Pregenerated sensors for BANF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125888Ensembl transcript IDs: ENST00000246090.6, ENST00000377805.7, ENST00000427254.1, ENST00000467330.1, ENST00000545418.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATTCCAGTGGGTAGAGTCAGGAAGGTTGTCGGGCTGTGGGAATGGTaGATGGGACTTGGTGGCTTGCCTTCCAGGACTTGGCAGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: IPVGRVRKVVGLWEW*MGLGGLPSRTWQEM Trigger: CATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTCTACCCACTGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 90 bp | ATGGGTGAACTGAAGCCTGGAGTCAGGAGGAAGAAGTCCCATGCATaGGGACCTCACAACCATGGGCAAATGTCCAGGCCACAGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: MGELKPGVRRKKSHA*GPHNHGQMSRPQAA Trigger: TGCAGCCTGTGGCCTGGACATTTGCCCATGGTTGTGAGGTCCCCATGCATGGGACTTCTTCCTCCTGACTCCAGGCTTCAGTTCACCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 90 bp | TTACAATGCCCTCTGCCCAAGTCCGCAGGTCCTGAGCACCTGTGCTaGACGGACTTCAATCACCACCAGACTCCATGGTGCAGTGACACA | + |
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Preference number: 5 (lower is better) Translates to: LQCPLPKSAGPEHLC*TDFNHHQTPWCSDT Trigger: TGTGTCACTGCACCATGGAGTCTGGTGGTGATTGAAGTCCGTTCAGCACAGGTGCTCAGGACCTGCGGACTTGGGCAGAGGGCATTGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 90 bp | AGTCAGGAAGGTTGTCGGGCTGTGGGAATGGTGCATGGGACTTGGTaGCTTGCCTTCCAGGACTTGGCAGGAGATGACAACAACAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SQEGCRAVGMVHGTW*LAFQDLAGDDNNSH Trigger: GTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS GCA 90 bp | TGTCAAGCAGAGATAAGCTGTCTCTGCCCTCTCTTGTTCTCTAGCTaGTTACAATGCCCTCTGCCCAAGTCCGCAGGTCCTGAGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: CQAEISCLCPLLFSS*LQCPLPKSAGPEHL Trigger: CAGGTGCTCAGGACCTGCGGACTTGGGCAGAGGGCATTGTAAGCAGCTAGAGAACAAGAGAGGGCAGAGACAGCTTATCTCTGCTTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 90 bp | GCAGCAGTGGAAACTAAGATAGCCCAGGTGCTCCTGATAAGCCAGTaGCAGCTGGCAGTTTGTCTCAGTCACCTTGGATCTGGAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: AAVETKIAQVLLISQ*QLAVCLSHLGSGTA Trigger: TGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGGGCTATCTTAGTTTCCACTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 90 bp | CTGTGGGAATGGTGCATGGGACTTGGTGGCTTGCCTTCCAGGACTTaGCAGGAGATGACAACAACAGTCACTTCTGAAGTGTCTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LWEWCMGLGGLPSRT*QEMTTTVTSEVSWA Trigger: TGCCCAAGACACTTCAGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 90 bp | GGTGCATGGGACTTGGTGGCTTGCCTTCCAGGACTTGGCAGGAGATaGCAACAACAGTCACTTCTGAAGTGTCTTGGGCAACAATGTAGC | + |
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Preference number: 5 (lower is better) Translates to: GAWDLVACLPGLGRR*QQQSLLKCLGQQCS Trigger: GCTACATTGTTGCCCAAGACACTTCAGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS GCA 90 bp | GTAGGCCATAATGCTGGGCCTTGTCAAGCAGAGATAAGCTGTCTCTaGCCTCTCTTGTTCTCTAGCTGCTTACAATGCCCTCTGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VGHNAGPCQAEISCL*PLLFSSCLQCPLPK Trigger: CTTGGGCAGAGGGCATTGTAAGCAGCTAGAGAACAAGAGAGGGCAGAGACAGCTTATCTCTGCTTGACAAGGCCCAGCATTATGGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 90 bp | AGACATCCTTTTCTCCAATGGGTTCGGAGAGGAAGGCTCTCAGCCTaGGAGACATGTTGTCCATCTCCTTTCTACAGAGTCGAGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RHPFLQWVRRGRLSA*ETCCPSPFYRVELL Trigger: GAGGAGCTCGACTCTGTAGAAAGGAGATGGACAACATGTCTCCCAGGCTGAGAGCCTTCCTCTCCGAACCCATTGGAGAAAAGGATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CCA 90 bp | CTCCTGAACAAACATCCAGAAGTGGGCAGACTCTTTAGATTCCAGTaGGTAGAGTCAGGAAGGTTGTCGGGCTGTGGGAATGGTGCATGG | + |
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Preference number: 5 (lower is better) Translates to: LLNKHPEVGRLFRFQ*VESGRLSGCGNGAW Trigger: CCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTCTACCCACTGGAATCTAAAGAGTCTGCCCACTTCTGGATGTTTGTTCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 90 bp | AGACATCCTTTTCTCCAATGGGTTCGGAGAGGAAGGCTCTCAGCCTaGGAGACATGTTGTCCATCTCCTTTGTTCCTCGCAGCATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RHPFLQWVRRGRLSA*ETCCPSPLFLAAFS Trigger: GCTGAATGCTGCGAGGAACAAAGGAGATGGACAACATGTCTCCCAGGCTGAGAGCCTTCCTCTCCGAACCCATTGGAGAAAAGGATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545418.2 |
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| CDS TCA 90 bp | TGGGCCTCACACTCAGTGGCACCAAAACAGCAAATGAGCCACCTCTaGAACTCGGCTTCATTCTTGTGCATCAGAAGGAATTGTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WASHSVAPKQQMSHL*NSASFLCIRRNCPS Trigger: GCTGGGACAATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAGTGTGAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000467330.1 ENST00000545418.2 |
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| CDS TCA 90 bp | GAGAAGTCTGCTGGGCCTCACACTCAGTGGCACCAAAACAGCAAATaGGCCACCTCTGAAACTCGGCTTCATTCTTGTGCATCAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: EKSAGPHTQWHQNSK*ATSETRLHSCASEG Trigger: TCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAGTGTGAGGCCCAGCAGACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000467330.1 ENST00000545418.2 |
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| CDS TCA 90 bp | CTTGCCTTCCAGGACTTGGCAGGAGATGACAACAACAGTCACTTCTaGAGTGTCTTGGGCAACAATGTAGCAGCAGTAAACAGTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LAFQDLAGDDNNSHF*SVLGNNVAAVNSGW Trigger: CCAGCCACTGTTTACTGCTGCTACATTGTTGCCCAAGACACTTCAGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 90 bp | TCTCCTTTCTACAGAGTCGAGCTCCTCGTGTACGCCTTCTTGCTCTaGAGGACGTTTTGTAACATTTCAGAAGACACTGAACTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SPFYRVELLVYAFLL*RTFCNISEDTELSR Trigger: CCGGGAGAGTTCAGTGTCTTCTGAAATGTTACAAAACGTCCTTCAGAGCAAGAAGGCGTACACGAGGAGCTCGACTCTGTAGAAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS GCA 90 bp | GTCCATCTCCTTTCTACAGAGTCGAGCTCCTCGTGTACGCCTTCTTaGTCTGAAGGACGTTTTGTAACATTTCAGAAGACACTGAACTCT | + |
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Preference number: 5 (lower is better) Translates to: VHLLSTESSSSCTPS*SEGRFVTFQKTLNS Trigger: AGAGTTCAGTGTCTTCTGAAATGTTACAAAACGTCCTTCAGAGCAAGAAGGCGTACACGAGGAGCTCGACTCTGTAGAAAGGAGATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CCA 72 bp | GAGTCAGGAAGGTTGTCGGGCTGTGGGAATGGTGCATaGGACTTGGTGGCTTGCCTTCCAGGACTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ESGRLSGCGNGA*DLVACLPGLGR Trigger: CCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS GCA 72 bp | GGTAGAGTCAGGAAGGTTGTCGGGCTGTGGGAATGGTaGATGGGACTTGGTGGCTTGCCTTCCAGGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRVRKVVGLWEW*MGLGGLPSRTW Trigger: CCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 72 bp | GAGGAAGAAGTCCCATGCATGGGGACCTCACAACCATaGGCAAATGTCCAGGCCACAGGCTGCAGCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EEEVPCMGTSQP*ANVQATGCSSG Trigger: TCCACTGCTGCAGCCTGTGGCCTGGACATTTGCCCATGGTTGTGAGGTCCCCATGCATGGGACTTCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 72 bp | GGTTGTCGGGCTGTGGGAATGGTGCATGGGACTTGGTaGCTTGCCTTCCAGGACTTGGCAGGAGATGACAAC | + |
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Preference number: 6 (lower is better) Translates to: GCRAVGMVHGTW*LAFQDLAGDDN Trigger: GTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 72 bp | GTGGGTAGAGTCAGGAAGGTTGTCGGGCTGTGGGAATaGTGCATGGGACTTGGTGGCTTGCCTTCCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: VGRVRKVVGLWE*CMGLGGLPSRT Trigger: AGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTCTACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 72 bp | CTGCTTACAATGCCCTCTGCCCAAGTCCGCAGGTCCTaGGCACCTGTGCTGAACGGACTTCAATCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: LLTMPSAQVRRS*APVLNGLQSPP Trigger: TGGTGGTGATTGAAGTCCGTTCAGCACAGGTGCTCAGGACCTGCGGACTTGGGCAGAGGGCATTGTAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 72 bp | ATTCCAGTGGGTAGAGTCAGGAAGGTTGTCGGGCTGTaGGAATGGTGCATGGGACTTGGTGGCTTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: IPVGRVRKVVGL*EWCMGLGGLPS Trigger: GGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCTGACTCTACCCACTGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CAA 72 bp | CCAGGTGCTCCTGATAAGCCAGTGGCAGCTGGCAGTTaGTCTCAGTCACCTTGGATCTGGAACTGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGAPDKPVAAGS*SQSPWIWNCRP Trigger: TGGCCTGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377805.7 ENST00000427254.1 |
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| CDS CAA 72 bp | GTCGGGCTGTGGGAATGGTGCATGGGACTTGGTGGCTaGCCTTCCAGGACTTGGCAGGAGATGACAACAACA | + |
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Preference number: 6 (lower is better) Translates to: VGLWEWCMGLGG*PSRTWQEMTTT Trigger: TGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CAA 90 bp | TGTCCATCTCCAGGTGCTCCTGATAAGCCAGTGGCAGCTGGCAGTTaGTCTCAGTCACCTTGGATCTGGAACTGCAGGCCAGAGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: CPSPGAPDKPVAAGS*SQSPWIWNCRPEVQ Trigger: CTGAACCTCTGGCCTGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGGAGATGGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377805.7 |
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| CDS CAA 72 bp | TCAGGTGCTCCTGATAAGCCAGTGGCAGCTGGCAGTTaGTCTCAGTCACCTTGGATCTGGAACTGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGAPDKPVAAGS*SQSPWIWNCRP Trigger: TGGCCTGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CAA 90 bp | TCAGCAGATTCAGGTGCTCCTGATAAGCCAGTGGCAGCTGGCAGTTaGTCTCAGTCACCTTGGATCTGGAACTGCAGGCCAGAGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SADSGAPDKPVAAGS*SQSPWIWNCRPEVQ Trigger: CTGAACCTCTGGCCTGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGAATCTGCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CAA 90 bp | AGGAAGGTTGTCGGGCTGTGGGAATGGTGCATGGGACTTGGTGGCTaGCCTTCCAGGACTTGGCAGGAGATGACAACAACAGTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: RKVVGLWEWCMGLGG*PSRTWQEMTTTVTS Trigger: AGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCATTCCCACAGCCCGACAACCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS GCA 72 bp | GAGATAAGCTGTCTCTGCCCTCTCTTGTTCTCTAGCTaGTTACAATGCCCTCTGCCCAAGTCCGCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EISCLCPLLFSS*LQCPLPKSAGP Trigger: AGGACCTGCGGACTTGGGCAGAGGGCATTGTAAGCAGCTAGAGAACAAGAGAGGGCAGAGACAGCTTATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 72 bp | AAGCCAGTGGCAGCTGGCAGTTTGTCTCAGTCACCTTaGATCTGGAACTGCAGGCCAGAGGTTCAGCTTATG | + |
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Preference number: 6 (lower is better) Translates to: KPVAAGSLSQSP*IWNCRPEVQLM Trigger: CATAAGCTGAACCTCTGGCCTGCAGTTCCAGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000427254.1 |
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| CDS CCA 72 bp | TTTCTCCAATGGGTTCGGAGAGGAAGGCTCTCAGCCTaGGAGACATGTTGTCCATCTCCAGGTGCTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: FLQWVRRGRLSA*ETCCPSPGAPD Trigger: ATCAGGAGCACCTGGAGATGGACAACATGTCTCCCAGGCTGAGAGCCTTCCTCTCCGAACCCATTGGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377805.7 |
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| CDS CAA 90 bp | AATGCTGGGCCTTGTCAAGCAGAGATAAGCTGTCTCTGCCCTCTCTaGTTCTCTAGCTGCTTACAATGCCCTCTGCCCAAGTCCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NAGPCQAEISCLCPL*FSSCLQCPLPKSAG Trigger: ACCTGCGGACTTGGGCAGAGGGCATTGTAAGCAGCTAGAGAACAAGAGAGGGCAGAGACAGCTTATCTCTGCTTGACAAGGCCCAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS TCA 72 bp | GCTGGGCCTCACACTCAGTGGCACCAAAACAGCAAATaGGCCACCTCTGAAACTCGGCTTCATTCTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: AGPHTQWHQNSK*ATSETRLHSCA Trigger: TGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAGTGTGAGGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000467330.1 ENST00000545418.2 |
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| CDS CCA 72 bp | TGGTGCATGGGACTTGGTGGCTTGCCTTCCAGGACTTaGCAGGAGATGACAACAACAGTCACTTCTGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: WCMGLGGLPSRT*QEMTTTVTSEV Trigger: CACTTCAGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTGGAAGGCAAGCCACCAAGTCCCATGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 72 bp | TTTCTCCAATGGGTTCGGAGAGGAAGGCTCTCAGCCTaGGAGACATGTTGTCCATCTCCTTTGTTCCTCGCA | + |
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Preference number: 6 (lower is better) Translates to: FLQWVRRGRLSA*ETCCPSPLFLA Trigger: TGCGAGGAACAAAGGAGATGGACAACATGTCTCCCAGGCTGAGAGCCTTCCTCTCCGAACCCATTGGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545418.2 |
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| CDS CCA 72 bp | ATGTGTCAGCAGATTCAGGTGCTCCTGATAAGCCAGTaGCAGCTGGCAGTTTGTCTCAGTCACCTTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: MCQQIQVLLISQ*QLAVCLSHLGS Trigger: AGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGAATCTGCTGACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CCA 72 bp | TTTCTCCAATGGGTTCGGAGAGGAAGGCTCTCAGCCTaGGAGACATGTTGTCCATCTCCTTTCTACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLQWVRRGRLSA*ETCCPSPFYRV Trigger: GACTCTGTAGAAAGGAGATGGACAACATGTCTCCCAGGCTGAGAGCCTTCCTCTCCGAACCCATTGGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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| CDS CCA 72 bp | GAAACTAAGATAGCCCAGGTGCTCCTGATAAGCCAGTaGCAGCTGGCAGTTTGTCTCAGTCACCTTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: ETKIAQVLLISQ*QLAVCLSHLGS Trigger: AGATCCAAGGTGACTGAGACAAACTGCCAGCTGCCACTGGCTTATCAGGAGCACCTGGGCTATCTTAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS GCA 72 bp | AATGCTGGGCCTTGTCAAGCAGAGATAAGCTGTCTCTaGCCTCTCTTGTTCTCTAGCTGCTTACAATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NAGPCQAEISCL*PLLFSSCLQCP Trigger: AGGGCATTGTAAGCAGCTAGAGAACAAGAGAGGGCAGAGACAGCTTATCTCTGCTTGACAAGGCCCAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467330.1 |
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| CDS CCA 72 bp | AAACATCCAGAAGTGGGCAGACTCTTTAGATTCCAGTaGGTAGAGTCAGGAAGGTTGTCGGGCTGTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: KHPEVGRLFRFQ*VESGRLSGCGN Trigger: ATTCCCACAGCCCGACAACCTTCCTGACTCTACCCACTGGAATCTAAAGAGTCTGCCCACTTCTGGATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS CCA 72 bp | TTGATACCTTTGGTGACCAAATTGATCGCGAGCTCATaGCTGATGCCATCCACCCAGCAGACATCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LIPLVTKLIASS*LMPSTQQTSFS Trigger: AGAAAAGGATGTCTGCTGGGTGGATGGCATCAGCCATGAGCTCGCGATCAATTTGGTCACCAAAGGTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000427254.1 ENST00000545418.2 |
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| CDS CCA 72 bp | GTCTTGGGCAACAATGTAGCAGCAGTAAACAGTGGCTaGGAAGATAAGCTTGAGGCAGTGCCCTTGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLGNNVAAVNSG*EDKLEAVPLVF Trigger: AAAAACCAAGGGCACTGCCTCAAGCTTATCTTCCCAGCCACTGTTTACTGCTGCTACATTGTTGCCCAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 72 bp | CACTCAGTGGCACCAAAACAGCAAATGAGCCACCTCTaGAACTCGGCTTCATTCTTGTGCATCAGAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: HSVAPKQQMSHL*NSASFLCIRRN Trigger: ATTCCTTCTGATGCACAAGAATGAAGCCGAGTTTCAGAGGTGGCTCATTTGCTGTTTTGGTGCCACTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000246090.6 ENST00000377805.7 ENST00000467330.1 ENST00000545418.2 |
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| CDS TCA 72 bp | CAGGACTTGGCAGGAGATGACAACAACAGTCACTTCTaGAGTGTCTTGGGCAACAATGTAGCAGCAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: QDLAGDDNNSHF*SVLGNNVAAVN Trigger: GTTTACTGCTGCTACATTGTTGCCCAAGACACTTCAGAAGTGACTGTTGTTGTCATCTCCTGCCAAGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427254.1 |
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| CDS TCA 72 bp | TACAGAGTCGAGCTCCTCGTGTACGCCTTCTTGCTCTaGAGGACGTTTTGTAACATTTCAGAAGACACTGAA | + |
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Preference number: 6 (lower is better) Translates to: YRVELLVYAFLL*RTFCNISEDTE Trigger: TTCAGTGTCTTCTGAAATGTTACAAAACGTCCTTCAGAGCAAGAAGGCGTACACGAGGAGCTCGACTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246090.6 |
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