RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BANP (Homo sapiens)

Ensembl gene IDs: ENSG00000172530

Ensembl transcript IDs: ENST00000286122.11, ENST00000355022.8, ENST00000393207.5, ENST00000393208.6, ENST00000412691.5, ENST00000423252.5, ENST00000436274.5, ENST00000436970.5, ENST00000439677.5, ENST00000454563.5, ENST00000456902.5, ENST00000459966.5, ENST00000466197.5, ENST00000466847.5, ENST00000479780.6, ENST00000481948.1, ENST00000485772.5, ENST00000488074.1, ENST00000526460.1, ENST00000538234.5, ENST00000565242.1, ENST00000569400.5, ENST00000612301.1, ENST00000626016.2, ENST00000682872.1

Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGGGCGCGTGGGGGCCGGGCCGTAGGC +
Preference number: 1 (lower is better)
Translates to: RPSDALQQNTCSRCL*RGRESRARGGRAVG
Trigger: GCCTACGGCCCGGCCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 90 bp AGGCAGCGGCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGGGCCGGGCC +
Preference number: 1 (lower is better)
Translates to: RQRPSDALQQNTCSR*LCRGRESRARGGRA
Trigger: GGCCCGGCCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGCCGCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 90 bp TCCCCGCGGAGGCAGCGGCCTTCAGACGCACTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGG +
Preference number: 1 (lower is better)
Translates to: SPRRQRPSDALQQNT*SRCLCRGRESRARG
Trigger: CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGCCGCTGCCTCCGCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 90 bp GTCTCCGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAGCGGCCTTCAGACGCACTTCAGCAG +
Preference number: 1 (lower is better)
Translates to: VSGWGRRRLLFQLIG*CSPRRQRPSDALQQ
Trigger: CTGCTGAAGTGCGTCTGAAGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCGGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 90 bp ATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGC +
Preference number: 1 (lower is better)
Translates to: ISRAYATLSAPCLPS*SDTNSRTQTKGVSG
Trigger: GCCGGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR CCA 90 bp CGTCCTCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTTGTTGC +
Preference number: 1 (lower is better)
Translates to: RPRGGCLLGPAPSPQ*CSADAQAQRIALCC
Trigger: GCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
3UTR GCA 90 bp TGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCGCATCGCACTTTGTTGCACGTCTGG +
Preference number: 1 (lower is better)
Translates to: WWLSSWPGTFTTMVF*RRPGTAHRTLLHVW
Trigger: CCAGACGTGCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
3UTR CCA 90 bp TGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGCTaGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: CSDTNSRTQTKGVSG*GRRRLLFQLIGCCS
Trigger: GGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCGGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 90 bp GCCCTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCA +
Preference number: 1 (lower is better)
Translates to: ALLLKGSSILATMAF*RSLLSITVVWGTTP
Trigger: TGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
3UTR-3UTR TCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPCSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR TCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GAAAAALSVDRMLFPAEACSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR TCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 2 (lower is better)
Translates to: IVLDFPRICDALRTVPPLPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKCSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCACTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 2 (lower is better)
Translates to: GAAAAALSVDRMLFPAEALQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 2 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRLQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 2 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNLQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 2 (lower is better)
Translates to: IVLDFPRICDALRTVPPLLQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: IVLDFPRICDALRTVPPLFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGGGCGCGTGGGGGCCGG +
Preference number: 3 (lower is better)
Translates to: DALQQNTCSRCL*RGRESRARGGR
Trigger: CCGGCCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp CCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGG +
Preference number: 3 (lower is better)
Translates to: PSDALQQNTCSR*LCRGRESRARG
Trigger: CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAGCGGCCTTCAGACGCA +
Preference number: 3 (lower is better)
Translates to: WGRRRLLFQLIG*CSPRRQRPSDA
Trigger: TGCGTCTGAAGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR CCA 72 bp GGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCA +
Preference number: 3 (lower is better)
Translates to: GGCLLGPAPSPQ*CSADAQAQRIA
Trigger: TGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
3UTR CCA 72 bp GAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACAATGGTGTTCTGCCGA +
Preference number: 3 (lower is better)
Translates to: EPLSPSSWWLSS*PGTFTTMVFCR
Trigger: TCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459966.5
3UTR GCA 72 bp GCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGGACTCAAACGAAAGGG +
Preference number: 3 (lower is better)
Translates to: AYATLSAPCLPS*SDTNSRTQTKG
Trigger: CCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp TTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGACACCAACAGCAGGACT +
Preference number: 3 (lower is better)
Translates to: LISRAYATLSAP*LPSCSDTNSRT
Trigger: AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR CAA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 3 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR CCA 72 bp ACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGCTaGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGA +
Preference number: 3 (lower is better)
Translates to: TNSRTQTKGVSG*GRRRLLFQLIG
Trigger: TCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCGGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp TCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCGCATCGCACTTTGTTG +
Preference number: 3 (lower is better)
Translates to: SSWPGTFTTMVF*RRPGTAHRTLL
Trigger: CAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
3UTR-3UTR CAA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 3 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR-3UTR CAA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 3 (lower is better)
Translates to: IVLDFPRICDALRTVPPLRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR GCA 72 bp GGTCAGCAATACCCCATCGGAACCGAGAGCTGGCTTTaGAAACACCTGCCTCATGACACTGGACAGAGCACA +
Preference number: 3 (lower is better)
Translates to: GQQYPIGTESWL*KHLPHDTGQST
Trigger: TGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGATGGGGTATTGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
3UTR GCA 72 bp CAGAAAAATATCATAGTTCTTGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTC +
Preference number: 3 (lower is better)
Translates to: QKNIIVLDFPRI*DALRTVPPLVL
Trigger: GAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTATGATATTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR CCA 72 bp AAAGTAGGTCAGCAATACCCCATCGGAACCGAGAGCTaGCTTTGCAAACACCTGCCTCATGACACTGGACAG +
Preference number: 3 (lower is better)
Translates to: KVGQQYPIGTES*LCKHLPHDTGQ
Trigger: CTGTCCAGTGTCATGAGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGATGGGGTATTGCTGACCTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
3UTR GCA 72 bp CTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATTACTGTAGTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: LKGSSILATMAF*RSLLSITVVWG
Trigger: CCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466197.5
3UTR CCA 72 bp GCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTaGGGGACGACGCCACAGTTTTCAATCATGCGTTTT +
Preference number: 3 (lower is better)
Translates to: AFCRSLLSITVV*GTTPQFSIMRF
Trigger: AAAACGCATGATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR TCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCCTGTGCCGAGGCCGTaGGAGCAGGGCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRPVPRP*EQGAWG
Trigger: CCCCCACGCGCCCTGCTCTCACGGCCTCGGCACAGG...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGGCGAGGGGCTCCTGGTaGCATGGGCACCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGARGSW*HGHRSL
Trigger: CAGTGAGCGGTGCCCATGGCACCAGGAGCCCCTCGC...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGTLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGTCCCGATGCTCTGACTaGCCGCCTGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGSRCSD*PPAHSW
Trigger: CCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGA...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCACGGCGATCAGCTGTaGACCCTGCAGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGHGDQL*TLQHLA
Trigger: GGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPCAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGCCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTGGCTTCGGCCGTCTGTaGCCCGGCCGTGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTGFGRL*PGRVVT
Trigger: AGTGACCACACGGCCGGGGCACAGACGGCCGAAGCC...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGCGAGGGGCTCCTGGTaGCATGGGCACCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAARGSW*HGHRSL
Trigger: CAGTGAGCGGTGCCCATGGCACCAGGAGCCCCTCGC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRACSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNTLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACCGCCTGCCCACAGCTaGACACAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPPPAHS*TQSRWP
Trigger: AGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAVAALE*RPIHAR
Trigger: GCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGAC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRVAALE*RPIHAR
Trigger: GCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGAC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPVAALE*RPIHAR
Trigger: GCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGAC...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGTGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRACAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCCCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTLLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTCCCGATGCTCTGACTaGCCGCCTGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTSRCSD*PPAHSW
Trigger: CCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGGCTTCGGCCGTCTGTaGCCCGGCCGTGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESGFGRL*PGRVVT
Trigger: AGTGACCACACGGCCGGGGCACAGACGGCCGAAGCC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAATCTGGATGGCCCCGTaGTCGAGCTGCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPIWMAP*SSCISG
Trigger: GCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGAT...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGCGAGGGGCTCCTGGTaGCATGGGCACCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRARGSW*HGHRSL
Trigger: CAGTGAGCGGTGCCCATGGCACCAGGAGCCCCTCGC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRCSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGCCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESTLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEATLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACACGGCGATCAGCTGTaGACCCTGCAGCACCTGACC +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPHGDQL*TLQHLT
Trigger: GGTCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355022.8
ENST00000538234.5
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RAALPVLVVAVFLARHLHSPSSW*LSSWPG
Trigger: GCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGA...GTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTSPSSW*LSSWPG
Trigger: GCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAWTQSR*PPSRSP
Trigger: GGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCA...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAWTQSR*PPSRSP
Trigger: GGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCA...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCCGCCTGCCCACAGCTaGACACAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAPPAHS*TQSRWP
Trigger: AGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKVAALE*RPIHAR
Trigger: GCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGAC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNVAALE*RPIHAR
Trigger: GCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGAC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATGGATGTCGCTGCCCTaGAGTGGCGACCCATCCACG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPWMSLP*SGDPST
Trigger: CGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEACAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGTGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRCAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESCAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCCACAGCTCTGTACCTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGPQLCT*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626016.2
CDS-3UTR TCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEALLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESLLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAASCTY*TWMSLP
Trigger: GGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGC...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTCCCGATGCTCTGACTaGCCGCCTGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPSRCSD*PPAHSW
Trigger: CCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGA...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCCACGGCGATCAGCTGTaGACCCTGCAGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESHGDQL*TLQHLA
Trigger: GGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGGCTTCGGCCGTCTGTaGCCCGGCCGTGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNGFGRL*PGRVVT
Trigger: AGTGACCACACGGCCGGGGCACAGACGGCCGAAGCC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRGCSVG*RASAVC
Trigger: ACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPGCSVG*RASAVC
Trigger: ACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCC...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGCGAGGGGCTCCTGGTaGCATGGGCACCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPARGSW*HGHRSL
Trigger: CAGTGAGCGGTGCCCATGGCACCAGGAGCCCCTCGC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNCSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKTLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTACGCTCTCCGCACCGTaGCTCCCCTCGTGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPTLSAP*LPSCSD
Trigger: GTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGT...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRWTQSR*PPSRSP
Trigger: GGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCA...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESWTQSR*PPSRSP
Trigger: GGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGCCGCCTGCCCACAGCTaGACACAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPPPAHS*TQSRWP
Trigger: AGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGG...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGGCAGGGGATGCGGGTaGCCTCTAGAAGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAGRGCG*PLEADR
Trigger: ACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTGGCAGGGGATGCGGGTaGCCTCTAGAAGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTGRGCG*PLEADR
Trigger: ACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCC...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTGGATGTCGCTGCCCTaGAGTGGCGACCCATCCACG +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNWMSLP*SGDPST
Trigger: CGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGTGGATGTCGCTGCCCTaGAGTGGCGACCCATCCACG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAWMSLP*SGDPST
Trigger: CGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCA...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPLLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAASCTY*TWMSLP
Trigger: GGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPATTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGATCAGCTGTGCACCCTaGAGCACCTGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAISCAP*STWPLL
Trigger: CAGCAGTGGCCAGGTGCTGCAGGGTGCACAGCTGAT...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTCACGGCGATCAGCTGTaGACCCTGCAGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPHGDQL*TLQHLA
Trigger: GGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKGCSVG*RASAVC
Trigger: ACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPGCSVG*RASAVC
Trigger: ACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGATCTGGATGGCCCCGTaGTCGAGCTGCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPIWMAP*SSCISG
Trigger: GCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGAT...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGATCTGGATGGCCCCGTaGTCGAGCTGCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRIWMAP*SSCISG
Trigger: GCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGAT...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAATCTGGATGGCCCCGTaGTCGAGCTGCATCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAIWMAP*SSCISG
Trigger: GCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGAT...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACAACACGTGCAGCCGCTaGCTGTGCCGAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNNTCSR*LCRGRE
Trigger: CTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTT...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTDFPRI*DALRTV
Trigger: CACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATC...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGAAEFS*CLSGRC
Trigger: GCATCTCCCCGACAAACACCACGAGAATTCCGCAGC...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPWWLSS*PGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNWTQSR*PPSRSP
Trigger: GGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCCGCCTGCCCACAGCTaGACACAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNPPAHS*TQSRWP
Trigger: AGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGGCACCTGGGCGATGTaGAGGTGTCCTACTTGCACC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAGTWAM*RCPTCT
Trigger: GGTGCAAGTAGGACACCTCCACATCGCCCAGGTGCC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393207.5
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATGGATGTCGCTGCCCTaGAGTGGCGACCCATCCACG +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAWMSLP*SGDPST
Trigger: CGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGCGAGGGGCTCCTaGTGCCATGGGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPARGS*CHGHRS
Trigger: TGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCCGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
3UTR CAA 72 bp CGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCACAATGGTGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RAALPVLVVAVF*ARHLHHNGVLP
Trigger: CGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR TCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATCTTCCACTGCAATCTaGACCACATCGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPSSTAI*TTSARS
Trigger: CGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNASCTY*TWMSLP
Trigger: GGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTTCCAGGGAATCCGGTaGCCTGTTGCTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTFQGIR*PVAQGV
Trigger: GACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGATCAGCTGTGCACCCTaGAGCACCTGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRISCAP*STWPLL
Trigger: CAGCAGTGGCCAGGTGCTGCAGGGTGCACAGCTGAT...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGCTTCGGCCGTCTGTaGCCCGGCCGTGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSGFGRL*PGRVVT
Trigger: AGTGACCACACGGCCGGGGCACAGACGGCCGAAGCC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCCTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESLQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESDFPRI*DALRTV
Trigger: CACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRDFPRI*DALRTV
Trigger: CACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCACCCTGTGGGATTACTTaGACCTGTCCGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPPCGIT*TCPSSP
Trigger: CGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGG...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCACGGCGATCAGCTGTaGACCCTGCAGCACCTGACC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNHGDQL*TLQHLT
Trigger: GGTCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355022.8
ENST00000538234.5
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTWWLSS*PGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNWWLSS*PGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPASRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTSRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGGCAGGGGATGCGGGTaGCCTCTAGAAGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPGRGCG*PLEADR
Trigger: ACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGGCTTTGAAGACGGATaGGGCCAGGAGGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRGFEDG*GQEAGD
Trigger: ATCCCCTGCCTCCTGGCCCCATCCGTCTTCAAAGCC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATGGATGTCGCTGCCCTaGAGTGGCGACCCATCCACG +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKWMSLP*SGDPST
Trigger: CGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTTGTGCCCCGGCCGTGTaGTCACTCACTGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGCAPAV*SLTGAS
Trigger: GCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNLTESG*PRARAA
Trigger: TGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAG...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRALTESG*PRARAA
Trigger: TGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSLLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGCAGCACTTCCACAGCTaGACCCTCCTCACTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPQHFHS*TLLTSL
Trigger: CAGGGAAGTGAGGAGGGTTCAGCTGTGGAAGTGCTG...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538234.5
CDS-3UTR GCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTTCCAGGGAATCCGGTaGCCTGTTGCTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESFQGIR*PVAQGV
Trigger: GACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR GCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTTCCCGATGCTCTGACTaGCCGCCTGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSRCSD*PPAHSW
Trigger: CCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGA...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTCCCGATGCTCTGACTaGCCGCCTGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSSRCSD*PPAHSW
Trigger: CCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGA...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCACGGCGATCAGCTGTaGACCCTGCAGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSHGDQL*TLQHLA
Trigger: GGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTG...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTGCAGCCGCTGCCTGTaGCGAGGCCGTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLCSRCL*RGRESR
Trigger: CCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNDFPRI*DALRTV
Trigger: CACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGATTTCCCGCGCATATaGGACGCTCTCCGCACCGTG +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPDFPRI*DALRTV
Trigger: CACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPANSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGAGTATTACTGTAGTCTaGGGGACGACGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGSITVV*GTTHRT
Trigger: AGTGCGATGCGTCGTCCCCCAGACTACAGTAATACT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAAGGGGTCTTCCATCTTaGCTACAATGGCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPRGLPS*LQWRSA
Trigger: GGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCT...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSSPSSW*LSSWPG
Trigger: GCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGA...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSSPSSW*LSSWPG
Trigger: GCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGA...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGCCTGCCCACAGCTaGACACAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPPAHS*TQSRWP
Trigger: AGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRSRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGGCACCTGGGCGATGTaGAGGTGTCCTACTTGCACC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNGTWAM*RCPTCT
Trigger: GGTGCAAGTAGGACACCTCCACATCGCCCAGGTGCC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393207.5
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGGCTTTGAAGACGGATaGGGCCAGGAGGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKGFEDG*GQEAGD
Trigger: ATCCCCTGCCTCCTGGCCCCATCCGTCTTCAAAGCC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTCTCCGGCTGTAGCGTaGGCTGCAGGGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLSPAVA*AAGLRP
Trigger: CGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCACTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEALTESG*PRARAA
Trigger: TGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAG...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGGTGGAGGTGTCCCTGTaGGATTACTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAVEVSL*DYLHLS
Trigger: GGACAGGTGCAAGTAATCCCACAGGGACACCTCCAC...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGTGGAGGTGTCCCTGTaGGATTACTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAVEVSL*DYLHLS
Trigger: GGACAGGTGCAAGTAATCCCACAGGGACACCTCCAC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACGATCACCTGTCAGCCTaGCCAATGTGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNDHLSA*PMWQNP
Trigger: GGGGTTTTGCCACATTGGCCAGGCTGACAGGTGATC...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS-3UTR TCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPSSTAI*TTSARS
Trigger: CGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGA...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLLLPML*LPACPQ
Trigger: CTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSASCTY*TWMSLP
Trigger: GGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGC...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGCAAACACCTGCCTCATaGCACTGGACAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAQTPAS*HWTEHT
Trigger: TGTGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTG...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACCAAACACCTGCCTCATaGCACTGGACAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNQTPAS*HWTEHT
Trigger: TGTGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTG...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACACCTGCCTCATaGCACTGGACAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTQTPAS*HWTEHT
Trigger: TGTGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTG...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTGTTTGTCGGGGAGATaGGATAATGGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNCLSGR*DNGVRP
Trigger: AGGACGGACGCCATTATCGCATCTCCCCGACAAACA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR GCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGTGTTTGTCGGGGAGATaGGATAATGGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRACLSGR*DNGVRP
Trigger: AGGACGGACGCCATTATCGCATCTCCCCGACAAACA...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATTCCAGGGAATCCGGTaGCCTGTTGCTCAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKFQGIR*PVAQGV
Trigger: GACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLGCSVG*RASAVC
Trigger: ACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCC...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGCCCCGTGCTCGAGCTaGATCTCCGGCTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLAPCSS*ISGCSV
Trigger: CACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGC...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCCGTGCCTCCCCTCGTaGTCCGACACCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLPCLPS*SDTNSR
Trigger: CCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: RAALPVLVVAVFLARHLHEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...GTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAAGTATTACTGTAGTCTaGGGGACGACGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPSITVV*GTTHRT
Trigger: AGTGCGATGCGTCGTCCCCCAGACTACAGTAATACT...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCCATCTTGGCTACAATaGCGTTCTGCCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGPSWLQ*RSADHC
Trigger: ACAATGATCGGCAGAACGCCATTGTAGCCAAGATGG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKWWLSS*PGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLSPSSW*LSSWPG
Trigger: GCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKSRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNSRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGGCAGGGGATGCGGGTaGCCTCTAGAAGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSGRGCG*PLEADR
Trigger: ACGGTCAGCTTCTAGAGGCCACCCGCATCCCCTGCC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGATCGGAACCGAGAGCTaGCTTTGCAAACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAIGTES*LCKHLP
Trigger: AGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGAT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGATCGGAACCGAGAGCTaGCTTTGCAAACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAIGTES*LCKHLP
Trigger: AGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGAT...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGTGGAGGTGTCCCTGTaGGATTACTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESVEVSL*DYLHLS
Trigger: GGACAGGTGCAAGTAATCCCACAGGGACACCTCCAC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGAAGGCCAAGGCGGGTaGATCACCTGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSEGQGG*ITCQPG
Trigger: GCCAGGCTGACAGGTGATCCACCCGCCTTGGCCTTC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACACCCCGTCTAGGCCATaGTCACTCGGATCAGCCATC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNTPSRP*SLGSAI
Trigger: GATGGCTGATCCGAGTGACCATGGCCTAGACGGGGT...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538234.5
CDS-3UTR CCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGAACTCACAGTGGGGCTaGCTTTTGGTCACCGGCACT +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPNSQWG*LLVTGT
Trigger: AGTGCCGGTGACCAAAAGCCAGCCCCACTGTGAGTT...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538234.5
CDS-3UTR TCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLASCTY*TWMSLP
Trigger: GGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGC...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCATGGGCACCGCTCACTaGATCTGGATGGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLMGTAH*IWMAPC
Trigger: GCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCAT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAAACACCTGCCTCATaGCACTGGACAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRQTPAS*HWTEHT
Trigger: TGTGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTG...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCCAAACACCTGCCTCATaGCACTGGACAGAGCACACA +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESQTPAS*HWTEHT
Trigger: TGTGTGCTCTGTCCAGTGTCATGAGGCAGGTGTTTG...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGGTCACCGTGTGGGCTaGGGAATTCTCGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKGHRVG*GILVVF
Trigger: AAACACCACGAGAATTCCGCAGCCCACACGGTGACC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393208.6
ENST00000626016.2
CDS-3UTR GCA 90 bp TTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCAGGTCACCGTGTGGGCTaGGGAATTCTCGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LARHLHHNGVLPTPRHSAGHRVG*GILVVF
Trigger: AAACACCACGAGAATTCCGCAGCCCACACGGTGACC...TGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR GCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: WWLSSWPGTFTTMVFCRRTTMVF*RRPGTA
Trigger: CGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT...GCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCTTCAGCAGAACACGTaGAGCCGCTGCCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSLQQNT*SRCLCR
Trigger: TCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNAAEFS*CLSGRC
Trigger: GCATCTCCCCGACAAACACCACGAGAATTCCGCAGC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR CCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACCTTTTGGTCACCGTGTaGGCTGCGGAATTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNLLVTV*AAEFSW
Trigger: CCACGAGAATTCCGCAGCCCACACGGTGACCAAAAG...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTTGTTGCACAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TTMVFCRRPGTAHRTLLHSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...GTGCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GTFTTMVFCRRPGTAHRTPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...AGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGAGGGGTCTTCCATCTTaGCTACAATGGCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRRGLPS*LQWRSA
Trigger: GGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCT...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTGGCTTTGAAGACGGATaGGGCCAGGAGGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSGFEDG*GQEAGD
Trigger: ATCCCCTGCCTCCTGGCCCCATCCGTCTTCAAAGCC...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCATCGGAACCGAGAGCTaGCTTTGCAAACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESIGTES*LCKHLP
Trigger: AGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGAT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAATCGGAACCGAGAGCTaGCTTTGCAAACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAIGTES*LCKHLP
Trigger: AGGCAGGTGTTTGCAAAGCCAGCTCTCGGTTCCGAT...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGAACTCACAGTGGGGCTaGCTTTTGGTCACATCTGTC +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPANSQWG*LLVTSV
Trigger: GACAGATGTGACCAAAAGCCAGCCCCACTGTGAGTT...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS-3UTR CCA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAAGTGGGGCTGGCTTTTaGTCACCGGCACTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GAAAAALSVDRMLFPAEASGAGF*SPALSS
Trigger: TGAAGAAAGTGCCGGTGACCAAAAGCCAGCCCCACT...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538234.5
CDS-3UTR CCA 90 bp GGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGAGCTCTGTACCTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GCLLGPAPSPQWCSADAQSSVPG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCT...CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp TGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCACCACAGCTCTGTACCTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: WLSSWPGTFTTMVFCRRPPQLCT*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGG...TGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR TCA 90 bp GGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GTFTTMVFCRRPGTAHRTSSTAI*TTSARS
Trigger: CGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGA...AGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR GCA 90 bp TTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCAGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: LARHLHHNGVLPTPRHSAAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...TGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR GCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLEPGCR*PGVATH
Trigger: ATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTC...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCCATCTTGGCTACAATaGCGTTCTGCCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAPSWLQ*RSADHC
Trigger: ACAATGATCGGCAGAACGCCATTGTAGCCAAGATGG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLRVVTH*RQLHVL
Trigger: CAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSLTESG*PRARAA
Trigger: TGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTAGCTCTGTACCTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSSVPG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626016.2
CDS-3UTR TCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSSSTAI*TTSARS
Trigger: CGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGA...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSSTAI*TTSARS
Trigger: CGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGA...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCATCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR TCA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGAAATATCATAGTTCTTaGTTTCCCGCGCATATGCGA +
Preference number: 4 (lower is better)
Translates to: QNTCSRCLCRGRESRARGKYHSS*FPAHMR
Trigger: TCGCATATGCGCGGGAAATCAAGAACTATGATATTT...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCCCTGTGGGATTACTTaGACCTGTCCGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGPCGIT*TCPSSP
Trigger: CGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGG...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCTGTGGGATTACTTaGACCTGTCCGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSPCGIT*TCPSSP
Trigger: CGGAGAAGACGGACAGGTGCAAGTAATCCCACAGGG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp TGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: WLSSWPGTFTTMVFCRRPAAEFS*CLSGRC
Trigger: GCATCTCCCCGACAAACACCACGAGAATTCCGCAGC...TGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCTTTTGGTCACCGTGTaGGCTGCGGAATTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSLLVTV*AAEFSW
Trigger: CCACGAGAATTCCGCAGCCCACACGGTGACCAAAAG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp TCCTCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCGCACCTTCACCACAATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSWWLSSWPGTFTTMVFCAPSPQ*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGC...GCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp CACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTTGTTGCACGTTGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: HNGVLPTPRHSASHFVARWWLSS*PGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA...ACGTGCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCAGTAGGAGGACGAGTTaGGCGTTCTCCGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLSRRTS*AFSARS
Trigger: GCTTCTCGCGGAGAACGCCCAACTCGTCCTCCTACT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLLTESG*PRARAA
Trigger: TGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAG...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPEFNSQ*GWLLVT
Trigger: TGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS-3UTR TCA 90 bp GCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTTCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: ATLSAPCLPSCSDTNSRTSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...AGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR GCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATT +
Preference number: 4 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAATMAF*RSLLSI
Trigger: AATACTCAACAATGATCGGCAGAACGCCATTGTAGC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR GCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTTTCAGTTGATAGGATaGTGTTCCCCGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSFQLIG*CSPRRQ
Trigger: CTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAA...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CCA 90 bp ACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTTGTTGCACAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: TTMVFCRRPGTAHRTLLHNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...GTGCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCAGTGGGGCTGGCTTTTaGTCACATCTGTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSSGAGF*SHLSSQ
Trigger: CTGGGATGACAGATGTGACCAAAAGCCAGCCCCACT...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS-3UTR TCA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCTCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: DALQQNTCSRCLCRGRESSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR GCA 90 bp TCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGATGTTTGTCGGGGAGATaGGATAATGGCGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SWWLSSWPGTFTTMVFCRCLSGR*DNGVRP
Trigger: AGGACGGACGCCATTATCGCATCTCCCCGACAAACA...TCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR GCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATT +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPATMAF*RSLLSI
Trigger: AATACTCAACAATGATCGGCAGAACGCCATTGTAGC...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR GCA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTACAGCAAAGGGCTCCTaGTACTCCCCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSTAKGS*YSPGIF
Trigger: AAAAATCCCAGGGGAGTAGCAGGAGCCCTTTGCTGT...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR TCA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGAAATATCATAGTTCTTaGTTTCCCGCGCATATGCGA +
Preference number: 4 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPKYHSS*FPAHMR
Trigger: TCGCATATGCGCGGGAAATCAAGAACTATGATATTT...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR GCA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATT +
Preference number: 4 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPATMAF*RSLLSI
Trigger: AATACTCAACAATGATCGGCAGAACGCCATTGTAGC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCAGTATTACTGTAGTCTaGGGGACGACGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: IVLDFPRICDALRTVPPLSITVV*GTTHRT
Trigger: AGTGCGATGCGTCGTCCCCCAGACTACAGTAATACT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR TCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACAAATATCATAGTTCTTaGTTTCCCGCGCATATGCGA +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNKYHSS*FPAHMR
Trigger: TCGCATATGCGCGGGAAATCAAGAACTATGATATTT...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR TCA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACTCATCTGTCACTACATaGTTCTCCAAAACAATGTCC +
Preference number: 4 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNSSVTT*FSKTMS
Trigger: GGACATTGTTTTGGAGAATCATGTAGTGACAGATGA...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626016.2
CDS-3UTR TCA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTTCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
CDS-3UTR CCA 90 bp ATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTTCAATCATGCGAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IVEYYCSLGDDATVFNHASGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...CGCATGATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp ATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCAAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: MAFCRSLLSITVVWGTTPNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...TGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp CAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTAACCACCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QSLHPNSFLWDRSNVRNHPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...GTGGTTACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp GTGCCCTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCCATCTTGGCTACAATaGCGTTCTGCCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: VPCCSRGLPSWLQWRSADPSWLQ*RSADHC
Trigger: ACAATGATCGGCAGAACGCCATTGTAGCCAAGATGG...ATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp ATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTAAGTGGGGCTGGCTTTTaGTCACCGTGTGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IFSHSIPTHSYGTDLTFVSGAGF*SPCGLR
Trigger: CCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACT...TACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp CCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTTCAATCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PIIVEYYCSLGDDATVFNPEHGE*PVNTKE
Trigger: CTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGG...ATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp GGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAAGGTCCGCTTTGTTGTaGAAGGCATCGCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: GVLPIIVEYYCSLGDDATRSALL*KASHFV
Trigger: AACAAAGTGCGATGCCTTCCACAACAAAGCGGACCT...TGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
3UTR CAA 72 bp TCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGGGGGACGACGCCACAG +
Preference number: 4 (lower is better)
Translates to: SILATMAFCRSL*SITVVWGTTPQ
Trigger: CTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR GCA 90 bp CTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: LGYNGVLPIIVEYYCSLGAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...CCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp TTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: FCRSLLSITVVWGTTPQFEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...AAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp CTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGAGGGGTCTTCCATCTTaGCTACAATGGCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGYNGVLPIIVEYYCSLGRGLPS*LQWRSA
Trigger: GGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCT...CCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp CTTGACATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGAGCTCTGTACCTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LDIFSHSIPTHSYGTDLTSSVPG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCT...CGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAATGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp ATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTACCACAGCTCTGTACCTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: IFSHSIPTHSYGTDLTFVPQLCT*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGG...TACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485772.5
3UTR CAA 72 bp TCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTCTGGGGGACGACGCCA +
Preference number: 4 (lower is better)
Translates to: SSILATMAFCRS*LSITVVWGTTP
Trigger: TGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR GCA 90 bp CTTGACATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGC +
Preference number: 4 (lower is better)
Translates to: LDIFSHSIPTHSYGTDLTAQVFH*NLNHIG
Trigger: GCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...CGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAATGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp ATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTAAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: IFSHSIPTHSYGTDLTFVNSQWG*LLVTVW
Trigger: CCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTT...TACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp TCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTTCAATCATGTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLSITVVWGTTPQFSIMSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA...CATGATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp ATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTTCAATCATGCGATTCTCCAAAACAACTaGGTGGTCAGGGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: IVEYYCSLGDDATVFNHAILQNN*VVRAQV
Trigger: GACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAAT...CGCATGATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR TCA 90 bp ACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGTCATCTGTCACTACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: TMAFCRSLLSITVVWGTTSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTAGTGACAGATGA...CGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR GCA 90 bp CTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATT +
Preference number: 4 (lower is better)
Translates to: LKGSSILATMAFCRSLLSATMAF*RSLLSI
Trigger: AATACTCAACAATGATCGGCAGAACGCCATTGTAGC...ACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp ATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACC +
Preference number: 4 (lower is better)
Translates to: IFSHSIPTHSYGTDLTFVEFNSQ*GWLLVT
Trigger: GGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTC...TACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp CAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTAACCACCCCAACTCATTCCTATaGGACAGATCTAACGTTCGT +
Preference number: 4 (lower is better)
Translates to: QSLHPNSFLWDRSNVRNHPNSFL*DRSNVR
Trigger: ACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGG...GTGGTTACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CCA 90 bp CTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGAGCCTTAGCACTTTCTaGTCACAAGGGATATCTAAG +
Preference number: 4 (lower is better)
Translates to: LGYNGVLPIIVEYYCSLGSLSTF*SQGISK
Trigger: CTTAGATATCCCTTGTGACCAGAAAGTGCTAAGGCT...CCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp TCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAAGTATTACTGTAGTCTaGGGGACGACGCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: SSILATMAFCRSLLSITVSITVV*GTTPQF
Trigger: AAACTGTGGCGTCGTCCCCCAGACTACAGTAATACT...TACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CCA 90 bp ATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCGTACACTTGCATGAGAACTaGCTTGACATTTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IFSHSIPTHSYGTDLTFVHLHEN*LDIFSH
Trigger: GTGACTGAAAATGTCAAGCCAGTTCTCATGCAAGTG...TACGAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS CCA 90 bp TGGCGCCAGCTGCACGTACTGAACCTGGATGTCGCTGCCCTGGAGTaGCGACCCATCCACGCCCGCCGCCGCGGGGTCCGAGGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: WRQLHVLNLDVAALE*RPIHARRRGVRGGH
Trigger: GTGGCCTCCTCGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS GCA 90 bp GCCGCCGCGGGGTCCGAGGAGGCCACGGCGATCAGCTGTGCACCCTaGAGCACCTGGCCACTGCTGGCTTTGAAGACGGATGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AAAGSEEATAISCAP*STWPLLALKTDGAR
Trigger: CCTGGCCCCATCCGTCTTCAAAGCCAGCAGTGGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCCCGCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
ENST00000682872.1
CDS GCA 90 bp GGTCACTCACTGGCGCCAGCTGCACGTACTGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCATCCACGCCCGCCGCCGCGGGGTCCG +
Preference number: 5 (lower is better)
Translates to: GHSLAPAARTEPGCR*PGVATHPRPPPRGP
Trigger: CGGACCCCGCGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS TCA 90 bp TGTGCCCCGGCCGTGTGGTCACTCACTGGCGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCCTGGAGTGGCGACCCATCCACGCCC +
Preference number: 5 (lower is better)
Translates to: CAPAVWSLTGASCTY*TWMSLPWSGDPSTP
Trigger: GGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 90 bp CTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTTaGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LASEPLSPSSWWLSS*PGTFTTMVFCRRPG
Trigger: GCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 90 bp CTGCAGGGCTTCGGCCGTCTGTGCCCCGGCCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTGAACCTGGATGTCGCTGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LQGFGRLCPGRVVTH*RQLHVLNLDVAALE
Trigger: CTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 90 bp GGCGAGGGGCTCCTGGTGCCATGGGCACCGCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCATCTCCGGCTGTAGCGTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GEGLLVPWAPLTESG*PRARAASPAVAWAA
Trigger: TGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCATGGCACCAGGAGCCCCTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS-3UTR CAA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS CCA 90 bp CGATGCTCTGACTGCCCGCCTGCCCACAGCTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: RCSDCPPAHSWTQSR*PPSRSPRPRGGCLL
Trigger: AAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS-3UTR CAA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS TCA 90 bp TCCTATGTGTGTGTCGCCCAGCTTCCCCGAAGGGGGACGCCTTGCTaGGCTGTGCGGCATCACCACGCCAGGTCACGGGCTGCACGCAAG +
Preference number: 5 (lower is better)
Translates to: SYVCVAQLPRRGTPC*AVRHHHARSRAARK
Trigger: CTTGCGTGCAGCCCGTGACCTGGCGTGGTGATGCCGCACAGCTCAGCAAGGCGTCCCCCTTCGGGGAAGCTGGGCGACACACACATAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565242.1
CDS CCA 90 bp CGCAGGAAAGTGAGGCCCAGTTCCAAGATGGGCGGAAGTGAGTCCTaGTGGCAGAGAGCCCCGCTGGCCCTCCCGACCTTGTACCGCCTC +
Preference number: 5 (lower is better)
Translates to: RRKVRPSSKMGGSES*WQRAPLALPTLYRL
Trigger: GAGGCGGTACAAGGTCGGGAGGGCCAGCGGGGCTCTCTGCCACCAGGACTCACTTCCGCCCATCTTGGAACTGGGCCTCACTTTCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS-3UTR CAA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACAGTGGGGCTGGCTTTaGGTCACCGTGTGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKQWGWL*VTVWAA
Trigger: CGCAGCCCACACGGTGACCAAAAGCCAGCCCCACTG...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CAA 90 bp CAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCGTGGGCGCCCAGGCACAGCGTaGCTAATGACATTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QNTCSRCLCRGRESRARGRPGTA*LMTFSR
Trigger: CCTGGAAAATGTCATTAGCAACGCTGTGCCTGGGCG...CCCACGCGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp CCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: PAHMRRSPHRASPRAPTPTAHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGT...TGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS CCA 90 bp GACACAGAGTCGCTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: DTESLASEPLSPSSW*LSSWPGTFTTMVFC
Trigger: GCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 90 bp CTGGACACAGAGTCGCTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTaGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LDTESLASEPLSPSS*WLSSWPGTFTTMVF
Trigger: GAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 90 bp AGGAAAGTGAGGCCCAGTTCCAAGATGGGCGGAAGTGAGTCCTGGTaGCAGAGAGCCCCGCTGGCCCTCCCGACCTTGTACCGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RKVRPSSKMGGSESW*QRAPLALPTLYRLP
Trigger: TGGGAGGCGGTACAAGGTCGGGAGGGCCAGCGGGGCTCTCTGCCACCAGGACTCACTTCCGCCCATCTTGGAACTGGGCCTCACTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS-3UTR CAA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACACGACGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNTTHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGTCGT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACACAGCGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNTAHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS TCA 90 bp TCTTCCGAGTTCAGGGTGATGAGCGTGACGTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAGCTGGACACAGAGTCGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSEFRVMSVTLLPML*LPACPQLDTESLAS
Trigger: GGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTCGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS-3UTR CAA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCAGTGGGGCTGGCTTTaGGTCACCGTGTGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGQWGWL*VTVWAA
Trigger: CGCAGCCCACACGGTGACCAAAAGCCAGCCCCACTG...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CAA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCACGACGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: DALQQNTCSRCLCRGRESTTHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGTCGT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp TGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGGAATCCGGTGCCCTGTaGCTCAAGGGGTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: WGRRRLLFQLIGCCSPRRESGAL*LKGSSI
Trigger: GATGGAAGACCCCTTGAGCAACAGGGCACCGGATTC...CCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp GGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: GTFTTMVFCRRPGTAHRTVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...AGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CAA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: RLGAAAAALSVDRMLFPARLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp GACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCACAGCGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: DALQQNTCSRCLCRGRESTAHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGT...GCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000626016.2
CDS-3UTR CAA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGCAGTGGGGCTGGCTTTaGGTCACATCTGTCATCCCA +
Preference number: 5 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAQWGWL*VTSVIP
Trigger: TGGGATGACAGATGTGACCAAAAGCCAGCCCCACTG...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS TCA 90 bp AGGAGATGCATCCCACACCTCCACACAGAACCGCACTCTGTGCACTaGGAGTCTCACCGGTGGCCCTGGGAAGAGGAGCAGCCCGTCGCA +
Preference number: 5 (lower is better)
Translates to: RRCIPHLHTEPHSVH*ESHRWPWEEEQPVA
Trigger: TGCGACGGGCTGCTCCTCTTCCCAGGGCCACCGGTGAGACTCTCAGTGCACAGAGTGCGGTTCTGTGTGGAGGTGTGGGATGCATCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS-3UTR CAA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAAGGGGTCTTCCATCTaGGCTACAATGGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNKGSSI*ATMAFC
Trigger: GCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTT...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAGAATCCGGTGCCCTGTaGCTCAAGGGGTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKESGAL*LKGSSI
Trigger: GATGGAAGACCCCTTGAGCAACAGGGCACCGGATTC...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGVVAVF*ARHLHH
Trigger: GTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCAC...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp GCCTTCAGACGCACTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: AFRRTSAEHVQPLPVPRPRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...CGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAGTGCGTCTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATCCCTGTGGGATTACTaGCACCTGTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GAAAAALSVDRMLFPAEASLWDY*HLSVFS
Trigger: GGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS GCA 90 bp GTATTCTGGAGCCCACCACGTGCAGCCAGACTAAACCCAAGGACATaGCGAGGCCCTTCCACAAACAGCCCCGGGTCCAGAGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VFWSPPRAARLNPRT*RGPSTNSPGSRESR
Trigger: CCTGGACTCTCTGGACCCGGGGCTGTTTGTGGAAGGGCCTCGGCATGTCCTTGGGTTTAGTCTGGCTGCACGTGGTGGGCTCCAGAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS-3UTR CAA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATCCCTGTGGGATTACTaGCACCTGTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKSLWDY*HLSVFS
Trigger: GGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp CGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCAGCGGCCTTCCCTGTGGGATTACTaGCACCTGTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRLLFQLIGCCSPRRQRPSLWDY*HLSVFS
Trigger: GGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGA...AGGCCGCTGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS TCA 90 bp AGGGAGTCCCAGGCGAGCCCACCGGGACGTGCAGAGGCGGAAACCTaGGCTTGTCTACGACTACAACCAAAGCAGGCTGAGCTTGCCTAT +
Preference number: 5 (lower is better)
Translates to: RESQASPPGRAEAET*ACLRLQPKQAELAY
Trigger: ATAGGCAAGCTCAGCCTGCTTTGGTTGTAGTCGTAGACAAGCTCAGGTTTCCGCCTCTGCACGTCCCGGTGGGCTCGCCTGGGACTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 90 bp GGGGGCTTCTGGGACAGCACTTCATCCTCTGCACGGGGGTCAGGATaGAGGGTGGCGGAGAGTGTTTCTCTACTTCCTGAGGATGGAGAC +
Preference number: 5 (lower is better)
Translates to: GGFWDSTSSSARGSG*RVAESVSLLPEDGD
Trigger: GTCTCCATCCTCAGGAAGTAGAGAAACACTCTCCGCCACCCTCCATCCTGACCCCCGTGCAGAGGATGAAGTGCTGTCCCAGAAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS-3UTR CAA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAAT +
Preference number: 5 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAEFSWC*SGRCDN
Trigger: ATTATCGCATCTCCCCGACAAACACCACGAGAATTC...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR CAA 90 bp CGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAAT +
Preference number: 5 (lower is better)
Translates to: RAYATLSAPCLPSCSDTNEFSWC*SGRCDN
Trigger: ATTATCGCATCTCCCCGACAAACACCACGAGAATTC...GTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286122.11
ENST00000393208.6
CDS-3UTR CAA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTACGACGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGTTHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGTCGT...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAAAAGGGGTCTTCCATCTaGGCTACAATGGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKKGSSI*ATMAFC
Trigger: GCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTT...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCGAATCCGGTGCCCTGTaGCTCAAGGGGTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSESGAL*LKGSSI
Trigger: GATGGAAGACCCCTTGAGCAACAGGGCACCGGATTC...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp CGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCAGTGGGGCTGGCTTTaGGTCACCGGCACTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RASPRAPTPTAGLKRKGSQWGWL*VTGTFF
Trigger: GAAGAAAGTGCCGGTGACCAAAAGCCAGCCCCACTG...AGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538234.5
CDS-3UTR CAA 90 bp CGGCTGGGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: RLGAAAAALSVDRMLFPAAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...CGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCCCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp TGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCTCCCGCCCAGGCACAGCGTaGCTAATGACATTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLPSCSDTNSRTQTKGVSRPGTA*LMTFSR
Trigger: CCTGGAAAATGTCATTAGCAACGCTGTGCCTGGGCG...GGAGACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTCGGCTGCTCTTTCAGTaGATAGGATGCTGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGRLLFQ*IGCCSP
Trigger: CGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCG...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS-3UTR CAA 90 bp CACAATGGTGTTCTGCCGACGCCCAGGCACAGCGCATCGCACTTTGTTGCACGTACAGCGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: HNGVLPTPRHSASHFVARTAHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCGCTGT...ACGTGCAACAAAGTGCGATGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS TCA 90 bp AGCTCTGTACCTGGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCGTGTTCCGACATCATCCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: SSVPGWSGLRSSTAI*TTSARSCSDIIQST
Trigger: CGTGCTCTGGATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000485772.5
ENST00000626016.2
CDS TCA 90 bp GGCACATCCTGTCTCCCCATCGCTCTCAAGTCGCATCAGATCCAGTaGGAGAGTGCCATCGAGTCTCTGCTGGATCTGCAACTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: GTSCLPIALKSHQIQ*ESAIESLLDLQLRP
Trigger: AGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCGACTTGAGAGCGATGGGGAGACAGGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS TCA 90 bp GCAACTCCAAACAGGGCAATTACCTGTTCCACATCAACAACTGTGTaGCCCGGGCCCTCCCCGGTCAGGGTGCAAGCTCGCTACCCTTCA +
Preference number: 5 (lower is better)
Translates to: ATPNRAITCSTSTTV*PGPSPVRVQARYPS
Trigger: TGAAGGGTAGCGAGCTTGCACCCTGACCGGGGAGGGCCCGGGTCACACAGTTGTTGATGTGGAACAGGTAATTGCCCTGTTTGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS GCA 90 bp GTCCCACAGCTCTGTACCTGGGTGGTCAGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGCCAGGTCGTGTTCCGACATCATCCA +
Preference number: 5 (lower is better)
Translates to: VPQLCTWVVRAQVFH*NLNHIGQVVFRHHP
Trigger: TGGATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000485772.5
ENST00000626016.2
CDS GCA 90 bp CTGTCTCCCCATCGCTCTCAAGTCGCATCAGATCCAGTGAGAGAGTaGCATCGAGTCTCTGCTGGATCTGCAACTCCGCCCTCAAGCACC +
Preference number: 5 (lower is better)
Translates to: LSPHRSQVASDPVRE*HRVSAGSATPPSST
Trigger: GGTGCTTGAGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCGACTTGAGAGCGATGGGGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS GCA 90 bp AGGGCTGGAGAGAGGCACAAGCTGAGTTTGCAGTCCAGAGCGCCTTaGTTAGAGTGTGGAGTCCACTCACATGGAGGGAAAGGGTGCGTG +
Preference number: 5 (lower is better)
Translates to: RAGERHKLSLQSRAP*LECGVHSHGGKGCV
Trigger: CACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTCTCCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 90 bp CACATCGGCCAGGTCGTGTTCCGACATCATCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAGTTCAACTCACAGTGGGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: HIGQVVFRHHPEHGE*PVNTKEFNSQWGWL
Trigger: AAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGGATGATGTCGGAACACGACCTGGCCGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000423252.5
ENST00000436274.5
ENST00000436970.5
ENST00000439677.5
ENST00000454563.5
ENST00000456902.5
ENST00000459966.5
ENST00000466197.5
ENST00000479780.6
ENST00000485772.5
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS-3UTR CAA 90 bp CTTCAGCAGAACACGTGCAGCCGCTGCCTGTGCCGAGGCCGTGAGAGCAGGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LQQNTCSRCLCRGRESRAFCRSL*SITVVW
Trigger: CCAGACTACAGTAATACTCAACAATGATCGGCAGAA...CGCCCTGCTCTCACGGCCTCGGCACAGGCAGCGGCTGCACGTGTTCTGCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCTCCCTGTGGGATTACTaGCACCTGTCCGTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: IVLDFPRICDALRTVPPLSLWDY*HLSVFS
Trigger: GGAGAAGACGGACAGGTGCAAGTAATCCCACAGGGA...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355022.8
ENST00000393208.6
ENST00000538234.5
ENST00000626016.2
CDS TCA 90 bp CTACATGATTCTCCAAAACAACTGCTGCTGCGGCGGGTCCTGCCCTaGGGTTCCGGAGCGCTTGGTGGCGTTTTCCCTGACATAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LHDSPKQLLLRRVLP*GSGALGGVFPDISG
Trigger: ACCACTTATGTCAGGGAAAACGCCACCAAGCGCTCCGGAACCTCAGGGCAGGACCCGCCGCAGCAGCAGTTGTTTTGGAGAATCATGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488074.1
CDS GCA 90 bp TGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCGTTGCTAATGACATTTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WWLSSWPGTFTTMVF*RRPGTALLMTFSRE
Trigger: TTCCCTGGAAAATGTCATTAGCAACGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS GCA 90 bp CTTGTACAACAGACAAAGGGAGTCCCAGGCGAGCCCACCGGGACGTaGAGAGGCGGAAACCTGAGCTTGTCTACGACTACAACCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LVQQTKGVPGEPTGT*RGGNLSLSTTTTKA
Trigger: TGCTTTGGTTGTAGTCGTAGACAAGCTCAGGTTTCCGCCTCTGCACGTCCCGGTGGGCTCGCCTGGGACTCCCTTTGTCTGTTGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 90 bp CTGAGCTTGCCTATGATTACAACCAAAGCAGGCGGCTCTGCAGGCTaGGAAGGCCACGTACCAATCACTCGCCCCATTCTTCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSLPMITTKAGGSAG*EGHVPITRPILLLQ
Trigger: CTGCAGGAGAAGAATGGGGCGAGTGATTGGTACGTGGCCTTCCCAGCCTGCAGAGCCGCCTGCTTTGGTTGTAATCATAGGCAAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 90 bp GAGGCACAAGCTGAGTTTGCAGTCCAGAGCGCCTTGCTTAGAGTGTaGAGTCCACTCACATGGAGGGAAAGGGTGCGTGCGATAGCTGAC +
Preference number: 5 (lower is better)
Translates to: EAQAEFAVQSALLRV*SPLTWRERVRAIAD
Trigger: GTCAGCTATCGCACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS-3UTR CAA 90 bp GGGGCGGCGGCGGCTGCTCTTTCAGTTGATAGGATGCTGTTCCCCGCGGAGGCATTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: GAAAAALSVDRMLFPAEAFCRSL*SITVVW
Trigger: CCAGACTACAGTAATACTCAACAATGATCGGCAGAA...TGCCTCCGCGGGGAACAGCATCCTATCAACTGAAAGAGCAGCCGCCGCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp GCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: ALRTVPPLVLRHQQQDSNAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...GTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS-3UTR CAA 90 bp ATAGTTCTTGATTTCCCGCGCATATGCGACGCTCTCCGCACCGTGCCTCCCCTCAAGGGGTCTTCCATCTaGGCTACAATGGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IVLDFPRICDALRTVPPLKGSSI*ATMAFC
Trigger: GCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTT...GAGGGGAGGCACGGTGCGGAGAGCGTCGCATATGCGCGGGAAATCAAGAACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS TCA 90 bp TCCAAAACAACTGGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCGTGTTCCGACATCATCCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: SKTTGWSGLRSSTAI*TTSARSCSDIIQST
Trigger: CGTGCTCTGGATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000423252.5
ENST00000436274.5
ENST00000436970.5
ENST00000456902.5
ENST00000466197.5
ENST00000479780.6
ENST00000538234.5
ENST00000682872.1
CDS GCA 90 bp AAGCAGGCTGAGCTTGCCTATGATTACAACCAAAGCAGGCGGCTCTaGAGGCTGGGAAGGCCACGTACCAATCACTCGCCCCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: KQAELAYDYNQSRRL*RLGRPRTNHSPHSS
Trigger: AGAAGAATGGGGCGAGTGATTGGTACGTGGCCTTCCCAGCCTGCAGAGCCGCCTGCTTTGGTTGTAATCATAGGCAAGCTCAGCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS GCA 90 bp GGAGGTTCCACTGAGGCTGGTGGCTGGGTTACTTCGTGGCAAAAGTaGCTTACAAACACTCCAAGGAGGAGCCTTGGCAAAATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: GGSTEAGGWVTSWQK*LTNTPRRSLGKMAA
Trigger: CGCTGCCATTTTGCCAAGGCTCCTCCTTGGAGTGTTTGTAAGGCACTTTTGCCACGAAGTAACCCAGCCACCAGCCTCAGTGGAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 90 bp GAATGTCATCTACTTTCTGCATCCGTGTGGGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGCGATAATGGCGTCCGTCCTCGCGAG +
Preference number: 5 (lower is better)
Translates to: ECHLLSASVWAAEFS*CLSGRCDNGVRPRE
Trigger: CTCGCGAGGACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGATGCAGAAAGTAGATGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS-3UTR CAA 90 bp CGCTCTCCGCACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAATTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RSPHRASPRAPTPTAGLKFCRSL*SITVVW
Trigger: CCAGACTACAGTAATACTCAACAATGATCGGCAGAA...TTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGTGCGGAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS GCA 90 bp ACGCCCAGGCACAGCGTTGCTAATGACATTTTCCAGGGAATCCGGTaGCCTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTT +
Preference number: 5 (lower is better)
Translates to: TPRHSVANDIFQGIR*PVAQGVFHLGYNGV
Trigger: AACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAAAATGTCATTAGCAACGCTGTGCCTGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CCA 90 bp GTAGTGCGAGTTCCAGCATCGCCATCAGGCCCTGGAGTACATTCCTaGGCAGAACAGGCAACTCCAAACAGGGCAATTACCTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: VVRVPASPSGPGVHS*AEQATPNRAITCST
Trigger: TGTGGAACAGGTAATTGCCCTGTTTGGAGTTGCCTGTTCTGCCCAGGAATGTACTCCAGGGCCTGATGGCGATGCTGGAACTCGCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS-3UTR CAA 90 bp TCGTGGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGAGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAAT +
Preference number: 5 (lower is better)
Translates to: SWWLSSWPGTFTTMVFCREFSWC*SGRCDN
Trigger: ATTATCGCATCTCCCCGACAAACACCACGAGAATTC...TCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459966.5
CDS-3UTR CAA 90 bp ACCGTGCCTCCCCTCGTGCTCCGACACCAACAGCAGGACTCAAACGAAAGGGGTGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: TVPPLVLRHQQQDSNERGAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...ACCCCTTTCGTTTGAGTCCTGCTGTTGGTGTCGGAGCACGAGGGGAGGCACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
CDS GCA 90 bp TTTTGGTCACCTGGTTCAAAACAGGGTATTCTGGAGCCCACCACGTaGAGCCAGACTAAACCCAAGGACATGCCGAGGCCCTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: FWSPGSKQGILEPTT*SQTKPKDMPRPFHK
Trigger: TTTGTGGAAGGGCCTCGGCATGTCCTTGGGTTTAGTCTGGCTGCACGTGGTGGGCTCCAGAATACCCTGTTTTGAACCAGGTGACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS GCA 90 bp CTCTCAAGTCGCATCAGATCCAGTGAGAGAGTGCCATCGAGTCTCTaGTGGATCTGCAACTCCGCCCTCAAGCACCTACAGAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LSSRIRSSERVPSSL*WICNSALKHLQSRK
Trigger: TTTTCTGCTCTGTAGGTGCTTGAGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCGACTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS CCA 90 bp GAGCACGGAGAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCTGGTTCAAAACAGGGTATTCTGGA +
Preference number: 5 (lower is better)
Translates to: EHGEWPVNTKEFNSQ*GWLLVTWFKTGYSG
Trigger: TCCAGAATACCCTGTTTTGAACCAGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTCTCCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS CCA 90 bp TTTGCAGTCCAGAGCGCCTTGCTTAGAGTGTGGAGTCCACTCACATaGAGGGAAAGGGTGCGTGCGATAGCTGACACAGAATATTCCCTC +
Preference number: 5 (lower is better)
Translates to: FAVQSALLRVWSPLT*RERVRAIADTEYSL
Trigger: GAGGGAATATTCTGTGTCAGCTATCGCACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS-3UTR CAA 90 bp ACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGGAATCCGGTGCCCTGTaGCTCAAGGGGTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: TMAFCRSLLSITVVWGTTESGAL*LKGSSI
Trigger: GATGGAAGACCCCTTGAGCAACAGGGCACCGGATTC...CGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CAA 90 bp ACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGGGAAGGCATCGCACTTaGTTGCACGTCTGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TMAFCRSLLSITVVWGTTGRHRT*LHVWVA
Trigger: GGCAACCCAGACGTGCAACAAAGTGCGATGCCTTCC...CGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS TCA 90 bp AGTGTGGAGTCCACTCACATGGAGGGAAAGGGTGCGTGCGATAGCTaGCACAGAATATTCCCTCCGGCAGTGGGGACAAAACATGTTCTA +
Preference number: 5 (lower is better)
Translates to: SVESTHMEGKGACDS*HRIFPPAVGTKHVL
Trigger: TAGAACATGTTTTGTCCCCACTGCCGGAGGGAATATTCTGTGTCAGCTATCGCACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS GCA 90 bp ATGATTCTCCAAAACAACTGGGTGGTCAGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGCCAGGTCGTGTTCCGACATCATCCA +
Preference number: 5 (lower is better)
Translates to: MILQNNWVVRAQVFH*NLNHIGQVVFRHHP
Trigger: TGGATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGTTTTGGAGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000436274.5
ENST00000436970.5
ENST00000456902.5
ENST00000466197.5
ENST00000479780.6
ENST00000538234.5
ENST00000682872.1
CDS GCA 90 bp GCCCTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCAT +
Preference number: 5 (lower is better)
Translates to: ALLLKGSSILATMAF*RSLLSITVVWGTTH
Trigger: ATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS-3UTR CAA 90 bp CTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGAAGGGGTCTTCCATCTaGGCTACAATGGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLLKGSSILATMAFCRSLKGSSI*ATMAFC
Trigger: GCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTT...CAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CAA 90 bp ATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACTAAGGTCCGCTTTGTaGTGGAAGGCATCGCACTTT +
Preference number: 5 (lower is better)
Translates to: MAFCRSLLSITVVWGTTPLRSAL*WKASHF
Trigger: AAAGTGCGATGCCTTCCACAACAAAGCGGACCTTAG...TGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS TCA 90 bp AGGAGGAGCCTTGGCAAAATGGCAGCGCTGGGACAGGTGTTGATCTaGAGATGGGACTTGTCCTTTTTCAACATGAAGATCAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: RRSLGKMAALGQVLI*RWDLSFFNMKISSK
Trigger: TTTGGAGCTGATCTTCATGTTGAAAAAGGACAAGTCCCATCTTCAGATCAACACCTGTCCCAGCGCTGCCATTTTGCCAAGGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS TCA 90 bp CTTCAAAGCCCACACTCGCTCCACTTGCTCACAGTTCTTCAGGGATaGTGTATTTCTCCAATAGCAAGACAACCCCTACCATCTCATCAG +
Preference number: 5 (lower is better)
Translates to: LQSPHSLHLLTVLQG*CISPIARQPLPSHQ
Trigger: CTGATGAGATGGTAGGGGTTGTCTTGCTATTGGAGAAATACATCATCCCTGAAGAACTGTGAGCAAGTGGAGCGAGTGTGGGCTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS CCA 90 bp ATCAGTCCTCTATCAAGGCAATCTCTCCAATTTGCTCACACAGTGTaGATGGAATGTCATCTACTTTCTGCATCCGTGTGGGCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: ISPLSRQSLQFAHTV*MECHLLSASVWAAE
Trigger: TTCCGCAGCCCACACGGATGCAGAAAGTAGATGACATTCCATCCACACTGTGTGAGCAAATTGGAGAGATTGCCTTGATAGAGGACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS-3UTR CAA 90 bp CCTGTTGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: PVAQGVFHLGYNGVLPIIFCRSL*SITVVW
Trigger: CCAGACTACAGTAATACTCAACAATGATCGGCAGAA...AATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS-3UTR CAA 90 bp CCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCCACAGTTTTCAATTATCTAAGGTCCGCTTaGTTGTGGAAGGCATCGCAC +
Preference number: 5 (lower is better)
Translates to: PIIVEYYCSLGDDATVFNYLRSA*LWKASH
Trigger: GTGCGATGCCTTCCACAACAAAGCGGACCTTAGATA...ATTGAAAACTGTGGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS GCA 90 bp CTAGGGACGCACGCCTTTTGTCTCCACCTCCACCTCAATCACGGCTaGATTCAAATATTAATACTTGCCCATGTAAGAATTCTTAGCATC +
Preference number: 5 (lower is better)
Translates to: LGTHAFCLHLHLNHG*IQILILAHVRILSI
Trigger: GATGCTAAGAATTCTTACATGGGCAAGTATTAATATTTGAATGCAGCCGTGATTGAGGTGGAGGTGGAGACAAAAGGCGTGCGTCCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS-3UTR CAA 90 bp GACATTTTCAGTCACTCCATCCCAACTCATTCCTATGGGACAGATCTAACGTTCTGCATGAGAACTGGCTaGACATTTTCAGTCACTCCA +
Preference number: 5 (lower is better)
Translates to: DIFSHSIPTHSYGTDLTFCMRTG*TFSVTP
Trigger: TGGAGTGACTGAAAATGTCAAGCCAGTTCTCATGCA...GAACGTTAGATCTGTCCCATAGGAATGAGTTGGGATGGAGTGACTGAAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485772.5
CDS-3UTR CAA 90 bp TCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTAGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: SSILATMAFCRSLLSITVAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...TACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS GCA 90 bp ATCAGTGAAAAACATCAGTCCTCTATCAAGGCAATCTCTCCAATTTaGTCACACAGTGTGGATGGAATGTCATCTACTTTCTGCATCCGT +
Preference number: 5 (lower is better)
Translates to: ISEKHQSSIKAISPI*SHSVDGMSSTFCIR
Trigger: ACGGATGCAGAAAGTAGATGACATTCCATCCACACTGTGTGAGCAAATTGGAGAGATTGCCTTGATAGAGGACTGATGTTTTTCACTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS TCA 90 bp AGCTGCGTGTTAAATGACCAGATCCAGTTTTTATTTGACGTTTCCTaGGCTTACTCAGAACCACTCACTACTCCAAGTTATTTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SCVLNDQIQFLFDVS*AYSEPLTTPSYFSV
Trigger: GACAGAAAAATAACTTGGAGTAGTGAGTGGTTCTGAGTAAGCTCAGGAAACGTCAAATAAAAACTGGATCTGGTCATTTAACACGCAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS GCA 72 bp CCGTGCTCGAGCTGCATCTCCGGCTGTAGCGTGGGCTaGAGGGCTTCGGCCGTCTGTGCCCCGGCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: PCSSCISGCSVG*RASAVCAPAVW
Trigger: CCACACGGCCGGGGCACAGACGGCCGAAGCCCTGCAGCCCACGCTACAGCCGGAGATGCAGCTCGAGCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp GACTGCCCGCCTGCCCACAGCTGGACACAGAGTCGCTaGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: DCPPAHSWTQSR*PPSRSPRPRGG
Trigger: GCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS GCA 72 bp CTGGCGCCAGCTGCACGTACTGAACCTGGATGTCGCTaGCCTGGAGTGGCGACCCATCCACGCCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LAPAARTEPGCR*PGVATHPRPPP
Trigger: CGGCGGCGGGCGTGGATGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS GCA 72 bp CCCAGCTTCCCCGAAGGGGGACGCCTTGCTGAGCTGTaGGGCATCACCACGCCAGGTCACGGGCTGCACGCA +
Preference number: 6 (lower is better)
Translates to: PSFPEGGRLAEL*GITTPGHGLHA
Trigger: TGCGTGCAGCCCGTGACCTGGCGTGGTGATGCCGCACAGCTCAGCAAGGCGTCCCCCTTCGGGGAAGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565242.1
CDS CAA 90 bp GCTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTGGCTGTCTTCTaGGCCCGGCACCTTCACCACAATGGTGTTCTGCCGACGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AGLRAALPVLVVAVF*ARHLHHNGVLPTPR
Trigger: CCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS TCA 72 bp TGTGTCGCCCAGCTTCCCCGAAGGGGGACGCCTTGCTaGGCTGTGCGGCATCACCACGCCAGGTCACGGGCT +
Preference number: 6 (lower is better)
Translates to: CVAQLPRRGTPC*AVRHHHARSRA
Trigger: AGCCCGTGACCTGGCGTGGTGATGCCGCACAGCTCAGCAAGGCGTCCCCCTTCGGGGAAGCTGGGCGACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565242.1
CDS CCA 72 bp GAGTCGCTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTaGTGGCTGTCTTCTTGGCCCGGCACCTTCACCACA +
Preference number: 6 (lower is better)
Translates to: ESLASEPLSPSS*WLSSWPGTFTT
Trigger: TGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CAA 90 bp GACGTCCTATGTGTGTGTCGCCCAGCTTCCCCGAAGGGGGACGCCTaGCTGAGCTGTGCGGCATCACCACGCCAGGTCACGGGCTGCACG +
Preference number: 6 (lower is better)
Translates to: DVLCVCRPASPKGDA*LSCAASPRQVTGCT
Trigger: CGTGCAGCCCGTGACCTGGCGTGGTGATGCCGCACAGCTCAGCAAGGCGTCCCCCTTCGGGGAAGCTGGGCGACACACACATAGGACGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565242.1
CDS CCA 72 bp TCGCTGGCCTCCGAGCCGCTCTCCCCGTCCTCGTGGTaGCTGTCTTCTTGGCCCGGCACCTTCACCACAATG +
Preference number: 6 (lower is better)
Translates to: SLASEPLSPSSW*LSSWPGTFTTM
Trigger: CATTGTGGTGAAGGTGCCGGGCCAAGAAGACAGCCACCACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp TGGGCGGAAGTGAGTCCTGGTGGCAGAGAGCCCCGCTaGCCCTCCCGACCTTGTACCGCCTCCCAGAGTATG +
Preference number: 6 (lower is better)
Translates to: WAEVSPGGREPR*PSRPCTASQSM
Trigger: CATACTCTGGGAGGCGGTACAAGGTCGGGAGGGCCAGCGGGGCTCTCTGCCACCAGGACTCACTTCCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS CCA 72 bp GTGAGGCCCAGTTCCAAGATGGGCGGAAGTGAGTCCTaGTGGCAGAGAGCCCCGCTGGCCCTCCCGACCTTG +
Preference number: 6 (lower is better)
Translates to: VRPSSKMGGSES*WQRAPLALPTL
Trigger: CAAGGTCGGGAGGGCCAGCGGGGCTCTCTGCCACCAGGACTCACTTCCGCCCATCTTGGAACTGGGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS CAA 72 bp TGTGTGTGTCGCCCAGCTTCCCCGAAGGGGGACGCCTaGCTGAGCTGTGCGGCATCACCACGCCAGGTCACG +
Preference number: 6 (lower is better)
Translates to: CVCRPASPKGDA*LSCAASPRQVT
Trigger: CGTGACCTGGCGTGGTGATGCCGCACAGCTCAGCAAGGCGTCCCCCTTCGGGGAAGCTGGGCGACACACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565242.1
CDS TCA 72 bp GCCGTGTGGTCACTCACTGGCGCCAGCTGCACGTACTaGACCTGGATGTCGCTGCCCTGGAGTGGCGACCCA +
Preference number: 6 (lower is better)
Translates to: AVWSLTGASCTY*TWMSLPWSGDP
Trigger: TGGGTCGCCACTCCAGGGCAGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS TCA 72 bp CTCAGCCCTGTGGGAGGCCAAGGCGGGCGGAACACCTaGGGTAAAGGGTTCGCGACCAGCCTGGCCAACATG +
Preference number: 6 (lower is better)
Translates to: LSPVGGQGGRNT*GKGFATSLANM
Trigger: CATGTTGGCCAGGCTGGTCGCGAACCCTTTACCTCAGGTGTTCCGCCCGCCTTGGCCTCCCACAGGGCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423252.5
ENST00000488074.1
CDS TCA 72 bp GCTTTTGGTCACCTGCTGCTGCGGCGGGTCCTGCCCTaGGGTTCCGGAGCGCTTGGTGGCGTTTTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: AFGHLLLRRVLP*GSGALGGVFPD
Trigger: GTCAGGGAAAACGCCACCAAGCGCTCCGGAACCTCAGGGCAGGACCCGCCGCAGCAGCAGGTGACCAAAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423252.5
CDS GCA 72 bp GGGTCCGAGGAGGCCACGGCGATCAGCTGTGCACCCTaGAGCACCTGGCCACTGCTGGCTTTGAAGACGGAT +
Preference number: 6 (lower is better)
Translates to: GSEEATAISCAP*STWPLLALKTD
Trigger: ATCCGTCTTCAAAGCCAGCAGTGGCCAGGTGCTGCAGGGTGCACAGCTGATCGCCGTGGCCTCCTCGGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000393208.6
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp TTCGGCCGTCTGTGCCCCGGCCGTGTGGTCACTCACTaGCGCCAGCTGCACGTACTGAACCTGGATGTCGCT +
Preference number: 6 (lower is better)
Translates to: FGRLCPGRVVTH*RQLHVLNLDVA
Trigger: AGCGACATCCAGGTTCAGTACGTGCAGCTGGCGCCAGTGAGTGACCACACGGCCGGGGCACAGACGGCCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000479780.6
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp CTCCTGGTGCCATGGGCACCGCTCACTGAATCTGGATaGCCCCGTGCTCGAGCTGCATCTCCGGCTGTAGCG +
Preference number: 6 (lower is better)
Translates to: LLVPWAPLTESG*PRARAASPAVA
Trigger: CGCTACAGCCGGAGATGCAGCTCGAGCACGGGGCCATCCAGATTCAGTGAGCGGTGCCCATGGCACCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000466847.5
ENST00000481948.1
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp GCTGGCCCTCCCGACCTTGTACCGCCTCCCAGAGTATaGAATGAGAATGGGGGACAGGCGAGGCCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AGPPDLVPPPRV*NENGGQARPLG
Trigger: ACCCAGGGGCCTCGCCTGTCCCCCATTCTCATTCCATACTCTGGGAGGCGGTACAAGGTCGGGAGGGCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS GCA 72 bp CCTGAGAGGGGGCTTCTGGGACAGCACTTCATCCTCTaGACGGGGGTCAGGATGGAGGGTGGCGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: PERGLLGQHFIL*TGVRMEGGGEC
Trigger: ACACTCTCCGCCACCCTCCATCCTGACCCCCGTGCAGAGGATGAAGTGCTGTCCCAGAAGCCCCCTCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS TCA 72 bp TTCAGGGTGATGAGCGTGACGTTGCTCCCGATGCTCTaGCTGCCCGCCTGCCCACAGCTGGACACAGAGTCG +
Preference number: 6 (lower is better)
Translates to: FRVMSVTLLPML*LPACPQLDTES
Trigger: CGACTCTGTGTCCAGCTGTGGGCAGGCGGGCAGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000439677.5
ENST00000479780.6
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS GCA 72 bp AGCCCACCACGTGCAGCCAGACTAAACCCAAGGACATaGCGAGGCCCTTCCACAAACAGCCCCGGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: SPPRAARLNPRT*RGPSTNSPGSR
Trigger: TCTGGACCCGGGGCTGTTTGTGGAAGGGCCTCGGCATGTCCTTGGGTTTAGTCTGGCTGCACGTGGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS CCA 72 bp CTGAGGGCACTTGACATGAGCCACGGGGTCTTCACTTaGGGTTGCACCCCACTACGGGAGGGCCAGGAGATG +
Preference number: 6 (lower is better)
Translates to: LRALDMSHGVFT*GCTPLREGQEM
Trigger: CATCTCCTGGCCCTCCCGTAGTGGGGTGCAACCCCAAGTGAAGACCCCGTGGCTCATGTCAAGTGCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS TCA 72 bp ATCCCACACCTCCACACAGAACCGCACTCTGTGCACTaGGAGTCTCACCGGTGGCCCTGGGAAGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: IPHLHTEPHSVH*ESHRWPWEEEQ
Trigger: CTGCTCCTCTTCCCAGGGCCACCGGTGAGACTCTCAGTGCACAGAGTGCGGTTCTGTGTGGAGGTGTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS TCA 72 bp CAGGCGAGCCCACCGGGACGTGCAGAGGCGGAAACCTaGGCTTGTCTACGACTACAACCAAAGCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: QASPPGRAEAET*ACLRLQPKQAE
Trigger: CTCAGCCTGCTTTGGTTGTAGTCGTAGACAAGCTCAGGTTTCCGCCTCTGCACGTCCCGGTGGGCTCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS GCA 72 bp CAGACAAAGGGAGTCCCAGGCGAGCCCACCGGGACGTaGAGAGGCGGAAACCTGAGCTTGTCTACGACTACA +
Preference number: 6 (lower is better)
Translates to: QTKGVPGEPTGT*RGGNLSLSTTT
Trigger: TGTAGTCGTAGACAAGCTCAGGTTTCCGCCTCTGCACGTCCCGGTGGGCTCGCCTGGGACTCCCTTTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCTGCTGCTGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTCCCGG
Trigger: CCCGCCGCAGCAGCAGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423252.5
CDS CAA 90 bp GGCTGGCTTTTGGTCACCGTGTGGGCTGCGGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAATGGCGTCCGTCCTCGCGAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: GWLLVTVWAAEFSWC*SGRCDNGVRPRERS
Trigger: GCTTCTCTCGCGAGGACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGTGACCAAAAGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286122.11
ENST00000393208.6
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000479780.6
ENST00000682872.1
CDS TCA 72 bp AACAGGGCAATTACCTGTTCCACATCAACAACTGTGTaGCCCGGGCCCTCCCCGGTCAGGGTGCAAGCTCGC +
Preference number: 6 (lower is better)
Translates to: NRAITCSTSTTV*PGPSPVRVQAR
Trigger: GCGAGCTTGCACCCTGACCGGGGAGGGCCCGGGTCACACAGTTGTTGATGTGGAACAGGTAATTGCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS GCA 72 bp ATGATTCTCCAAAACAACTGCTGCTGCGGCGGGTCCTaGCCTGAGGTTCCGGAGCGCTTGGTGGCGTTTTCC +
Preference number: 6 (lower is better)
Translates to: MILQNNCCCGGS*PEVPERLVAFS
Trigger: GGAAAACGCCACCAAGCGCTCCGGAACCTCAGGGCAGGACCCGCCGCAGCAGCAGTTGTTTTGGAGAATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488074.1
CDS CAA 72 bp TTGGTCACCGTGTGGGCTGCGGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAATGGCGTCCGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: LVTVWAAEFSWC*SGRCDNGVRPR
Trigger: GCGAGGACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGTGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000286122.11
ENST00000393208.6
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000479780.6
ENST00000682872.1
CDS CAA 72 bp TCTGCATCCGTGTGGGCTGCGGAATTCTCGTGGTGTTaGTCGGGGAGATGCGATAATGGCGTCCGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: SASVWAAEFSWC*SGRCDNGVRPR
Trigger: GCGAGGACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS CAA 72 bp CGAGGCCACAGGGCTGGAGAGAGGCACAAGCTGAGTTaGCAGTCCAGAGCGCCTTGCTTAGAGTGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: RGHRAGERHKLS*QSRAPCLECGV
Trigger: GACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTCTCCAGCCCTGTGGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 90 bp CAGGGCTGGAGAGAGGCACAAGCTGAGTTTGCAGTCCAGAGCGCCTaGCTTAGAGTGTGGAGTCCACTCACATGGAGGGAAAGGGTGCGT +
Preference number: 6 (lower is better)
Translates to: QGWREAQAEFAVQSA*LRVWSPLTWRERVR
Trigger: ACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTCTCCAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS TCA 72 bp CCTGGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCGTGTTCCGACATCATC +
Preference number: 6 (lower is better)
Translates to: PGWSGLRSSTAI*TTSARSCSDII
Trigger: GATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000485772.5
ENST00000626016.2
CDS GCA 72 bp CCTGGTTCAAAACAGGGTATTCTGGAGCCCACCACGTaGAGCCAGACTAAACCCAAGGACATGCCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PGSKQGILEPTT*SQTKPKDMPRP
Trigger: GGGCCTCGGCATGTCCTTGGGTTTAGTCTGGCTGCACGTGGTGGGCTCCAGAATACCCTGTTTTGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS GCA 72 bp GAGCTTGCCTATGATTACAACCAAAGCAGGCGGCTCTaGAGGCTGGGAAGGCCACGTACCAATCACTCGCCC +
Preference number: 6 (lower is better)
Translates to: ELAYDYNQSRRL*RLGRPRTNHSP
Trigger: GGGCGAGTGATTGGTACGTGGCCTTCCCAGCCTGCAGAGCCGCCTGCTTTGGTTGTAATCATAGGCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 72 bp CGGTCATCACACAAGGCTGTCCCACAGCTCTGTACCTaGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTG +
Preference number: 6 (lower is better)
Translates to: RSSHKAVPQLCT*VVRAQVFHCNL
Trigger: CAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGGGACAGCCTTGTGTGATGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454563.5
CDS CCA 72 bp TGGGACAGCACTTCATCCTCTGCACGGGGGTCAGGATaGAGGGTGGCGGAGAGTGTTTCTCTACTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: WDSTSSSARGSG*RVAESVSLLPE
Trigger: CTCAGGAAGTAGAGAAACACTCTCCGCCACCCTCCATCCTGACCCCCGTGCAGAGGATGAAGTGCTGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 72 bp GCTGAGTTTGCAGTCCAGAGCGCCTTGCTTAGAGTGTaGAGTCCACTCACATGGAGGGAAAGGGTGCGTGCG +
Preference number: 6 (lower is better)
Translates to: AEFAVQSALLRV*SPLTWRERVRA
Trigger: CGCACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 90 bp ATTGTCCAGCGAGGCCACAGGGCTGGAGAGAGGCACAAGCTGAGTTaGCAGTCCAGAGCGCCTTGCTTAGAGTGTGGAGTCCACTCACAT +
Preference number: 6 (lower is better)
Translates to: IVQRGHRAGERHKLS*QSRAPCLECGVHSH
Trigger: ATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTCTCCAGCCCTGTGGCCTCGCTGGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS TCA 72 bp ACTGGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTaGACCACATCGGCCAGGTCGTGTTCCGACATCATC +
Preference number: 6 (lower is better)
Translates to: TGWSGLRSSTAI*TTSARSCSDII
Trigger: GATGATGTCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000423252.5
ENST00000436274.5
ENST00000436970.5
ENST00000456902.5
ENST00000466197.5
ENST00000479780.6
ENST00000538234.5
ENST00000682872.1
CDS GCA 72 bp CGCATCAGATCCAGTGAGAGAGTGCCATCGAGTCTCTaGTGGATCTGCAACTCCGCCCTCAAGCACCTACAG +
Preference number: 6 (lower is better)
Translates to: RIRSSERVPSSL*WICNSALKHLQ
Trigger: CTGTAGGTGCTTGAGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS GCA 72 bp CATCGCTCTCAAGTCGCATCAGATCCAGTGAGAGAGTaGCATCGAGTCTCTGCTGGATCTGCAACTCCGCCC +
Preference number: 6 (lower is better)
Translates to: HRSQVASDPVRE*HRVSAGSATPP
Trigger: GGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCGACTTGAGAGCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS CCA 72 bp TGGCTTTTGGTCACCGTGTGGGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGCGATAATGGCGTCCGT +
Preference number: 6 (lower is better)
Translates to: WLLVTVWAAEFS*CLSGRCDNGVR
Trigger: ACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGTGACCAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000286122.11
ENST00000393208.6
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000479780.6
ENST00000682872.1
CDS CCA 72 bp CCGGTCAACACGAAAGAGTTCAACTCACAGTGGGGCTaGCTTTTGGTCACCGTGTGGGCTGCGGAATTCTCG +
Preference number: 6 (lower is better)
Translates to: PVNTKEFNSQWG*LLVTVWAAEFS
Trigger: CGAGAATTCCGCAGCCCACACGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393208.6
ENST00000439677.5
ENST00000454563.5
ENST00000459966.5
ENST00000466197.5
ENST00000479780.6
ENST00000485772.5
ENST00000626016.2
ENST00000682872.1
CDS GCA 72 bp CAAAACAACTGGGTGGTCAGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCGGCCAGGTCGTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: QNNWVVRAQVFH*NLNHIGQVVFR
Trigger: TCGGAACACGACCTGGCCGATGTGGTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000423252.5
ENST00000436274.5
ENST00000436970.5
ENST00000456902.5
ENST00000466197.5
ENST00000479780.6
ENST00000538234.5
ENST00000682872.1
CDS GCA 72 bp TCTTCTTGGCCCGGCACCTTCACCACAATGGTGTTCTaGCGACGCCCAGGCACAGCGTTGCTAATGACATTT +
Preference number: 6 (lower is better)
Translates to: SSWPGTFTTMVF*RRPGTALLMTF
Trigger: AAATGTCATTAGCAACGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTGAAGGTGCCGGGCCAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CCA 72 bp CAGGTCGTGTTCCGACATCATCCAGAGCACGGAGAGTaGCCGGTCAACACGAAAGAGTTCAACTCACAGTGG +
Preference number: 6 (lower is better)
Translates to: QVVFRHHPEHGE*PVNTKEFNSQW
Trigger: CCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTCTCCGTGCTCTGGATGATGTCGGAACACGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000286122.11
ENST00000355022.8
ENST00000393207.5
ENST00000393208.6
ENST00000412691.5
ENST00000423252.5
ENST00000436274.5
ENST00000436970.5
ENST00000439677.5
ENST00000454563.5
ENST00000456902.5
ENST00000459966.5
ENST00000466197.5
ENST00000479780.6
ENST00000485772.5
ENST00000538234.5
ENST00000626016.2
ENST00000682872.1
CDS CCA 72 bp CTACTTTCTGCATCCGTGTGGGCTGCGGAATTCTCGTaGTGTTTGTCGGGGAGATGCGATAATGGCGTCCGT +
Preference number: 6 (lower is better)
Translates to: LLSASVWAAEFS*CLSGRCDNGVR
Trigger: ACGGACGCCATTATCGCATCTCCCCGACAAACACCACGAGAATTCCGCAGCCCACACGGATGCAGAAAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS CCA 72 bp ATCAGATCCAGTGAGAGAGTGCCATCGAGTCTCTGCTaGATCTGCAACTCCGCCCTCAAGCACCTACAGAGC +
Preference number: 6 (lower is better)
Translates to: IRSSERVPSSLC*ICNSALKHLQS
Trigger: GCTCTGTAGGTGCTTGAGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS CCA 72 bp CCTATGATTACAACCAAAGCAGGCGGCTCTGCAGGCTaGGAAGGCCACGTACCAATCACTCGCCCCATTCTT +
Preference number: 6 (lower is better)
Translates to: PMITTKAGGSAG*EGHVPITRPIL
Trigger: AAGAATGGGGCGAGTGATTGGTACGTGGCCTTCCCAGCCTGCAGAGCCGCCTGCTTTGGTTGTAATCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS CCA 72 bp CAGAGCGCCTTGCTTAGAGTGTGGAGTCCACTCACATaGAGGGAAAGGGTGCGTGCGATAGCTGACACAGAA +
Preference number: 6 (lower is better)
Translates to: QSALLRVWSPLT*RERVRAIADTE
Trigger: TTCTGTGTCAGCTATCGCACGCACCCTTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 72 bp GGAGGTTCCACTGAGGCTGGTGGCTGGGTTACTTCGTaGCAAAAGTGCCTTACAAACACTCCAAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: GGSTEAGGWVTS*QKCLTNTPRRS
Trigger: GCTCCTCCTTGGAGTGTTTGTAAGGCACTTTTGCCACGAAGTAACCCAGCCACCAGCCTCAGTGGAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 90 bp GGCACAGCGTTGCTAATGACATTTTCCAGGGAATCCGGTGCCCTGTaGCTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGA +
Preference number: 6 (lower is better)
Translates to: GTALLMTFSRESGAL*LKGSSILATMAFCR
Trigger: TCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAGCAACAGGGCACCGGATTCCCTGGAAAATGTCATTAGCAACGCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CAA 90 bp TGGCCGGTCAACACGAAAGAGTTCAACTCACAGTGGGGCTGGCTTTaGGTCACCTGGTTCAAAACAGGGTATTCTGGAGCCCACCACGTG +
Preference number: 6 (lower is better)
Translates to: WPVNTKEFNSQWGWL*VTWFKTGYSGAHHV
Trigger: CACGTGGTGGGCTCCAGAATACCCTGTTTTGAACCAGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS TCA 72 bp TGTCTCCCCATCGCTCTCAAGTCGCATCAGATCCAGTaGGAGAGTGCCATCGAGTCTCTGCTGGATCTGCAA +
Preference number: 6 (lower is better)
Translates to: CLPIALKSHQIQ*ESAIESLLDLQ
Trigger: TTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGATCTGATGCGACTTGAGAGCGATGGGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS GCA 72 bp TCCAGTGAGAGAGTGCCATCGAGTCTCTGCTGGATCTaGAACTCCGCCCTCAAGCACCTACAGAGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSERVPSSLCWI*NSALKHLQSRK
Trigger: TTTTCTGCTCTGTAGGTGCTTGAGGGCGGAGTTGCAGATCCAGCAGAGACTCGATGGCACTCTCTCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481948.1
CDS GCA 72 bp GAGAGGCACAAGCTGAGTTTGCAGTCCAGAGCGCCTTaGTTAGAGTGTGGAGTCCACTCACATGGAGGGAAA +
Preference number: 6 (lower is better)
Translates to: ERHKLSLQSRAP*LECGVHSHGGK
Trigger: TTTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACATCTGTCATCCCAGCA +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTSVIPA
Trigger: TGCTGGGATGACAGATGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCGGCACTTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTGTFFS
Trigger: ACTGAAGAAAGTGCCGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436970.5
ENST00000538234.5
CDS CCA 72 bp CCGGTCAACACGAAAGAGTTCAACTCACAGTGGGGCTaGCTTTTGGTCACCCGTGATCAGATCCATGCAGAG +
Preference number: 6 (lower is better)
Translates to: PVNTKEFNSQWG*LLVTRDQIHAE
Trigger: CTCTGCATGGATCTGATCACGGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436274.5
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCCGTGATCAGATCCAT +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTRDQIH
Trigger: ATGGATCTGATCACGGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436274.5
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCTGGTTCAAAACAGGG +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTWFKTG
Trigger: CCCTGTTTTGAACCAGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456902.5
CDS CAA 72 bp AGAGAGGCACAAGCTGAGTTTGCAGTCCAGAGCGCCTaGCTTAGAGTGTGGAGTCCACTCACATGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: REAQAEFAVQSA*LRVWSPLTWRE
Trigger: TTCCCTCCATGTGAGTGGACTCCACACTCTAAGCAAGGCGCTCTGGACTGCAAACTCAGCTTGTGCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 90 bp CGGAAACCTGAGCTTGTCTACGACTACAACCAAAGCAGGCTGAGCTaGCCTATGATTACAACCAAAGCAGGCGGCTCTGCAGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: RKPELVYDYNQSRLS*PMITTKAGGSAGWE
Trigger: TTCCCAGCCTGCAGAGCCGCCTGCTTTGGTTGTAATCATAGGCAAGCTCAGCCTGCTTTGGTTGTAGTCGTAGACAAGCTCAGGTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526460.1
CDS GCA 72 bp ACTGAGGCTGGTGGCTGGGTTACTTCGTGGCAAAAGTaGCTTACAAACACTCCAAGGAGGAGCCTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: TEAGGWVTSWQK*LTNTPRRSLGK
Trigger: TTTGCCAAGGCTCCTCCTTGGAGTGTTTGTAAGGCACTTTTGCCACGAAGTAACCCAGCCACCAGCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 72 bp GCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTaGGGGACGACGCATCGCACTTTGTTGCACGTCTGG +
Preference number: 6 (lower is better)
Translates to: AFCRSLLSITVV*GTTHRTLLHVW
Trigger: CCAGACGTGCAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CCA 72 bp CCGGTCAACACGAAAGAGTTCAACTCACAGTGGGGCTaGCTTTTGGTCACATCTGTCATCCCAGCACTTTGG +
Preference number: 6 (lower is better)
Translates to: PVNTKEFNSQWG*LLVTSVIPALW
Trigger: CCAAAGTGCTGGGATGACAGATGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393207.5
CDS CAA 72 bp AGTGGGGACAAAACATGTTCTAGGGACGCACGCCTTTaGTCTCCACCTCCACCTCAATCACGGCTGCATTCA +
Preference number: 6 (lower is better)
Translates to: SGDKTCSRDARL*SPPPPQSRLHS
Trigger: TGAATGCAGCCGTGATTGAGGTGGAGGTGGAGACAAAAGGCGTGCGTCCCTAGAACATGTTTTGTCCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 90 bp CTCAAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTTG +
Preference number: 6 (lower is better)
Translates to: LKGSSILATMAFCRS*LSITVVWGTTHRTL
Trigger: CAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CAA 90 bp CCCTCCGGCAGTGGGGACAAAACATGTTCTAGGGACGCACGCCTTTaGTCTCCACCTCCACCTCAATCACGGCTGCATTCAAATATTAAT +
Preference number: 6 (lower is better)
Translates to: PSGSGDKTCSRDARL*SPPPPQSRLHSNIN
Trigger: ATTAATATTTGAATGCAGCCGTGATTGAGGTGGAGGTGGAGACAAAAGGCGTGCGTCCCTAGAACATGTTTTGTCCCCACTGCCGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CCA 72 bp GAGTGGCCGGTCAACACGAAAGAGTTCAACTCACAGTaGGGCTGGCTTTTGGTCACCATCTCATCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: EWPVNTKEFNSQ*GWLLVTISSVK
Trigger: TTTCACTGATGAGATGGTGACCAAAAGCCAGCCCCACTGTGAGTTGAACTCTTTCGTGTTGACCGGCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412691.5
CDS CCA 72 bp ATGATTCTCCAAAACAATGTCCCACAGCTCTGTACCTaGGTGGTCAGGGCTCAGGTCTTCCACTGCAATCTG +
Preference number: 6 (lower is better)
Translates to: MILQNNVPQLCT*VVRAQVFHCNL
Trigger: CAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGGTACAGAGCTGTGGGACATTGTTTTGGAGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439677.5
ENST00000626016.2
CDS CAA 72 bp TCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGGGGGACGACGCATCGC +
Preference number: 6 (lower is better)
Translates to: SILATMAFCRSL*SITVVWGTTHR
Trigger: GCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CAA 90 bp AAGGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTTGTTG +
Preference number: 6 (lower is better)
Translates to: KGSSILATMAFCRSL*SITVVWGTTHRTLL
Trigger: CAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CAA 72 bp GCACTTTCTGGTCACAAGGGATATCTAAGGTCCGCTTaGTTGTGGAAGGCATCGCACTTTGTTGCACGTCTG +
Preference number: 6 (lower is better)
Translates to: ALSGHKGYLRSA*LWKASHFVARL
Trigger: CAGACGTGCAACAAAGTGCGATGCCTTCCACAACAAAGCGGACCTTAGATATCCCTTGTGACCAGAAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466197.5
CDS TCA 72 bp CCACACTCGCTCCACTTGCTCACAGTTCTTCAGGGATaGTGTATTTCTCCAATAGCAAGACAACCCCTACCA +
Preference number: 6 (lower is better)
Translates to: PHSLHLLTVLQG*CISPIARQPLP
Trigger: TGGTAGGGGTTGTCTTGCTATTGGAGAAATACATCATCCCTGAAGAACTGTGAGCAAGTGGAGCGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS CAA 72 bp TCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTCTGGGGGACGACGCAT +
Preference number: 6 (lower is better)
Translates to: SSILATMAFCRS*LSITVVWGTTH
Trigger: ATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286122.11
ENST00000393207.5
ENST00000538234.5
ENST00000682872.1
CDS CAA 90 bp ATGATTCTCCAAAACAACGAGTTAAAGTCTCCTCCAGAATTAGGCTaGGAGGTTCCACTGAGGCTGGTGGCTGGGTTACTTCGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: MILQNNELKSPPELG*EVPLRLVAGLLRGK
Trigger: TTTGCCACGAAGTAACCCAGCCACCAGCCTCAGTGGAACCTCCAAGCCTAATTCTGGAGGAGACTTTAACTCGTTGTTTTGGAGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS TCA 72 bp CTTGGCAAAATGGCAGCGCTGGGACAGGTGTTGATCTaGAGATGGGACTTGTCCTTTTTCAACATGAAGATC +
Preference number: 6 (lower is better)
Translates to: LGKMAALGQVLI*RWDLSFFNMKI
Trigger: GATCTTCATGTTGAAAAAGGACAAGTCCCATCTTCAGATCAACACCTGTCCCAGCGCTGCCATTTTGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569400.5
CDS CAA 72 bp CGGGAAGTGGACCCACATACAGAATTTTACCGCGTTTaGGTGTTTTCTTCTAGCACTGGATATCTGCGAGCT +
Preference number: 6 (lower is better)
Translates to: REVDPHTEFYRV*VFSSSTGYLRA
Trigger: AGCTCGCAGATATCCAGTGCTAGAAGAAAACACCAAAACGCGGTAAAATTCTGTATGTGGGTCCACTTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612301.1
CDS TCA 72 bp CGCCGGAATATCTGGCTTGAAAACACAAACCTAGGGTaGTGTCGTTCCTGTTGTTTCAAAACATTCCCAAGT +
Preference number: 6 (lower is better)
Translates to: RRNIWLENTNLG*CRSCCFKTFPS
Trigger: ACTTGGGAATGTTTTGAAACAACAGGAACGACATCACCCTAGGTTTGTGTTTTCAAGCCAGATATTCCGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569400.5