Pregenerated sensors for BAMBI (Homo sapiens)
Ensembl gene IDs: ENSG00000095739Ensembl transcript IDs: ENST00000375533.6, ENST00000497699.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGGGCACATTTTTGTTTATTTAGGTACTCAATTCCAGCTCCCTTaGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: IGHIFVYLGTQFQLP*MQITLVTVCTKSSL Trigger: AAGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAAATAAACAAAAATGTGCCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| 3UTR CAA 90 bp | CATAGGGCACATTTTTGTTTATTTAGGTACTCAATTCCAGCTCCCTaGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HRAHFCLFRYSIPAP*DANNPGDSVYKVFS Trigger: AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAAATAAACAAAAATGTGCCCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGGGAGTGGCGATCCATTaGCGCCCCGCACGGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKGVAIH*RPARPR Trigger: CCGCGGCCGTGCGGGGCGTCAATGGATCGCCACTCC...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCGCCCCGGGTCGGGAGTaGGCTCCCGGCCTTCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSAPGRE*APGLQS Trigger: GGACTGAAGGCCGGGAGCCCACTCCCGACCCGGGGC...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCCCCGTCGGCGGCCACTaGCTCCCTTGCCCCGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSPVGGH*LPCPAR Trigger: TCGAGCGGGGCAAGGGAGCCAGTGGCCGCCGACGGG...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCTGGGTTTCGGGCCGCTaGCGGAGCATGGAGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFWVSGR*RSMERG Trigger: GCCGCGCTCCATGCTCCGGCAGCGGCCCGAAACCCA...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCCCTGTTTCCTTGTCCTaGGGCCTCACCCCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSPVSLS*GLTPGR Trigger: CCTCCCAGGGGTGAGGCCTCAGGACAAGGAAACAGG...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCCCAGCTGCAGCCAGATaGAGATGTAGCTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFPAAAR*RCSWSG Trigger: GCCACTCCAGCTACATCTTCATCTGGCTGCAGCTGG...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | TGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTAGTTGAATTTCACCTTTGGTaGGCAGCACGGCCATGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CSCPAELKRPSSCSVSVVEFHLW*AARPWR Trigger: GCGCCATGGCCGTGCTGCTCACCAAAGGTGAAATTC...AACTACACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | CCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTCCAGGCAGCCATGGGTaGGTGGGGAATTTGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PAPLDANNPGDSVYKVFSPGSHG*VGNLSS Trigger: AGAACTCAAATTCCCCACTCACCCATGGCTGCCTGG...AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCAGTTCTCGTGCCCACTaGCCGGCACCATGCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSSSRAH*PAPCIP Trigger: TGGAATGCATGGTGCCGGTCAGTGGGCACGAGAACT...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTAGACAGCAGTTCTCGTaGCCACTGACCGGCACCATG | + |
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Preference number: 4 (lower is better) Translates to: LGTQFQLPWMQITLVTVCRQQFS*PLTGTM Trigger: CATGGTGCCGGTCAGTGGGCACGAGAACTGCTGTCT...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTGAGTCCAGGCAGCCATaGGTGAGTGGGGAATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PAPLDANNPGDSVYKVFSESRQP*VSGEFE Trigger: CTCAAATTCCCCACTCACCCATGGCTGCCTGGACTC...AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCGATGTCTGTCGTGCTTaGAAGAGAGTCCAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFDVCRA*KRVQAA Trigger: GGCTGCCTGGACTCTCTTGCAAGCACGACAGACATC...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGGGCAGATGTCTGTCGTaGTTGCAAGAGAGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKGRCLS*LQESPG Trigger: GCCTGGACTCTCTTGCAAGCACGACAGACATCTGCC...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTAGTTATGTGGGTATGGTGGTaGCAGAGTGGTTTCGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CSCPAELKRPSSCSVSVVMWVWW*QSGFGP Trigger: AGGCCCGAAACCACTCTGGCACCACCATACCCACAT...AACTACACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCCACGGCAATGACCGCTaGCCGGAACCACAACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFHGNDR*PEPQLF Trigger: AAAGAGTTGTGGTTCCGGGCAGCGGTCATTGCCGTG...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAATTCCAGCTTCCCGTaGCCACTGTACATGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFNSSFP*PLYMPQ Trigger: CTGGGGCATGTACAGTGGGCACGGGAAGCTGGAATT...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCGGTTTCGGGCCTGTTTaGCTTGGCAGATGTCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFGFGPV*LGRCLS Trigger: CGACAGACATCTGCCAAGCCAAACAGGCCCGAAACC...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTATGGTGGTGCCAGAGTaGTTTCGGGCCTGTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGTQFQLPWMQITLVTVCMVVPE*FRACLA Trigger: AGCCAAACAGGCCCGAAACCACTCTGGCACCACCAT...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCGTGCCCACTGTACATaGCCCAGTGAACAAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: IKCSCPAELKRPSSCSVSRAHCT*PSEQAR Trigger: TCTCGCTTGTTCACTGGGGCATGTACAGTGGGCACG...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | TGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTAGTTAGCATCTGTTGCCGCTaGTCCTGCAGCCTCTTATTT | + |
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Preference number: 4 (lower is better) Translates to: CSCPAELKRPSSCSVSVVSICCR*SCSLLF Trigger: AAATAAGAGGCTGCAGGATCAGCGGCAACAGATGCT...AACTACACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTCTGTACATGCCCCAGTaGACAAGCGAGAGGATCTTA | + |
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Preference number: 4 (lower is better) Translates to: LGTQFQLPWMQITLVTVCLYMPQ*TSERIL Trigger: TAAGATCCTCTCGCTTGTTCACTGGGGCATGTACAG...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCGACAGCATTCCAATGTaGGTATGGTGGTGCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFDSIPM*VWWCQS Trigger: ACTCTGGCACCACCATACCCACATTGGAATGCTGTC...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTGGTGAGTGGGGAATTTaGGTTCTGAGGATCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGTQFQLPWMQITLVTVCGEWGI*VLRIKK Trigger: CTTCTTGATCCTCAGAACTCAAATTCCCCACTCACC...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | CCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTGGATCTTATCGTTGCTaGGGTCTGCTTGTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: PAPLDANNPGDSVYKVFSGSYRC*GLLVSF Trigger: AAATGAGACAAGCAGACCTCAGCAACGATAAGATCC...AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCATTCCAATGTGGGTATaGTGGTGCCAGAGTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSIPMWV*WCQSGF Trigger: GAAACCACTCTGGCACCACCATACCCACATTGGAAT...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCAACCTGCCCCTTTTTaGAATGGTGTCCGTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: IKCSCPAELKRPSSCSVSQPAPF*NGVRES Trigger: GCTTTCACGGACACCATTCCAAAAAGGGGCAGGTTG...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCGAAGAAGTCAGCTCCTaGACCTTGGTGATAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSEEVSS*TLVIRF Trigger: AAACCTTATCACCAAGGTGCAGGAGCTGACTTCTTC...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTTACACATATAACCAGTaGCTACACAGTGGGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LGTQFQLPWMQITLVTVCYTYNQ*LHSGQH Trigger: ATGCTGCCCACTGTGTAGCCACTGGTTATATGTGTA...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCAATTCCAGCTCCCTTaGATGCAAATAACCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IKCSCPAELKRPSSCSVSQFQLP*MQITLV Trigger: CACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTG...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR TCA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGGGGAATTTGAGTTCTaGGGATCAAGAAGTCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: IKCSCPAELKRPSSCSVSGEFEF*GSRSLE Trigger: CTCTAGACTTCTTGATCCTCAGAACTCAAATTCCCC...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCTAACTTTGCAACCTaGCCCTTTTTGGAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKSNFAT*PFLEWC Trigger: ACACCATTCCAAAAAGGGGCAGGTTGCAAAGTTAGA...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTTGTCTTCAGATAAAGTaGTCCTGTCCAGCAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: IKCSCPAELKRPSSCSVSCLQIK*SCPAEL Trigger: GAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACA...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR GCA 90 bp | GTTTGTCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCATCGTTGCTGAGGTCTaGTTGTCTCATTTTATCACA | + |
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Preference number: 4 (lower is better) Translates to: VCLQIKCSCPAELKRPSSIVAEV*LSHFIT Trigger: TGTGATAAAATGAGACAAGCAGACCTCAGCAACGAT...GCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS CCA 90 bp | GGCATGGGCCCTGCCCGGAGCGGCGGGCGCCGTCAGCGGCGGGGCTaGGTTTCGGGCCGCTGCCGGAGCATGGAGCGCGGCTACAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GMGPARSGGRRQRRG*VSGRCRSMERGYRA Trigger: CGCCCTGTAGCCGCGCTCCATGCTCCGGCAGCGGCCCGAAACCCAGCCCCGCCGCTGACGGCGCCCGCCGCTCCGGGCAGGGCCCATGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CCA 90 bp | AATGTGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTTGGCTTaGCAGATGTCTGTCGTGCTTGCAAGAGAGTCCAGGCAGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: NVGMVVPEWFRACLA*QMSVVLARESRQPW Trigger: CCATGGCTGCCTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS-3UTR CAA 90 bp | TCTTCAGATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCTGGAGTGGCGATCCATaGACGCCCCGCACGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SSDKVLLSSRTQKAFKLFWSGDP*TPRTAA Trigger: CGCGGCCGTGCGGGGCGTCAATGGATCGCCACTCCA...GAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS CCA 90 bp | ATTCCAATGTGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTTaGCTTGGCAGATGTCTGTCGTGCTTGCAAGAGAGTCCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IPMWVWWCQSGFGPV*LGRCLSCLQESPGS Trigger: GCTGCCTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS-3UTR CAA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCGGCCACTGGCTCCCTaGCCCCGCTCGACTCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: IKCSCPAELKRPSSCSVSRPLAP*PRSTLG Trigger: CCCTAGAGTCGAGCGGGGCAAGGGAGCCAGTGGCCG...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS CCA 90 bp | GCATTCTGGTTAGAAACGGCTTCCACCTACCTGAGGCCTCACCCCTaGGAGGAGAGAGAACATCGTGCAGCCCTCTGTAATTGCACATGT | + |
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Preference number: 5 (lower is better) Translates to: AFWLETASTYLRPHP*EEREHRAALCNCTC Trigger: ACATGTGCAATTACAGAGGGCTGCACGATGTTCTCTCTCCTCCCAGGGGTGAGGCCTCAGGTAGGTGGAAGCCGTTTCTAACCAGAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497699.1 |
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| CDS TCA 90 bp | CGTCATACGAATTCCAGCTTCCCGTGCCCACTGTACATGCCCCAGTaGACAAGCGAGAGGATCTTATCGTTGCTGAGGTCTGCTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RHTNSSFPCPLYMPQ*TSERILSLLRSACL Trigger: GAGACAAGCAGACCTCAGCAACGATAAGATCCTCTCGCTTGTTCACTGGGGCATGTACAGTGGGCACGGGAAGCTGGAATTCGTATGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 90 bp | CCTCACCCCTGGGAGGAGAGAGAACATCGTGCAGCCCTCTGTAATTaGACATGTCTTCATGACAGCATTCCAATGTGGGTATGGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PHPWEEREHRAALCN*TCLHDSIPMWVWWC Trigger: GCACCACCATACCCACATTGGAATGCTGTCATGAAGACATGTGCAATTACAGAGGGCTGCACGATGTTCTCTCTCCTCCCAGGGGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS TCA 90 bp | GCAAGAGAGTCCAGGCAGCCATGGGTGAGTGGGGAATTTGAGTTCTaGGGATCAAGAAGTCTAGAGAAGCAGGCGCTGAGCTCAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: ARESRQPWVSGEFEF*GSRSLEKQALSSDL Trigger: TAAATCTGAGCTCAGCGCCTGCTTCTCTAGACTTCTTGATCCTCAGAACTCAAATTCCCCACTCACCCATGGCTGCCTGGACTCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 90 bp | AATTGCACATGTCTTCATGACAGCATTCCAATGTGGGTATGGTGGTaGCAGAGTGGTTTCGGGCCTGTTTGGCTTGGCAGATGTCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: NCTCLHDSIPMWVWW*QSGFGPVWLGRCLS Trigger: CGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAATGCTGTCATGAAGACATGTGCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CCA 90 bp | CCGGCACCATGCATTCCAAGTCTAACTTTGCAACCTGCCCCTTTTTaGAATGGTGTCCGTGAAAGCTGTAGTGCAAACGGGAGAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: PAPCIPSLTLQPAPF*NGVRESCSANGRAS Trigger: AGATGCTCTCCCGTTTGCACTACAGCTTTCACGGACACCATTCCAAAAAGGGGCAGGTTGCAAAGTTAGACTTGGAATGCATGGTGCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCGGGCCTGTTTGGCTaGGCAGATGTCTGTCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKSGLFG*ADVCRA Trigger: AGCACGACAGACATCTGCCAAGCCAAACAGGCCCGA...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTACGGGAGAGCATCTGTaGCCGCTGATCCTGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: IKCSCPAELKRPSSCSVSTGEHL*PLILQP Trigger: AGGCTGCAGGATCAGCGGCAACAGATGCTCTCCCGT...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS CCA 90 bp | TGTAATTGCACATGTCTTCATGACAGCATTCCAATGTGGGTATGGTaGTGCCAGAGTGGTTTCGGGCCTGTTTGGCTTGGCAGATGTCTG | + |
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Preference number: 5 (lower is better) Translates to: CNCTCLHDSIPMWVW*CQSGFGPVWLGRCL Trigger: CAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAATGCTGTCATGAAGACATGTGCAATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CCA 90 bp | CTCTGTAATTGCACATGTCTTCATGACAGCATTCCAATGTGGGTATaGTGGTGCCAGAGTGGTTTCGGGCCTGTTTGGCTTGGCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: LCNCTCLHDSIPMWV*WCQSGFGPVWLGRC Trigger: ACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAATGCTGTCATGAAGACATGTGCAATTACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS-3UTR CAA 90 bp | TTAGGTACTCAATTCCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTAGATGTCTGTCGTGCTaGCAAGAGAGTCCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LGTQFQLPWMQITLVTVCRCLSC*QESPGS Trigger: GCTGCCTGGACTCTCTTGCAAGCACGACAGACATCT...ACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGGTTTCGGGCCTGTTaGGCTTGGCAGATGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKWFRAC*AWQMSV Trigger: GACAGACATCTGCCAAGCCAAACAGGCCCGAAACCA...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | CCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTCGGAACCACAACTCTTaGGAAGAAGTCAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PAPLDANNPGDSVYKVFSRNHNS*EEVSSC Trigger: GCAGGAGCTGACTTCTTCCAAAGAGTTGTGGTTCCG...AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTCATCGAATTTCACCTTaGGTGAGCAGCACGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: IKCSCPAELKRPSSCSVSHRISP*VSSTAM Trigger: CATGGCCGTGCTGCTCACCAAAGGTGAAATTCGATG...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGGAGAGGATCTTATCGTaGCTGAGGTCTGCTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: DKVLLSSRTQKAFKLFSKERILS*LRSACL Trigger: GAGACAAGCAGACCTCAGCAACGATAAGATCCTCTC...CTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | CCAGCTCCCTTGGATGCAAATAACCCTGGTGACAGTGTGTACAAAGTCTTCTCTTCAATTCCAGCTCCCTaGGATGCAAATAACCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PAPLDANNPGDSVYKVFSSIPAP*DANNPG Trigger: ACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGA...AGAGAAGACTTTGTACACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | ATAAAGTGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTCAGCTCCTGCACCTaGGTGATAAGGTTTCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: IKCSCPAELKRPSSCSVSVSSCT*VIRFLL Trigger: TAGCAGAAACCTTATCACCAAGGTGCAGGAGCTGAC...ACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | TGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTAGTTATTCCAAGTCTAACTTaGCAACCTGCCCCTTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: CSCPAELKRPSSCSVSVVIPSLT*QPAPFW Trigger: CCAAAAAGGGGCAGGTTGCAAAGTTAGACTTGGAAT...AACTACACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS-3UTR CAA 90 bp | TGCTCCTGTCCAGCAGAACTCAAAAGGCCTTCAAGCTGTTCAGTAAGTGTAGTTGTTGCTGAGGTCTGCTaGTCTCATTTTATCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: CSCPAELKRPSSCSVSVVVAEVC*SHFITG Trigger: ACCTGTGATAAAATGAGACAAGCAGACCTCAGCAAC...AACTACACTTACTGAACAGCTTGAAGGCCTTTTGAGTTCTGCTGGACAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375533.6 |
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| CDS GCA 72 bp | TCGGGCCTGTTTGGCTTGGCAGATGTCTGTCGTGCTTaGAAGAGAGTCCAGGCAGCCATGGGTGAGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SGLFGLADVCRA*KRVQAAMGEWG Trigger: TCCCCACTCACCCATGGCTGCCTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 90 bp | CAATGTGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTTGGCTaGGCAGATGTCTGTCGTGCTTGCAAGAGAGTCCAGGCAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: QCGYGGARVVSGLFG*ADVCRACKRVQAAM Trigger: CATGGCTGCCTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 72 bp | AATCAGCCCTCCAGCAATGGGCACGGCAATGACCGCTaGCCGGAACCACAACTCTTTGGAAGAAGTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: NQPSSNGHGNDR*PEPQLFGRSQL Trigger: GAGCTGACTTCTTCCAAAGAGTTGTGGTTCCGGGCAGCGGTCATTGCCGTGCCCATTGCTGGAGGGCTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 72 bp | GTGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTaGGCTTGGCAGATGTCTGTCGTGCTTGCAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VGMVVPEWFRAC*AWQMSVVLARE Trigger: CTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 72 bp | GGCACGGCAATGACCGCTGCCCGGAACCACAACTCTTaGGAAGAAGTCAGCTCCTGCACCTTGGTGATAAGG | + |
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Preference number: 6 (lower is better) Translates to: GTAMTAARNHNS*EEVSSCTLVIR Trigger: CCTTATCACCAAGGTGCAGGAGCTGACTTCTTCCAAAGAGTTGTGGTTCCGGGCAGCGGTCATTGCCGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 90 bp | CATTCCAATGTGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTaGGCTTGGCAGATGTCTGTCGTGCTTGCAAGAGAGTCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HSNVGMVVPEWFRAC*AWQMSVVLARESRQ Trigger: CTGCCTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CCA 72 bp | TGGGTATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTTaGCTTGGCAGATGTCTGTCGTGCTTGCAAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: WVWWCQSGFGPV*LGRCLSCLQES Trigger: ACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 72 bp | TATGGTGGTGCCAGAGTGGTTTCGGGCCTGTTTGGCTaGGCAGATGTCTGTCGTGCTTGCAAGAGAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: YGGARVVSGLFG*ADVCRACKRVQ Trigger: CTGGACTCTCTTGCAAGCACGACAGACATCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS TCA 72 bp | TCCAGGCAGCCATGGGTGAGTGGGGAATTTGAGTTCTaGGGATCAAGAAGTCTAGAGAAGCAGGCGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRQPWVSGEFEF*GSRSLEKQALS Trigger: GCTCAGCGCCTGCTTCTCTAGACTTCTTGATCCTCAGAACTCAAATTCCCCACTCACCCATGGCTGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS TCA 72 bp | AATTCCAGCTTCCCGTGCCCACTGTACATGCCCCAGTaGACAAGCGAGAGGATCTTATCGTTGCTGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: NSSFPCPLYMPQ*TSERILSLLRS Trigger: AGACCTCAGCAACGATAAGATCCTCTCGCTTGTTCACTGGGGCATGTACAGTGGGCACGGGAAGCTGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 72 bp | TGTCTTCATGACAGCATTCCAATGTGGGTATGGTGGTaGCAGAGTGGTTTCGGGCCTGTTTGGCTTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: CLHDSIPMWVWW*QSGFGPVWLGR Trigger: TCTGCCAAGCCAAACAGGCCCGAAACCACTCTGGCACCACCATACCCACATTGGAATGCTGTCATGAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 72 bp | GTCATACGAATTCCAGCTTCCCGTGCCCACTGTACATaGCCCAGTGAACAAGCGAGAGGATCTTATCGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VIRIPASRAHCT*PSEQARGSYRC Trigger: GCAACGATAAGATCCTCTCGCTTGTTCACTGGGGCATGTACAGTGGGCACGGGAAGCTGGAATTCGTATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 90 bp | GGAATGGTGTCCGTGAAAGCTGTAGTGCAAACGGGAGAGCATCTGTaGCCGCTGATCCTGCAGCCTCTTATTTTCACTTCGAAGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: GMVSVKAVVQTGEHL*PLILQPLIFTSKHP Trigger: AGGATGCTTCGAAGTGAAAATAAGAGGCTGCAGGATCAGCGGCAACAGATGCTCTCCCGTTTGCACTACAGCTTTCACGGACACCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 72 bp | GCCCGGAACCACAACTCTTTGGAAGAAGTCAGCTCCTaGACCTTGGTGATAAGGTTTCTGCTACCATCATGC | + |
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Preference number: 6 (lower is better) Translates to: ARNHNSLEEVSS*TLVIRFLLPSC Trigger: GCATGATGGTAGCAGAAACCTTATCACCAAGGTGCAGGAGCTGACTTCTTCCAAAGAGTTGTGGTTCCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CAA 72 bp | TCCGTGAAAGCTGTAGTGCAAACGGGAGAGCATCTGTaGCCGCTGATCCTGCAGCCTCTTATTTTCACTTCG | + |
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Preference number: 6 (lower is better) Translates to: SVKAVVQTGEHL*PLILQPLIFTS Trigger: CGAAGTGAAAATAAGAGGCTGCAGGATCAGCGGCAACAGATGCTCTCCCGTTTGCACTACAGCTTTCACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS TCA 72 bp | TTTTATCACAGGTCAGACAGCAGTTCTCGTGCCCACTaGCCGGCACCATGCATTCCAAGTCTAACTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FYHRSDSSSRAH*PAPCIPSLTLQ Trigger: TTGCAAAGTTAGACTTGGAATGCATGGTGCCGGTCAGTGGGCACGAGAACTGCTGTCTGACCTGTGATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS TCA 72 bp | TGCCCCAGTGAACAAGCGAGAGGATCTTATCGTTGCTaGGGTCTGCTTGTCTCATTTTATCACAGGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: CPSEQARGSYRC*GLLVSFYHRSD Trigger: GTCTGACCTGTGATAAAATGAGACAAGCAGACCTCAGCAACGATAAGATCCTCTCGCTTGTTCACTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS GCA 72 bp | TGGGAGGAGAGAGAACATCGTGCAGCCCTCTGTAATTaGACATGTCTTCATGACAGCATTCCAATGTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: WEEREHRAALCN*TCLHDSIPMWV Trigger: TACCCACATTGGAATGCTGTCATGAAGACATGTGCAATTACAGAGGGCTGCACGATGTTCTCTCTCCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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| CDS CCA 72 bp | TGCATTCCAAGTCTAACTTTGCAACCTGCCCCTTTTTaGAATGGTGTCCGTGAAAGCTGTAGTGCAAACGGG | + |
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Preference number: 6 (lower is better) Translates to: CIPSLTLQPAPF*NGVRESCSANG Trigger: CCCGTTTGCACTACAGCTTTCACGGACACCATTCCAAAAAGGGGCAGGTTGCAAAGTTAGACTTGGAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000375533.6 ENST00000497699.1 |
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