RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140320

Ensembl transcript IDs: ENST00000416165.6, ENST00000560846.1, ENST00000561234.5, ENST00000561464.1

Found 656 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTGGCAGCAAGGGCCCAGAATGAGCAGGCTCCAAGGCTGGCTCTaGAGAGCCCCCACTGCCACTCTGCCAACCTCATTTACTGCCCCA +
Preference number: 1 (lower is better)
Translates to: PWQQGPRMSRLQGWL*RAPTATLPTSFTAP
Trigger: TGGGGCAGTAAATGAGGTTGGCAGAGTGGCAGTGGGGGCTCTGCAGAGCCAGCCTTGGAGCCTGCTCATTCTGGGCCCTTGCTGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 90 bp AGCTGTCCTCACCCAGTGCCACCTCCTAAGCCTGCTGGGTTCATCTaGCCTTCCTCCCTAAGGGAAGACCCAGGGCTGCAGTTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: SCPHPVPPPKPAGFI*PSSLREDPGLQFSA
Trigger: GGCTGAGAACTGCAGCCCTGGGTCTTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp AACTTTCTGGGAAGCCAGACCCGCTGGGTGGCCGTCTCTGGGAGGTaGACAGGAGACTCCCACAAGTGGGCCACACCCATGACTGTGAGA +
Preference number: 1 (lower is better)
Translates to: NFLGSQTRWVAVSGR*TGDSHKWATPMTVR
Trigger: TCTCACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp CCCCACAATCATCAGTTAACTTTCTGGGAAGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCA +
Preference number: 1 (lower is better)
Translates to: PHNHQLTFWEARPAG*PSLGGGQETPTSGP
Trigger: TGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATGATTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp GACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGTCCCAGGCTGAAGGGGAAGCGGCGG +
Preference number: 1 (lower is better)
Translates to: DSGSLCLKGTSSELC*DLGKPGPRLKGKRR
Trigger: CCGCCGCTTCCCCTTCAGCCTGGGACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 90 bp CCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTCAGAGCTGTaGTGGGATCTAGGAAAGCCTGGTCCCAGGCTGAAGGGGAAGCGG +
Preference number: 1 (lower is better)
Translates to: PDSGSLCLKGTSSEL*WDLGKPGPRLKGKR
Trigger: CCGCTTCCCCTTCAGCCTGGGACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp CAAACCCCACAATCATCAGTTAACTTTCTGGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGG +
Preference number: 1 (lower is better)
Translates to: QTPQSSVNFLGSQTR*VAVSGRWTGDSHKW
Trigger: CCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATGATTGTGGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp CCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTaGGGGAGCCCTCAGGGTTCATTTCCACCTCCCTCTGCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: PIRSNSSTKGQGMAS*GSPQGSFPPPSAAP
Trigger: AGGGGCTGCAGAGGGAGGTGGAAATGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp TTCCCTCCCAGATATGACAAACCCCACAATCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGGTGGCCGTCTCTGGGAGGTGGACAG +
Preference number: 1 (lower is better)
Translates to: FPPRYDKPHNHQLTF*EARPAGWPSLGGGQ
Trigger: CTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATGATTGTGGGGTTTGTCATATCTGGGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATaGCAAGTTGGGGGAGCCCTCAGGGTTCATTTCCACCTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: PNDQSGATHLLRDRA*QVGGALRVHFHLPL
Trigger: CAGAGGGAGGTGGAAATGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 90 bp ATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCTACTaGAGGGCAAAGGAGGAAAGCCAGAGAAAAGGCCTCAAGTCTAGG +
Preference number: 1 (lower is better)
Translates to: MTVRGGSTCPSTSCY*RAKEESQRKGLKSR
Trigger: CCTAGACTTGAGGCCTTTTCTCTGGCTTTCCTCCTTTGCCCTGCAGTAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 90 bp GCAAGGGGAGCCACAGCACTCCTTTGGTTTGATTTCAGGTGGGTGTaGCTTGAAGAATCACGTGTGAAGTTCTGCAAGAGGTTTCCTGGA +
Preference number: 1 (lower is better)
Translates to: ARGATALLWFDFRWV*LEESRVKFCKRFPG
Trigger: TCCAGGAAACCTCTTGCAGAACTTCACACGTGATTCTTCAAGCCACACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGCTCCCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 90 bp AGGAAAGCCAGAGAAAAGGCCTCAAGTCTAGGAAGAGGAAGTCAATaGTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAA +
Preference number: 1 (lower is better)
Translates to: RKAREKASSLGRGSQ*SGSQTLALYASKEQ
Trigger: TTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTTCCTCTTCCTAGACTTGAGGCCTTTTCTCTGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 90 bp TCCTTTGGTTTGATTTCAGGTGGGTGTGGCTTGAAGAATCACGTGTaGAGTTCTGCAAGAGGTTTCCTGGAACCTCCATGTGTAAGGCAA +
Preference number: 1 (lower is better)
Translates to: SFGLISGGCGLKNHV*SSARGFLEPPCVRQ
Trigger: TTGCCTTACACATGGAGGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGATTCTTCAAGCCACACCCACCTGAAATCAAACCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 90 bp TTTGATTTCAGGTGGGTGTGGCTTGAAGAATCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAA +
Preference number: 1 (lower is better)
Translates to: FDFRWVWLEESRVKF*KRFPGTSMCKARGK
Trigger: TTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGATTCTTCAAGCCACACCCACCTGAAATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 90 bp TGTCAAAAGGGAGGTGAGGAAAGGTCCTTCCTCCCTTGTAAACACTaGAATACAGATCTGGGAAACCAGGATCAACACACACAAAAAGTG +
Preference number: 1 (lower is better)
Translates to: CQKGGEERSFLPCKH*NTDLGNQDQHTQKV
Trigger: CACTTTTTGTGTGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGTGTTTACAAGGGAGGAAGGACCTTTCCTCACCTCCCTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGTTCCTGAAAGACCTTaGCCCTCCTTCCCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHVPERP*PSFPPP
Trigger: TGGGGGCGGGAAGGAGGGGCAAGGTCTTTCAGGAAC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAAGCCTGGTCCCAGGCTaGAGGGGAAGCGGCGGGTCA +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSLVPG*RGSGGS
Trigger: TGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGACTCTGGCTCTCTATaGCTCAAAGGAACAAGCTCA +
Preference number: 2 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHDSGSL*LKGTSS
Trigger: TGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKARPAG*PSLGGG
Trigger: TCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGCGGGTCACAGTGGGTaGGGTAAAGCTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKAGHSG*GKAGPH
Trigger: GTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRGSQTR*VAVSGR
Trigger: CCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CAA 90 bp CTCCCACAAGTGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTaGTCCCAGCACCAGTTGCTACTGCAGGGCAAAGGAGGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LPQVGHTHDCERWVN*SQHQLLLQGKGGKP
Trigger: TGGCTTTCCTCCTTTGCCCTGCAGTAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCACTTGTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGCCCCCTAACCAAGTaGTGTGCTTCAAGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMGPLTK*CASSSA
Trigger: GGCACTGCTTGAAGCACAGCACTTGGTTAGGGGGCC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGGGAAGACCCAGGGCTaGAGTTCTCAGCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRGKTQG*SSQPQP
Trigger: GGGCTGGGGCTGAGAACTGCAGCCCTGGGTCTTCCC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTC +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRLGGRL*EVDRRL
Trigger: GAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTC +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKLGGRL*EVDRRL
Trigger: GAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKLWGAA*GENRAS
Trigger: AGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGGAAGACCCAGGGCTaGAGTTCTCAGCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGKTQG*SSQPQP
Trigger: GGGCTGGGGCTGAGAACTGCAGCCCTGGGTCTTCCC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGCTGTCCTCACCCAGTaGCACCTCCTAAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKAVLTQ*HLLSLL
Trigger: CAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCKLRPL*PPNQVL
Trigger: CAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCSSELC*DLGKPG
Trigger: ACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCTGGAAGCCAGACTCTaGCTCTCTATGCCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCLEARL*LSMPQR
Trigger: CCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQGSQTR*VAVSGR
Trigger: CCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAAGACTAGGGAAAGGGTaGCAGGGCAAGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKRLGKG*QGKGSH
Trigger: GTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGTCT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLWGAA*GENRAS
Trigger: AGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: QAWPSLREDYFSEISTQGPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGGAGACTCCCACAAGTaGGCCACACCCATGACTGTG +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKGDSHK*ATPMTV
Trigger: CACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGTTGGGTCTGGTTCCTaGAAGACCTTGCCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTVGSGS*KTLPLL
Trigger: AAGGAGGGGCAAGGTCTTTCAGGAACCAGACCCAAC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGTTGGGTCTGGTTCCTaGAAGACCTTGCCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRVGSGS*KTLPLL
Trigger: AAGGAGGGGCAAGGTCTTTCAGGAACCAGACCCAAC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGTTCCTGAAAGACCTTaGCCCTCCTTCCCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVVPERP*PSFPPP
Trigger: TGGGGGCGGGAAGGAGGGGCAAGGTCTTTCAGGAAC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAGGCCCAAGCCACACTaGACTCCACTCCCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVRPKPH*TPLPLP
Trigger: TGGGAGAGGGAGTGGAGTGCAGTGTGGCTTGGGCCT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACCTGCTGGGTTCATCTaGCCTTCCTCCCTAAGGGAA +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKPAGFI*PSSLRE
Trigger: TTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAGACTAGGGAAAGGGTaGCAGGGCAAGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVRLGKG*QGKGSH
Trigger: GTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGTCT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCCTGAAAGACCTTaGCCCTCCTTCCCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQVPERP*PSFPPP
Trigger: TGGGGGCGGGAAGGAGGGGCAAGGTCTTTCAGGAAC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKKLRPL*PPNQVL
Trigger: CAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSSELC*DLGKPG
Trigger: ACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKSSELC*DLGKPG
Trigger: ACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTHQLTF*EARPAG
Trigger: CCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAAGACTAGGGAAAGGGTaGCAGGGCAAGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQRLGKG*QGKGSH
Trigger: GTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGTCT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGAGCAGGTCCGTGGACTaGTACAGTGTTGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSRSVD*YSVDSC
Trigger: GCAAGAATCAACACTGTATCAGTCCACGGACCTGCT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGGCCCCCTAACCAAGTaGTGTGCTTCAAGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQGPLTK*CASSSA
Trigger: GGCACTGCTTGAAGCACAGCACTTGGTTAGGGGGCC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGATGCCCTTGTGGAAGTaGTCAGCTAGCAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRMPLWK*SASRFP
Trigger: TGGGAACCTGCTAGCTGAGCACTTCCACAAGGGCAT...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATACAGAAGGGCCTGTTaGGTCTGGTTCCTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTYRRAC*VWFLKD
Trigger: GTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTGGAAGCCAGACTCTaGCTCTCTATGCCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLEARL*LSMPQR
Trigger: CCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGGAGACTCCCACAAGTaGGCCACACCCATGACTGTG +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQGDSHK*ATPMTV
Trigger: CACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVARPAG*PSLGGG
Trigger: TCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRHQLTF*EARPAG
Trigger: CCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCGGGTCACAGTGGGTaGGGTAAAGCTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVAGHSG*GKAGPH
Trigger: GTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACTTCCCTCCCAGATATaGCAAACCCCACAATCATCA +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTLPSQI*QTPQSS
Trigger: TGATGATTGTGGGGTTTGTCATATCTGGGAGGGAAG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGTCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSRVKF*KRFPGT
Trigger: GGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGA...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVKLRPL*PPNQVL
Trigger: CAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGATTTCAGGTGGGTGTaGCTTGAAGAATCACGTGTG +
Preference number: 2 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTDFRWV*LEESRV
Trigger: CACACGTGATTCTTCAAGCCACACCCACCTGAAATC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGAGCTCAGCAGGTCCGTaGACTGATACAGTGTTGATT +
Preference number: 2 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSSAGP*TDTVLI
Trigger: AATCAACACTGTATCAGTCCACGGACCTGCTGAGCT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCAGGTGGGTGTGGCTTaGAGAATCACGTGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVQVGVA*RITCEV
Trigger: AACTTCACACGTGATTCTTCAAGCCACACCCACCTG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTACAGAAGGGCCTGTTaGGTCTGGTTCCTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSYRRAC*VWFLKD
Trigger: GTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGAGCTCAGCAGGTCCGTaGACTGATACAGTGTTGATT +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRSSAGP*TDTVLI
Trigger: AATCAACACTGTATCAGTCCACGGACCTGCTGAGCT...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGCCACAGCACTCCTTTaGTTTGATTTCAGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQATALL*FDFRWV
Trigger: CACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGGACTGATACAGTGTTaGTTCTTGCTAGGATGTAAA +
Preference number: 2 (lower is better)
Translates to: LQASPKPNDQSGATHLLRGLIQC*FLLGCK
Trigger: TTTACATCCTAGCAAGAATCAACACTGTATCAGTCC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAACAAGCTCAGAGCTGTaGTGGGATCTAGGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVTSSEL*WDLGKP
Trigger: AGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp CTTTCTGGGAAGCCAGACCCGCTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTCCCACAAGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: LSGKPDPLGGRL*EVDRRLPQVGH
Trigger: GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CAA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACACCACAGAAGGTACCTaGGGCCAAGCTGAGAGTTCT +
Preference number: 3 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHTTEGT*GQAESS
Trigger: AGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 72 bp CACCCAGTGCCACCTCCTAAGCCTGCTGGGTTCATCTaGCCTTCCTCCCTAAGGGAAGACCCAGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: HPVPPPKPAGFI*PSSLREDPGLQ
Trigger: CTGCAGCCCTGGGTCTTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGGCTTAGGAGGTGGCACTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp AACAAGCTCAGAGCTGTGCTGGGATCTAGGAAAGCCTaGTCCCAGGCTGAAGGGGAAGCGGCGGGTCACAGT +
Preference number: 3 (lower is better)
Translates to: NKLRAVLGSRKA*SQAEGEAAGHS
Trigger: ACTGTGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp CATCAGTTAACTTTCTGGGAAGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACA +
Preference number: 3 (lower is better)
Translates to: HQLTFWEARPAG*PSLGGGQETPT
Trigger: TGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCCATTTCCCTCAGGCTaGGCCCAGCCTCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCPFPSG*AQPQRR
Trigger: TCTTCTCTGAGGCTGGGCCAAGCCTGAGGGAAATGG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp CAATCATCAGTTAACTTTCTGGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCC +
Preference number: 3 (lower is better)
Translates to: QSSVNFLGSQTR*VAVSGRWTGDS
Trigger: GGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 72 bp GGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCTGGGCAACAGGAACAA +
Preference number: 3 (lower is better)
Translates to: GTEPVSLLWGAA*GENRASGQQEQ
Trigger: TTGTTCCTGTTGCCCAGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 72 bp GGCTCTCTATGCCTCAAAGGAACAAGCTCAGAGCTGTaGTGGGATCTAGGAAAGCCTGGTCCCAGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: GSLCLKGTSSEL*WDLGKPGPRLK
Trigger: CTTCAGCCTGGGACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGTTCCTTTGAGGCATAGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp CCAAGAAAACCACAGGCCAGCAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTGTGCTTCAAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: PRKPQASKLRPL*PPNQVLCFKQC
Trigger: GCACTGCTTGAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGGTTTTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp AGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTaGGGGAGCCCTCAGGGTTCATTTCCACCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: SNSSTKGQGMAS*GSPQGSFPPPS
Trigger: AGAGGGAGGTGGAAATGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CAA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCCATTTCCCTCAGGCTaGGCCCAGCCTCAGAGAAGA +
Preference number: 3 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVPFPSG*AQPQRR
Trigger: TCTTCTCTGAGGCTGGGCCAAGCCTGAGGGAAATGG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACAGCACTCCTTTGGTTaGATTTCAGGTGGGTGTGGC +
Preference number: 3 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTQHSFG*ISGGCG
Trigger: GCCACACCCACCTGAAATCAAACCAAAGGAGTGCTG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp AGATATGACAAACCCCACAATCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGGTGGCCGTCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: RYDKPHNHQLTF*EARPAGWPSLG
Trigger: TCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATGATTGTGGGGTTTGTCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 72 bp CAACCCTCTCCCAGCACCCATCTTCCCTCCCAGATATaGCAAACCCCACAATCATCAGTTAACTTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: QPSPSTHLPSQI*QTPQSSVNFLG
Trigger: TCCCAGAAAGTTAACTGATGATTGTGGGGTTTGTCATATCTGGGAGGGAAGATGGGTGCTGGGAGAGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 72 bp AGAGAAAAGGCCTCAAGTCTAGGAAGAGGAAGTCAATaGTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCA +
Preference number: 3 (lower is better)
Translates to: REKASSLGRGSQ*SGSQTLALYAS
Trigger: TGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTTCCTCTTCCTAGACTTGAGGCCTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR GCA 72 bp AGGTGGGTGTGGCTTGAAGAATCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACCTCCATGTGTAAGGCA +
Preference number: 3 (lower is better)
Translates to: RWVWLEESRVKF*KRFPGTSMCKA
Trigger: TGCCTTACACATGGAGGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGATTCTTCAAGCCACACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR CCA 72 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTaGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAC +
Preference number: 3 (lower is better)
Translates to: GNLHPGEPQKVP*AKLRVLMLFLY
Trigger: GTATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 72 bp TTGATTTCAGGTGGGTGTGGCTTGAAGAATCACGTGTaGAGTTCTGCAAGAGGTTTCCTGGAACCTCCATGT +
Preference number: 3 (lower is better)
Translates to: LISGGCGLKNHV*SSARGFLEPPC
Trigger: ACATGGAGGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGATTCTTCAAGCCACACCCACCTGAAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 72 bp GGAGGTGAGGAAAGGTCCTTCCTCCCTTGTAAACACTaGAATACAGATCTGGGAAACCAGGATCAACACACA +
Preference number: 3 (lower is better)
Translates to: GGEERSFLPCKH*NTDLGNQDQHT
Trigger: TGTGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGTGTTTACAAGGGAGGAAGGACCTTTCCTCACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
3UTR TCA 72 bp GCTGCAGCTCAGCAGGTCCGTGGACTGATACAGTGTTaGTTCTTGCTAGGATGTAAATTAGTGCAATCTACA +
Preference number: 3 (lower is better)
Translates to: AAAQQVRGLIQC*FLLGCKLVQST
Trigger: TGTAGATTGCACTAATTTACATCCTAGCAAGAATCAACACTGTATCAGTCCACGGACCTGCTGAGCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGCGGTGGGGATCCCCTaGTCGACTGCGGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHAVGIP*STAAGA
Trigger: GGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGATCCCCTGCTCGACTaGGGCGGGTGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHDPLLD*GGCLPG
Trigger: GCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGGCCAGGGTCTTCACTaGATGGGGCCGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHGQGLH*MGPGWG
Trigger: CCCCCAGCCCGGCCCCATCCAGTGAAGACCCTGGCC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACAGCCTGGTCCCAGGCTaGAGGGGAAGCGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHSLVPG*RGSGGS
Trigger: TGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTCGACTGCGGCGGGTaGCTGCCAGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLDCGG*LPGCWC
Trigger: ACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACTTGGCCTCGGGGCCTTaGGTGCTGGGGGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLASGP*VLGAQW
Trigger: CCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAA...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGCGGGTGAGGCTGGGTaGCCAGCTTCCGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHAGEAG*PASGRG
Trigger: TCCTCTCCCGGAAGCTGGCCACCCAGCCTCACCCGC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHARPAG*PSLGGG
Trigger: TCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGACCTTGGGCCACTTTaGCCTCGGGGCCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHDLGPL*PRGLGC
Trigger: GCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACAGGGTCCGTGTCCTCTaGCACTGTGCGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHRVRVL*HCAVGW
Trigger: CCACCCCACCGCACAGTGCCAGAGGACACGGACCCT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGGTGCTGGAAAGGGGTaGCTGAGGGCACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHGAGKG*LRALSS
Trigger: CGAGCTCAGTGCCCTCAGGCACCCCTTTCCAGCACC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGGGCTCTGCTGCAGGTaGCACACTGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHGLCCR*HTGYRA
Trigger: TGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGTGCTGTCTTTCGGCTaGGGAGGCCTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHVLSFG*GGLHLG
Trigger: GCCGAGGTGAAGGCCTCCCCAGCCGAAAGACAGCAC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLGGRL*EVDRRL
Trigger: GAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTGCCCCCAGGGGTATaGCCTTGTGGAAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLPPGV*PCGSAQ
Trigger: CTGAGCACTTCCACAAGGGCATACCCCTGGGGGCAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACATCGGGTGCTGGCTCTaGAGACAGGTCCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHIGCWL*RQVPTS
Trigger: GGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGAT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCCTCGGGGCCTTGGGTaGTGGGGGCTCAGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCPRGLG*WGLSGA
Trigger: CGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACTGGGCGCTTACGAAGTaGGTAATTCTTGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHWALTK*VILAAP
Trigger: GGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCA...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGGCCAGGGTCTTCACTaGATGGGGCCGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFGQGLH*MGPGWG
Trigger: CCCCCAGCCCGGCCCCATCCAGTGAAGACCCTGGCC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGCGACAGCTGAGGTGTaGGGAAAGAGGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHATAEV*GKRADA
Trigger: TGCATCAGCCCTCTTTCCCCACACCTCAGCTGTCGC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGCTCTCGGCGGCCAGTaGGGCCCGAACTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFALGGQ*GPNSAW
Trigger: CCATGCTGAGTTCGGGCCTCACTGGCCGCCGAGAGC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGCTCTCGGCGGCCAGTaGGGCCCGAACTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCALGGQ*GPNSAW
Trigger: CCATGCTGAGTTCGGGCCTCACTGGCCGCCGAGAGC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTGCTTAGGGGCAGGTaGCTCCTCGCCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMLLRGR*LLAWAP
Trigger: GGGCGCCCAGGCGAGGAGTCACCTGCCCCTAAGCAG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGAGTGGGTGGGCGGGTaGGGCTGGGTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGEWVGG*GWVASF
Trigger: GAAGCTGGCCACCCAGCCTCACCCGCCCACCCACTC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGGTCTTTCGTGGGCCTaGTTTGAGAAGGACGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHGLSWA*FEKDGV
Trigger: GACACCGTCCTTCTCAAATCAGGCCCACGAAAGACC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTGTCAAAAGGGAGGTaGGGAAAGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLSKGR*GKVLPP
Trigger: GGGAGGAAGGACCTTTCCTCACCTCCCTTTTGACAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACACACCCTCAACCCCCTaGTCCATGTTGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHTPSTP*SMLLSS
Trigger: GGAAGACAGCAACATGGAGCAGGGGGTTGAGGGTGT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGATCCCCTGCTCGACTaGGGCGGGTGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMDPLLD*GGCLPG
Trigger: GCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCGGTGGGGATCCCCTaGTCGACTGCGGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVAVGIP*STAAGA
Trigger: GGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCCTCGGGGCCTTGGGTaGTGGGGGCTCAGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGPRGLG*WGLSGA
Trigger: CGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCGGTCACGGCTGCGGTaGGGATCCCCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCRSRLR*GSPARL
Trigger: CAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCGGGGCCTTGGGTGCTaGGGGCTCAGTGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRGLGC*GLSGAP
Trigger: GGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGCGGGTGAGGCTGGGTaGCCAGCTTCCGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCAGEAG*PASGRG
Trigger: TCCTCTCCCGGAAGCTGGCCACCCAGCCTCACCCGC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGCTCTCGGCGGCCAGTaGGGCCCGAACTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGALGGQ*GPNSAW
Trigger: CCATGCTGAGTTCGGGCCTCACTGGCCGCCGAGAGC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGCTTAGGGGCAGGTaGCTCCTCGCCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLLRGR*LLAWAP
Trigger: GGGCGCCCAGGCGAGGAGTCACCTGCCCCTAAGCAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCTGCTTAGGGGCAGGTaGCTCCTCGCCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDLLRGR*LLAWAP
Trigger: GGGCGCCCAGGCGAGGAGTCACCTGCCCCTAAGCAG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGTGGGTGGGCGGGTaGGGCTGGGTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDEWVGG*GWVASF
Trigger: GAAGCTGGCCACCCAGCCTCACCCGCCCACCCACTC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGCGGGTCACAGTGGGTaGGGTAAAGCTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFAGHSG*GKAGPH
Trigger: GTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGCGGGTCACAGTGGGTaGGGTAAAGCTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCAGHSG*GKAGPH
Trigger: GTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGACTGCGGCGGGTGCCTaGCAGGCTGCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGTAAGA*QAAGVL
Trigger: GAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGATCACGGTCACGGCTaGGGTGGGGATCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCDHGHG*GGDPLL
Trigger: GAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCATGGGGGACGGGCTCTaGTGCAGGTGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCMGDGL*CRWHTG
Trigger: CCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCAT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCGCTGGACACGTGGCTaGTTGGGGTGGCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCRWTRG*LGWLGL
Trigger: CAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAAGGCCCCGGCCGGGCTaGAATCCGGCGGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKRPRPG*NPAAGT
Trigger: GGTTCCAGCCGCCGGATTCCAGCCCGGCCGGGGCCT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416165.6
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGGCCAGGGTCTTCACTaGATGGGGCCGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVGQGLH*MGPGWG
Trigger: CCCCCAGCCCGGCCCCATCCAGTGAAGACCCTGGCC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCGGGGCCTTGGGTGCTaGGGGCTCAGTGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRRGLGC*GLSGAP
Trigger: GGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGTTGGCCTCGGGGCCTTaGGTGCTGGGGGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGLASGP*VLGAQW
Trigger: CCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAA...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCGTGGCTGCTTGGGGTaGCTAGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRGCLG*LGLRAA
Trigger: GGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHSSELC*DLGKPG
Trigger: ACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTGGAAGCCAGACTCTaGCTCTCTATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLEARL*LSMPQR
Trigger: CCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGCCAGACCCGCTGGGTaGCCGTCTCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMARPAG*PSLGGG
Trigger: TCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHHQLTF*EARPAG
Trigger: CCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGAGTGGGTGGGCGGGTaGGGCTGGGTGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLREWVGG*GWVASF
Trigger: GAAGCTGGCCACCCAGCCTCACCCGCCCACCCACTC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGGAGGTTTGGCGCTCTaGGGGCACGCACGGGCTACT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGGGLAL*GHARAT
Trigger: AGTAGCCCGTGCGTGCCCTCAGAGCGCCAAACCTCC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGCGGGTCACAGTGGGTaGGGTAAAGCTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGAGHSG*GKAGPH
Trigger: GTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTCACCCAAACCCAATaGCCAATCAGGAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLTQTQ*PIRSNS
Trigger: TGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGCAAGGGCCCAGAATaGGCAGGCTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCSKGPE*AGSKAG
Trigger: GCCAGCCTTGGAGCCTGCTCATTCTGGGCCCTTGCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCGGGCTCCACGCTGCTaGGTCAGCGCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRRAPRC*VSASSW
Trigger: CCAGGAGGAGGCGCTGACGCAGCAGCGTGGAGCCCG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416165.6
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATCCCGGGCTCCACGCTaGTGCGTCAGCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSRAPR*CVSASS
Trigger: GGAGGAGGCGCTGACGCAGCAGCGTGGAGCCCGGGA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416165.6
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCTGGGCTCTCGGGCATaGCTGGCTCCACACCCTCAA +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCLGSRA*LAPHPQ
Trigger: TTGAGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACACAAGCTCAGAGCTGTaGTGGGATCTAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHTSSEL*WDLGKP
Trigger: AGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCCCTGTGAGGTGACCTaGGCTCTCGGGCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMPCEVT*ALGHAW
Trigger: CCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACCTTCTCAGGAACCAATaGGCGCTTACGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHLLRNQ*ALTKWV
Trigger: TACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAG...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCGGTCACGGCTGCGGTaGGGATCCCCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRSRLR*GSPARL
Trigger: CAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCGGTCACGGCTGCGGTaGGGATCCCCTGCTCGACTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVRSRLR*GSPARL
Trigger: CAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGTGAGGTGCAGCCACTaGGGACAGCTTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFVRCSH*GQLALR
Trigger: CCTGAGGGCAAGCTGTCCCCAGTGGCTGCACCTCAC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCCCCAGGGAGGGTGCTaGAAAGGGGTGCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVPQGGC*KGVPEG
Trigger: GCCCTCAGGCACCCCTTTCCAGCACCCTCCCTGGGG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCAACCGCTGGGAGGTTTaGCGCTCTGAGGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFNRWEV*RSEGTH
Trigger: GTGCGTGCCCTCAGAGCGCCAAACCTCCCAGCGGTT...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACGTGGCTGCTTGGGGTaGCTAGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKRGCLG*LGLRAA
Trigger: GGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGTGGGCGCTGGACACGTaGCTGCTTGGGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMWALDT*LLGVAR
Trigger: CCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCA...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACGAGGGCGTGGGCGCTaGACACGTGGCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKRGRGR*TRGCLG
Trigger: CCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGGGTCCGTGTCCTCTaGCACTGTGCGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRVRVL*HCAVGW
Trigger: CCACCCCACCGCACAGTGCCAGAGGACACGGACCCT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGSQTR*VAVSGR
Trigger: CCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGCAGGCTCCAAGGCTaGCTCTGCAGAGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCSRLQG*LCRAPT
Trigger: AGTGGGGGCTCTGCAGAGCCAGCCTTGGAGCCTGCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCGGCGCCCTGTGAGGTaGCCTGGGCTCTCGGGCATG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRRRPVR*PGLSGM
Trigger: CATGCCCGAGAGCCCAGGTCACCTCACAGGGCGCCG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGTCCGAGGTGGGTGTCTaGAGATGGGGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGSEVGV*RWGTGS
Trigger: AGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGA...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGAGGTTTGGCGCTCTaGGGGCACGCACGGGCTACT +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGGLAL*GHARAT
Trigger: AGTAGCCCGTGCGTGCCCTCAGAGCGCCAAACCTCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACTCGACTGCGGCGGGTaGCTGCCAGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTLDCGG*LPGCWC
Trigger: ACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGCGGTGGGGATCCCCTaGTCGACTGCGGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSAVGIP*STAAGA
Trigger: GGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGGGACCTTCATCGGGTaGTGGCTCTGGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFGTFIG*WLWRQV
Trigger: GACCTGTCTCCAGAGCCAGCACCCGATGAAGGTCCC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAATGTAGTCGGCGGGGTTaGCAGGCATCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKCSRRG*QASAAA
Trigger: CGCCGCTGCCGATGCCTGGCAACCCCGCCGACTACA...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCCCCTCCTCGTGAGGTaGAGCCACTGGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGPLLVR*SHWGQL
Trigger: AAGCTGTCCCCAGTGGCTGCACCTCACGAGGAGGGG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGTGCTGGAAAGGGGTaGCTGAGGGCACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMGAGKG*LRALSS
Trigger: CGAGCTCAGTGCCCTCAGGCACCCCTTTCCAGCACC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGGACGGGCTCTGCTaGAGGTGGCACACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGDGLC*RWHTGY
Trigger: GTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATATGGGGGACGGGCTCTaGTGCAGGTGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDMGDGL*CRWHTG
Trigger: CCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCAT...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCCTGCGGGCAGCCTTaGTCCTTGCAGTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDACGQP*SLQCAC
Trigger: GCAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCGCTGGACACGTGGCTaGTTGGGGTGGCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRWTRG*LGWLGL
Trigger: CAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCGTGCATGCTGGGACTaGGGCCTCCCTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFRACWD*GLPVSA
Trigger: AGCACTTACAGGGAGGCCGCAGTCCCAGCATGCACG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGGCCCAAGCCACACTaGACTCCACTCCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCRPKPH*TPLPLP
Trigger: TGGGAGAGGGAGTGGAGTGCAGTGTGGCTTGGGCCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCTGCCCCCAGGGGTATaGCCTTGTGGAAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFLPPGV*PCGSAQ
Trigger: CTGAGCACTTCCACAAGGGCATACCCCTGGGGGCAG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGAAGACCCAGGGCTaGAGTTCTCAGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGKTQG*SSQPQP
Trigger: GGGCTGGGGCTGAGAACTGCAGCCCTGGGTCTTCCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGGGAAGACCCAGGGCTaGAGTTCTCAGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVGKTQG*SSQPQP
Trigger: GGGCTGGGGCTGAGAACTGCAGCCCTGGGTCTTCCC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCTCCAAGGCTGGCTCTaGAGAGCCCCCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGLQGWL*RAPTAT
Trigger: AGTGGCAGTGGGGGCTCTGCAGAGCCAGCCTTGGAG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCTCTCGGGCATGCCTaGCTCCACACCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVALGHA*LHTLNP
Trigger: GGGGTTGAGGGTGTGGAGCCAGGCATGCCCGAGAGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCGCCGCTTGCGGGGCTaGGCAAGGCCAGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRRRLRG*ARPGSS
Trigger: TGAAGACCCTGGCCTTGCCCAGCCCCGCAAGCGGCG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCATCGGGTGCTGGCTCTaGAGACAGGTCCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCIGCWL*RQVPTS
Trigger: GGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGAT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCAGTCTCTTGGGAGCTaGGTCTCCATCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGQSLGS*VSISAG
Trigger: CCCCGCCGAGATGGAGACCCAGCTCCCAAGAGACTG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCCATCTACTTCTGCATaGGCACGAGGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCPSTSA*ARGSRR
Trigger: CCTGCGGCTGCCTCGTGCCCATGCAGAAGTAGATGG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCGGGGCCTTGGGTGCTaGGGGCTCAGTGGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSRGLGC*GLSGAP
Trigger: GGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGACCTTGGGCCACTTTaGCCTCGGGGCCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVDLGPL*PRGLGC
Trigger: GCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGCGGGTGAGGCTGGGTaGCCAGCTTCCGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRAGEAG*PASGRG
Trigger: TCCTCTCCCGGAAGCTGGCCACCCAGCCTCACCCGC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGGCTCTGCTGCAGGTaGCACACTGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMGLCCR*HTGYRA
Trigger: TGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTCTGGGGCTCCGAGGTaGGTGTCTGAAGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFSGAPR*VSEDGG
Trigger: TCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCACGGGCTACTGTCTaGGGCTCCGAGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDARATV*GSEVGV
Trigger: GACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCGAGGGCGTGGGCGCTaGACACGTGGCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRRGRGR*TRGCLG
Trigger: CCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGGGCTCGTGCATGCTaGGACTGCGGCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRARAC*DCGLPV
Trigger: TACAGGGAGGCCGCAGTCCCAGCATGCACGAGCCCT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGCCGTCTCTGGGAGGTaGACAGGAGACTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCAVSGR*TGDSHK
Trigger: CTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGATTTCAGGTGGGTGTaGCTTGAAGAATCACGTGTG +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHDFRWV*LEESRV
Trigger: CACACGTGATTCTTCAAGCCACACCCACCTGAAATC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCAGACTAGGGAAAGGGTaGCAGGGCAAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFRLGKG*QGKGSH
Trigger: GTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGTCT...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGACTAGGGAAAGGGTaGCAGGGCAAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCRLGKG*QGKGSH
Trigger: GTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGTCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACAGCTCAGCAGGTCCGTaGACTGATACAGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHSSAGP*TDTVLI
Trigger: AATCAACACTGTATCAGTCCACGGACCTGCTGAGCT...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCAGGGCATGGCAAGTTaGGGGAGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFQGMAS*GSPQGS
Trigger: TGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCGGCGCCCTGTGAGGTaGCCTGGGCTCTCGGGCATG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSRRPVR*PGLSGM
Trigger: CATGCCCGAGAGCCCAGGTCACCTCACAGGGCGCCG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTCCGAGGTGGGTGTCTaGAGATGGGGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDSEVGV*RWGTGS
Trigger: AGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGGAGGTTTGGCGCTCTaGGGGCACGCACGGGCTACT +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKGGLAL*GHARAT
Trigger: AGTAGCCCGTGCGTGCCCTCAGAGCGCCAAACCTCC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCCTGTGCGCAGACCTaGCTTAGAACCGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDACAQT*LRTAGR
Trigger: CCTCCCAGCGGTTCTAAGTCAGGTCTGCGCACAGGC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGATCCCCTGCTCGACTaGGGCGGGTGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSDPLLD*GGCLPG
Trigger: GCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGATCACGGTCACGGCTaGGGTGGGGATCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRDHGHG*GGDPLL
Trigger: GAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCGCCCATCTACTTCTaGATGGGCACGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDAPIYF*MGTRQP
Trigger: CGGCTGCCTCGTGCCCATGCAGAAGTAGATGGGCGC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGTAGTCGGCGGGGTTaGCAGGCATCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRCSRRG*QASAAA
Trigger: CGCCGCTGCCGATGCCTGGCAACCCCGCCGACTACA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCCCCTCCTCGTGAGGTaGAGCCACTGGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDPLLVR*SHWGQL
Trigger: AAGCTGTCCCCAGTGGCTGCACCTCACGAGGAGGGG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGAGCCCCAGGGAGGGTaGTGGAAAGGGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTEPQGG*WKGVPE
Trigger: CTCAGGCACCCCTTTCCAGCACCCTCCCTGGGGCTC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGAGCCCCAGGGAGGGTaGTGGAAAGGGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKEPQGG*WKGVPE
Trigger: CTCAGGCACCCCTTTCCAGCACCCTCCCTGGGGCTC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAATGGGGGACGGGCTCTaGTGCAGGTGGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTMGDGL*CRWHTG
Trigger: CCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCAT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTTGCTCCTTGCAGTGTaGCTGCAGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFLLLAV*LQLEPV
Trigger: CACAGGCTCCAGCTGCAGGCACACTGCAAGGAGCAA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCGCTGGACACGTGGCTaGTTGGGGTGGCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRRWTRG*LGWLGL
Trigger: CAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCGTGCATGCTGGGACTaGGGCCTCCCTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRACWD*GLPVSA
Trigger: AGCACTTACAGGGAGGCCGCAGTCCCAGCATGCACG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTGCCCCCAGGGGTATaGCCTTGTGGAAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMLPPGV*PCGSAQ
Trigger: CTGAGCACTTCCACAAGGGCATACCCCTGGGGGCAG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGGGAAGACCCAGGGCTaGAGTTCTCAGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKGKTQG*SSQPQP
Trigger: GGGCTGGGGCTGAGAACTGCAGCCCTGGGTCTTCCC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCTTCATTCTCGTGCATaGTGGGACTGCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFLHSRA*WDCGLP
Trigger: AGGGAGGCCGCAGTCCCAGCATGCACGAGAATGAAG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGGCCCGAACTCAGCATaGGAAGGGACTTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCGPNSA*EGTFSE
Trigger: CTCGGAGAAAGTCCCTTCCCATGCTGAGTTCGGGCC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGCTCTCGGGCATGCCTaGCTCCACACCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTALGHA*LHTLNP
Trigger: GGGGTTGAGGGTGTGGAGCCAGGCATGCCCGAGAGC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACCCTGTGAGGTGACCTaGGCTCTCGGGCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTPCEVT*ALGHAW
Trigger: CCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGCCGGGGCCGCTTCTTaGAGGAGGACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVAGAAS*RRTSPQ
Trigger: CTGGGGGCTGGTCCTCCTCCAAGAAGCGGCCCCGGC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGCCGGGGCCGCTTCTTaGAGGAGGACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSAGAAS*RRTSPQ
Trigger: CTGGGGGCTGGTCCTCCTCCAAGAAGCGGCCCCGGC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGATCGGGTGCTGGCTCTaGAGACAGGTCCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGIGCWL*RQVPTS
Trigger: GGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGAT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGACCTTCATCGGGTGCTaGCTCTGGAGACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMTFIGC*LWRQVP
Trigger: CGGGACCTGTCTCCAGAGCCAGCACCCGATGAAGGT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCCATCTACTTCTGCATaGGCACGAGGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMPSTSA*ARGSRR
Trigger: CCTGCGGCTGCCTCGTGCCCATGCAGAAGTAGATGG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGTGCTGGGGGCTCAGTaGAGCGCCCATCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMVLGAQ*SAHLLL
Trigger: CAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCAC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCAGGGGCTGATGAGATaGCTGGACGGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMQGLMR*LDGWPT
Trigger: TGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCAGGGGCTGATGAGATaGCTGGACGGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGQGLMR*LDGWPT
Trigger: TGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGCAGGTGGCACACTaGGTACAGGGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLQVAH*VQGTPG
Trigger: TCCTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCGAGGGCGTGGGCGCTaGACACGTGGCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVRGRGR*TRGCLG
Trigger: CCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCTCGGCGCTTGGCCATaGCACAGAACCTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCLGAWP*HRTCST
Trigger: AGTACTGCAGGTTCTGTGCCATGGCCAAGCGCCGAG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTTGCGGTGGGGTGGGGTaGAATAGTCTGCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVCGGVG*NSLQRG
Trigger: CCCCCTCTGCAGACTATTCCACCCCACCCCACCGCA...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCAAGACCCTACCTCCTaGGAGGAGGGCCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCQDPTS*EEGLHL
Trigger: GAGATGAAGGCCCTCCTCCCAGGAGGTAGGGTCTTG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGCCTGTGCGCAGACCTaGCTTAGAACCGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKACAQT*LRTAGR
Trigger: CCTCCCAGCGGTTCTAAGTCAGGTCTGCGCACAGGC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGCCTGTGCGCAGACCTaGCTTAGAACCGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTACAQT*LRTAGR
Trigger: CCTCCCAGCGGTTCTAAGTCAGGTCTGCGCACAGGC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGTTCGTGGGCCTGATTTaGGAAGGACGGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMFVGLI*EGRCPG
Trigger: TCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAA...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCATCATCAGCTCTCCTaGCTCGGGGTTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMHHQLS*LGVLPE
Trigger: CTCTGGGAGAACCCCGAGTCAGGAGAGCTGATGATG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLWGAA*GENRAS
Trigger: AGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGAGCAAGGGCCCAGAATaGGCAGGCTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSKGPE*AGSKAG
Trigger: GCCAGCCTTGGAGCCTGCTCATTCTGGGCCCTTGCT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCACACCCTCAACCCCCTaGTCCATGTTGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCTPSTP*SMLLSS
Trigger: GGAAGACAGCAACATGGAGCAGGGGGTTGAGGGTGT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACTGGGCTCTCGGGCATaGCTGGCTCCACACCCTCAA +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKLGSRA*LAPHPQ
Trigger: TTGAGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTACTGCGGCGGGTGCCTaGCAGGCTGCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVTAAGA*QAAGVL
Trigger: GAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCTCGACTGCGGCGGGTaGCTGCCAGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSLDCGG*LPGCWC
Trigger: ACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGCGCCCATCTACTTCTaGATGGGCACGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRAPIYF*MGTRQP
Trigger: CGGCTGCCTCGTGCCCATGCAGAAGTAGATGGGCGC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTTGTAGTCGGCGGGGTTaGCAGGCATCGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVCSRRG*QASAAA
Trigger: CGCCGCTGCCGATGCCTGGCAACCCCGCCGACTACA...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGGTGCTGGAAAGGGGTaGCTGAGGGCACTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRGAGKG*LRALSS
Trigger: CGAGCTCAGTGCCCTCAGGCACCCCTTTCCAGCACC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCACTGGCCCAGGGATCTaGAGCCTTCTGCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCTGPGI*SLLLQK
Trigger: CTTTTGCAGCAGAAGGCTGCAGATCCCTGGGCCAGT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000560846.1
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTTCCTTGCAGTGTGCCTaGAGCTGGAGCCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVSLQCA*SWSLCA
Trigger: TGCGCACAGGCTCCAGCTGCAGGCACACTGCAAGGA...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTTTCTGCAAGGGCTCGTaGATGCTGGGACTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVFCKGS*MLGLRP
Trigger: AGGCCGCAGTCCCAGCATGCACGAGCCCTTGCAGAA...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCTGTCCTCACCCAGTaGCACCTCCTAAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVAVLTQ*HLLSLL
Trigger: CAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCTCCAAGGCTGGCTCTaGAGAGCCCCCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRLQGWL*RAPTAT
Trigger: AGTGGCAGTGGGGGCTCTGCAGAGCCAGCCTTGGAG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTCACCCCCACAGACGTaGCCTCCCAAGCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRSPPQT*PPKPEH
Trigger: GTGCTCGGGCTTGGGAGGGCACGTCTGTGGGGGTGA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCCCCTAGTCACCAAATaGTGTGGCTCCGTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFPLVTK*CGSVSH
Trigger: GTGAGAGACGGAGCCACAGCATTTGGTGACTAGGGG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAATGCCTGCCAGGCTGCTaGTGTCCTCTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKCLPGC*CPLAPA
Trigger: TGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCA...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACCTTGGGCCACTTTaGCCTCGGGGCCTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRDLGPL*PRGLGC
Trigger: GCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGTGAGGTGCAGCCACTaGGGACAGCTTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKVRCSH*GQLALR
Trigger: CCTGAGGGCAAGCTGTCCCCAGTGGCTGCACCTCAC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGGGCTCTGCTGCAGGTaGCACACTGGGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKGLCCR*HTGYRA
Trigger: TGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTCTGGGGCTCCGAGGTaGGTGTCTGAAGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDSGAPR*VSEDGG
Trigger: TCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTTCTGGGGCTCCGAGGTaGGTGTCTGAAGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVSGAPR*VSEDGG
Trigger: TCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGA...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGCACGGGCTACTGTCTaGGGCTCCGAGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRARATV*GSEVGV
Trigger: GACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAAACCGCTGGGAGGTTTaGCGCTCTGAGGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKNRWEV*RSEGTH
Trigger: GTGCGTGCCCTCAGAGCGCCAAACCTCCCAGCGGTT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAAGGGCTCGTGCATGCTaGGACTGCGGCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTRARAC*DCGLPV
Trigger: TACAGGGAGGCCGCAGTCCCAGCATGCACGAGCCCT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCTCGGCGCTTGGCCATaGCACAGAACCTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGLGAWP*HRTCST
Trigger: AGTACTGCAGGTTCTGTGCCATGGCCAAGCGCCGAG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCTTCACCTCGGCGCTTaGCCATGGCACAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDLHLGA*PWHRTC
Trigger: GCAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTTCACCTCGGCGCTTaGCCATGGCACAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLHLGA*PWHRTC
Trigger: GCAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGTGCTGTCTTTCGGCTaGGGAGGCCTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRVLSFG*GGLHLG
Trigger: GCCGAGGTGAAGGCCTCCCCAGCCGAAAGACAGCAC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGAGACTCCCACAAGTaGGCCACACCCATGACTGTG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMGDSHK*ATPMTV
Trigger: CACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGAAGCCAGACCCGCTaGGTGGCCGTCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGSQTR*VAVSGR
Trigger: CCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCAGGGGTATGCCCTTGTaGAAGTGCTCAGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFRGMPL*KCSASR
Trigger: CCTGCTAGCTGAGCACTTCCACAAGGGCATACCCCT...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCAGGGCATGGCAAGTTaGGGGAGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVQGMAS*GSPQGS
Trigger: TGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGAGCAGGCTCCAAGGCTaGCTCTGCAGAGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSRLQG*LCRAPT
Trigger: AGTGGGGGCTCTGCAGAGCCAGCCTTGGAGCCTGCT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGTGTGTCTTGGGCACCTaGTGGTGCCAGAGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRCVLGT*WCQSPP
Trigger: AGGCGGGCTCTGGCACCACCAGGTGCCCAAGACACA...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561234.5
3UTR CAA 72 bp GTGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTaGTCCCAGCACCAGTTGCTACTGCAGGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VGHTHDCERWVN*SQHQLLLQGKG
Trigger: TCCTTTGCCCTGCAGTAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGATAGTTCTTGCCATTaGCCTTGGGCCACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFDSSCH*PWATLA
Trigger: GGCCAAAGTGGCCCAAGGTCAATGGCAAGAACTATC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGTGGGGAAAGAGGGCTaGTGCAGTTCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDVGKEG*CSSCLG
Trigger: CCCTAAGCAGGAACTGCATCAGCCCTCTTTCCCCAC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTCCGAGGTGGGTGTCTaGAGATGGGGGACGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRSEVGV*RWGTGS
Trigger: AGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAAGCCTGGTCCCAGGCTaGAGGGGAAGCGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQSLVPG*RGSGGS
Trigger: TGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAATCCTTTCCTGCTAGGTaGGGCTGGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKSFPAR*GWAPWQ
Trigger: CTGCCAAGGAGCCCAGCCTCACCTAGCAGGAAAGGA...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGGGACCTTCATCGGGTaGTGGCTCTGGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKGTFIG*WLWRQV
Trigger: GACCTGTCTCCAGAGCCAGCACCCGATGAAGGTCCC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTGGCCCACAAGGAGTTaGAGATGGCCATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFWPTRS*RWPWFI
Trigger: GATGAACCATGGCCATCTGCAACTCCTTGTGGGCCA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGGGGACGGGCTCTGCTaGAGGTGGCACACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSGDGLC*RWHTGY
Trigger: GTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATCCTTGCAGTGTGCCTaGAGCTGGAGCCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSLQCA*SWSLCA
Trigger: TGCGCACAGGCTCCAGCTGCAGGCACACTGCAAGGA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTTGCTCCTTGCAGTGTaGCTGCAGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDLLLAV*LQLEPV
Trigger: CACAGGCTCCAGCTGCAGGCACACTGCAAGGAGCAA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACGTGCATGCTGGGACTaGGGCCTCCCTGTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKRACWD*GLPVSA
Trigger: AGCACTTACAGGGAGGCCGCAGTCCCAGCATGCACG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAAGGCCCAAGCCACACTaGACTCCACTCCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTRPKPH*TPLPLP
Trigger: TGGGAGAGGGAGTGGAGTGCAGTGTGGCTTGGGCCT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGGCCCGAACTCAGCATaGGAAGGGACTTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVGPNSA*EGTFSE
Trigger: CTCGGAGAAAGTCCCTTCCCATGCTGAGTTCGGGCC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACGCCGCTTGCGGGGCTaGGCAAGGCCAGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQRRLRG*ARPGSS
Trigger: TGAAGACCCTGGCCTTGCCCAGCCCCGCAAGCGGCG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGCCTGCCAGGCTGCTaGTGTCCTCTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRCLPGC*CPLAPA
Trigger: TGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGCCGGGGCCGCTTCTTaGAGGAGGACCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIAGAAS*RRTSPQ
Trigger: CTGGGGGCTGGTCCTCCTCCAAGAAGCGGCCCCGGC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCGGTAGCTCCCGCTCCTaGCTCAGTTTTAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCGSSRS*LSFRKA
Trigger: TGCTTTCCTAAAACTGAGCCAGGAGCGGGAGCTACC...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCCATCTACTTCTGCATaGGCACGAGGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRPSTSA*ARGSRR
Trigger: CCTGCGGCTGCCTCGTGCCCATGCAGAAGTAGATGG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGATGGCTGGACGGATaGCCCACAAGGAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRWLDG*PTRSCR
Trigger: TCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACCCCAGGGAGGGTGCTaGAAAGGGGTGCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQPQGGC*KGVPEG
Trigger: GCCCTCAGGCACCCCTTTCCAGCACCCTCCCTGGGG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCAGGTAGTGCCAGCGTaGGTAACAGACAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDQVVPA*VTDRGN
Trigger: GTTGCCCCTGTCTGTTACCCACGCTGGCACTACCTG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGAGGAAATTCCAACTaGCCCAGGGATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCRGNSN*PRDLQP
Trigger: AGGCTGCAGATCCCTGGGCCAGTTGGAATTTCCTCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTGCAGGTGGCACACTaGGTACAGGGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLQVAH*VQGTPG
Trigger: TCCTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGCACGGGCTACTGTCTaGGGCTCCGAGGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSARATV*GSEVGV
Trigger: GACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCACTGTGCGGTGGGGTaGGGTGGAATAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDHCAVG*GGIVCR
Trigger: TCTGCAGACTATTCCACCCCACCCCACCGCACAGTG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCTGGAAGCCAGACTCTaGCTCTCTATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFLEARL*LSMPQR
Trigger: CCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGGAGACTCCCACAAGTaGGCCACACCCATGACTGTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVGDSHK*ATPMTV
Trigger: CACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAGCCGTCTCTGGGAGGTaGACAGGAGACTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKAVSGR*TGDSHK
Trigger: CTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGC...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGGGGTATGCCCTTGTaGAAGTGCTCAGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRGMPL*KCSASR
Trigger: CCTGCTAGCTGAGCACTTCCACAAGGGCATACCCCT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGTTCGTGGGCCTGATTTaGGAAGGACGGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRFVGLI*EGRCPG
Trigger: TCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAA...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAAGCCTGGTCCCAGGCTaGAGGGGAAGCGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLISLVPG*RGSGGS
Trigger: TGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCAGCAGGTCCGTGGACTaGTACAGTGTTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCSRSVD*YSVDSC
Trigger: GCAAGAATCAACACTGTATCAGTCCACGGACCTGCT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGTCAAAAGGGAGGTaGGGAAAGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLSKGR*GKVLPP
Trigger: GGGAGGAAGGACCTTTCCTCACCTCCCTTTTGACAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGAGTCAGCAGCACTTTaGAGGCCTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVESAAL*RPWASQ
Trigger: CTGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAACTGCGGCGGGTGCCTaGCAGGCTGCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLITAAGA*QAAGVL
Trigger: GAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCCCCTCCTCGTGAGGTaGAGCCACTGGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSPLLVR*SHWGQL
Trigger: AAGCTGTCCCCAGTGGCTGCACCTCACGAGGAGGGG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGGGGACGGGCTCTGCTaGAGGTGGCACACTGGGTAC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQGDGLC*RWHTGY
Trigger: GTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGCCTGCGGGCAGCCTTaGTCCTTGCAGTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQACGQP*SLQCAC
Trigger: GCAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGTTCCTGAAAGACCTTaGCCCTCCTTCCCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRVPERP*PSFPPP
Trigger: TGGGGGCGGGAAGGAGGGGCAAGGTCTTTCAGGAAC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCCTGCTGGGTTCATCTaGCCTTCCTCCCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDPAGFI*PSSLRE
Trigger: TTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGCTGTCCTCACCCAGTaGCACCTCCTAAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRAVLTQ*HLLSLL
Trigger: CAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACCCCCACTGCCACTCTaGCAACCTCATTTACTGCCC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKPPLPL*QPHLLP
Trigger: GGGCAGTAAATGAGGTTGGCAGAGTGGCAGTGGGGG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCTCCAAGGCTGGCTCTaGAGAGCCCCCACTGCCACT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSLQGWL*RAPTAT
Trigger: AGTGGCAGTGGGGGCTCTGCAGAGCCAGCCTTGGAG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGGTAGCTCCCGCTCCTaGCTCAGTTTTAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGGSSRS*LSFRKA
Trigger: TGCTTTCCTAAAACTGAGCCAGGAGCGGGAGCTACC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGCGACAGCTGAGGTGTaGGGAAAGAGGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRATAEV*GKRADA
Trigger: TGCATCAGCCCTCTTTCCCCACACCTCAGCTGTCGC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGCGACAGCTGAGGTGTaGGGAAAGAGGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTATAEV*GKRADA
Trigger: TGCATCAGCCCTCTTTCCCCACACCTCAGCTGTCGC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATACCCCAGGGAGGGTGCTaGAAAGGGGTGCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIPQGGC*KGVPEG
Trigger: GCCCTCAGGCACCCCTTTCCAGCACCCTCCCTGGGG...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACAGGTAGTGCCAGCGTaGGTAACAGACAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKQVVPA*VTDRGN
Trigger: GTTGCCCCTGTCTGTTACCCACGCTGGCACTACCTG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGAGAGGAAATTCCAACTaGCCCAGGGATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMRGNSN*PRDLQP
Trigger: AGGCTGCAGATCCCTGGGCCAGTTGGAATTTCCTCT...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGCTCTTTCGGATGGCTaGCTCCGGCTCATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRALSDG*LRLIQD
Trigger: GTCTTGGATGAGCCGGAGCCAGCCATCCGAAAGAGC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGGTAGCTCTTTCGGATaGCTGGCTCCGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRGSSFG*LAPAHP
Trigger: TGGATGAGCCGGAGCCAGCCATCCGAAAGAGCTACC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTTCACCTCGGCGCTTaGCCATGGCACAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLHLGA*PWHRTC
Trigger: GCAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTTGCGGTGGGGTGGGGTaGAATAGTCTGCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVCGGVG*NSLQRG
Trigger: CCCCCTCTGCAGACTATTCCACCCCACCCCACCGCA...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCACTGTGCGGTGGGGTaGGGTGGAATAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRHCAVG*GGIVCR
Trigger: TCTGCAGACTATTCCACCCCACCCCACCGCACAGTG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVLGGRL*EVDRRL
Trigger: GAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGHQLTF*EARPAG
Trigger: CCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCATCAGTTAACTTTCTaGGAAGCCAGACCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMHQLTF*EARPAG
Trigger: CCCAGCGGGTCTGGCTTCCCAGAAAGTTAACTGATG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATAGGGGTATGCCCTTGTaGAAGTGCTCAGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRGMPL*KCSASR
Trigger: CCTGCTAGCTGAGCACTTCCACAAGGGCATACCCCT...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAGCAGGCTCCAAGGCTaGCTCTGCAGAGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVSRLQG*LCRAPT
Trigger: AGTGGGGGCTCTGCAGAGCCAGCCTTGGAGCCTGCT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGAAGGAGCTGTGTCTTaGGCACCTGGTGGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTEGAVS*APGGAR
Trigger: TCTGGCACCACCAGGTGCCCAAGACACAGCTCCTTC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561234.5
3UTR CAA 72 bp GTGGCAGGGCAAGGGGAGCCACAGCACTCCTTTGGTTaGATTTCAGGTGGGTGTGGCTTGAAGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: VAGQGEPQHSFG*ISGGCGLKNHV
Trigger: CACGTGATTCTTCAAGCCACACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGCTCCCCTTGCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGTGGGGAAAGAGGGCTaGTGCAGTTCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRVGKEG*CSSCLG
Trigger: CCCTAAGCAGGAACTGCATCAGCCCTCTTTCCCCAC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGGTCTTTCGTGGGCCTaGTTTGAGAAGGACGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRGLSWA*FEKDGV
Trigger: GACACCGTCCTTCTCAAATCAGGCCCACGAAAGACC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSLWGAA*GENRAS
Trigger: AGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTCCTTTCCTGCTAGGTaGGGCTGGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSSFPAR*GWAPWQ
Trigger: CTGCCAAGGAGCCCAGCCTCACCTAGCAGGAAAGGA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTTTGCTGTCTTCCATCTaGAGGGGCTCTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVLLSSI*RGSRRP
Trigger: TGGCCGCCGAGAGCCCCTGCAGATGGAAGACAGCAA...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTTGCTGTCTTCCATCTaGAGGGGCTCTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSLLSSI*RGSRRP
Trigger: TGGCCGCCGAGAGCCCCTGCAGATGGAAGACAGCAA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGAGTCAGCAGCACTTTaGAGGCCTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTESAAL*RPWASQ
Trigger: CTGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGAGCCCCAGGGAGGGTaGTGGAAAGGGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIEPQGG*WKGVPE
Trigger: CTCAGGCACCCCTTTCCAGCACCCTCCCTGGGGCTC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGACTGGCCCAGGGATCTaGAGCCTTCTGCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRTGPGI*SLLLQK
Trigger: CTTTTGCAGCAGAAGGCTGCAGATCCCTGGGCCAGT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000560846.1
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGCAGCCTTGCTCCTTaGAGTGTGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGSLAP*SVPAAG
Trigger: TCCAGCTGCAGGCACACTGCAAGGAGCAAGGCTGCC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGGCAGCCTTGCTCCTTaGAGTGTGCCTGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSGSLAP*SVPAAG
Trigger: TCCAGCTGCAGGCACACTGCAAGGAGCAAGGCTGCC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCCATGGCACAGAACCTaGAGTACTCGGCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGPWHRT*STRQKS
Trigger: TGACTTTTGCCGAGTACTGCAGGTTCTGTGCCATGG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCCTAACCAAGTGCTGTaGTTCAAGCAGTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDPNQVL*FKQCPL
Trigger: TAGGGGGCACTGCTTGAAGCACAGCACTTGGTTAGG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFSRVKF*KRFPGT
Trigger: GGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTATGCCCTTGTGGAAGTaGTCAGCTAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVMPLWK*SASRFP
Trigger: TGGGAACCTGCTAGCTGAGCACTTCCACAAGGGCAT...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGCTGTCCTCACCCAGTaGCACCTCCTAAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVAVLTQ*HLLSLL
Trigger: CAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCCAACCTCATTTACTaGCCCATCCTCCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVANLIY*PILPDR
Trigger: TCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCTTCTCAGGAACCAATaGGCGCTTACGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGLLRNQ*ALTKWV
Trigger: TACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTCTCAGGAACCAATaGGCGCTTACGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMLLRNQ*ALTKWV
Trigger: TACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCACCTTCATCGGGTGCTaGCTCTGGAGACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSTFIGC*LWRQVP
Trigger: CGGGACCTGTCTCCAGAGCCAGCACCCGATGAAGGT...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTACCTTCATCGGGTGCTaGCTCTGGAGACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVTFIGC*LWRQVP
Trigger: CGGGACCTGTCTCCAGAGCCAGCACCCGATGAAGGT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATAGTTGCAGATGGCCATaGTTCATCAGGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDSCRWP*FIRAAL
Trigger: CAAGGCTGCCCTGATGAACCATGGCCATCTGCAACT...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGACAAGGAGTTGCAGATaGCCATGGTTCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGTRSCR*PWFIRA
Trigger: TGCCCTGATGAACCATGGCCATCTGCAACTCCTTGT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCAGGGGCTGATGAGATaGCTGGACGGATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSQGLMR*LDGWPT
Trigger: TGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCAGGTAGTGCCAGCGTaGGTAACAGACAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRQVVPA*VTDRGN
Trigger: GTTGCCCCTGTCTGTTACCCACGCTGGCACTACCTG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTCGGCGCTTGGCCATaGCACAGAACCTGCAGTACT +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLGAWP*HRTCST
Trigger: AGTACTGCAGGTTCTGTGCCATGGCCAAGCGCCGAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVKLRPL*PPNQVL
Trigger: CAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTT...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCTGGAAGCCAGACTCTaGCTCTCTATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDLEARL*LSMPQR
Trigger: CCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACTGGGTGGCCGTCTCTaGGAGGTGGACAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQLGGRL*EVDRRL
Trigger: GAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCAGCTCAGCAGGTCCGTaGACTGATACAGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFSSAGP*TDTVLI
Trigger: AATCAACACTGTATCAGTCCACGGACCTGCTGAGCT...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGAGTACTTCCAACCTaGCTTCCCCCTAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGVLPT*LPPSHQ
Trigger: TTGGTGACTAGGGGGAAGCCAGGTTGGAAGTACTCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGTCCGAGTGTGTGTCATaGAGTACTTCCAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMSECVS*STSNLA
Trigger: AGCCAGGTTGGAAGTACTCCATGACACACACTCGGA...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGATAGTTCTTGCCATTaGCCTTGGGCCACTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTDSSCH*PWATLA
Trigger: GGCCAAAGTGGCCCAAGGTCAATGGCAAGAACTATC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGTGGGGAAAGAGGGCTaGTGCAGTTCCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVVGKEG*CSSCLG
Trigger: CCCTAAGCAGGAACTGCATCAGCCCTCTTTCCCCAC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTTCGTGGGCCTGATTTaGGAAGGACGGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSFVGLI*EGRCPG
Trigger: TCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTACACTGTTCTGGTCCTaGTGTCGCGATGCAAACACT +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVTLFWS*CRDANT
Trigger: AGTGTTTGCATCGCGACATCAGGACCAGAACAGTGT...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTCACCCAAACCCAATaGCCAATCAGGAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLTQTQ*PIRSNS
Trigger: TGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAG...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACCTCGGGGCCTTGGGTaGTGGGGGCTCAGTGGAGCG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVPRGLG*WGLSGA
Trigger: CGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGCAACACTCCGCAGATaGTGTAGCCATTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTATLRR*CSHSLQ
Trigger: CTGGAGTGAATGGCTACAGCATCTGCGGAGTGTTGC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTCTGCAGCCTTCTGCTaGAAAAGGCATTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFSAAFC*KRHFVW
Trigger: CCATACAAAATGCCTTTTGCAGCAGAAGGCTGCAGA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000560846.1
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATTCTGCAAGGGCTCGTaGATGCTGGGACTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQFCKGS*MLGLRP
Trigger: AGGCCGCAGTCCCAGCATGCACGAGCCCTTGCAGAA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCAAACACTTCATTCTaGAAGGGCTCGTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVANTSF*KGSCML
Trigger: CAGCATGCACGAGCCCTTGCAGAATGAAGTGTTTGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGCCCCCTAACCAAGTaGTGTGCTTCAAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGPLTK*CASSSA
Trigger: GGCACTGCTTGAAGCACAGCACTTGGTTAGGGGGCC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGACTCTGGCTCTCTATaGCTCAAAGGAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMDSGSL*LKGTSS
Trigger: TGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGACTCTGGCTCTCTATaGCTCAAAGGAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGDSGSL*LKGTSS
Trigger: TGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGTCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGSRVKF*KRFPGT
Trigger: GGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGA...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAATGCCCTTGTGGAAGTaGTCAGCTAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTMPLWK*SASRFP
Trigger: TGGGAACCTGCTAGCTGAGCACTTCCACAAGGGCAT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCCTGCTGGGTTCATCTaGCCTTCCTCCCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRPAGFI*PSSLRE
Trigger: TTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCCCCCACTGCCACTCTaGCAACCTCATTTACTGCCC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVPPLPL*QPHLLP
Trigger: GGGCAGTAAATGAGGTTGGCAGAGTGGCAGTGGGGG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATATTGGGCACCTGGTGGTaGCAGAGCCCGCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLILGTWW*QSPPRT
Trigger: AGTCCTAGGCGGGCTCTGGCACCACCAGGTGCCCAA...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCAGGGATCTGCAGCCTaGTGCAAAAGGCATTTTGTA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGQGSAA*CKRHFV
Trigger: TACAAAATGCCTTTTGCAGCAGGCTGCAGATCCCTG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTGGGCGCTTACGAAGTaGGTAATTCTTGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSWALTK*VILAAP
Trigger: GGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTTGGGCGCTTACGAAGTaGGTAATTCTTGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVWALTK*VILAAP
Trigger: GGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCA...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATATGCCTGCCAGGCTGCTaGTGTCCTCTCGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLICLPGC*CPLAPA
Trigger: TGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCA...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATACAGTCTCTTGGGAGCTaGGTCTCCATCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIQSLGS*VSISAG
Trigger: CCCCGCCGAGATGGAGACCCAGCTCCCAAGAGACTG...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGAGTTGCAGATGGCCATaGTTCATCAGGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRSCRWP*FIRAAL
Trigger: CAAGGCTGCCCTGATGAACCATGGCCATCTGCAACT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGAAAAGGCATTTTGTATaGGCAGCCGCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGKRHFV*AAATGS
Trigger: ACTACCTGTGGCGGCTGCCCATACAAAATGCCTTTT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAAACCGCTGGGAGGTTTaGCGCTCTGAGGGCACGCAC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLINRWEV*RSEGTH
Trigger: GTGCGTGCCCTCAGAGCGCCAAACCTCCCAGCGGTT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGGCCACATAAGGTGTaGAGGTCTTTCGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRWPHKV*RSFVGL
Trigger: CAGGCCCACGAAAGACCTCCACACCTTATGTGGCCA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCACTGTGCGGTGGGGTaGGGTGGAATAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSHCAVG*GGIVCR
Trigger: TCTGCAGACTATTCCACCCCACCCCACCGCACAGTG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTACAGAAGGGCCTGTTaGGTCTGGTTCCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDYRRAC*VWFLKD
Trigger: GTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGCCACAGCACTCCTTTaGTTTGATTTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVATALL*FDFRWV
Trigger: CACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGCCTTCCCTTCAGGTTTaGGATCAGGCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRPSLQV*DQASQA
Trigger: TGCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGG...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGAGTCACCAAATGCTGTaGCTCCGTCTCTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRSHQML*LRLSPP
Trigger: TGGGGGTGAGAGACGGAGCCACAGCATTTGGTGACT...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCATTCTCGTGCATGCTaGGACTGCGGCCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVHSRAC*DCGLPV
Trigger: TACAGGGAGGCCGCAGTCCCAGCATGCACGAGAATG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAACACTGTTCTGGTCCTaGTGTCGCGATGCAAACACT +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTTLFWS*CRDANT
Trigger: AGTGTTTGCATCGCGACATCAGGACCAGAACAGTGT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACAGGTGGGTGTGGCTTaGAGAATCACGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTQVGVA*RITCEV
Trigger: AACTTCACACGTGATTCTTCAAGCCACACCCACCTG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATACTCTGGGGAGCAGCATaGGGTGAGAACAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLILWGAA*GENRAS
Trigger: AGAGGCCCTGTTCTCACCTCATGCTGCTCCCCAGAG...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCTGTCAAAAGGGAGGTaGGGAAAGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVLSKGR*GKVLPP
Trigger: GGGAGGAAGGACCTTTCCTCACCTCCCTTTTGACAG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGAGTCAGCAGCACTTTaGAGGCCTTGGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVESAAL*RPWASQ
Trigger: CTGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGGCCCACAAGGAGTTaGAGATGGCCATGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRWPTRS*RWPWFI
Trigger: GATGAACCATGGCCATCTGCAACTCCTTGTGGGCCA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGTCTGCAGCCTTCTGCTaGAAAAGGCATTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMSAAFC*KRHFVW
Trigger: CCATACAAAATGCCTTTTGCAGCAGAAGGCTGCAGA...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000560846.1
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATATCCTTGCAGTGTGCCTaGAGCTGGAGCCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLISLQCA*SWSLCA
Trigger: TGCGCACAGGCTCCAGCTGCAGGCACACTGCAAGGA...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATTGCTCCTTGCAGTGTaGCTGCAGCTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQLLLAV*LQLEPV
Trigger: CACAGGCTCCAGCTGCAGGCACACTGCAAGGAGCAA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGCAAACACTTCATTCTaGAAGGGCTCGTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRANTSF*KGSCML
Trigger: CAGCATGCACGAGCCCTTGCAGAATGAAGTGTTTGC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGVLMSR*KHFILQ
Trigger: TTGCAGAATGAAGTGTTTGCATCGCGACATCAGGAC...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGACAAGCTCAGAGCTGTaGTGGGATCTAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRTSSEL*WDLGKP
Trigger: AGGCTTTCCTAGATCCCAGCACAGCTCTGAGCTTGT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACCCCCACTGCCACTCTaGCAACCTCATTTACTGCCC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQPPLPL*QPHLLP
Trigger: GGGCAGTAAATGAGGTTGGCAGAGTGGCAGTGGGGG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGTGCTGGGGGCTCAGTaGAGCGCCCATCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIVLGAQ*SAHLLL
Trigger: CAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCAC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATTGGCCTCGGGGCCTTaGGTGCTGGGGGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVLASGP*VLGAQW
Trigger: CCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAAACAAGGAGTTGCAGATaGCCATGGTTCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKTRSCR*PWFIRA
Trigger: TGCCCTGATGAACCATGGCCATCTGCAACTCCTTGT...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGAGAGGAAATTCCAACTaGCCCAGGGATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRRGNSN*PRDLQP
Trigger: AGGCTGCAGATCCCTGGGCCAGTTGGAATTTCCTCT...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTGGCCACATAAGGTGTaGAGGTCTTTCGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSWPHKV*RSFVGL
Trigger: CAGGCCCACGAAAGACCTCCACACCTTATGTGGCCA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGCCGTCTCTGGGAGGTaGACAGGAGACTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIAVSGR*TGDSHK
Trigger: CTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGGGCACAGAGAGAGATaGGAAGTCCCTGTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSGHRER*EVPVRC
Trigger: GCACCTAACAGGGACTTCCCATCTCTCTCTGTGCCC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCTGCCAACCTCATTTACTGCCCCATCCTCCCAGACAGACACCTTCCTCCAAACTTCCCTCCCAGATATaGCAAACCCCACAATCATCA +
Preference number: 4 (lower is better)
Translates to: LCQPHLLPHPPRQTPSSKLPSQI*QTPQSS
Trigger: TGATGATTGTGGGGTTTGTCATATCTGGGAGGGAAG...TTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCAGGTGGGTGTGGCTTaGAGAATCACGTGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRQVGVA*RITCEV
Trigger: AACTTCACACGTGATTCTTCAAGCCACACCCACCTG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGGATTATGCTTCCATTaGAATTCTACCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFGLCFH*NSTSCI
Trigger: AATGCAGCTGGTAGAATTTCAATGGAAGCATAATCC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTCCCTTGTAAACACTaGAATACAGATCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMLPCKH*NTDLGN
Trigger: GTTTCCCAGATCTGTATTTCAGTGTTTACAAGGGAG...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCTCCCTTGTAAACACTaGAATACAGATCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QAWPSLREDYFSEISTQGLPCKH*NTDLGN
Trigger: GTTTCCCAGATCTGTATTTCAGTGTTTACAAGGGAG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGATCACGGTCACGGCTaGGGTGGGGATCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVDHGHG*GGDPLL
Trigger: GAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCCTGCGGGCAGCCTTaGTCCTTGCAGTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVACGQP*SLQCAC
Trigger: GCAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGGCCCCCTAACCAAGTaGTGTGCTTCAAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIGPLTK*CASSSA
Trigger: GGCACTGCTTGAAGCACAGCACTTGGTTAGGGGGCC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATCACGTGTGAAGTTCTaGAAGAGGTTTCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSRVKF*KRFPGT
Trigger: GGTTCCAGGAAACCTCTTGCAGAACTTCACACGTGA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGCCAACCTCATTTACTaGCCCATCCTCCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVANLIY*PILPDR
Trigger: TCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCTCTCGGGCATGCCTaGCTCCACACCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVALGHA*LHTLNP
Trigger: GGGGTTGAGGGTGTGGAGCCAGGCATGCCCGAGAGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACCCTGTGAGGTGACCTaGGCTCTCGGGCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVPCEVT*ALGHAW
Trigger: CCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGTAGCTCCCGCTCCTaGCTCAGTTTTAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGSSRS*LSFRKA
Trigger: TGCTTTCCTAAAACTGAGCCAGGAGCGGGAGCTACC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATGGGCGCTGGACACGTaGCTGCTTGGGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVWALDT*LLGVAR
Trigger: CCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGGTAGCTCTTTCGGATaGCTGGCTCCGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIGSSFG*LAPAHP
Trigger: TGGATGAGCCGGAGCCAGCCATCCGAAAGAGCTACC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATGGCCACATAAGGTGTaGAGGTCTTTCGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQWPHKV*RSFVGL
Trigger: CAGGCCCACGAAAGACCTCCACACCTTATGTGGCCA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAAGGGTCCGTGTCCTCTaGCACTGTGCGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVRVRVL*HCAVGW
Trigger: CCACCCCACCGCACAGTGCCAGAGGACACGGACCCT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTACAGAAGGGCCTGTTaGGTCTGGTTCCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRYRRAC*VWFLKD
Trigger: GTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAGCTCAGAGCTGTGCTaGGATCTAGGAAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVSSELC*DLGKPG
Trigger: ACCAGGCTTTCCTAGATCCCAGCACAGCTCTGAGCT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGATTTCAGGTGGGTGTaGCTTGAAGAATCACGTGTG +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRDFRWV*LEESRV
Trigger: CACACGTGATTCTTCAAGCCACACCCACCTGAAATC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGCCACAGCACTCCTTTaGTTTGATTTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRATALL*FDFRWV
Trigger: CACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAAGCTCAGCAGGTCCGTaGACTGATACAGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTSSAGP*TDTVLI
Trigger: AATCAACACTGTATCAGTCCACGGACCTGCTGAGCT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATACAAGACCCTACCTCCTaGGAGGAGGGCCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIQDPTS*EEGLHL
Trigger: GAGATGAAGGCCCTCCTCCCAGGAGGTAGGGTCTTG...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCACTGAAATACAGATCTaGGAAACCAGGATCAACACA +
Preference number: 4 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFTEIQI*ETRINT
Trigger: TGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGT...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGGTCTTTCGTGGGCCTaGTTTGAGAAGGACGGTGTC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIGLSWA*FEKDGV
Trigger: GACACCGTCCTTCTCAAATCAGGCCCACGAAAGACC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCACACTGTTCTGGTCCTaGTGTCGCGATGCAAACACT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSTLFWS*CRDANT
Trigger: AGTGTTTGCATCGCGACATCAGGACCAGAACAGTGT...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGTTGGGTCTGGTTCCTaGAAGACCTTGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIVGSGS*KTLPLL
Trigger: AAGGAGGGGCAAGGTCTTTCAGGAACCAGACCCAAC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGCTTCCCTCCCAGATATaGCAAACCCCACAATCATCA +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRLPSQI*QTPQSS
Trigger: TGATGATTGTGGGGTTTGTCATATCTGGGAGGGAAG...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTTTGAAGAATCACGTGTaGAGTTCTGCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVLKNHV*SSARGF
Trigger: GAAACCTCTTGCAGAACTTCACACGTGATTCTTCAA...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCAGCAGGTCCGTGGACTaGTACAGTGTTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSSRSVD*YSVDSC
Trigger: GCAAGAATCAACACTGTATCAGTCCACGGACCTGCT...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTAGCAGGTCCGTGGACTaGTACAGTGTTGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVSRSVD*YSVDSC
Trigger: GCAAGAATCAACACTGTATCAGTCCACGGACCTGCT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTCTCACCCAAACCCAATaGCCAATCAGGAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVLTQTQ*PIRSNS
Trigger: TGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAG...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGGATTATGCTTCCATTaGAATTCTACCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMGLCFH*NSTSCI
Trigger: AATGCAGCTGGTAGAATTTCAATGGAAGCATAATCC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGCAACACTCCGCAGATaGTGTAGCCATTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQATLRR*CSHSLQ
Trigger: CTGGAGTGAATGGCTACAGCATCTGCGGAGTGTTGC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRVLMSR*KHFILQ
Trigger: TTGCAGAATGAAGTGTTTGCATCGCGACATCAGGAC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCCCATGGCACAGAACCTaGAGTACTCGGCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSPWHRT*STRQKS
Trigger: TGACTTTTGCCGAGTACTGCAGGTTCTGTGCCATGG...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAATGCCCTTGTGGAAGTaGTCAGCTAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQMPLWK*SASRFP
Trigger: TGGGAACCTGCTAGCTGAGCACTTCCACAAGGGCAT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTCCGAGTGTGTGTCATaGAGTACTTCCAACCAGAAC +
Preference number: 4 (lower is better)
Translates to: LQASPKPNDQSGATHLLRSECVS*STSNQN
Trigger: GTTCTGGTTGGAAGTACTCCATGACACACACTCGGA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416165.6
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGTGAGGTGCAGCCACTaGGGACAGCTTGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVVRCSH*GQLALR
Trigger: CCTGAGGGCAAGCTGTCCCCAGTGGCTGCACCTCAC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACTGCAGGTGGCACACTaGGTACAGGGCACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVLQVAH*VQGTPG
Trigger: TCCTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAAAACTTAGGCCTCTGTaGCCCCCTAACCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQKLRPL*PPNQVL
Trigger: CAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACCTTCCCTTCAGGTTTaGGATCAGGCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQPSLQV*DQASQA
Trigger: TGCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATTGAAGAATCACGTGTaGAGTTCTGCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTLKNHV*SSARGF
Trigger: GAAACCTCTTGCAGAACTTCACACGTGATTCTTCAA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATCCTTTCCTGCTAGGTaGGGCTGGGCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVSFPAR*GWAPWQ
Trigger: CTGCCAAGGAGCCCAGCCTCACCTAGCAGGAAAGGA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATTGCTGTCTTCCATCTaGAGGGGCTCTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVLLSSI*RGSRRP
Trigger: TGGCCGCCGAGAGCCCCTGCAGATGGAAGACAGCAA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGGGACCTTCATCGGGTaGTGGCTCTGGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVGTFIG*WLWRQV
Trigger: GACCTGTCTCCAGAGCCAGCACCCGATGAAGGTCCC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGGATCTGCAGCCTGCTaGAAAAGGCATTTTGTATGG +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSGSAAC*KRHFVW
Trigger: CCATACAAAATGCCTTTTGCAGCAGGCTGCAGATCC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR GCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAAACACTTCATTCTCGTaGATGCTGGGACTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLINTSFS*MLGLRP
Trigger: AGGCCGCAGTCCCAGCATGCACGAGAATGAAGTGTT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAAGTTGCAGATGGCCATaGTTCATCAGGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLISCRWP*FIRAAL
Trigger: CAAGGCTGCCCTGATGAACCATGGCCATCTGCAACT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCAAAAGGCATTTTGTATaGGCAGCCGCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSKRHFV*AAATGS
Trigger: ACTACCTGTGGCGGCTGCCCATACAAAATGCCTTTT...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGATTTCAGGTGGGTGTaGCTTGAAGAATCACGTGTG +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVDFRWV*LEESRV
Trigger: CACACGTGATTCTTCAAGCCACACCCACCTGAAATC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACAGGGCATGGCAAGTTaGGGGAGCCCTCAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVQGMAS*GSPQGS
Trigger: TGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATACCTTCCCTTCAGGTTTaGGATCAGGCTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIPSLQV*DQASQA
Trigger: TGCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGG...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACATCATCAGCTCTCCTaGCTCGGGGTTCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVHHQLS*LGVLPE
Trigger: CTCTGGGAGAACCCCGAGTCAGGAGAGCTGATGATG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGACTCTGGCTCTCTATaGCTCAAAGGAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQDSGSL*LKGTSS
Trigger: TGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTCCTGATGTCGCGATaGAAACACTTCATTCTCGTG +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQVLMSR*KHFILV
Trigger: CACGAGAATGAAGTGTTTGCATCGCGACATCAGGAC...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGGCCCGAACTCAGCATaGGAAGGGACTTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVGPNSA*EGTFSE
Trigger: CTCGGAGAAAGTCCCTTCCCATGCTGAGTTCGGGCC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAAAAAGGCATTTTGTATaGGCAGCCGCCACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQKRHFV*AAATGS
Trigger: ACTACCTGTGGCGGCTGCCCATACAAAATGCCTTTT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCTCTTTCGGATGGCTaGCTCCGGCTCATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVALSDG*LRLIQD
Trigger: GTCTTGGATGAGCCGGAGCCAGCCATCCGAAAGAGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGGAGACTCCCACAAGTaGGCCACACCCATGACTGTG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVGDSHK*ATPMTV
Trigger: CACAGTCATGGGTGTGGCCCACTTGTGGGAGTCTCC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGCCACAGCACTCCTTTaGTTTGATTTCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIATALL*FDFRWV
Trigger: CACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAACACCCTCAACCCCCTaGTCCATGTTGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVTPSTP*SMLLSS
Trigger: GGAAGACAGCAACATGGAGCAGGGGGTTGAGGGTGT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAAGATGGCTGGACGGATaGCCCACAAGGAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVRWLDG*PTRSCR
Trigger: TCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCGGACTGATACAGTGTTaGTTCTTGCTAGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSGLIQC*FLLGCK
Trigger: TTTACATCCTAGCAAGAATCAACACTGTATCAGTCC...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACTCCCTTGTAAACACTaGAATACAGATCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQLPCKH*NTDLGN
Trigger: GTTTCCCAGATCTGTATTTCAGTGTTTACAAGGGAG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCAACACTCCGCAGATaGTGTAGCCATTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVATLRR*CSHSLQ
Trigger: CTGGAGTGAATGGCTACAGCATCTGCGGAGTGTTGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGCCAACCTCATTTACTaGCCCATCCTCCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVANLIY*PILPDR
Trigger: TCTGTCTGGGAGGATGGGGCAGTAAATGAGGTTGGC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTACTGAAATACAGATCTaGGAAACCAGGATCAACACA +
Preference number: 4 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVTEIQI*ETRINT
Trigger: TGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGT...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATATTGAAGAATCACGTGTaGAGTTCTGCAAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLILKNHV*SSARGF
Trigger: GAAACCTCTTGCAGAACTTCACACGTGATTCTTCAA...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR GCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTACCATGGCACAGAACCTaGAGTACTCGGCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVPWHRT*STRQKS
Trigger: TGACTTTTGCCGAGTACTGCAGGTTCTGTGCCATGG...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAACAAGGAGTTGCAGATaGCCATGGTTCATCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVTRSCR*PWFIRA
Trigger: TGCCCTGATGAACCATGGCCATCTGCAACTCCTTGT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATACAGAAGGGCCTGTTaGGTCTGGTTCCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVYRRAC*VWFLKD
Trigger: GTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGGACTGATACAGTGTTaGTTCTTGCTAGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIGLIQC*FLLGCK
Trigger: TTTACATCCTAGCAAGAATCAACACTGTATCAGTCC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CCA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAACTGAAATACAGATCTaGGAAACCAGGATCAACACA +
Preference number: 4 (lower is better)
Translates to: GTTEGTLGQAESSDAFLITEIQI*ETRINT
Trigger: TGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR TCA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAGGATTATGCTTCCATTaGAATTCTACCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVGLCFH*NSTSCI
Trigger: AATGCAGCTGGTAGAATTTCAATGGAAGCATAATCC...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp AGTGCGGCGGCGACGGCGGCGGCGAGGGCGTGGGCGCTGGACACGTaGCTGCTTGGGGTGGCTAGGCCTGCGGGCAGCCTTGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: SAAATAAARAWALDT*LLGVARPAGSLAPC
Trigger: GCAAGGAGCAAGGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCGTCGCCGCCGCACT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp CAGCCATTAGTGCGGCGGCGACGGCGGCGGCGAGGGCGTGGGCGCTaGACACGTGGCTGCTTGGGGTGGCTAGGCCTGCGGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QPLVRRRRRRRGRGR*TRGCLGWLGLRAAL
Trigger: CAAGGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCGTCGCCGCCGCACTAATGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GAGGAGGACCAGCCCCCAGTAGCACGATCACGGTCACGGCTGCGGTaGGGATCCCCTGCTCGACTGCGGCGGGTGCCTGCCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EEDQPPVARSRSRLR*GSPARLRRVPARLL
Trigger: CAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATCGTGCTACTGGGGGCTGGTCCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp CACGGTCACGGCTGCGGTGGGGATCCCCTGCTCGACTGCGGCGGGTaGCTGCCAGGCTGCTGGTGTCCTCTCGCTCCAGCAGCAGGTTAT +
Preference number: 5 (lower is better)
Translates to: HGHGCGGDPLLDCGG*LPGCWCPLAPAAGY
Trigger: ATAACCTGCTGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp GTCACGGCTGCGGTGGGGATCCCCTGCTCGACTGCGGCGGGTGCCTaGCAGGCTGCTGGTGTCCTCTCGCTCCAGCAGCAGGTTATTGAG +
Preference number: 5 (lower is better)
Translates to: VTAAVGIPCSTAAGA*QAAGVLSLQQQVIE
Trigger: CTCAATAACCTGCTGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GCCTTGGGTGCTGGGGGCTCAGTGGAGCGCCCATCTACTTCTGCATaGGCACGAGGCAGCCGCAGGGGTAGCTCCCGCTCCTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: ALGAGGSVERPSTSA*ARGSRRGSSRSWLS
Trigger: ACTGAGCCAGGAGCGGGAGCTACCCCTGCGGCTGCCTCGTGCCCATGCAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCACCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp TGGGTGTCTGAAGATGGGGGACGGGCTCTGCTGCAGGTGGCACACTaGGTACAGGGCACCCCAGGAGTGGGTGGGCGGGTGAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: WVSEDGGRALLQVAH*VQGTPGVGGRVRLG
Trigger: ACCCAGCCTCACCCGCCCACCCACTCCTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp TGGCGCTCTGAGGGCACGCACGGGCTACTGTCTGGGGCTCCGAGGTaGGTGTCTGAAGATGGGGGACGGGCTCTGCTGCAGGTGGCACAC +
Preference number: 5 (lower is better)
Translates to: WRSEGTHGLLSGAPR*VSEDGGRALLQVAH
Trigger: GTGTGCCACCTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGCGTGCCCTCAGAGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp AGGTGTGGGGAAAGAGGGCTGATGCAGTTCCTGCTTAGGGGCAGGTaGCTCCTCGCCTGGGCGCCCAGGCTCCGGCTTCAGAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: RCGERGLMQFLLRGR*LLAWAPRLRLQSRL
Trigger: CAGGCGGCTCTGAAGCCGGAGCCTGGGCGCCCAGGCGAGGAGTCACCTGCCCCTAAGCAGGAACTGCATCAGCCCTCTTTCCCCACACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp CTGGGTACAGGGCACCCCAGGAGTGGGTGGGCGGGTGAGGCTGGGTaGCCAGCTTCCGGGAGAGGAAATTCCAACTGGCCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: LGTGHPRSGWAGEAG*PASGRGNSNWPRDL
Trigger: CAGATCCCTGGGCCAGTTGGAATTTCCTCTCCCGGAAGCTGGCCACCCAGCCTCACCCGCCCACCCACTCCTGGGGTGCCCTGTACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp CCTGTGCGCAGACCTGACTTAGAACCGCTGGGAGGTTTGGCGCTCTaGGGGCACGCACGGGCTACTGTCTGGGGCTCCGAGGTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: PVRRPDLEPLGGLAL*GHARATVWGSEVGV
Trigger: GACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGCGTGCCCTCAGAGCGCCAAACCTCCCAGCGGTTCTAAGTCAGGTCTGCGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GCGCTTACGAAGTGGGTAATTCTTGCGGCGCCCTGTGAGGTGACCTaGGCTCTCGGGCATGCCTGGCTCCACACCCTCAACCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ALTKWVILAAPCEVT*ALGHAWLHTLNPLL
Trigger: GAGCAGGGGGTTGAGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGGCGCCGCAAGAATTACCCACTTCGTAAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp CTTGCCATTGACCTTGGGCCACTTTGGCCTCGGGGCCTTGGGTGCTaGGGGCTCAGTGGAGCGCCCATCTACTTCTGCATGGGCACGAGG +
Preference number: 5 (lower is better)
Translates to: LAIDLGPLWPRGLGC*GLSGAPIYFCMGTR
Trigger: CCTCGTGCCCATGCAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp GTTCTTGCCATTGACCTTGGGCCACTTTGGCCTCGGGGCCTTGGGTaGTGGGGGCTCAGTGGAGCGCCCATCTACTTCTGCATGGGCACG +
Preference number: 5 (lower is better)
Translates to: VLAIDLGPLWPRGLG*WGLSGAPIYFCMGT
Trigger: CGTGCCCATGCAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GGGCTGATGAGATGGCTGGACGGATGGCCCACAAGGAGTTGCAGATaGCCATGGTTCATCAGGGCAGCCTTGCCAGCCAGGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GLMRWLDGWPTRSCR*PWFIRAALPARWAC
Trigger: GCAGGCCCACCTGGCTGGCAAGGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGAGGCCAGGCGCCGCTaGCGGGGCTGGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLREARRR*RGWARP
Trigger: TGGCCTTGCCCAGCCCCGCAAGCGGCGCCTGGCCTC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCGCTGGGTGGCCGTCTCTGGGAGGTGGACAGGAGACTCCCACAAGTGGGCCACGCTGCAAAAGGCATTTaGTATGGGCAGCCGCCACAG +
Preference number: 5 (lower is better)
Translates to: PLGGRLWEVDRRLPQVGHAAKGI*YGQPPQ
Trigger: CTGTGGCGGCTGCCCATACAAAATGCCTTTTGCAGC...GTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp GCTCAGGGGCTGATGAGATGGCTGGACGGATGGCCCACAAGGAGTTaGAGATGGCCATGGTTCATCAGGGCAGCCTTGCCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQGLMRWLDGWPTRS*RWPWFIRAALPARW
Trigger: CCACCTGGCTGGCAAGGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp ATGAGATGGCTGGACGGATGGCCCACAAGGAGTTGCAGATGGCCATaGTTCATCAGGGCAGCCTTGCCAGCCAGGTGGGCCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: MRWLDGWPTRSCRWP*FIRAALPARWACSL
Trigger: GAGGCTGCAGGCCCACCTGGCTGGCAAGGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATAGCCGGGGCCGCTTCTaGGAGGAGGACCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDSRGRF*EEDQPP
Trigger: TGGGGGCTGGTCCTCCTCCAAGAAGCGGCCCCGGCT...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTTCATCAGGGCAGCCTaGCCAGCCAGGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFFIRAA*PARWAC
Trigger: GCAGGCCCACCTGGCTGGCAAGGCTGCCCTGATGAA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp GCTCCATGTTGCTGTCTTCCATCTGCAGGGGCTCTCGGCGGCCAGTaGGGCCCGAACTCAGCATGGGAAGGGACTTTCTCCGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: APCCCLPSAGALGGQ*GPNSAWEGTFSECV
Trigger: CACACACTCGGAGAAAGTCCCTTCCCATGCTGAGTTCGGGCCTCACTGGCCGCCGAGAGCCCCTGCAGATGGAAGACAGCAACATGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp GAACCAATGGGCGCTTACGAAGTGGGTAATTCTTGCGGCGCCCTGTaGGGTGACCTGGGCTCTCGGGCATGCCTGGCTCCACACCCTCAA +
Preference number: 5 (lower is better)
Translates to: EPMGAYEVGNSCGAL*GDLGSRACLAPHPQ
Trigger: TTGAGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCATTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp GCAGCCCCTCTTGGCCACAGTACAGGTAGAAGCTGCCTAGTGCAGTaGGCTCAGGCCCAACACACAGGCCATTGTAGTCGGCGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: AAPLGHSTGRSCLVQ*AQAQHTGHCSRRGC
Trigger: GCAACCCCGCCGACTACAATGGCCTGTGTGTTGGGCCTGAGCTCACTGCACTAGGCAGCTTCTACCTGTACTGTGGCCAAGAGGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp CACTCCGGGGACCGGCCACATTCTCCAGGCGAGTCAGCAGCACTTTaGAGGCCTTGGGCTTCTCAGGAACCAATGGGCGCTTACGAAGTG +
Preference number: 5 (lower is better)
Translates to: HSGDRPHSPGESAAL*RPWASQEPMGAYEV
Trigger: CACTTCGTAAGCGCCCATTGGTTCCTGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTCGCCTGGAGAATGTGGCCGGTCCCCGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp ACTTCTGCATGGGCACGAGGCAGCCGCAGGGGTAGCTCCCGCTCCTaGCTCAGTTTTAGGAAAGCAGCTGCGTTCAGGCTAGCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: TSAWARGSRRGSSRS*LSFRKAAAFRLASL
Trigger: GAGACTGGCTAGCCTGAACGCAGCTGCTTTCCTAAAACTGAGCCAGGAGCGGGAGCTACCCCTGCGGCTGCCTCGTGCCCATGCAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GCTCTCCAGAGCCTTGCTCAGGGGCTGATGAGATGGCTGGACGGATaGCCCACAAGGAGTTGCAGATGGCCATGGTTCATCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALQSLAQGLMRWLDG*PTRSCRWPWFIRAA
Trigger: GGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGCAAGGCTCTGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp CAGCCCCAAAGGGCTCTCCAGAGCCTTGCTCAGGGGCTGATGAGATaGCTGGACGGATGGCCCACAAGGAGTTGCAGATGGCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: QPQRALQSLAQGLMR*LDGWPTRSCRWPWF
Trigger: GAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGCAAGGCTCTGGAGAGCCCTTTGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp CATGGAGTACTTCCAACCTGGCTTCCCCCTAGTCACCAAATGCTGTaGCTCCGTCTCTCACCCCCACAGACGTGCCCTCCCAAGCCCGAG +
Preference number: 5 (lower is better)
Translates to: HGVLPTWLPPSHQML*LRLSPPQTCPPKPE
Trigger: CTCGGGCTTGGGAGGGCACGTCTGTGGGGGTGAGAGACGGAGCCACAGCATTTGGTGACTAGGGGGAAGCCAGGTTGGAAGTACTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGCCTGCGGGCAGCCTaGCTCCTTGCAGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDGLRAA*LLAVCL
Trigger: CAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGCC...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCCTTCACCTCGGCGCTaGGCCATGGCACAGAACCTG +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFPSPRR*AMAQNL
Trigger: CAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAGG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCACAGGGCATGGCAAGTaGGGGGAGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCTGHGK*GEPSGF
Trigger: GAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp TTTGCAGGCCTTGGGCTTCTCAGGAACCAATGGGCGCTTACGAAGTaGGTAATTCTTGCGGCGCCCTGTGAGGTGACCTGGGCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: FAGLGLLRNQWALTK*VILAAPCEVTWALG
Trigger: CCCGAGAGCCCAGGTCACCTCACAGGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAGCCCAAGGCCTGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAGGCCTGCGGGCAGCCTaGCTCCTTGCAGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTGLRAA*LLAVCL
Trigger: CAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGCC...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACATGGACACGTGGCTGCTaGGGGTGGCTAGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTWTRGC*GWLGLR
Trigger: CCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCA...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 90 bp GCGAGTCAGCAGCACTTTGCAGGCCTTGGGCTTCTCAGGAACCAATaGGCGCTTACGAAGTGGGTAATTCTTGCGGCGCCCTGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ASQQHFAGLGLLRNQ*ALTKWVILAAPCEV
Trigger: CACCTCACAGGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAGAGGCCAGGCGCCGCTaGCGGGGCTGGGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: GTTEGTLGQAESSDAFLIEARRR*RGWARP
Trigger: TGGCCTTGCCCAGCCCCGCAAGCGGCGCCTGGCCTC...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCTTCTTGCCATTGACCTaGGGCCACTTTGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCFLPLT*GHFGLG
Trigger: CCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAGAA...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCCTTCACCTCGGCGCTaGGCCATGGCACAGAACCTG +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDPSPRR*AMAQNL
Trigger: CAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAGG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCCATTTCCCTCAGGCTaGGCCCAGCCTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFPFPSG*AQPQRR
Trigger: TCTTCTCTGAGGCTGGGCCAAGCCTGAGGGAAATGG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATACAGGGCATGGCAAGTaGGGGGAGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDTGHGK*GEPSGF
Trigger: GAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGT...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCCCCTTCCCTTCAGGTTaGGGATCAGGCTTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFPFPSG*GSGFPS
Trigger: GCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGGG...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCCCTTCCCTTCAGGTTaGGGATCAGGCTTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCPFPSG*GSGFPS
Trigger: GCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGGG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTGGAAGGAGCTGTGTCTaGGGCACCTGGTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVGRSCV*GTWWCQ
Trigger: CTGGCACCACCAGGTGCCCAAGACACAGCTCCTTCC...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS-3UTR CAA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAAGCCGGGGCCGCTTCTaGGAGGAGGACCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQSRGRF*EEDQPP
Trigger: TGGGGGCTGGTCCTCCTCCAAGAAGCGGCCCCGGCT...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCACACTGCAGCCCCTCTaGGCCACAGTACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCTLQPL*ATVQVE
Trigger: TTCTACCTGTACTGTGGCCAAGAGGGGCTGCAGTGT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCGCTGCAAAAGGCATTTaGTATGGGCAGCCGCCACAG +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFAAKGI*YGQPPQ
Trigger: CTGTGGCGGCTGCCCATACAAAATGCCTTTTGCAGC...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTGGCCTGCGGGCAGCCTaGCTCCTTGCAGTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVGLRAA*LLAVCL
Trigger: CAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGCC...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAAGTTTGGACACGTGGCTGCTaGGGGTGGCTAGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: PNDQSGATHLLRDRAWQVWTRGC*GWLGLR
Trigger: CCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCA...AACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTGTCCCGGACTCGGATaGTCTCCCCATGCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDCPGLG*SPHAAL
Trigger: TAGAGCGGCATGGGGAGACAATCCGAGTCCGGGACA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACCTTCACCTCGGCGCTaGGCCATGGCACAGAACCTG +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTPSPRR*AMAQNL
Trigger: CAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAGG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACAACAGGGCATGGCAAGTaGGGGGAGCCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTTGHGK*GEPSGF
Trigger: GAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGT...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp AGATCTTGGCCACATAAGGTGTGGAGGTCTTTCGTGGGCCTGATTTaGGAAGGACGGTGTCCCGGACTCGGATTGTCTCCCCATGCCGCT +
Preference number: 5 (lower is better)
Translates to: RSWPHKVWRSFVGLI*EGRCPGLGLSPHAA
Trigger: AGCGGCATGGGGAGACAATCCGAGTCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAAGACCTCCACACCTTATGTGGCCAAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp GGCAGAGATCTTGGCCACATAAGGTGTGGAGGTCTTTCGTGGGCCTaGTTTGAGAAGGACGGTGTCCCGGACTCGGATTGTCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: GRDLGHIRCGGLSWA*FEKDGVPDSDCLPM
Trigger: CATGGGGAGACAATCCGAGTCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAAGACCTCCACACCTTATGTGGCCAAGATCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATCGAGTCAGCAGCACTTaGCAGGCCTTGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDRVSST*QALGFS
Trigger: TGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTCG...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGACACTGCAGCCCCTCTaGGCCACAGTACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: QAWPSLREDYFSEISTQGTLQPL*ATVQVE
Trigger: TTCTACCTGTACTGTGGCCAAGAGGGGCTGCAGTGT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGCTGCAAAAGGCATTTaGTATGGGCAGCCGCCACAG +
Preference number: 5 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMAAKGI*YGQPPQ
Trigger: CTGTGGCGGCTGCCCATACAAAATGCCTTTTGCAGC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATGGACACGTGGCTGCTaGGGGTGGCTAGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQWTRGC*GWLGLR
Trigger: CCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATTTTCGTGGGCCTGATTaGAGAAGGACGGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SPPRGTTEGTLGQAESSDFRGPD*RRTVSR
Trigger: CCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAA...ATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCACCACAGAAGGTACCTaGGGCCAAGCTGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCTTEGT*GQAESS
Trigger: AGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGT...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGGAGAGGTGGGTCAACTaGTCCCAGCACCAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LHPGEPQKVPWAKLRVLMERWVN*SQHQLL
Trigger: TAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTC...CATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TGGGCCACACCCATGACTGTGAGAGGTGGGTCAACTTGTCCCAGCACCAGTTGCCAGCACTCCTTTGGTTaGATTTCAGGTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: WATPMTVRGGSTCPSTSCQHSFG*ISGGCG
Trigger: GCCACACCCACCTGAAATCAAACCAAAGGAGTGCTG...GCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTCATGGGTGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp CTTCTCCTCAATGCAGGCCACACTGTTCTGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAAGGGCTCGTGCATGCTGGGACTGCG +
Preference number: 5 (lower is better)
Translates to: LLLNAGHTVLVLMSR*KHFILQGLVHAGTA
Trigger: CGCAGTCCCAGCATGCACGAGCCCTTGCAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS-3UTR CAA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGAGCACTTTGCAGGCCTaGGGCTTCTCAGGAACCAAT +
Preference number: 5 (lower is better)
Translates to: QAWPSLREDYFSEISTQGSTLQA*GFSGTN
Trigger: ATTGGTTCCTGAGAAGCCCAAGGCCTGCAAAGTGCT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACGAGTCAGCAGCACTTaGCAGGCCTTGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTRVSST*QALGFS
Trigger: TGAGAAGCCCAAGGCCTGCAAAGTGCTGCTGACTCG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CCACAGGCCAGCAAACTTAGGCCTCTGTGGCCCCCTAACCAAGTGCTGTGCTTCTCCAGCAGCAGGTTATaGAGAGCTTCAGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: PQASKLRPLWPPNQVLCFSSSRL*RASALR
Trigger: CCTCAATGCTGAAGCTCTCAATAACCTGCTGCTGGA...GAAGCACAGCACTTGGTTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGATGGCCCACAAGGAGTaGCAGATGGCCATGGTTCAT +
Preference number: 5 (lower is better)
Translates to: QAWPSLREDYFSEISTQGMAHKE*QMAMVH
Trigger: ATGAACCATGGCCATCTGCAACTCCTTGTGGGCCAT...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGTCCCGGACTCGGATaGTCTCCCCATGCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: LQASPKPNDQSGATHLLRCPGLG*SPHAAL
Trigger: TAGAGCGGCATGGGGAGACAATCCGAGTCCGGGACA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGTTTCGTGGGCCTGATTaGAGAAGGACGGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRFRGPD*RRTVSR
Trigger: CCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAA...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AACAGGGGACTGAGCCTGTTAGTCTACTCTGGGGAGCAGCATGAGGTGAGAACACCATTTCCCTCAGGCTaGGCCCAGCCTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: NRGLSLLVYSGEQHEVRTPFPSG*AQPQRR
Trigger: TCTTCTCTGAGGCTGGGCCAAGCCTGAGGGAAATGG...TGTTCTCACCTCATGCTGCTCCCCAGAGTAGACTAACAGGCTCAGTCCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGCAGCACTCCTTTGGTTaGATTTCAGGTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: QAWPSLREDYFSEISTQGQHSFG*ISGGCG
Trigger: GCCACACCCACCTGAAATCAAACCAAAGGAGTGCTG...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp CCCAGAGCAAGGCAGACATTAACCCCTCTGCTGGGCCTGCTGACCTaGGATGACTCCAGCAAGCTTCCCTGGAAATTCAGCCTAAGTATG +
Preference number: 5 (lower is better)
Translates to: PRARQTLTPLLGLLT*DDSSKLPWKFSLSM
Trigger: CATACTTAGGCTGAATTTCCAGGGAAGCTTGCTGGAGTCATCTCAGGTCAGCAGGCCCAGCAGAGGGGTTAATGTCTGCCTTGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS-3UTR CAA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTAGCACTTTGCAGGCCTaGGGCTTCTCAGGAACCAAT +
Preference number: 5 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVSTLQA*GFSGTN
Trigger: ATTGGTTCCTGAGAAGCCCAAGGCCTGCAAAGTGCT...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CAGGCTTGGCCCAGCCTCAGAGAAGACTACTTTTCGGAAATCTCCACCCAGGGGTCCAGCAGCAGGTTATaGAGAGCTTCAGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: QAWPSLREDYFSEISTQGSSSRL*RASALR
Trigger: CCTCAATGCTGAAGCTCTCAATAACCTGCTGCTGGA...CCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTTCTTGCCATTGACCTaGGGCCACTTTGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LQASPKPNDQSGATHLLRFLPLT*GHFGLG
Trigger: CCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAGAA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp GGAAATCTCCACCCAGGGGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTATGGCCCACAAGGAGTaGCAGATGGCCATGGTTCAT +
Preference number: 5 (lower is better)
Translates to: GNLHPGEPQKVPWAKLRVMAHKE*QMAMVH
Trigger: ATGAACCATGGCCATCTGCAACTCCTTGTGGGCCAT...AACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCCCCTGGGTGGAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGGAGAGGTGGGTCAACTaGTCCCAGCACCAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRERWVN*SQHQLL
Trigger: TAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTC...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 90 bp AGCAAGGCAGACATTAACCCCTCTGCTGGGCCTGCTGACCTGAGATaGCTCCAGCAAGCTTCCCTGGAAATTCAGCCTAAGTATGCCTCA +
Preference number: 5 (lower is better)
Translates to: SKADINPSAGPADLR*LQQASLEIQPKYAS
Trigger: TGAGGCATACTTAGGCTGAATTTCCAGGGAAGCTTGCTGGAGTCATCTCAGGTCAGCAGGCCCAGCAGAGGGGTTAATGTCTGCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS GCA 90 bp CTTCTCCTCAATGCAGGCCACACTGTTCTGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAAGGGCTCAAAGGGAGACAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LLLNAGHTVLVLMSR*KHFILQGLKGRQVE
Trigger: CTCCACCTGTCTCCCTTTGAGCCCTTGCAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS CCA 90 bp CGCGATGCAAACACTTCATTCTGCAAGGGCTCAAAGGGAGACAGGTaGAGGTTGTTACCAGGGCTGGAAAGCACCTCATTCCCAGAGCAA +
Preference number: 5 (lower is better)
Translates to: RDANTSFCKGSKGDR*RLLPGLESTSFPEQ
Trigger: TTGCTCTGGGAATGAGGTGCTTTCCAGCCCTGGTAACAACCTCCACCTGTCTCCCTTTGAGCCCTTGCAGAATGAAGTGTTTGCATCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS-3UTR CAA 90 bp TTGGTACAGATAGGAAATAACCAGGCTGCTCCAGCCCCCTCACAGAGTCTCAGGACCACAGAAGGTACCTaGGGCCAAGCTGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVQIGNNQAAPAPSQSLRTTEGT*GQAESS
Trigger: AGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGT...CCTGAGACTCTGTGAGGGGGCTGGAGCAGCCTGGTTATTTCCTATCTGTACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGAGAGGTGGGTCAACTaGTCCCAGCACCAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: LQASPKPNDQSGATHLLRERWVN*SQHQLL
Trigger: TAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTC...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATTCTTGCCATTGACCTaGGGCCACTTTGGCCTCGGG +
Preference number: 5 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQFLPLT*GHFGLG
Trigger: CCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAGAA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGACCACAGAAGGTACCTaGGGCCAAGCTGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LQASPKPNDQSGATHLLRTTEGT*GQAESS
Trigger: AGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGT...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAACCCTTCCCTTCAGGTTaGGGATCAGGCTTCCCAAGC +
Preference number: 5 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQPFPSG*GSGFPS
Trigger: GCTTGGGAAGCCTGATCCCAAACCTGAAGGGAAGGG...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 90 bp ACCTGCAGTACTCGGCAAAAGTCAGCACATAGCACTTCTCCTCAATaGAGGCCACACTGTTCTGGTCCTGATGTCGCGATGCAAACACTT +
Preference number: 5 (lower is better)
Translates to: TCSTRQKSAHSTSPQ*RPHCSGPDVAMQTL
Trigger: AAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAGTGCTATGTGCTGACTTTTGCCGAGTACTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
ENST00000561464.1
CDS-3UTR CAA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCAGCACTTTGCAGGCCTaGGGCTTCTCAGGAACCAAT +
Preference number: 5 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSSTLQA*GFSGTN
Trigger: ATTGGTTCCTGAGAAGCCCAAGGCCTGCAAAGTGCT...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATTCATCAGGGCAGCCTaGCCAGCCAGGTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVFIRAA*PARWAC
Trigger: GCAGGCCCACCTGGCTGGCAAGGCTGCCCTGATGAA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp GGAACCACAGAAGGTACCTTGGGCCAAGCTGAGAGTTCTGATGCTTTTCTTATAACACTGCAGCCCCTCTaGGCCACAGTACAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: GTTEGTLGQAESSDAFLITLQPL*ATVQVE
Trigger: TTCTACCTGTACTGTGGCCAAGAGGGGCTGCAGTGT...TATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTATGTCCCGGACTCGGATaGTCTCCCCATGCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVCPGLG*SPHAAL
Trigger: TAGAGCGGCATGGGGAGACAATCCGAGTCCGGGACA...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp CTCCAGGCCTCACCCAAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGTGGATTATGCTTCCATaGAAATTCTACCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LQASPKPNDQSGATHLLRWIMLP*KFYQLH
Trigger: ATGCAGCTGGTAGAATTTCAATGGAAGCATAATCCA...CCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp TTCCTGGAACCTCCATGTGTAAGGCAAGAGGAAAAATCTTCAACAAATCAGGTAATGGCCCACAAGGAGTaGCAGATGGCCATGGTTCAT +
Preference number: 5 (lower is better)
Translates to: FLEPPCVRQEEKSSTNQVMAHKE*QMAMVH
Trigger: ATGAACCATGGCCATCTGCAACTCCTTGTGGGCCAT...TACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AAGTCAATGCTCTGGAAGCCAGACTCTGGCTCTCTATGCCTCAAAGGAACAAGCTGGATTATGCTTCCATaGAAATTCTACCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: KSMLWKPDSGSLCLKGTSWIMLP*KFYQLH
Trigger: ATGCAGCTGGTAGAATTTCAATGGAAGCATAATCCA...GCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS-3UTR CAA 90 bp AAACCCAATGACCAATCAGGAGCAACTCATCTACTAAGGGACAGGGCATGGCAATGGATTATGCTTCCATaGAAATTCTACCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: KPNDQSGATHLLRDRAWQWIMLP*KFYQLH
Trigger: ATGCAGCTGGTAGAATTTCAATGGAAGCATAATCCA...TTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTCCTGATTGGTCATTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GTGCGGCGGCGACGGCGGCGGCGAGGGCGTGGGCGCTaGACACGTGGCTGCTTGGGGTGGCTAGGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: VRRRRRRRGRGR*TRGCLGWLGLR
Trigger: CCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCGTCGCCGCCGCAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CGGCGGCGGCGAGGGCGTGGGCGCTGGACACGTGGCTaGTTGGGGTGGCTAGGCCTGCGGGCAGCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: RRRRGRGRWTRG*LGWLGLRAALL
Trigger: GAGCAAGGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GCGACGGCGGCGGCGAGGGCGTGGGCGCTGGACACGTaGCTGCTTGGGGTGGCTAGGCCTGCGGGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: ATAAARAWALDT*LLGVARPAGSL
Trigger: AAGGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCGTCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GCCATTAGTGCGGCGGCGACGGCGGCGGCGAGGGCGTaGGCGCTGGACACGTGGCTGCTTGGGGTGGCTAGG +
Preference number: 6 (lower is better)
Translates to: AISAAATAAARA*ALDTWLLGVAR
Trigger: CCTAGCCACCCCAAGCAGCCACGTGTCCAGCGCCCACGCCCTCGCCGCCGCCGTCGCCGCCGCACTAATGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp GCGGTGGGGATCCCCTGCTCGACTGCGGCGGGTGCCTaGCAGGCTGCTGGTGTCCTCTCGCTCCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: AVGIPCSTAAGA*QAAGVLSLQQQ
Trigger: CTGCTGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp GGCTGCGGTGGGGATCCCCTGCTCGACTGCGGCGGGTaGCTGCCAGGCTGCTGGTGTCCTCTCGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: GCGGDPLLDCGG*LPGCWCPLAPA
Trigger: TGCTGGAGCGAGAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CACGGTCACGGCTGCGGTGGGGATCCCCTGCTCGACTaGGGCGGGTGCCTGCCAGGCTGCTGGTGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: HGHGCGGDPLLD*GGCLPGCWCPL
Trigger: GAGAGGACACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CAGCCCCCAGTAGCACGATCACGGTCACGGCTGCGGTaGGGATCCCCTGCTCGACTGCGGCGGGTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: QPPVARSRSRLR*GSPARLRRVPA
Trigger: GGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATCGTGCTACTGGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp AGCACGATCACGGTCACGGCTGCGGTGGGGATCCCCTaGTCGACTGCGGCGGGTGCCTGCCAGGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: STITVTAAVGIP*STAAGACQAAG
Trigger: ACCAGCAGCCTGGCAGGCACCCGCCGCAGTCGAGCAGGGGATCCCCACCGCAGCCGTGACCGTGATCGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GCTGGGGGCTCAGTGGAGCGCCCATCTACTTCTGCATaGGCACGAGGCAGCCGCAGGGGTAGCTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: AGGSVERPSTSA*ARGSRRGSSRS
Trigger: GGAGCGGGAGCTACCCCTGCGGCTGCCTCGTGCCCATGCAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CTTGGGGTGGCTAGGCCTGCGGGCAGCCTTGCTCCTTaGAGTGTGCCTGCAGCTGGAGCCTGTGCGCAGACC +
Preference number: 6 (lower is better)
Translates to: LGVARPAGSLAP*SVPAAGACAQT
Trigger: GGTCTGCGCACAGGCTCCAGCTGCAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGCCTAGCCACCCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GAGGGCACGCACGGGCTACTGTCTGGGGCTCCGAGGTaGGTGTCTGAAGATGGGGGACGGGCTCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: EGTHGLLSGAPR*VSEDGGRALLQ
Trigger: CTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGCGTGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CAA 72 bp CGTGGCTGCTTGGGGTGGCTAGGCCTGCGGGCAGCCTaGCTCCTTGCAGTGTGCCTGCAGCTGGAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: RGCLGWLGLRAA*LLAVCLQLEPV
Trigger: CACAGGCTCCAGCTGCAGGCACACTGCAAGGAGCAAGGCTGCCCGCAGGCCTAGCCACCCCAAGCAGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp GCACGGGCTACTGTCTGGGGCTCCGAGGTGGGTGTCTaGAGATGGGGGACGGGCTCTGCTGCAGGTGGCACA +
Preference number: 6 (lower is better)
Translates to: ARATVWGSEVGV*RWGTGSAAGGT
Trigger: TGTGCCACCTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGAGCCCCAGACAGTAGCCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp GGTGAGGGCGCAGCCCCAAAGGGCTCTCCAGAGCCTTaGTCAGGGGCTGATGAGATGGCTGGACGGATGGCC +
Preference number: 6 (lower is better)
Translates to: GEGAAPKGSPEP*SGADEMAGRMA
Trigger: GGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGCAAGGCTCTGGAGAGCCCTTTGGGGCTGCGCCCTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CAGGCCCAACACACAGGCCATTGTAGTCGGCGGGGTTaGCAGGCATCGGCAGCGGCGACAGCTGAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: QAQHTGHCSRRG*QASAAATAEVW
Trigger: CCACACCTCAGCTGTCGCCGCTGCCGATGCCTGGCAACCCCGCCGACTACAATGGCCTGTGTGTTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CGAGGTGGGTGTCTGAAGATGGGGGACGGGCTCTGCTaGAGGTGGCACACTGGGTACAGGGCACCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RGGCLKMGDGLC*RWHTGYRAPQE
Trigger: CTCCTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCACCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CTCCGAGGTGGGTGTCTGAAGATGGGGGACGGGCTCTaGTGCAGGTGGCACACTGGGTACAGGGCACCCCAG +
Preference number: 6 (lower is better)
Translates to: LRGGCLKMGDGL*CRWHTGYRAPQ
Trigger: CTGGGGTGCCCTGTACCCAGTGTGCCACCTGCAGCAGAGCCCGTCCCCCATCTTCAGACACCCACCTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CAA 90 bp CTGGTGTCCTCTCGCTCCAGCAGCAGGTTATTGAGAGCTTCAGCATaGAGGGAGGCCAGGCGCCGCTTGCGGGGCTGGGCAAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LVSSRSSSRLLRASA*REARRRLRGWARPG
Trigger: CCCTGGCCTTGCCCAGCCCCGCAAGCGGCGCCTGGCCTCCCTCAATGCTGAAGCTCTCAATAACCTGCTGCTGGAGCGAGAGGACACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp GAAAGAGGGCTGATGCAGTTCCTGCTTAGGGGCAGGTaGCTCCTCGCCTGGGCGCCCAGGCTCCGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: ERGLMQFLLRGR*LLAWAPRLRLQ
Trigger: CTGAAGCCGGAGCCTGGGCGCCCAGGCGAGGAGTCACCTGCCCCTAAGCAGGAACTGCATCAGCCCTCTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp TCCATCTCGGCGGGGACCTTCATCGGGTGCTGGCTCTaGAGACAGGTCCCGACTTCCTCCTCCAAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: SISAGTFIGCWL*RQVPTSSSKVP
Trigger: GGGGACCTTGGAGGAGGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGATGAAGGTCCCCGCCGAGATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GACCTTGGGCCACTTTGGCCTCGGGGCCTTGGGTGCTaGGGGCTCAGTGGAGCGCCCATCTACTTCTGCATG +
Preference number: 6 (lower is better)
Translates to: DLGPLWPRGLGC*GLSGAPIYFCM
Trigger: CATGCAGAAGTAGATGGGCGCTCCACTGAGCCCCCAGCACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp AGACCTGACTTAGAACCGCTGGGAGGTTTGGCGCTCTaGGGGCACGCACGGGCTACTGTCTGGGGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: RPDLEPLGGLAL*GHARATVWGSE
Trigger: CTCGGAGCCCCAGACAGTAGCCCGTGCGTGCCCTCAGAGCGCCAAACCTCCCAGCGGTTCTAAGTCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CTGGACGGATGGCCCACAAGGAGTTGCAGATGGCCATaGTTCATCAGGGCAGCCTTGCCAGCCAGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: LDGWPTRSCRWP*FIRAALPARWA
Trigger: GGCCCACCTGGCTGGCAAGGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GCGGCAAAGGAACACCAGCTCAGGGTCCGTGTCCTCTaGCACTGTGCGGTGGGGTGGGGTGGAATAGTCTGC +
Preference number: 6 (lower is better)
Translates to: AAKEHQLRVRVL*HCAVGWGGIVC
Trigger: GCAGACTATTCCACCCCACCCCACCGCACAGTGCCAGAGGACACGGACCCTGAGCTGGTGTTCCTTTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CAA 72 bp TCTCGCTCCAGCAGCAGGTTATTGAGAGCTTCAGCATaGAGGGAGGCCAGGCGCCGCTTGCGGGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRSSSRLLRASA*REARRRLRGWA
Trigger: TGCCCAGCCCCGCAAGCGGCGCCTGGCCTCCCTCAATGCTGAAGCTCTCAATAACCTGCTGCTGGAGCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp TGCTGTCTTCCATCTGCAGGGGCTCTCGGCGGCCAGTaGGGCCCGAACTCAGCATGGGAAGGGACTTTCTCC +
Preference number: 6 (lower is better)
Translates to: CCLPSAGALGGQ*GPNSAWEGTFS
Trigger: GGAGAAAGTCCCTTCCCATGCTGAGTTCGGGCCTCACTGGCCGCCGAGAGCCCCTGCAGATGGAAGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp TGGCCCCCTGCCAAGCCTTGGGATAGTTCTTGCCATTaGCCTTGGGCCACTTTGGCCTCGGGGCCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: WPPAKPWDSSCH*PWATLASGPWV
Trigger: CACCCAAGGCCCCGAGGCCAAAGTGGCCCAAGGTCAATGGCAAGAACTATCCCAAGGCTTGGCAGGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp AAGTGGGTAATTCTTGCGGCGCCCTGTGAGGTGACCTaGGCTCTCGGGCATGCCTGGCTCCACACCCTCAAC +
Preference number: 6 (lower is better)
Translates to: KWVILAAPCEVT*ALGHAWLHTLN
Trigger: GTTGAGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAGGTCACCTCACAGGGCGCCGCAAGAATTACCCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CTTCCAACCTGGCTTCCCCCTAGTCACCAAATGCTGTaGCTCCGTCTCTCACCCCCACAGACGTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPTWLPPSHQML*LRLSPPQTCPP
Trigger: GGGAGGGCACGTCTGTGGGGGTGAGAGACGGAGCCACAGCATTTGGTGACTAGGGGGAAGCCAGGTTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS CAA 72 bp AGGCTGCTGGTGTCCTCTCGCTCCAGCAGCAGGTTATaGAGAGCTTCAGCATTGAGGGAGGCCAGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: RLLVSSRSSSRL*RASALREARRR
Trigger: GCGGCGCCTGGCCTCCCTCAATGCTGAAGCTCTCAATAACCTGCTGCTGGAGCGAGAGGACACCAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp AGGGCTCTCCAGAGCCTTGCTCAGGGGCTGATGAGATaGCTGGACGGATGGCCCACAAGGAGTTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: RALQSLAQGLMR*LDGWPTRSCRW
Trigger: CCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGCAAGGCTCTGGAGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CCCCATGCCGCTCTACCGCCTGGTAGCTCTTTCGGATaGCTGGCTCCGGCTCATCCAAGACATACACAGCCT +
Preference number: 6 (lower is better)
Translates to: PHAALPPGSSFG*LAPAHPRHTQP
Trigger: AGGCTGTGTATGTCTTGGATGAGCCGGAGCCAGCCATCCGAAAGAGCTACCAGGCGGTAGAGCGGCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CTGTCTTTCGGCTGGGGAGGCCTTCACCTCGGCGCTTaGCCATGGCACAGAACCTGCAGTACTCGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: LSFGWGGLHLGA*PWHRTCSTRQK
Trigger: CTTTTGCCGAGTACTGCAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAGGCCTCCCCAGCCGAAAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
ENST00000561464.1
CDS CAA 72 bp GCTGTCTTTCGGCTGGGGAGGCCTTCACCTCGGCGCTaGGCCATGGCACAGAACCTGCAGTACTCGGCAAAA +
Preference number: 6 (lower is better)
Translates to: AVFRLGRPSPRR*AMAQNLQYSAK
Trigger: TTTTGCCGAGTACTGCAGGTTCTGTGCCATGGCCAAGCGCCGAGGTGAAGGCCTCCCCAGCCGAAAGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
ENST00000561464.1
CDS CAA 90 bp GAGAGAGATGGGAAGTCCCTGTTAGGTGCGGGAAGGAGCTGTGTCTaGGGCACCTGGTGGTGCCAGAGCCCGCCTAGGACTTCACTAAGC +
Preference number: 6 (lower is better)
Translates to: ERDGKSLLGAGRSCV*GTWWCQSPPRTSLS
Trigger: GCTTAGTGAAGTCCTAGGCGGGCTCTGGCACCACCAGGTGCCCAAGACACAGCTCCTTCCCGCACCTAACAGGGACTTCCCATCTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS GCA 72 bp GAGTACTTCCAACCTGGCTTCCCCCTAGTCACCAAATaGTGTGGCTCCGTCTCTCACCCCCACAGACGTGCC +
Preference number: 6 (lower is better)
Translates to: EYFQPGFPLVTK*CGSVSHPHRRA
Trigger: GGCACGTCTGTGGGGGTGAGAGACGGAGCCACAGCATTTGGTGACTAGGGGGAAGCCAGGTTGGAAGTACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS CCA 72 bp TCAGCATGGGAAGGGACTTTCTCCGAGTGTGTGTCATaGAGTACTTCCAACCAGAACGGGCGGCGCGGACGG +
Preference number: 6 (lower is better)
Translates to: SAWEGTFSECVS*STSNQNGRRGR
Trigger: CCGTCCGCGCCGCCCGTTCTGGTTGGAAGTACTCCATGACACACACTCGGAGAAAGTCCCTTCCCATGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416165.6
CDS CAA 90 bp TGGCTCAGTTTTAGGAAAGCAGCTGCGTTCAGGCTAGCCAGTCTCTaGGGAGCTGGGTCTCCATCTCGGCGGGGACCTTCATCGGGTGCT +
Preference number: 6 (lower is better)
Translates to: WLSFRKAAAFRLASL*GAGSPSRRGPSSGA
Trigger: AGCACCCGATGAAGGTCCCCGCCGAGATGGAGACCCAGCTCCCAAGAGACTGGCTAGCCTGAACGCAGCTGCTTTCCTAAAACTGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS GCA 72 bp CTGATGAGATGGCTGGACGGATGGCCCACAAGGAGTTaGAGATGGCCATGGTTCATCAGGGCAGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LMRWLDGWPTRS*RWPWFIRAALP
Trigger: TGGCAAGGCTGCCCTGATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CTTGGGCTTCTCAGGAACCAATGGGCGCTTACGAAGTaGGTAATTCTTGCGGCGCCCTGTGAGGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: LGLLRNQWALTK*VILAAPCEVTW
Trigger: CCAGGTCACCTCACAGGGCGCCGCAAGAATTACCCACTTCGTAAGCGCCCATTGGTTCCTGAGAAGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp AGCCTTGCTCAGGGGCTGATGAGATGGCTGGACGGATaGCCCACAAGGAGTTGCAGATGGCCATGGTTCATC +
Preference number: 6 (lower is better)
Translates to: SLAQGLMRWLDG*PTRSCRWPWFI
Trigger: GATGAACCATGGCCATCTGCAACTCCTTGTGGGCCATCCGTCCAGCCATCTCATCAGCCCCTGAGCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp ATTTTGTATGGGCAGCCGCCACAGGTAGTGCCAGCGTaGGTAACAGACAGGGGCAACACTCCGCAGATGCTG +
Preference number: 6 (lower is better)
Translates to: ILYGQPPQVVPA*VTDRGNTPQML
Trigger: CAGCATCTGCGGAGTGTTGCCCCTGTCTGTTACCCACGCTGGCACTACCTGTGGCGGCTGCCCATACAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp ATGCCGCTCTACCGCCTGGTAGCTCTTTCGGATGGCTaGCTCCGGCTCATCCAAGACATACACAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: MPLYRLVALSDG*LRLIQDIHSLL
Trigger: GAGAAGGCTGTGTATGTCTTGGATGAGCCGGAGCCAGCCATCCGAAAGAGCTACCAGGCGGTAGAGCGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp CAGGGATCTGCAGCCTGCTGCAAAAGGCATTTTGTATaGGCAGCCGCCACAGGTAGTGCCAGCGTGGGTAAC +
Preference number: 6 (lower is better)
Translates to: QGSAACCKRHFV*AAATGSASVGN
Trigger: GTTACCCACGCTGGCACTACCTGTGGCGGCTGCCCATACAAAATGCCTTTTGCAGCAGGCTGCAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561234.5
CDS CAA 72 bp TTTAGGAAAGCAGCTGCGTTCAGGCTAGCCAGTCTCTaGGGAGCTGGGTCTCCATCTCGGCGGGGACCTTCA +
Preference number: 6 (lower is better)
Translates to: FRKAAAFRLASL*GAGSPSRRGPS
Trigger: TGAAGGTCCCCGCCGAGATGGAGACCCAGCTCCCAAGAGACTGGCTAGCCTGAACGCAGCTGCTTTCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp CCACATAAGGTGTGGAGGTCTTTCGTGGGCCTGATTTaGGAAGGACGGTGTCCCGGACTCGGATTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: PHKVWRSFVGLI*EGRCPGLGLSP
Trigger: GGGAGACAATCCGAGTCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAAGACCTCCACACCTTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS CCA 72 bp GGATCTGCAGCCTTCTGCTGCAAAAGGCATTTTGTATaGGCAGCCGCCACAGGTAGTGCCAGCGTGGGTAAC +
Preference number: 6 (lower is better)
Translates to: GSAAFCCKRHFV*AAATGSASVGN
Trigger: GTTACCCACGCTGGCACTACCTGTGGCGGCTGCCCATACAAAATGCCTTTTGCAGCAGAAGGCTGCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000560846.1
CDS TCA 72 bp CTTGGCCACATAAGGTGTGGAGGTCTTTCGTGGGCCTaGTTTGAGAAGGACGGTGTCCCGGACTCGGATTGT +
Preference number: 6 (lower is better)
Translates to: LGHIRCGGLSWA*FEKDGVPDSDC
Trigger: ACAATCCGAGTCCGGGACACCGTCCTTCTCAAATCAGGCCCACGAAAGACCTCCACACCTTATGTGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
CDS TCA 72 bp AGGCAGACATTAACCCCTCTGCTGGGCCTGCTGACCTaGGATGACTCCAGCAAGCTTCCCTGGAAATTCAGC +
Preference number: 6 (lower is better)
Translates to: RQTLTPLLGLLT*DDSSKLPWKFS
Trigger: GCTGAATTTCCAGGGAAGCTTGCTGGAGTCATCTCAGGTCAGCAGGCCCAGCAGAGGGGTTAATGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS GCA 72 bp AATGCAGGCCACACTGTTCTGGTCCTGATGTCGCGATaGAAACACTTCATTCTCGTGCATGCTGGGACTGCG +
Preference number: 6 (lower is better)
Translates to: NAGHTVLVLMSR*KHFILVHAGTA
Trigger: CGCAGTCCCAGCATGCACGAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS CAA 72 bp TCATTCTGCAAGGGCTCAAAGGGAGACAGGTGGAGGTaGTTACCAGGGCTGGAAAGCACCTCATTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: SFCKGSKGDRWR*LPGLESTSFPE
Trigger: CTCTGGGAATGAGGTGCTTTCCAGCCCTGGTAACAACCTCCACCTGTCTCCCTTTGAGCCCTTGCAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS CAA 90 bp GCAAACACTTCATTCTGCAAGGGCTCAAAGGGAGACAGGTGGAGGTaGTTACCAGGGCTGGAAAGCACCTCATTCCCAGAGCAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: ANTSFCKGSKGDRWR*LPGLESTSFPEQGR
Trigger: TCTGCCTTGCTCTGGGAATGAGGTGCTTTCCAGCCCTGGTAACAACCTCCACCTGTCTCCCTTTGAGCCCTTGCAGAATGAAGTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS TCA 72 bp CACTTCTCCTCAATGCAGGCCACACTGTTCTGGTCCTaGTGTCGCGATGCAAACACTTCATTCTGCAAGGGC +
Preference number: 6 (lower is better)
Translates to: HFSSMQATLFWS*CRDANTSFCKG
Trigger: GCCCTTGCAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416165.6
ENST00000561234.5
ENST00000561464.1
CDS GCA 72 bp AATGCAGGCCACACTGTTCTGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAAGGGCTCGTGCATGCT +
Preference number: 6 (lower is better)
Translates to: NAGHTVLVLMSR*KHFILQGLVHA
Trigger: AGCATGCACGAGCCCTTGCAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416165.6
ENST00000561234.5
CDS GCA 72 bp ACTCGGCAAAAGTCAGCACATAGCACTTCTCCTCAATaGAGGCCACACTGTTCTGGTCCTGATGTCGCGATG +
Preference number: 6 (lower is better)
Translates to: TRQKSAHSTSPQ*RPHCSGPDVAM
Trigger: CATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAGTGCTATGTGCTGACTTTTGCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416165.6
ENST00000560846.1
ENST00000561234.5
ENST00000561464.1
CDS TCA 72 bp CACTTCTCCTCAATGCAGGCCACACTGTTCTGGTCCTaGTGTCGCGATGCAAACACTTCATTCTCGTGCATG +
Preference number: 6 (lower is better)
Translates to: HFSSMQATLFWS*CRDANTSFSCM
Trigger: CATGCACGAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATTGAGGAGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560846.1
CDS GCA 72 bp AATGCAGGCCACACTGTTCTGGTCCTGATGTCGCGATaGAAACACTTCATTCTGCAAGGGCTCAAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: NAGHTVLVLMSR*KHFILQGLKGR
Trigger: TCTCCCTTTGAGCCCTTGCAGAATGAAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCCTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS CCA 72 bp AACACTTCATTCTGCAAGGGCTCAAAGGGAGACAGGTaGAGGTTGTTACCAGGGCTGGAAAGCACCTCATTC +
Preference number: 6 (lower is better)
Translates to: NTSFCKGSKGDR*RLLPGLESTSF
Trigger: GAATGAGGTGCTTTCCAGCCCTGGTAACAACCTCCACCTGTCTCCCTTTGAGCCCTTGCAGAATGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561464.1
CDS CAA 72 bp ACACACAGATGGCAGTCACCTCTTTTAGCACACAGCTaGGTGGAGAGCCTATGGGGTGTTAGGAGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: THRWQSPLLAHS*VESLWGVRRSL
Trigger: AAGACTCCTCCTAACACCCCATAGGCTCTCCACCAAGCTGTGTGCTAAAAGAGGTGACTGCCATCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561464.1