSTLEM*EVTGLEGRVGL
Trigger: CAACCCGACGCGGCCCTCCAGCCCTGTCACCTCCCACATCTCCAAGGTGCTTTTTGGAGAGGATGACAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000478368.1
CDS CAA 72 bp AGGCTGCTGCCTGGAGGCTTCACCACTAGCTTGGGTTaGTTGGGAGGGCTGTGGGATGGGGCTTGTGCGCAT +
Preference number: 6 (lower is better)
Translates to: RLLPGGFTTSLG*LGGLWDGACAH
Trigger: ATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCCTCCAGGCAGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CAA 72 bp GGGTTGGCTGAGCGGATAGGCGAGCGCAGTGGCGAGTaGAAAGCACTGCCGATCTCAGAGGCCGTGTCTGTA +
Preference number: 6 (lower is better)
Translates to: GLAERIGERSGE*KALPISEAVSV
Trigger: TACAGACACGGCCTCTGAGATCGGCAGTGCTTTCAACTCGCCACTGCGCTCGCCTATCCGCTCAGCCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS CAA 90 bp GAGTTGAAAGCACTGCCGATCTCAGAGGCCGTGTCTGTACTCTCATaGCTGGGGGTGGGTGAGGGCTGCGAGTGTGTGGGCACTGCCACA +
Preference number: 6 (lower is better)
Translates to: ELKALPISEAVSVLS*LGVGEGCECVGTAT
Trigger: TGTGGCAGTGCCCACACACTCGCAGCCCTCACCCACCCCCAGCAATGAGAGTACAGACACGGCCTCTGAGATCGGCAGTGCTTTCAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS TCA 72 bp TTTGTTGGGAGGGCTGTGGGATGGGGCTTGTGCGCATaGACCAGCCGCCTCCTCTGCACCATCTGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: FVGRAVGWGLCA*TSRLLCTICVV
Trigger: AACCACACAGATGGTGCAGAGGAGGCGGCTGGTTCATGCGCACAAGCCCCATCCCACAGCCCTCCCAACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS GCA 72 bp GCCCAGGGGCCTGTGGTAACAGCGGCCCTTTACAGGTaGCTTTCTTTAGGGAAGGACTGCTCTCCCTCTACC +
Preference number: 6 (lower is better)
Translates to: AQGPVVTAALYR*LSLGKDCSPST
Trigger: GGTAGAGGGAGAGCAGTCCTTCCCTAAAGAAAGGCACCTGTAAAGGGCCGCTGTTACCACAGGCCCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490804.1
CDS CAA 72 bp CCATTGAGGCTGCTGCCTGGAGGCTTCACCACTAGCTaGGGTTTGTTGGGAGGGCTGTGGGATGGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PLRLLPGGFTTS*GLLGGLWDGAC
Trigger: ACAAGCCCCATCCCACAGCCCTCCCAACAAACCCAAGCTAGTGGTGAAGCCTCCAGGCAGCAGCCTCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CAA 90 bp TGTGTGGGCACTGCCACAGCCGGACTCCCAGCCCCGCTGCTAGTCTaGATGGACAGAGGAATTGAGAGGTCCTTCTGGGACTCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: CVGTATAGLPAPLLV*MDRGIERSFWDSLS
Trigger: GCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAGCAGCGGGGCTGGGAGTCCGGCTGTGGCAGTGCCCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CAA 90 bp AGGGCCCTGGCATGGCTATTATGGGCCTTGGCCAACTCCGGGGCATaGCCAATCGCATATCCTTTGCTCTCAGGGCTGAAACCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RALAWLLWALANSGA*PIAYPLLSGLKPLV
Trigger: CACCAAGGGTTTCAGCCCTGAGAGCAAAGGATATGCGATTGGCAATGCCCCGGAGTTGGCCAAGGCCCATAATAGCCATGCCAGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483984.5
CDS TCA 72 bp CTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACTaGCAGTTGCCCATCAGCAGAACCGCTCAATGCCCC +
Preference number: 6 (lower is better)
Translates to: LSQDVDGVGLQH*QLPISRTAQCP
Trigger: GGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000490804.1
CDS CCA 72 bp CCCTGTTTGCTTCCAGCACCAGCGGGGACTTGTTGCTaGCTGACTTGGACTCCTCAGGCAGCTGTGACTCTT +
Preference number: 6 (lower is better)
Translates to: PCLLPAPAGTCC*LTWTPQAAVTL
Trigger: AAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAGCAAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS TCA 72 bp ACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGTATCAGCTGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: TLLQFRSTLSKA*VAQELGISWWA
Trigger: TGCCCACCAGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000470173.1
ENST00000483984.5
CDS GCA 72 bp AAGACGTTGATGGTGTTGGGCTGCAGCACTGACAGTTaGCCATCAGCAGAACCGCTCAATGCCCCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: KTLMVLGCSTDS*PSAEPLNAPGF
Trigger: GAAGCCAGGGGCATTGAGCGGTTCTGCTGATGGGCAACTGTCAGTGCTGCAGCCCAACACCATCAACGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000469613.5
ENST00000490804.1
CDS GCA 72 bp CAGGACCCAGATCACGGACAGCACGGTTGTAGCGTATaGAGTCAACACGCAGCAGGCTGTCATCCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: QDPDHGQHGCSV*SQHAAGCHPLQ
Trigger: TTGGAGAGGATGACAGCCTGCTGCGTGTTGACTGCATACGCTACAACCGTGCTGTCCGTGATCTGGGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS GCA 72 bp AAGGATGAGCAGCGAGTCCATGCCTATCAAGGCCCCTaGCACCACCCAACCCAGAAAGTCTTCTGGCACATG +
Preference number: 6 (lower is better)
Translates to: KDEQRVHAYQGP*HHPTQKVFWHM
Trigger: CATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGGGGCCTTGATAGGCATGGACTCGCTGCTCATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS CCA 72 bp CTTCCAGCACCAGCGGGGACTTGTTGCTGGCTGACTTaGACTCCTCAGGCAGCTGTGACTCTTGAGACTTGT +
Preference number: 6 (lower is better)
Translates to: LPAPAGTCCWLT*TPQAAVTLETC
Trigger: ACAAGTCTCAAGAGTCACAGCTGCCTGAGGAGTCCAAGTCAGCCAGCAACAAGTCCCCGCTGGTGCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296288.9
ENST00000460680.6
CDS CCA 72 bp CAAGGCCCCTGCCACCACCCAACCCAGAAAGTCTTCTaGCACATGGCTCCAGCCACCAATCTTCACACCAAA +
Preference number: 6 (lower is better)
Translates to: QGPCHHPTQKVF*HMAPATNLHTK
Trigger: TTTGGTGTGAAGATTGGTGGCTGGAGCCATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS CAA 90 bp ATGGCTCCAGCCACCAATCTTCACACCAAAGTTCCAATCAAGAACTaGGCACCTGGGCAGGAGGAGCTCAGGCCTTACCCTCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: MAPATNLHTKVPIKN*APGQEELRPYPLPG
Trigger: TCCTGGCAGAGGGTAAGGCCTGAGCTCCTCCTGCCCAGGTGCCAAGTTCTTGATTGGAACTTTGGTGTGAAGATTGGTGGCTGGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS CCA 72 bp AGGCAGCGACTAGCCATACATGCCAGGCACCTGAGCTaGTACCTTCCAACAAGCTGTATGAGGGGCCTATCT +
Preference number: 6 (lower is better)
Translates to: RQRLAIHARHLS*YLPTSCMRGLS
Trigger: AGATAGGCCCCTCATACAGCTTGTTGGAAGGTACCAGCTCAGGTGCCTGGCATGTATGGCTAGTCGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471532.5
CDS TCA 72 bp ACGCTGCTGCAGTTCAGGAGCACGCTCAGCAAGGCATaGGTTGCACAAGAGTTGGGTATCAGCCCTGACATT +
Preference number: 6 (lower is better)
Translates to: TLLQFRSTLSKA*VAQELGISPDI
Trigger: AATGTCAGGGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490917.1
CDS GCA 72 bp GCTGCAGTTCAGGAGCACGCTCAGCAAGGCATGAGTTaGACAAGAGTTGGGTATCAGCTGGTGGGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: AAVQEHAQQGMS*TRVGYQLVGKE
Trigger: TTCTTTGCCCACCAGCTGATACCCAACTCTTGTGCAACTCATGCCTTGCTGAGCGTGCTCCTGAACTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000470173.1
ENST00000483984.5
CDS GCA 72 bp CTTCTCTACCTCCTCCTTGAGGCACGCCTCATAGTTTaGAATCTCAGCCTCCACACACTTCAGCAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LLYLLLEARLIV*NLSLHTLQQCQ
Trigger: CTGGCACTGCTGAAGTGTGTGGAGGCTGAGATTGCAAACTATGAGGCGTGCCTCAAGGAGGAGGTAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000466093.1
ENST00000478368.1
CDS CCA 72 bp CCACCAATCTTCACACCAAAGTTCCAATCAAGAACTTaGCACCTGGGCAGGAGGAGCTCAGGCCTTACCCTC +
Preference number: 6 (lower is better)
Translates to: PPIFTPKFQSRT*HLGRRSSGLTL
Trigger: GAGGGTAAGGCCTGAGCTCCTCCTGCCCAGGTGCCAAGTTCTTGATTGGAACTTTGGTGTGAAGATTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS CCA 72 bp CCTGCCACCACCCAACCCAGAAAGTCTTCTGGCACATaGCTCCAGCCACCAATCTTCACACCAAAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: PATTQPRKSSGT*LQPPIFTPKFQ
Trigger: TTGGAACTTTGGTGTGAAGATTGGTGGCTGGAGCCATGTGCCAGAAGACTTTCTGGGTTGGGTGGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466093.1
CDS CCA 72 bp AACCAGCACTTCCCAGAGAAGAACAGCCCAGCCAGCTaGTGCAATGGGAGTCAGCAAGCTCTAAGTCATGAT +
Preference number: 6 (lower is better)
Translates to: NQHFPEKNSPAS*CNGSQQALSHD
Trigger: ATCATGACTTAGAGCTTGCTGACTCCCATTGCACCAGCTGGCTGGGCTGTTCTTCTCTGGGAAGTGCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490804.1
CDS CAA 72 bp CTGACATTTGCTCTGAAGGTCGTAGATCTCCTCCACTaGCACCCCCTTGACACCGAAATCTTCCACGAGCAG +
Preference number: 6 (lower is better)
Translates to: LTFALKVVDLLH*HPLDTEIFHEQ
Trigger: CTGCTCGTGGAAGATTTCGGTGTCAAGGGGGTGCAAGTGGAGGAGATCTACGACCTTCAGAGCAAATGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000470173.1
ENST00000483984.5
ENST00000490917.1
CDS CAA 90 bp CTAGTCTTGATGGACAGAGGAATTGAGAGGTCCTTCTGGGACTCTTaGAGCTTCTCAGCCAAGACGTTGATGGTGTTGGGCTGCAGCACT +
Preference number: 6 (lower is better)
Translates to: LVLMDRGIERSFWDS*SFSAKTLMVLGCST
Trigger: AGTGCTGCAGCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CAA 72 bp ATGGACAGAGGAATTGAGAGGTCCTTCTGGGACTCTTaGAGCTTCTCAGCCAAGACGTTGATGGTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: MDRGIERSFWDS*SFSAKTLMVLG
Trigger: GCCCAACACCATCAACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS CCA 72 bp CTAGTCTTGATGGACAGAGGAATTGAGAGGTCCTTCTaGGACTCTTTGAGCTTCTCAGCCAAGACGTTGATG +
Preference number: 6 (lower is better)
Translates to: LVLMDRGIERSF*DSLSFSAKTLM
Trigger: CATCAACGTCTTGGCTGAGAAGCTCAAAGAGTCCCAGAAGGACCTCTCAATTCCTCTGTCCATCAAGACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296288.9
ENST00000460680.6
ENST00000490804.1
CDS GCA 72 bp TCTAAGCCTGATCTTGCCAGATTCACCATATGGCCTTaGAATTTACAAATCACCTGGATACTCTCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: SKPDLARFTIWP*NLQITWILSVP
Trigger: AGGGACAGAGAGTATCCAGGTGATTTGTAAATTGCAAGGCCATATGGTGAATCTGGCAAGATCAGGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471532.5
ENST00000483984.5
CDS CAA 72 bp GACAACAAGTTGAGAACCCATGATCTAAGCCTGATCTaGCCAGATTCACCATATGGCCTTGCAATTTACAAA +
Preference number: 6 (lower is better)
Translates to: DNKLRTHDLSLI*PDSPYGLAIYK
Trigger: TTTGTAAATTGCAAGGCCATATGGTGAATCTGGCAAGATCAGGCTTAGATCATGGGTTCTCAACTTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471532.5
ENST00000483984.5