RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAHCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000266074

Ensembl transcript IDs: ENST00000307745.8, ENST00000578541.1, ENST00000582709.1, ENST00000583828.1, ENST00000584330.2, ENST00000584436.7, ENST00000585224.1, ENST00000625166.1, ENST00000675386.2

Found 1642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCGTCAAGGGTCCCACCTGACCCTCCCGTGGCCTCTGCCCCCTaGCCCGAGATGCCTCTGTCGTCCCAGGTGCCCCCGTTGGAACCC +
Preference number: 1 (lower is better)
Translates to: VPSRVPPDPPVASAP*PEMPLSSQVPPLEP
Trigger: GGGTTCCAACGGGGGCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp TGCATATTTGCTCAGATGCGCCCTTGGGAGGCCGGGGCTGCCTCCTaGCCGGTGGCTTGGCCGACGCCAGGCTCCGCACACAGGGTCCCT +
Preference number: 1 (lower is better)
Translates to: CIFAQMRPWEAGAAS*PVAWPTPGSAHRVP
Trigger: AGGGACCCTGTGTGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 90 bp GGGCCGGGGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATaGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGA +
Preference number: 1 (lower is better)
Translates to: GPGTHEGHSPTLRRG*DGTGFRHLERSFQG
Trigger: TCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp GGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTaGACCCTCCTCGGCCCTCTCTGGAACTCCAGTGGCTCAGCATGC +
Preference number: 1 (lower is better)
Translates to: GTRTRRRSRGSNLRG*TLLGPLWNSSGSAC
Trigger: GCATGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 90 bp GGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTGTaGTGTGGGGGACACAGAGCTCGTCCTAGAGCAGTGGCTAACTTG +
Preference number: 1 (lower is better)
Translates to: GLGYRAPTSTLLRGL*CGGHRARPRAVANL
Trigger: CAAGTTAGCCACTGCTCTAGGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR TCA 90 bp ACAGTCGGAGGTACTAGGGAATATGGCTTGGATTCAAATCTCCCGTaGACTGCCGGTGCGGGAAACGGAGGGCGCTGTGGGTGGGGCGGG +
Preference number: 1 (lower is better)
Translates to: TVGGTREYGLDSNLP*TAGAGNGGRCGWGG
Trigger: CCCGCCCCACCCACAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATCCAAGCCATATTCCCTAGTACCTCCGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp AACCGTAAGAAAGCCTGGGTCTTGCCCTGTGGGCTTTTGCATATTTaGTCAGATGCGCCCTTGGGAGGCCGGGGCTGCCTCCTGCCCGGT +
Preference number: 1 (lower is better)
Translates to: NRKKAWVLPCGLLHI*SDAPLGGRGCLLPG
Trigger: ACCGGGCAGGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTTACGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 90 bp GCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTCCGACACCTaGAGCGCTCTTTCCAGGGAAAACCGTAAGAAAGCCTGGGTCTTG +
Preference number: 1 (lower is better)
Translates to: ARPSAEDGTGLDSDT*SALSRENRKKAWVL
Trigger: CAAGACCCAGGCTTTCTTACGGTTTTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp ACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTaGACTCATGCGAGACAAAGGGTAGGCTCGGGGGTGGGAGCGGGG +
Preference number: 1 (lower is better)
Translates to: TSSNHLPRQPPGMKY*THARQRVGSGVGAG
Trigger: CCCCGCTCCCACCCCCGAGCCTACCCTTTGTCTCGCATGAGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 90 bp AGCAGAGGATCCAACCTCCGTGGCTGCACCCTCCTCGGCCCTCTCTaGAACTCCAGTGGCTCAGCATGCCCCCGTGCATTTTTCTTCACT +
Preference number: 1 (lower is better)
Translates to: SRGSNLRGCTLLGPL*NSSGSACPRAFFFT
Trigger: AGTGAAGAAAAATGCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp CCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGAACCTGGCCAAACTaGCCCTTCTCACGGCACCTACTACTTTCAGGAAAGTTAGGACCC +
Preference number: 1 (lower is better)
Translates to: PHRPRALPSSGTWPN*PFSRHLLLSGKLGP
Trigger: GGGTCCTAACTTTCCTGAAAGTAGTAGGTGCCGTGAGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 90 bp GCTTTCCCTGGTGGGAGACAGTCGGAGGTACTAGGGAATATGGCTTaGATTCAAATCTCCCGTGAACTGCCGGTGCGGGAAACGGAGGGC +
Preference number: 1 (lower is better)
Translates to: AFPGGRQSEVLGNMA*IQISRELPVRETEG
Trigger: GCCCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATCCAAGCCATATTCCCTAGTACCTCCGACTGTCTCCCACCAGGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 90 bp CCTGGAGCGCTCTTTCCAGGGAAAACCGTAAGAAAGCCTGGGTCTTaGCCTGTGGGCTTTTGCATATTTGCTCAGATGCGCCCTTGGGAG +
Preference number: 1 (lower is better)
Translates to: PGALFPGKTVRKPGS*PVGFCIFAQMRPWE
Trigger: CTCCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTTACGGTTTTCCCTGGAAAGAGCGCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTCCTGCCCGGTGGCTTaGCCGACGCCAGGCTCCGCA +
Preference number: 2 (lower is better)
Translates to: GPMRATARPSAEDGTGLDSCPVA*PTPGSA
Trigger: TGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCTCAGATGCGCCCTTaGGAGGCCGGGGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAQMRP*EAGAAS
Trigger: GGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCCGTGAACTGCCGGTaGGGGAAACGGAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPVNCR*GKRRAL
Trigger: CAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCCCCCTGCCCCGAGATaGCTCTGTCGTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSPPAPR*LCRPRC
Trigger: GCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCTGCTTCCCGAGTGTaGCAGGGCGGCGAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPASRV*QGGEGE
Trigger: CTCACCCTCGCCGCCCTGGCACACTCGGGAAGCAGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGCTCAGATGCGCCCTTaGGAGGCCGGGGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGAQMRP*EAGAAS
Trigger: GGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCGAGGCCTGTGGTGTaGGGGACACAGAGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSRPVV*GTQSSS
Trigger: GGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACCCCCTGCCCCGAGATaGCTCTGTCGTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREPPAPR*LCRPRC
Trigger: GCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGTGGCCTCTGCCCCCTaGCCCGAGATGCCTCTGTCG +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREVASAP*PEMPLS
Trigger: CGACAGAGGCATCTCGGGGCAGGGGGCAGAGGCCAC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTCAGAGCTGGGCCCTaGTTCCCGAGTGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGLRAGP*FPSVPG
Trigger: CCCTGGCACACTCGGGAAGCAGGGCCCAGCTCTGAG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCTCAGAGCTGGGCCCTaGTTCCCGAGTGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSLRAGP*FPSVPG
Trigger: CCCTGGCACACTCGGGAAGCAGGGCCCAGCTCTGAG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGTCCCTGGCGCACGTaGGAGGCATCTGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGPWRT*EASAVG
Trigger: GCCCACCGCAGATGCCTCCCACGTGCGCCAGGGACC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCGCACACAGGGTCCCTaGCGCACGTGGGAGGCATCT +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGRTQGP*RTWEAS
Trigger: AGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCTCAGATGCGCCCTTaGGAGGCCGGGGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAQMRP*EAGAAS
Trigger: GGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCCTGGGGCCAGGATTTaGGCTCAGGTGGTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSPGARI*AQVVRG
Trigger: CCCCCTGACCACCTGAGCCCAAATCCTGGCCCCAGG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGTCTGTCCTTGGCTGTaGGAGAAGGGGAGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPVCPWL*EKGRGV
Trigger: CACACCCCTCCCCTTCTCCCACAGCCAAGGACAGAC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCTCTGGAACTCCAGTaGCTCAGCATGCCCCCGTGC +
Preference number: 2 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSLELQ*LSMPPC
Trigger: GCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCTCTGTCGTCCCAGGTaGCCCCGTTGGAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSLCRPR*PRWNPA
Trigger: AGCTGGGTTCCAACGGGGGCACCTGGGACGACAGAG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTCTGTCGTCCCAGGTaGCCCCGTTGGAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGLCRPR*PRWNPA
Trigger: AGCTGGGTTCCAACGGGGGCACCTGGGACGACAGAG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCATTCCCTGGGGATACTaGGGCAGAGCCCTCGAGGGG +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSIPWGY*GRALEG
Trigger: CCCCTCGAGGGCTCTGCCCCAGTATCCCCAGGGAAT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATCCTGCCCGGTGGCTTaGCCGACGCCAGGCTCCGCA +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKSCPVA*PTPGSA
Trigger: TGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACTGCCTCCTGCCCGGTaGCTTGGCCGACGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKLPPAR*LGRRQA
Trigger: AGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCCAGGTGCCCCCGTTaGAACCCAGCTGGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPRCPR*NPAGLR
Trigger: TCTCAGCCCAGCTGGGTTCCAACGGGGGCACCTGGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCACAGCACTGCTGGCCTaGCCTCACCACCATCTACGC +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGTALLA*PHHHLR
Trigger: GCGTAGATGGTGGTGAGGCCAGGCCAGCAGTGCTGT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATCGAGGCCTGTGGTGTaGGGGACACAGAGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESRPVV*GTQSSS
Trigger: GGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCTCCTCGGCCCTCTCTaGAACTCCAGTGGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSLLGPL*NSSGSA
Trigger: TGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTRAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCAAGAGATCAGAGGGTaGCGTCAAGGGTCCCACCTG +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSQEIRG*RQGSHL
Trigger: CAGGTGGGACCCTTGACGGCACCCTCTGATCTCTTG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCTGCCCGGTGGCTTaGCCGACGCCAGGCTCCGCA +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTSCPVA*PTPGSA
Trigger: TGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGGATGGGACGGGACTaGATTCCGACACCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERMGRD*IPTPGA
Trigger: CGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCTGGGCTTTGCCTCTTaGATCCTTTCCCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQLGFAS*ILSPRA
Trigger: GGCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCTGGGTCTTGCCCTGTaGGCTTTTGCATATTTGCTC +
Preference number: 2 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPLGLAL*AFAYLL
Trigger: GAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGGATGGGACGGGACTaGATTCCGACACCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRMGRD*IPTPGA
Trigger: CGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGATTTGGGCTCAGGTaGTCAGGGGGACCCTCATTC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGFGLR*SGGPSF
Trigger: GAATGAGGGTCCCCCTGACCACCTGAGCCCAAATCC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CAA 90 bp CAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTaGCCTCTTGAATCCTTTCCCCACGGGCCCCTCATCACCACCCCC +
Preference number: 2 (lower is better)
Translates to: QVRCSRLLSHSLVWA*PLESFPHGPLITTP
Trigger: GGGGGTGGTGATGAGGGGCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTGCCCTGTGGGCTTTTaGATATTTGCTCAGATGCGC +
Preference number: 2 (lower is better)
Translates to: GPMRATARPSAEDGTGLDCPVGF*IFAQMR
Trigger: GCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTRALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACACCCACCAGCACCCTaGTTCGAGGCCTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKHPPAP*FEACGV
Trigger: CACACCACAGGCCTCGAAGCAGGGTGCTGGTGGGTG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGGTCCCTGGCGCACGTaGGAGGCATCTGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFGPWRT*EASAVG
Trigger: GCCCACCGCAGATGCCTCCCACGTGCGCCAGGGACC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTTCTGCTTTCCCTGGTaGGAGACAGTCGGAGGTACT +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSFCFPW*ETVGGT
Trigger: AGTACCTCCGACTGTCTCCCACCAGGGAAAGCAGAA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGAGCAGTGGCTAACTTaGGGGGCTTTCCTGAAGCTC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREEQWLT*GAFLKL
Trigger: GAGCTTCAGGAAAGCCCCCCAAGTTAGCCACTGCTC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CAA 90 bp GACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATaGCACTCATGCGAGACAAAGGGTAGGCTCGGGGGTGGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: DLVQPPPQTTTGNEI*HSCETKGRLGGGSG
Trigger: CCCGCTCCCACCCCCGAGCCTACCCTTTGTCTCGCATGAGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCTGGGCTTTGCCTCTTaGATCCTTTCCCCACGGGCC +
Preference number: 2 (lower is better)
Translates to: DLGSGGQGDPHSMPQALALGFAS*ILSPRA
Trigger: GGCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCCGTGAACTGCCGGTaGGGGAAACGGAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPVNCR*GKRRAL
Trigger: CAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCCCCCTGCCCCGAGATaGCTCTGTCGTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTPPAPR*LCRPRC
Trigger: GCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCCCTGGTCTGGGCTTTaGCTCTTGAATCCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHPWSGL*LLNPFP
Trigger: GGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCTGGGTCTTGCCCTGTaGGCTTTTGCATATTTGCTC +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSLGLAL*AFAYLL
Trigger: GAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTGGATTCCGACACCTaGAGCGCTCTTTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLDSDT*SALSRE
Trigger: TTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATCACACTCCCTGGTCTaGGCTTTGCCTCTTGAATCC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESHSLV*ALPLES
Trigger: GGATTCAAGAGGCAAAGCCCAGACCAGGGAGTGTGA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGAGGAGAGAATCTGGTaGGACTGTGAACCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHEERIW*DCEPAL
Trigger: GAGGGCAGGTTCACAGTCCCACCAGATTCTCTCCTC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGCAGATTTGGCTGGTaGAAAAGGGGGCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGRFGW*KRGPRK
Trigger: CTTTCTGGGCCCCCTTTTCCACCAGCCAAATCTGCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGAGGCTGAAGGCTGTTaGGCTCAGGTCCAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTEAEGC*AQVQAA
Trigger: GGCTGCCTGGACCTGAGCCCAACAGCCTTCAGCCTC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CAA 90 bp TCCAGGGAAAACCGTAAGAAAGCCTGGGTCTTGCCCTGTGGGCTTTaGCATATTTGCTCAGATGCGCCCTTGGGAGGCCGGGGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SRENRKKAWVLPCGL*HICSDAPLGGRGCL
Trigger: GAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTTACGGTTTTCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTGTTTTGAACACAGGTaGGATGCTCACGGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSCFEHR*DAHGCC
Trigger: ACAACAGCCGTGAGCATCTCACCTGTGTTCAAAACA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTGTTTTGAACACAGGTaGGATGCTCACGGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGCFEHR*DAHGCC
Trigger: ACAACAGCCGTGAGCATCTCACCTGTGTTCAAAACA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCCCATCAGGCCATCTaGCCCACCAAGTGGCACAGA +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAHQAI*PTKWHR
Trigger: TCTGTGCCACTTGGTGGGGCAGATGGCCTGATGGGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCGAGGGGTGCTGCTTaGACCTGGGGCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTSRGAA*TWGQDL
Trigger: CAAATCCTGGCCCCAGGTGCAAGCAGCACCCCTCGA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGCCCTCGAGGGGTGCTaGTTGCACCTGGGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPALEGC*LHLGPG
Trigger: TCCTGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGGTCCCTGGCGCACGTaGGAGGCATCTGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHGPWRT*EASAVG
Trigger: GCCCACCGCAGATGCCTCCCACGTGCGCCAGGGACC...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCGCACACAGGGTCCCTaGCGCACGTGGGAGGCATCT +
Preference number: 2 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFRTQGP*RTWEAS
Trigger: AGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCTGGGTCTTGCCCTGTaGGCTTTTGCATATTTGCTC +
Preference number: 2 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGLGLAL*AFAYLL
Trigger: GAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTTCTGCTTTCCCTGGTaGGAGACAGTCGGAGGTACT +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKFCFPW*ETVGGT
Trigger: AGTACCTCCGACTGTCTCCCACCAGGGAAAGCAGAA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGATTTCTGCTTTCCCTaGTGGGAGACAGTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKDFCFP*WETVGG
Trigger: ACCTCCGACTGTCTCCCACCAGGGAAAGCAGAAATC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAACCTTGTCACGCGGATaGGGAAAAACCCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRETLSRG*GKTLFH
Trigger: GTGGAAAAGGGTTTTTCCCCATCCGCGTGACAAGGT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCCAGGTGCCCCCGTTaGAACCCAGCTGGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPRCPR*NPAGLR
Trigger: TCTCAGCCCAGCTGGGTTCCAACGGGGGCACCTGGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTGGCCTCAGACCAACTaGCCCCGGAAACAGAAATCA +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHWPQTN*PRKQKS
Trigger: TGATTTCTGTTTCCGGGGCCAGTTGGTCTGAGGCCA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACATCTGCCCCACCAAGTaGCACAGAAAAGGCCGAGAA +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHICPTK*HRKGRE
Trigger: TTCTCGGCCTTTTCTGTGCCACTTGGTGGGGCAGAT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACTCCTGGGGAGCCTCTaGGAACGGCCCTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPLLGSL*ERPFRG
Trigger: CCCCCTGAAGGGCCGTTCCCAGAGGCTCCCCAGGAG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACATTCTGCTTGGGGGTaGGGAGAGAATCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKHSAWG*GENLVG
Trigger: TCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCAAATCTCCCGTGAACTaGCGGTGCGGGAAACGGAGG +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTKSPVN*RCGKRR
Trigger: CCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACTTTTGCATGCATTCTaGTTGGGGGTGAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRELLHAF*LGVRRE
Trigger: TTCTCTCCTCACCCCCAAGCAGAATGCATGCAAAAG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPRALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGCATATTTGCTCAGATaGGCCCTTGGGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTAYLLR*ALGRPG
Trigger: CCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACACCCACCAGCACCCTaGTTCGAGGCCTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPHPPAP*FEACGV
Trigger: CACACCACAGGCCTCGAAGCAGGGTGCTGGTGGGTG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATGGCCTCAGACCAACTaGCCCCGGAAACAGAAATCA +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKWPQTN*PRKQKS
Trigger: TGATTTCTGTTTCCGGGGCCAGTTGGTCTGAGGCCA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCCAGTTCAGGAACCTaGCCAAACTGCCCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPSSGT*PNCPFS
Trigger: TGAGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGCAGATTTGGCTGGTaGAAAAGGGGGCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGRFGW*KRGPRK
Trigger: CTTTCTGGGCCCCCTTTTCCACCAGCCAAATCTGCC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSRAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACAATAGACAACACACCTaGTTTCTGCTTTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHNRQHT*FLLSLV
Trigger: CACCAGGGAAAGCAGAAATCAGGTGTGTTGTCTATT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGCATATTTGCTCAGATaGGCCCTTGGGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: FACILLGGEERIWWDCEPAYLLR*ALGRPG
Trigger: CCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTGCCCTGTGGGCTTTTaGATATTTGCTCAGATGCGC +
Preference number: 2 (lower is better)
Translates to: DLGSGGQGDPHSMPQALACPVGF*IFAQMR
Trigger: GCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGAACCTGGCCAAACTaGCCCTTCTCACGGCACCTA +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGTWPN*PFSRHL
Trigger: TAGGTGCCGTGAGAAGGGGCAGTTTGGCCAGGTTCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGACTGCCTCCTGCCCGGTaGCTTGGCCGACGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRLPPAR*LGRRQA
Trigger: AGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAG...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTAGGATGGGACGGGACTaGATTCCGACACCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: FACILLGGEERIWWDCEPRMGRD*IPTPGA
Trigger: CGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCT...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACTAGGGAATATGGCTTaGATTCAAATCTCCCGTGAA +
Preference number: 2 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRELGNMA*IQISRE
Trigger: TTCACGGGAGATTTGAATCCAAGCCATATTCCCTAG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGATTTCTGCTTTCCCTaGTGGGAGACAGTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTDFCFP*WETVGG
Trigger: ACCTCCGACTGTCTCCCACCAGGGAAAGCAGAAATC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAACCTTGTCACGCGGATaGGGAAAAACCCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKTLSRG*GKTLFH
Trigger: GTGGAAAAGGGTTTTTCCCCATCCGCGTGACAAGGT...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATGTTTTGAACACAGGTaGGATGCTCACGGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKCFEHR*DAHGCC
Trigger: ACAACAGCCGTGAGCATCTCACCTGTGTTCAAAACA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCATATTTGCTCAGATaGGCCCTTGGGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHAYLLR*ALGRPG
Trigger: CCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGC...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTAAATCTCCCGTGAACTaGCGGTGCGGGAAACGGAGG +
Preference number: 2 (lower is better)
Translates to: FACILLGGEERIWWDCEPKSPVN*RCGKRR
Trigger: CCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTT...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCCCTGGTCTGGGCTTTaGCTCTTGAATCCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTPWSGL*LLNPFP
Trigger: GGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCACCTTGTCACGCGGATaGGGAAAAACCCTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTTLSRG*GKTLFH
Trigger: GTGGAAAAGGGTTTTTCCCCATCCGCGTGACAAGGT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGCAGATTTGGCTGGTaGAAAAGGGGGCCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGRFGW*KRGPRK
Trigger: CTTTCTGGGCCCCCTTTTCCACCAGCCAAATCTGCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGGATTTGGGCTCAGGTaGTCAGGGGGACCCTCATTC +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPGFGLR*SGGPSF
Trigger: GAATGAGGGTCCCCCTGACCACCTGAGCCCAAATCC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGACTCCTGGGGAGCCTCTaGGAACGGCCCTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRLLGSL*ERPFRG
Trigger: CCCCCTGAAGGGCCGTTCCCAGAGGCTCCCCAGGAG...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGATTCAAATCTCCCGTaGACTGCCGGTGCGGGAAAC +
Preference number: 2 (lower is better)
Translates to: FACILLGGEERIWWDCEPDSNLP*TAGAGN
Trigger: GTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGATTCAAATCTCCCGTaGACTGCCGGTGCGGGAAAC +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPDSNLP*TAGAGN
Trigger: GTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACATTCTGCTTGGGGGTaGGGAGAGAATCTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPHSAWG*GENLVG
Trigger: TCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGGTGAGGAGAGAATCTaGTGGGACTGTGAACCTGCC +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPGEERI*WDCEPA
Trigger: GGCAGGTTCACAGTCCCACCAGATTCTCTCCTCACC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCAGGGGAACCTTAGTGTaGGAGGATATAAGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTRGTLV*EDIRSV
Trigger: CACACTCCTTATATCCTCCCACACTAAGGTTCCCCT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACAACACACCTGATTTCTaGTTTCCCTGGTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHNTPDF*FPWWET
Trigger: TGTCTCCCACCAGGGAAAGCAGAAATCAGGTGTGTT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGACTCTGTCGTCCCAGGTaGCCCCGTTGGAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRLCRPR*PRWNPA
Trigger: AGCTGGGTTCCAACGGGGGCACCTGGGACGACAGAG...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGAATAGGCCCCGAGCCCTaGCCAGTTCAGGAACCTGGC +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRIGPEP*PVQEPG
Trigger: GCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTAT...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACTAGGGAATATGGCTTaGATTCAAATCTCCCGTGAA +
Preference number: 2 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKLGNMA*IQISRE
Trigger: TTCACGGGAGATTTGAATCCAAGCCATATTCCCTAG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGATTTCTGCTTTCCCTaGTGGGAGACAGTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPDFCFP*WETVGG
Trigger: ACCTCCGACTGTCTCCCACCAGGGAAAGCAGAAATC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGAGGAGGCCAGACTCCTTaGCCTCAGACCAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRGGQTP*PQTNWP
Trigger: GGGCCAGTTGGTCTGAGGCCAAGGAGTCTGGCCTCC...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGAATTCCCTGGGGATACTaGGGCAGAGCCCTCGAGGGG +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRIPWGY*GRALEG
Trigger: CCCCTCGAGGGCTCTGCCCCAGTATCCCCAGGGAAT...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCTAGGGAATATGGCTTaGATTCAAATCTCCCGTGAA +
Preference number: 2 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTLGNMA*IQISRE
Trigger: TTCACGGGAGATTTGAATCCAAGCCATATTCCCTAG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGAACAGCACTGCTGGCCTaGCCTCACCACCATCTACGC +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRTALLA*PHHHLR
Trigger: GCGTAGATGGTGGTGAGGCCAGGCCAGCAGTGCTGT...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAAACACACCTGATTTCTaGTTTCCCTGGTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPNTPDF*FPWWET
Trigger: TGTCTCCCACCAGGGAAAGCAGAAATCAGGTGTGTT...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACTTTTGCATGCATTCTaGTTGGGGGTGAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPLLHAF*LGVRRE
Trigger: TTCTCTCCTCACCCCCAAGCAGAATGCATGCAAAAG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR GCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACAACACACCTGATTTCTaGTTTCCCTGGTGGGAGACA +
Preference number: 2 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHNTPDF*FPWWET
Trigger: TGTCTCCCACCAGGGAAAGCAGAAATCAGGTGTGTT...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGACTGGATTCCGACACCTaGAGCGCTCTTTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRLDSDT*SALSRE
Trigger: TTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAG...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACTGCTTCGAGGCCTGTaGTGTGGGGGACACAGAGCT +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSLLRGL*CGGHRA
Trigger: AGCTCTGTGTCCCCCACACCACAGGCCTCGAAGCAG...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCAAATCTGGTGGGACTGTaGACCTGCCCTCATAGGCCC +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSNLVGL*TCPHRP
Trigger: GGGCCTATGAGGGCAGGTTCACAGTCCCACCAGATT...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACTGGATTCCGACACCTaGAGCGCTCTTTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSLDSDT*SALSRE
Trigger: TTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAG...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCAGAGGAGAGAATCTGGTaGGACTGTGAACCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSEERIW*DCEPAL
Trigger: GAGGGCAGGTTCACAGTCCCACCAGATTCTCTCCTC...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR TCA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCAAATAGACAACACACCTaGTTTCTGCTTTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSNRQHT*FLLSLV
Trigger: CACCAGGGAAAGCAGAAATCAGGTGTGTTGTCTATT...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp GCTCAGATGCGCCCTTGGGAGGCCGGGGCTGCCTCCTaGCCGGTGGCTTGGCCGACGCCAGGCTCCGCACAC +
Preference number: 3 (lower is better)
Translates to: AQMRPWEAGAAS*PVAWPTPGSAH
Trigger: GTGTGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp AGGGTCCCACCTGACCCTCCCGTGGCCTCTGCCCCCTaGCCCGAGATGCCTCTGTCGTCCCAGGTGCCCCCG +
Preference number: 3 (lower is better)
Translates to: RVPPDPPVASAP*PEMPLSSQVPP
Trigger: CGGGGGCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTGGGACCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCTCCTGCCCGGTGGCTaGGCCGACGCCAGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQLLPGG*ADARLR
Trigger: GCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGAG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCCCAGGTGCCCCCGTaGGAACCCAGCTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSQVPP*EPSWAE
Trigger: CTCAGCCCAGCTGGGTTCCAACGGGGGCACCTGGGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp ACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTaGACCCTCCTCGGCCCTCTCTGGAACTCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: TRRRSRGSNLRG*TLLGPLWNSSG
Trigger: GCCACTGGAGTTCCAGAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCTCCTGCCCGGTGGCTaGGCCGACGCCAGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: DLGSGGQGDPHSMPQALALLPGG*ADARLR
Trigger: GCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGAG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp ACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATaGGACGGGACTGGATTCCGACACCTGGAGCGCTCT +
Preference number: 3 (lower is better)
Translates to: THEGHSPTLRRG*DGTGFRHLERS
Trigger: AGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCCAGGTGCCCCCGTaGGAACCCAGCTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSQVPP*EPSWAE
Trigger: CTCAGCCCAGCTGGGTTCCAACGGGGGCACCTGGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCAGCAGGCCAGGGGTTaGGGGGCACCAATAAGGTGG +
Preference number: 3 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGQQARG*GAPIRW
Trigger: CCACCTTATTGGTGCCCCCAAACCCCTGGCCTGCTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACAAGGGGACCTGGGATaGGGGTACAGGGCACCCACC +
Preference number: 3 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREQGDLG*GYRAPT
Trigger: GGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATGCTCAGATGCGCCCTaGGGAGGCCGGGGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKCSDAP*GGRGCL
Trigger: GAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp ATATGGCTTGGATTCAAATCTCCCGTGAACTGCCGGTaGGGGAAACGGAGGGCGCTGTGGGTGGGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: IWLGFKSPVNCR*GKRRALWVGRA
Trigger: GGCCCGCCCCACCCACAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATCCAAGCCATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp CCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTaGATTCCGACACCTGGAGCGCTCTTTCCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: PQPDPPQRMGRD*IPTPGALFPGK
Trigger: TTTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp TACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTGTaGTGTGGGGGACACAGAGCTCGTCCTAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: YRAPTSTLLRGL*CGGHRARPRAV
Trigger: CACTGCTCTAGGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp TCCAACCTCCGTGGCTGCACCCTCCTCGGCCCTCTCTaGAACTCCAGTGGCTCAGCATGCCCCCGTGCATTT +
Preference number: 3 (lower is better)
Translates to: SNLRGCTLLGPL*NSSGSACPRAF
Trigger: AAATGCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCTCCTGCCCGGTGGCTaGGCCGACGCCAGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFLLPGG*ADARLR
Trigger: GCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGAG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCTGGGCTTTGCCTCTaGAATCCTTTCCCCACGGGC +
Preference number: 3 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSGLCL*NPFPTG
Trigger: GCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCAGCAGGCCAGGGGTTaGGGGGCACCAATAAGGTGG +
Preference number: 3 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHQQARG*GAPIRW
Trigger: CCACCTTATTGGTGCCCCCAAACCCCTGGCCTGCTG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATAAGAAAGCCTGGGTCTaGCCCTGTGGGCTTTTGCAT +
Preference number: 3 (lower is better)
Translates to: GPMRATARPSAEDGTGLDKKAWV*PCGLLH
Trigger: ATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTT...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCCCTGGTCTGGGCTTaGCCTCTTGAATCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSLVWA*PLESFP
Trigger: GGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp TGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTaGCCAGTTCAGGAACCTGGCCAAACTGCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: WDCEPALIGPEP*PVQEPGQTAPS
Trigger: AGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAACGCTCACACACACCTaGTCACGCGGATGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRETLTHT*SRGWGK
Trigger: TTTTCCCCATCCGCGTGACAAGGTGTGTGTGAGCGT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACAGATGCTCACGGCTGTaGTCACACTCCCTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRCSRL*SHSLVW
Trigger: CCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGATGCTCACGGCTGTaGTCACACTCCCTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRCSRL*SHSLVW
Trigger: CCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp CCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGAACCTaGCCAAACTGCCCCTTCTCACGGCACCTACTACTT +
Preference number: 3 (lower is better)
Translates to: PHRPRALPSSGT*PNCPFSRHLLL
Trigger: AAGTAGTAGGTGCCGTGAGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp GCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTaGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCC +
Preference number: 3 (lower is better)
Translates to: ACILLGGEERIW*DCEPALIGPEP
Trigger: GGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGGGCTTTTGCATATTaGCTCAGATGCGCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREWAFAY*LRCALG
Trigger: CCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp CCCCGAGCCCTGCCCAGTTCAGGAACCTGGCCAAACTaGCCCTTCTCACGGCACCTACTACTTTCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: PRALPSSGTWPN*PFSRHLLLSGK
Trigger: CTTTCCTGAAAGTAGTAGGTGCCGTGAGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGGCAGGGCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp CCCCAGACAACCACCGGGAATGAAATATTGCACTCATaGGAGACAAAGGGTAGGCTCGGGGGTGGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: PQTTTGNEILHS*ETKGRLGGGSG
Trigger: CCCGCTCCCACCCCCGAGCCTACCCTTTGTCTCGCATGAGTGCAATATTTCATTCCCGGTGGTTGTCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp GTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTaGGCTTTGCCTCTTGAATCCTTTCCCCACGGGCCC +
Preference number: 3 (lower is better)
Translates to: VRCSRLLSHSLV*ALPLESFPHGP
Trigger: GGGCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGTGGGCTTTTGCATATTaGCTCAGATGCGCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQWAFAY*LRCALG
Trigger: CCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCA...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAGATGCTCACGGCTGTaGTCACACTCCCTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARCSRL*SHSLVW
Trigger: CCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATTGCATGCATTCTGCTaGGGGGTGAGGAGAGAATCT +
Preference number: 3 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRELHAFC*GVRRES
Trigger: AGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCAAGGGGACCTGGGATaGGGGTACAGGGCACCCACC +
Preference number: 3 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTQGDLG*GYRAPT
Trigger: GGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTTGCCCTGTGGGCTTTaGCATATTTGCTCAGATGCG +
Preference number: 3 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKLPCGL*HICSDA
Trigger: CGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTCCCTGGTCTGGGCTTaGCCTCTTGAATCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: DLGSGGQGDPHSMPQALASLVWA*PLESFP
Trigger: GGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGGA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR TCA 72 bp GGTACTAGGGAATATGGCTTGGATTCAAATCTCCCGTaGACTGCCGGTGCGGGAAACGGAGGGCGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GTREYGLDSNLP*TAGAGNGGRCG
Trigger: CCCACAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATCCAAGCCATATTCCCTAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp ACCGTAAGAAAGCCTGGGTCTTGCCCTGTGGGCTTTTaGATATTTGCTCAGATGCGCCCTTGGGAGGCCGGG +
Preference number: 3 (lower is better)
Translates to: TVRKPGSCPVGF*IFAQMRPWEAG
Trigger: CCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTTACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATGGGCTTTTGCATATTaGCTCAGATGCGCCCTTGGG +
Preference number: 3 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKWAFAY*LRCALG
Trigger: CCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAAAGAAAGCCTGGGTCTaGCCCTGTGGGCTTTTGCAT +
Preference number: 3 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKKKAWV*PCGLLH
Trigger: ATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTT...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTTGGAGGCCAGACTCCTaGGCCTCAGACCAACTGGCC +
Preference number: 3 (lower is better)
Translates to: FACILLGGEERIWWDCEPWRPDS*ASDQLA
Trigger: GGCCAGTTGGTCTGAGGCCAAGGAGTCTGGCCTCCA...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp CATTCTATGCCCCAAGCACTAGCCCATCAGGCCATCTaGCCCACCAAGTGGCACAGAAAAGGCCGAGAAACC +
Preference number: 3 (lower is better)
Translates to: HSMPQALAHQAI*PTKWHRKGRET
Trigger: GGTTTCTCGGCCTTTTCTGTGCCACTTGGTGGGGCAGATGGCCTGATGGGCTAGTGCTTGGGGCATAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGATGCTCAGATGCGCCCTaGGGAGGCCGGGGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRCSDAP*GGRGCL
Trigger: GAGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCA...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTTCTGGGCTTTGCCTCTaGAATCCTTTCCCCACGGGC +
Preference number: 3 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTSGLCL*NPFPTG
Trigger: GCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGA...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGAAAAGGGGTGTCTTTaGCATGCATTCTGCTTGGGG +
Preference number: 3 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKEKGCL*HAFCLG
Trigger: CCCCAAGCAGAATGCATGCAAAAGACACCCCTTTTC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR GCA 72 bp AACCACCTCCCCAGACAACCACCGGGAATGAAATATTaGACTCATGCGAGACAAAGGGTAGGCTCGGGGGTG +
Preference number: 3 (lower is better)
Translates to: NHLPRQPPGMKY*THARQRVGSGV
Trigger: CACCCCCGAGCCTACCCTTTGTCTCGCATGAGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp GGTGGGAGACAGTCGGAGGTACTAGGGAATATGGCTTaGATTCAAATCTCCCGTGAACTGCCGGTGCGGGAA +
Preference number: 3 (lower is better)
Translates to: GGRQSEVLGNMA*IQISRELPVRE
Trigger: TTCCCGCACCGGCAGTTCACGGGAGATTTGAATCCAAGCCATATTCCCTAGTACCTCCGACTGTCTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACAAGAAAGCCTGGGTCTaGCCCTGTGGGCTTTTGCAT +
Preference number: 3 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHKKAWV*PCGLLH
Trigger: ATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTCTT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTACGCTCACACACACCTaGTCACGCGGATGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFTLTHT*SRGWGK
Trigger: TTTTCCCCATCCGCGTGACAAGGTGTGTGTGAGCGT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTTGCATGCATTCTGCTaGGGGGTGAGGAGAGAATCT +
Preference number: 3 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTLHAFC*GVRRES
Trigger: AGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CCA 72 bp CTGGGTGGAGGCCAGACTCCTTGGCCTCAGACCAACTaGCCCCGGAAACAGAAATCAGATATAGGTTGGAAT +
Preference number: 3 (lower is better)
Translates to: LGGGQTPWPQTN*PRKQKSDIGWN
Trigger: ATTCCAACCTATATCTGATTTCTGTTTCCGGGGCCAGTTGGTCTGAGGCCAAGGAGTCTGGCCTCCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTTGCCCTGTGGGCTTTaGCATATTTGCTCAGATGCG +
Preference number: 3 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHLPCGL*HICSDA
Trigger: CGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACGCTCACACACACCTaGTCACGCGGATGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPTLTHT*SRGWGK
Trigger: TTTTCCCCATCCGCGTGACAAGGTGTGTGTGAGCGT...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACGTCTTTGTCTTGTTTaGAACACAGGTGAGATGCTC +
Preference number: 3 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKRLCLV*NTGEML
Trigger: GAGCATCTCACCTGTGTTCAAAACAAGACAAAGACG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGATGGAGGCCAGACTCCTaGGCCTCAGACCAACTGGCC +
Preference number: 3 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRWRPDS*ASDQLA
Trigger: GGCCAGTTGGTCTGAGGCCAAGGAGTCTGGCCTCCA...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGATCTGGGCTTTGCCTCTaGAATCCTTTCCCCACGGGC +
Preference number: 3 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRSGLCL*NPFPTG
Trigger: GCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGA...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCAGAGGGCCAGGCAGATTaGGCTGGTGGAAAAGGGGGC +
Preference number: 3 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSEGQAD*AGGKGG
Trigger: GCCCCCTTTTCCACCAGCCAAATCTGCCTGGCCCTC...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGATTGCCCTGTGGGCTTTaGCATATTTGCTCAGATGCG +
Preference number: 3 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVRLPCGL*HICSDA
Trigger: CGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAA...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp CTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTTAACCACGGTGAGAGAAAAGGGGTGTCTTTaGCATGCATTCTGCTTGGGG +
Preference number: 3 (lower is better)
Translates to: LSLHIYRNRAFVTLTTVREKGCL*HAFCLG
Trigger: CCCCAAGCAGAATGCATGCAAAAGACACCCCTTTTC...TCTCACCGTGGTTAACGTGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR-3UTR CAA 90 bp AAAAATCCAACCATCCCCTTAGTTTACACATTTACAGGAATCGTGCCTTCGTCACGTCTTTGTCTTGTTTaGAACACAGGTGAGATGCTC +
Preference number: 3 (lower is better)
Translates to: KNPTIPLVYTFTGIVPSSRLCLV*NTGEML
Trigger: GAGCATCTCACCTGTGTTCAAAACAAGACAAAGACG...TGACGAAGGCACGATTCCTGTAAATGTGTAAACTAAGGGGATGGTTGGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGCTCCAGGCACTCGCTaGAGGCCGGCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPAPGTR*RPARAP
Trigger: CGGAGCCCGGGCCGGCCTTCAGCGAGTGCCTGGAGC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGAGGCCGCTGGGGGCTaGGGGTCCGGTGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDEAAGG*GSGGLS
Trigger: CGACAGCCCACCGGACCCTCAGCCCCCAGCGGCCTC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDRAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGCTGCTGCTGGGGCCTaGGCCCGCACCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSAAAGA*ARTGAS
Trigger: GCTGGCACCGGTGCGGGCTCAGGCCCCAGCAGCAGC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGTCCTTGCCCTCCCCTaGCACGGCACAGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPVLALP*HGTGLG
Trigger: GCCGAGGCCTGTGCCGTGGCAGGGGAGGGCAAGGAC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCCGCCGCTCGCCCTTaGCCTCGGCCTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAAARP*PRPSGG
Trigger: CCCACCTGAAGGCCGAGGGCAAGGGCGAGCGGCGGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGGGGCAGGTTCTGGTaGAGGGCAGGGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGGRFW*RAGCPR
Trigger: CCTGGGGCACCCTGCCCTGCACCAGAACCTGCCCCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTGGTCGTGCTTGCGCTaGAGGCGGGCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPWSCLR*RRASSR
Trigger: GCGGGAGCTGGCCCGCCTGCAGCGCAAGCACGACCA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCCTGGCCCGCGTACTTaGGCAGCGCCAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPPGPRT*AAPAPW
Trigger: CCATGGGGCTGGCGCTGCGCAAGTACGCGGGCCAGG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAAGTGCACGGGGCGCTaGGCCGAGGTGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPKCTGR*AEVVGW
Trigger: CCACCCCACCACCTCGGCCCAGCGCCCCGTGCACTT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGGCTGAGGGTCCGGTaGGCTGTCGCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGLRVR*AVAGQV
Trigger: GACCTGCCCAGCGACAGCCCACCGGACCCTCAGCCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCACGGAGGGCTGGGCTaGGCACCTGGGTGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPHGGLG*APGCLP
Trigger: CGGGAGACACCCAGGTGCCCAGCCCAGCCCTCCGTG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCCTGCCCGGTGGCTTaGCCGACGCCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSCPVA*PTPGSA
Trigger: TGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGGCCTCCCTGGCCCCTaGGAGCAGCCCGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGGLPGP*EQPGLL
Trigger: GAGGAGCCCGGGCTGCTCTCAGGGGCCAGGGAGGCC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGGGTGCGTGGAGGCTaGCGAGCCCAGGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGVRGG*RAQAAG
Trigger: ACCAGCAGCCTGGGCTCGGCAGCCTCCACGCACCCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCCGCTGGCCGCTCCTTaGCCTCAGCGGCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSPLAAP*PQRPCP
Trigger: CGGGCAAGGCCGCTGAGGGCAAGGAGCGGCCAGCGG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGCGGTGCCCTGGCCTaGCTGGACACCCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGGALA*LDTPWG
Trigger: CCCCCATGGGGTGTCCAGGCAGGCCAGGGCACCGCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTGGTCGTGCTTGCGCTaGAGGCGGGCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDWSCLR*RRASSR
Trigger: GCGGGAGCTGGCCCGCCTGCAGCGCAAGCACGACCA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGGCAGCGGGAACTCTaGCTGGCCCGCGTACTTGCG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGQREL*LARVLA
Trigger: CGCAAGTACGCGGGCCAGGCAGAGTTCCCGCTGCCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGCAGCAGCGTGGGCTaGGGCGGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGSSVG*GGRLRR
Trigger: CCTGCGCAACCTGCCGCCCCAGCCCACGCTGCTGCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCAGGCCTCGGCGGCCTaGAAGGGGCGGCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSQASAA*KGRPLS
Trigger: CGACAAGGGCCGCCCCTTCCAGGCCGCCGAGGCCTG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGTCCAGCGCGTGTGTaGAACGGGGCCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGPARV*NGAHRH
Trigger: GTGGCGGTGGGCCCCGTTCCACACACGCGCTGGACC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATAAGTGCACGGGGCGCTaGGCCGAGGTGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDKCTGR*AEVVGW
Trigger: CCACCCCACCACCTCGGCCCAGCGCCCCGTGCACTT...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGCCGCTGCAGGGGTTaGCTGTGGGCGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGRCRG*LWAAAL
Trigger: CAGCGCAGCCGCCCACAGCCAACCCCTGCAGCGGCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCTTGCCATCGCTCCTaGGGAGCGGCCCCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSCHRS*GAAPWD
Trigger: GTCCCACGGGGCCGCTCCCCAGGAGCGATGGCAAGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCGCTCACTGGCCAGCTaGCTGCCCTCCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPRSLAS*LPSSRQ
Trigger: CTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTGAGCG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGAGGGCCGCTGCCCTTaGAGCGCAGGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSEGRCP*SAGPRA
Trigger: AGCCCGAGGCCCTGCGCTCCAAGGGCAGCGGCCCTC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCTCCAGGCACTCGCTaGAGGCCGGCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAPGTR*RPARAP
Trigger: CGGAGCCCGGGCCGGCCTTCAGCGAGTGCCTGGAGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCCAGCGGGTCCTGGTaGCCAGGCCGGGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPSGSW*PGRAQS
Trigger: GGACTGTGCCCGGCCTGGTCACCAGGACCCGCTGGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGATGCAGCTGGCCTTaGGGCCACCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGCSWP*GHPGPP
Trigger: TGGTGGGCCTGGGTGGCCTCAAGGCCAGCTGCATCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCAGGTCCCCCAGGTTaGTGGTGGCGGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAGPPG*WWRPPR
Trigger: CCTTGGTGGCCGCCACCATCAACCTGGGGGACCTGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGAGGCCGCTGGGGGCTaGGGGTCCGGTGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQEAAGG*GSGGLS
Trigger: CGACAGCCCACCGGACCCTCAGCCCCCAGCGGCCTC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTGCGTGTGGCCAGCGTaGTGGACAGGGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPCVWPA*WTGPRS
Trigger: AGAACGGGGCCCTGTCCATCACGCTGGCCACACGCA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGCTGGGCATGCGCGTaGGGGCCGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERWACA*GPLPLE
Trigger: CTCCAAGGGCAGCGGCCCTCACGCGCATGCCCAGCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCTGCTGCTGGGGCCTaGGCCCGCACCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAAAGA*ARTGAS
Trigger: GCTGGCACCGGTGCGGGCTCAGGCCCCAGCAGCAGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGCCGGGGACCCATaGGGGCCACAGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRAGDP*GPQPDP
Trigger: AGGGTCGGGCTGTGGCCCTCATGGGTCCCCGGCCCG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGGGGCAGGTTCTGGTaGAGGGCAGGGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGGRFW*RAGCPR
Trigger: CCTGGGGCACCCTGCCCTGCACCAGAACCTGCCCCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCCTTGGGCTGTGGGTaGCGTGTGGCCCCAGACACC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPLGCG*RVAPDT
Trigger: GGTGTCTGGGGCCACACGGCACCCACAGCCCAAGGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCCGCTCCAGGGTGGTaGCCACCTTGGCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPAPGW*PPWPSP
Trigger: CGGTGAAGGCCAAGGTGGGCACCACCCTGGAGCGGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGCGCGTGAGGGCCGCTaGCCTTGGAGCGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGAREGR*PWSAGP
Trigger: AGGCCCTGCGCTCCAAGGGCAGCGGCCCTCACGCGC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCTGAGCCCGCACCGGTaGCAGCCACCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGLSPHR*QPPWPW
Trigger: CCAGGGCCACGGTGGCTGGCACCGGTGCGGGCTCAG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCCGTGAACTGCCGGTaGGGGAAACGGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPVNCR*GKRRAL
Trigger: CAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCCAACCTCCGTGGCTaGACCCTCCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSNLRG*TLLGPL
Trigger: GAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCAGGCCTCGGCGGCCTaGAAGGGGCGGCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGQASAA*KGRPLS
Trigger: CGACAAGGGCCGCCCCTTCCAGGCCGCCGAGGCCTG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAGCAAGGTGGCAGCTTaGTGGGGCCTGCAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSKVAA*WGLQRV
Trigger: CACCCGCTGCAGGCCCCACCAAGCTGCCACCTTGCT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAAGTGCACGGGGCGCTaGGCCGAGGTGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSKCTGR*AEVVGW
Trigger: CCACCCCACCACCTCGGCCCAGCGCCCCGTGCACTT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCCGCTGCCTTCCCCTaGGGTCCCCGCTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSAAFP*GPRSVG
Trigger: CCCTACCGAGCGGGGACCCCAGGGGAAGGCAGCGGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGGCTGAGGGTCCGGTaGGCTGTCGCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGLRVR*AVAGQV
Trigger: GACCTGCCCAGCGACAGCCCACCGGACCCTCAGCCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCACGGAGGGCTGGGCTaGGCACCTGGGTGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGHGGLG*APGCLP
Trigger: CGGGAGACACCCAGGTGCCCAGCCCAGCCCTCCGTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGGTCCTGCCGGTCCTaGCACTTGCGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSRSCRS*HLRLRA
Trigger: GGCCCGGAGCCGCAAGTGCCAGGACCGGCAGGACCT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCACCAGGCGCCCGGTaGTGGGGTCGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSPGAR*WGRRCP
Trigger: CGGGCACCTACGACCCCACCACCGGGCGCCTGGTGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGTCCCTGGCGCACGTaGGAGGCATCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGPWRT*EASAVG
Trigger: GCCCACCGCAGATGCCTCCCACGTGCGCCAGGGACC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCCTGCCCGGTGGCTTaGCCGACGCCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSCPVA*PTPGSA
Trigger: TGCGGAGCCTGGCGTCGGCCAAGCCACCGGGCAGGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAGGATCCAACCTCCGTaGCTGCACCCTCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPRIQPP*LHPPRP
Trigger: GGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCGGGGCCTGCGCTGCTaGGATAGTCGAGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPRGLRC*DSRGPL
Trigger: TAAAGGGCCTCGACTATCTCAGCAGCGCAGGCCCCG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCCAGCGGGTCCTGGTaGCCAGGCCGGGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPSGSW*PGRAQS
Trigger: GGACTGTGCCCGGCCTGGTCACCAGGACCCGCTGGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGTTGGGAGGAGGCCCCTaGCGAGGGCCCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQLGGGP*RGPLLP
Trigger: GGGGAGCAGGGGCCCTCGTCAGGGGCCTCCTCCCAA...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGCAGGTCCCCCAGGTTaGTGGTGGCGGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGAGPPG*WWRPPR
Trigger: CCTTGGTGGCCGCCACCATCAACCTGGGGGACCTGC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTGCGCGTGGCCCTCTTaGGGCGCTCACTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGCAWPS*GAHWPA
Trigger: AGCTGGCCAGTGAGCGCCTCAAGAGGGCCACGCGCA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTATCCTCCTTGGGGATaGGCACGGGCAGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDYPPWG*ARAARP
Trigger: GGGACGGGCTGCCCGTGCTCATCCCCAAGGAGGATA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCGCTGGGCATGCGCGTaGGGGCCGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRWACA*GPLPLE
Trigger: CTCCAAGGGCAGCGGCCCTCACGCGCATGCCCAGCG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCGCTGGGCATGCGCGTaGGGGCCGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRWACA*GPLPLE
Trigger: CTCCAAGGGCAGCGGCCCTCACGCGCATGCCCAGCG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGTCTCGATCCCGGCTaGAGGAGCCCATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGLDPG*RSPWGG
Trigger: CCCACCCCATGGGCTCCTGCAGCCGGGATCGAGACC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGTCTCGATCCCGGCTaGAGGAGCCCATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGLDPG*RSPWGG
Trigger: CCCACCCCATGGGCTCCTGCAGCCGGGATCGAGACC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCTTGTGCCGCTCCTTaGCACCGTCCTCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDACAAP*HRPPLP
Trigger: CGGCAGAGGAGGACGGTGGCAAGGAGCGGCACAAGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGGTCACCACCCCCGTaGCAGGCCGCCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERSPPP*QAAPAC
Trigger: GCATGCTGGGGCGGCCTGGCACGGGGGTGGTGACCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCAGGTGCCGGTCCTTaGCCTCCCCTGCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPGAGP*PPLPRH
Trigger: GTGCCGTGGCAGGGGAGGGCAAGGACCGGCACCTGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGCGGTGCCCTGGCCTaGCTGGACACCCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGGALA*LDTPWG
Trigger: CCCCCATGGGGTGTCCAGGCAGGCCAGGGCACCGCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCACCTCCCCGTCGCCGTaGGTGGTGTCGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSTSPSP*VVSCSL
Trigger: CAGGGAGCACGACACCACGCACGGCGACGGGGAGGT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGGTCCCCAGGGCAGCTaGTCGGTGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGGPQGS*SVGGSG
Trigger: CCCGGATCCACCCACCGAGCAGCTGCCCTGGGGACC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTGCTGCCGGAGGAGCTaGGGCCTCGAGTACACAGGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDCCRRS*GLEYTG
Trigger: CCCTGTGTACTCGAGGCCGCAGCTCCTCCGGCAGCA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGACTCCCTGCTCGCTaGTCCAGGACTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGLPAR*SRTWEE
Trigger: CTCCTCCCAAGTCCTGGAGCAGCGAGCAGGGAGTCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGCACCCGGACTCCCTaGTCGCTGCTCCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGTRTP*SLLQDL
Trigger: CAAGTCCTGGAGCAGCGAGCAGGGAGTCCGGGTGCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCCTCAGGGGCCGGCTaGTCCCCCTCGTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSSGAG*SPSSSR
Trigger: CCTTGAGGACGAGGGGGAGCAGCCGGCCCCTGAGGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCCTCAGGGGCCGGCTaGTCCCCCTCGTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSSGAG*SPSSSR
Trigger: CCTTGAGGACGAGGGGGAGCAGCCGGCCCCTGAGGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCGCATCCCCACCTCCTaGGTGTCCAGCCGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDRIPTS*VSSRSM
Trigger: CATCGACCGGCTGGACACGCAGGAGGTGGGGATGCG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCACTGGCCAGCTGGCTaGCCTCCTCACGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGHWPAG*PPHGRR
Trigger: TCGCCTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGCCTTCCGCTTGGTCTaGGCCACCGCGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGAFRLV*ATADQL
Trigger: GAGCTGGTCCGCGGTGGCGCAGACCAAGCGGAAGGC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGTGTGGCCACGCTGTaGACGGGGAACAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGVATL*TGNRAS
Trigger: CGAGGCCCTGTTCCCCGTGCACAGCGTGGCCACACC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTATAGGCCCCGAGCCCTaGCCAGTTCAGGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPIGPEP*PVQEPG
Trigger: GCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTAT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGGAGCTGGGGCCGCTaGGGTGCGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRSWGR*GAWRLP
Trigger: CGGCAGCCTCCACGCACCCCAGCGGCCCCAGCTCCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGGAGCTGGGGCCGCTaGGGTGCGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRSWGR*GAWRLP
Trigger: CGGCAGCCTCCACGCACCCCAGCGGCCCCAGCTCCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGGCAGCAGCGTGGGCTaGGGCGGCAGGTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKGSSVG*GGRLRR
Trigger: CCTGCGCAACCTGCCGCCCCAGCCCACGCTGCTGCC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAGCGGTCGAAGTCCTTaGGGCCCTTCTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSGRSP*GPSAGS
Trigger: GCTCCCTGCAGAAGGGCCCCAAGGACTTCGACCGCT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCAGGCCTCGGCGGCCTaGAAGGGGCGGCCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQQASAA*KGRPLS
Trigger: CGACAAGGGCCGCCCCTTCCAGGCCGCCGAGGCCTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCGTGGTCGGGGGCCATaGTTCCCTCCAGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGRGRGP*FPPGAG
Trigger: ACCGGCACCTGGAGGGAACCATGGCCCCCGACCACG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGCAGCAGCTCGCGGCTaGCAAGCCCCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSAAARG*QAPGGH
Trigger: ATGACCGCCTGGGGCTTGCCAGCCGCGAGCTGCTGC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACTTGTGGGCTCAGGCTaGGCCCCCGGGGCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRELVGSG*APGAVV
Trigger: AACCACCGCCCCGGGGGCCCAGCCTGAGCCCACAAG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCAGGAATGTCCTTGTaGGCTCAGGCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAGMSL*AQAGPP
Trigger: CGGGGGCCCAGCCTGAGCCCACAAGGACATTCCTGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCTGGGTGGCCTCCCTaGCCCCTGAGAGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPGWPP*PLRAAR
Trigger: CCGGGCTGCTCTCAGGGGCCAGGGAGGCCACCCAGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCCTGGGTGGCCTCCCTaGCCCCTGAGAGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHPGWPP*PLRAAR
Trigger: CCGGGCTGCTCTCAGGGGCCAGGGAGGCCACCCAGG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATCCGCTGCCTTCCCCTaGGGTCCCCGCTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESAAFP*GPRSVG
Trigger: CCCTACCGAGCGGGGACCCCAGGGGAAGGCAGCGGA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTCCGCTGCCTTCCCCTaGGGTCCCCGCTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGSAAFP*GPRSVG
Trigger: CCCTACCGAGCGGGGACCCCAGGGGAAGGCAGCGGA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGCAGGGGGACTGTGCTaGGGGGCCCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHAGGLC*GAQRPL
Trigger: CAGCGGCCTCTGGGCCCCCCAGCACAGTCCCCCTGC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACAGCTGGGCCACCCTGTaGGCCACGGAGGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSWATL*ATEGAS
Trigger: GCTGGCGCCCTCCGTGGCCCACAGGGTGGCCCAGCT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGCTGGGCCACCCTGTaGGCCACGGAGGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQSWATL*ATEGAS
Trigger: GCTGGCGCCCTCCGTGGCCCACAGGGTGGCCCAGCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCACGGAGGGCTGGGCTaGGCACCTGGGTGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGHGGLG*APGCLP
Trigger: CGGGAGACACCCAGGTGCCCAGCCCAGCCCTCCGTG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGGTGGTGCCCACCTTaGCCTTCACCGACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGWCPP*PSPTAS
Trigger: AGAGGCGGTCGGTGAAGGCCAAGGTGGGCACCACCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCACCGCCTTCCGCTTaGTCTGCGCCACCGCGGACC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPPPSA*SAPPRT
Trigger: GGTCCGCGGTGGCGCAGACCAAGCGGAAGGCGGTGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGCACATAGCTGGGGCTaGGCAGGGGCCGCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGAHSWG*AGAARA
Trigger: AGCTCGGGCGGCCCCTGCCCAGCCCCAGCTATGTGC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCGGGTGCACATAGCTaGGGCTGGGCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPGAHS*GWAGAA
Trigger: GGCGGCCCCTGCCCAGCCCCAGCTATGTGCACCCGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCGGGTGCACATAGCTaGGGCTGGGCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPGAHS*GWAGAA
Trigger: GGCGGCCCCTGCCCAGCCCCAGCTATGTGCACCCGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGGTCCTGCCGGTCCTaGCACTTGCGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERSCRS*HLRLRA
Trigger: GGCCCGGAGCCGCAAGTGCCAGGACCGGCAGGACCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCCAGGCGCCCGGTGGTaGGGTCGTAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHPGARW*GRRCPP
Trigger: TGGCGGGCACCTACGACCCCACCACCGGGCGCCTGG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGGAGGCATCTGCGGTaGGCGGCTCAGCATAGGATG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGRHLR*AAQHRM
Trigger: CATCCTATGCTGAGCCGCCCACCGCAGATGCCTCCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGCACGCGGGAGGACTaGGCTTCTCGGCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSTRED*ASRRAA
Trigger: GGCCGCCCGCCGAGAAGCCCAGTCCTCCCGCGTGCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCAGGTTCTTCATGGCTaGGACCTCGTCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGQVLHG*DLVRRR
Trigger: GCGCCGCCGGACGAGGTCTCAGCCATGAAGAACCTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCGGCCGTGGACTGCTaGCCCTCCCCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSAVDC*PSPFFS
Trigger: GGAAAAGAATGGGGAGGGTCAGCAGTCCACGGCCGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCCGTGCAGGGCTCCGTaGACTCTCGTCTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPPCRAP*TLVSLM
Trigger: CATGAGAGAGACGAGAGTTCACGGAGCCCTGCACGG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGCAGGCAGCGAGCTTaGGTGTTTGCGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGRQRA*VFALPR
Trigger: CCGAGGAAGCGCAAACACTCAAGCTCGCTGCCTGCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGCGCCAGCCCGCCCTaGCAGCTGCTCTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGASPP*QLLFLH
Trigger: GTGTAAGAAGAGCAGCTGTCAGGGCGGGCTGGCGCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGTGGCTGCAGGGTCCTaGCGCTGCCCGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGVAAGS*RCPRTA
Trigger: TGCTGTACGCGGGCAGCGTCAGGACCCTGCAGCCAC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGCTGGCCAGGCTGCTaGAGGAGTCGGCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESWPGC*RSRRGS
Trigger: GCTTCCGCGCCGACTCCTTCAGCAGCCTGGCCAGCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGTGGACACGGAGCCTaGGGAGGAGGAGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGGHGA*GGGGGR
Trigger: TCGTCCACCTCCTCCTCCTCAGGCTCCGTGTCCACC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGTCCAGCCAGCAGGTaGGAAACAGGCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGPASR*ETGPNG
Trigger: CCCATTGGGGCCTGTTTCTCACCTGCTGGCTGGACC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCGCTCCGACAGCAGATaGGGCGGCGGCGCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGRSDSR*GGGAKS
Trigger: CGACTTTGCGCCGCCGCCGCATCTGCTGTCGGAGCG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGGGTGCGTGGAGGCTaGCGAGCCCAGGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGVRGG*RAQAAG
Trigger: ACCAGCAGCCTGGGCTCGGCAGCCTCCACGCACCCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGGTCACCACCCCCGTaGCAGGCCGCCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRSPPP*QAAPAC
Trigger: GCATGCTGGGGCGGCCTGGCACGGGGGTGGTGACCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCGTCAGGGCCCCCGTaGAGCTGCAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPSGPP*SCRQGK
Trigger: CTTCCCCTGCCTGCAGCTGCACGGGGGCCCTGACGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGAGGCCTCGGGGCCTaGGCTGCTGAGATAGTCGAG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGGLGA*AAEIVE
Trigger: CTCGACTATCTCAGCAGCGCAGGCCCCGAGGCCTCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGCAGAAGAGCCGCCTaGTGCAGGCCACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGRRAA*CRPLPK
Trigger: CTTTGGCAGTGGCCTGCAGCAGGCGGCTCTTCTGCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTGTCGTGCTCCCTGCTaGGGGCACAGTCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSCRAPC*GHSPAS
Trigger: AGAGGCCGGACTGTGCCCGCAGCAGGGAGCACGACA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCCAAGGCCACTGCAATaGCCACAGGGGGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSPRPLQ*PQGAAA
Trigger: TGCGGCAGCCCCCTGTGGGCATTGCAGTGGCCTTGG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGTCCCCAGGGCAGCTaGTCGGTGGGTGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGPQGS*SVGGSG
Trigger: CCCGGATCCACCCACCGAGCAGCTGCCCTGGGGACC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGGGGGCAGGTTCTGGTaGAGGGCAGGGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKGGRFW*RAGCPR
Trigger: CCTGGGGCACCCTGCCCTGCACCAGAACCTGCCCCC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGGGTGTCTCCCGGCTaGCGTGGCCCTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGWVSPG*RGPWAV
Trigger: CACAGCCCAAGGGCCACGGCAGCCGGGAGACACCCA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCACACTGGCCCCGGTGTaGAGCAGCAGCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGTLAPV*SSSPAS
Trigger: GGAAGCAGGGCTGCTGCTGCACACCGGGGCCAGTGT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGCCCTTGCCCTGCTTaGCGGCCTTGTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGPCPA*RPCASP
Trigger: AGGTGAAGCACAAGGCCGGCAAGCAGGGCAAGGGCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTGGATTTGCTGCTGCTaGTGGGGCCTGAGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDWICCC*WGLSPH
Trigger: GTGCGGGCTCAGGCCCCAGCAGCAGCAGCAAATCCA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCCAACCTCCGTGGCTaGACCCTCCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSNLRG*TLLGPL
Trigger: GAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGGGCAGCTGCTCGGTaGGTGGATCCGGGCGAACTC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSRAAAR*VDPGEL
Trigger: GAGTTCGCCCGGATCCACCCACCGAGCAGCTGCCCT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCAGGGCAGCTGCTCGGTaGGTGGATCCGGGCGAACTC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGRAAAR*VDPGEL
Trigger: GAGTTCGCCCGGATCCACCCACCGAGCAGCTGCCCT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCCGGCCCCCGTACATaGGGGGCCACAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPGPRT*GATVTP
Trigger: AGGCGTCACTGTGGCCCCCCATGTACGGGGGCCGGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCTTCGGGCTTCCGCTaGAACTGGGCGGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSSGFR*NWAALC
Trigger: GCAGAGGGCCGCCCAGTTCCAGCGGAAGCCCGAAGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTTGTGGGCTCAGGCTaGGCCCCCGGGGCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLVGSG*APGAVV
Trigger: AACCACCGCCCCGGGGGCCCAGCCTGAGCCCACAAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGCCCCTCTAGTGGGCTaGGGTCCGCTGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGAPLVG*GPLPSP
Trigger: AGGGGAAGGCAGCGGACCCCAGCCCACTAGAGGGGC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAATGAGCCTGGCCGGTaGCCTCGGGGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKNEPGR*PRGPLP
Trigger: AGGCAGGGGGCCCCGAGGCCACCGGCCAGGCTCATT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGGCTGAGGGTCCGGTaGGCTGTCGCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGLRVR*AVAGQV
Trigger: GACCTGCCCAGCGACAGCCCACCGGACCCTCAGCCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCTGCGCTGGGGCAGTaGAGCTGTCCAGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAALGQ*SCPGQR
Trigger: CCGCTGGCCTGGACAGCTCCACTGCCCCAGCGCAGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATACCTTGGGTTTCAGCTaGGCCACCCTGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDTLGFS*ATLWAT
Trigger: CGTGGCCCACAGGGTGGCCCAGCTGAAACCCAAGGT...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGTCTCCCGGCTGCCGTaGCCCTTGGGCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQVSRLP*PLGCGC
Trigger: GCACCCACAGCCCAAGGGCCACGGCAGCCGGGAGAC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGTCTCCCGGCTGCCGTaGCCCTTGGGCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKVSRLP*PLGCGC
Trigger: GCACCCACAGCCCAAGGGCCACGGCAGCCGGGAGAC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCTGGGCTGGGCACCTaGGTGTCTCCCGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAGLGT*VSPGCR
Trigger: ACGGCAGCCGGGAGACACCCAGGTGCCCAGCCCAGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCAGCCACGGAGGGCTaGGCTGGGCACCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAATEG*AGHLGV
Trigger: GACACCCAGGTGCCCAGCCCAGCCCTCCGTGGCTGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCACTGCCTGCCTCCTaGGACGCAGCCACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPLPAS*DAATEG
Trigger: GCCCTCCGTGGCTGCGTCCCAGGAGGCAGGCAGTGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGCTCACTGGCCAGCTaGCTGCCCTCCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERSLAS*LPSSRQ
Trigger: CTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTGAGCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGCCCTTCCCCAGGATaGCCTTGGCGTTGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGPSPG*PWRCVW
Trigger: CCACACGCAACGCCAAGGCCATCCTGGGGAAGGGCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGCGGGAGGTACCGGCTaGACTGTGGCCGCACATCGA +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSAGGTG*TVAAHR
Trigger: TCGATGTGCGGCCACAGTCCAGCCGGTACCTCCCGC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACAGCCACCGTGGCCCTaGACAGGAAGCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREQPPWP*TGSSAG
Trigger: CCCAGCGCTGCTTCCTGTCCAGGGCCACGGTGGCTG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCATTTGCTGCTGCTGCTaGGGCCTGAGCCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGICCCC*GLSPHR
Trigger: CCGGTGCGGGCTCAGGCCCCAGCAGCAGCAGCAAAT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTGCCTCCTGCCCGGTaGCTTGGCCGACGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLPPAR*LGRRQA
Trigger: AGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCTCCTGGGGAGCCTCTaGGAACGGCCCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGLLGSL*ERPFRG
Trigger: CCCCCTGAAGGGCCGTTCCCAGAGGCTCCCCAGGAG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGGATCCAACCTCCGTaGCTGCACCCTCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSRIQPP*LHPPRP
Trigger: GGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCTTTAGCCGGGGGTTaGGGGCCGCCTCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPLAGG*GPPQSP
Trigger: GGGGCTTTGAGGCGGCCCTCAACCCCCGGCTAAAGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCAGGTTCTTCATGGCTaGGACCTCGTCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGQVLHG*DLVRRR
Trigger: GCGCCGCCGGACGAGGTCTCAGCCATGAAGAACCTG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGTGACGCCTGGTCCATaGCATCCGCAAGTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGVTPGP*HPQVRG
Trigger: CCCACGCACTTGCGGATGTCATGGACCAGGCGTCAC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGATCCCATGAATCCCTaGGCTATGAGGCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPDPMNP*AMRQGD
Trigger: GTCCCCCTGCCTCATAGCTCAGGGATTCATGGGATC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGTCAGCCAGCTCGCTaGGCAGAGCGATCCCATGAA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGQPAR*AERSHE
Trigger: TTCATGGGATCGCTCTGCTCAGCGAGCTGGCTGACC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGTTGGGCCGCCCAGCTaGCAGGAAGACGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREVGPPS*QEDGTV
Trigger: GACTGTGCCGTCTTCCTGTCAGCTGGGCGGCCCAAC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGCTCCGACAGCAGATaGGGCGGCGGCGCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRSDSR*GGGAKS
Trigger: CGACTTTGCGCCGCCGCCGCATCTGCTGTCGGAGCG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGCAGCACCAGCTTGTaGCGCTCCTTGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGSTSL*RSLPPS
Trigger: GGACGGTGGCAAGGAGCGGCACAAGCTGGTGCTGCC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGAGACTCCATAGGGTaGAGCGTGGTCGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGDSIG*SVVGGH
Trigger: ATGGCCCCCGACCACGCTGCACCCTATGGAGTCTCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGAGGCCTCGGGGCCTaGGCTGCTGAGATAGTCGAG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGGLGA*AAEIVE
Trigger: CTCGACTATCTCAGCAGCGCAGGCCCCGAGGCCTCC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGGCGGTGCCCTGGCCTaGCTGGACACCCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKGGALA*LDTPWG
Trigger: CCCCCATGGGGTGTCCAGGCAGGCCAGGGCACCGCC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGCAGAAGAGCCGCCTaGTGCAGGCCACTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGRRAA*CRPLPK
Trigger: CTTTGGCAGTGGCCTGCAGCAGGCGGCTCTTCTGCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTGGTGTCGTGCTCCCTaGTGCGGGCACAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHWCRAP*CGHSPA
Trigger: GGCCGGACTGTGCCCGCAGCAGGGAGCACGACACCA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCGTGCGTGGTGTCGTaGTCCCTGCTGCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPCVVS*SLLRAQ
Trigger: CTGTGCCCGCAGCAGGGAGCACGACACCACGCACGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCAAGGCCACTGCAATaGCCACAGGGGGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPRPLQ*PQGAAA
Trigger: TGCGGCAGCCCCCTGTGGGCATTGCAGTGGCCTTGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCTCACTGTGTCCTTCTaGCGGGCCAAGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDLTVSF*RAKATA
Trigger: TGCAGTGGCCTTGGCCCGGCAGAAGGACACAGTGAG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGTTGGTGCCGTAGGCTaGCTCAGACCGGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDVGAVG*LRPAHC
Trigger: ACAGTGAGCCGGTCTGAGGCAGCCTACGGCACCAAC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCTTTTCCTCGGCGCTaGGCACCCGGGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSFPRR*APGSQA
Trigger: GGCCTGGCTCCCGGGTGCGCAGCGCCGAGGAAAAGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGACTCCCTGCTCGCTaGTCCAGGACTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGLPAR*SRTWEE
Trigger: CTCCTCCCAAGTCCTGGAGCAGCGAGCAGGGAGTCC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCTCTGCCGCTGGATTaGCAGGTCAGCCAGCTCGCT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPLPLD*QVSQLA
Trigger: AGCGAGCTGGCTGACCTGGCAATCCAGCGGCAGAGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCAGGTGTCCTTGCGCTaGAGGATCTGCATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGQVSLR*RICMRG
Trigger: CCCCCGCATGCAGATCCTGCAGCGCAAGGACACCTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCTCTCTCATGGTCGTaGTTGCGCTGCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSLSWS*LRCRRA
Trigger: GGCCCGCCTGCAGCGCAAGCACGACCATGAGAGAGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGGGTAGCCTCCTTCTaGTGGAAAGAGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGVASF*WKELRP
Trigger: AGGCCTCAGCTCTTTCCAGCAGAAGGAGGCTACCCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTGGGTGTCTCCCGGCTaGCGTGGCCCTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHWVSPG*RGPWAV
Trigger: CACAGCCCAAGGGCCACGGCAGCCGGGAGACACCCA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTCATAGCCACTGCCTaGCTCCTGGGACGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSVIATA*LLGRSH
Trigger: GTGGCTGCGTCCCAGGAGGCAGGCAGTGGCTATGAC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCACTGTCATAGCCACTaGCTGCCTCCTGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDHCHSH*LPPGTQ
Trigger: CTGCGTCCCAGGAGGCAGGCAGTGGCTATGACAGTG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGTGCAGCAGCAGCCCTaGTTCCCTGGGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGVQQQP*FPGWCL
Trigger: GAGGCACCACCCAGGGAAGCAGGGCTGCTGCTGCAC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGACACTGGCCCCGGTGTaGAGCAGCAGCCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGTLAPV*SSSPAS
Trigger: GGAAGCAGGGCTGCTGCTGCACACCGGGGCCAGTGT...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCTTGGCTTTCTTCTTaGCCAGCGCACCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPWLSS*PAHLGA
Trigger: GGCCCCCAGGTGCGCTGGGCAAGAAGAAAGCCAAGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCACTGGCCAGCTGGCTaGCCTCCTCACGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQHWPAG*PPHGRR
Trigger: TCGCCTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGTGTGGCCACGCTGTaGACGGGGAACAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGVATL*TGNRAS
Trigger: CGAGGCCCTGTTCCCCGTGCACAGCGTGGCCACACC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGCCCCTTCTTGTCCTTaGCCACAAGGGCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSAPSCP*PQGPGA
Trigger: TGCACCCGGCCCTTGTGGGCAAGGACAAGAAGGGGC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTGGATTTGCTGCTGCTaGTGGGGCCTGAGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGWICCC*WGLSPH
Trigger: GTGCGGGCTCAGGCCCCAGCAGCAGCAGCAAATCCA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGCCATCTGCTCATACTaGTCGCGCGCCACGACCTGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSAICSY*SRATTW
Trigger: CCAGGTCGTGGCGCGCGAGCAGTATGAGCAGATGGC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGCCATCTGCTCATACTaGTCGCGCGCCACGACCTGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGAICSY*SRATTW
Trigger: CCAGGTCGTGGCGCGCGAGCAGTATGAGCAGATGGC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCGGCTCCGGGCCATCTaGTCATACTGCTCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRLRAI*SYCSRA
Trigger: GGCGCGCGAGCAGTATGAGCAGATGGCCCGGAGCCG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTGGTGGGGTCGTAGGTaGCCGCCAGGTAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDWWGRR*PPGSRG
Trigger: ACCTCTACTACCTGGCGGGCACCTACGACCCCACCA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAAATCTCCCGTGAACTaGCGGTGCGGGAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPKSPVN*RCGKRR
Trigger: CCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCAAGAGATCAGAGGGTaGCGTCAAGGGTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPQEIRG*RQGSHL
Trigger: CAGGTGGGACCCTTGACGGCACCCTCTGATCTCTTG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTCGAGGGGTGCTGCTTaGACCTGGGGCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDSRGAA*TWGQDL
Trigger: CAAATCCTGGCCCCAGGTGCAAGCAGCACCCCTCGA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGRALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGTCCTCCTCTGCCGCTaGCCGCTCCTTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQVLLCR*PLLALS
Trigger: GCTGAGGGCAAGGAGCGGCCAGCGGCAGAGGAGGAC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCAGTGCCCGTCGGCTaGCACGGGCAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAVPVG*HGQHQL
Trigger: AAGCTGGTGCTGCCCGTGCCAGCCGACGGGCACTGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTGCCCCCTGCACAGCTaGCTAGCGCAGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKCPLHS*LAQPCP
Trigger: TGGGCAGGGCTGCGCTAGCCAGCTGTGCAGGGGGCA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCGTGGTCGGGGGCCATaGTTCCCTCCAGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRGRGP*FPPGAG
Trigger: ACCGGCACCTGGAGGGAACCATGGCCCCCGACCACG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCTGCCGCGCAGTGTTaGTGCCGTAGGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPAAQC*CRRLPQ
Trigger: CTGAGGCAGCCTACGGCACCAACACTGCGCGGCAGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCAGCAGCTCGCGGCTaGCAAGCCCCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAAARG*QAPGGH
Trigger: ATGACCGCCTGGGGCTTGCCAGCCGCGAGCTGCTGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGGCCACAGTGACGCCTaGTCCATGACATCCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPGHSDA*SMTSAS
Trigger: ACTTGCGGATGTCATGGACCAGGCGTCACTGTGGCC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGCCCAGGCCAGCCATaGGGCGCAGGTATCCGGGAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQSPGQP*GAGIRE
Trigger: CTCCCGGATACCTGCGCCCCATGGCTGGCCTGGGCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGCAGGAATGTCCTTGTaGGCTCAGGCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGAGMSL*AQAGPP
Trigger: CGGGGGCCCAGCCTGAGCCCACAAGGACATTCCTGC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGCCTGGTAGCGCCCTaGGTGGGTGGCTGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGLVAP*VGGCCR
Trigger: CCGACAACAGCCACCCACCCAGGGCGCTACCAGGCC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGCCTGGTAGCGCCCTaGGTGGGTGGCTGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGLVAP*VGGCCR
Trigger: CCGACAACAGCCACCCACCCAGGGCGCTACCAGGCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCAGGGGGACTGTGCTaGGGGGCCCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAAGGLC*GAQRPL
Trigger: CAGCGGCCTCTGGGCCCCCCAGCACAGTCCCCCTGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGTGTGGGCGGCTGCGCTaGGGCAGTGGAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQCGRLR*GSGAVQ
Trigger: CTGGACAGCTCCACTGCCCCAGCGCAGCCGCCCACA...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGGGGCACACAGGCTTaGTCTTGGGGGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGGTQA*SWGSRC
Trigger: ACACCTGGACCCCCAAGACCAAGCCTGTGTGCCCCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGTCCAGCCGGTCGATaGCGGCCTTCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGCPAGR*RPSGGT
Trigger: TGTGCCCCCTGAAGGCCGCCATCGACCGGCTGGACA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCTTGCCATCGCTCCTaGGGAGCGGCCCCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSCHRS*GAAPWD
Trigger: GTCCCACGGGGCCGCTCCCCAGGAGCGATGGCAAGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCACCTTGGGTTTCAGCTaGGCCACCCTGTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGTLGFS*ATLWAT
Trigger: CGTGGCCCACAGGGTGGCCCAGCTGAAACCCAAGGT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCTCACTCTCAGGGCTaGACAGGCGGCAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPHSQG*TGGRPL
Trigger: TAGGGGCCTGCCGCCTGTCCAGCCCTGAGAGTGAGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGGTCCTCCTTGTGGATaGCACACGAGCGCGCTAGGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSGPPCG*HTSALG
Trigger: CCCTAGCGCGCTCGTGTGCCATCCACAAGGAGGACC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGCGGGAGGTACCGGCTaGACTGTGGCCGCACATCGA +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREAGGTG*TVAAHR
Trigger: TCGATGTGCGGCCACAGTCCAGCCGGTACCTCCCGC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGAGGGCTCTGTGCACTaGATCTTGAAGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPEGSVH*ILKSGG
Trigger: GCCCCCTGACTTCAAGATCCAGTGCACAGAGCCCTC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCGGAGGAGCAGAGGCTaGAGGTGGACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGRRSRG*RWTRSL
Trigger: CAGGCTCCGTGTCCACCTCCAGCCTCTGCTCCTCCG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGAGGGCCGCTGCCCTTaGAGCGCAGGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAEGRCP*SAGPRA
Trigger: AGCCCGAGGCCCTGCGCTCCAAGGGCAGCGGCCCTC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCGATGTAGGGGAGGTTaGGCCGCCCAGCTGACAGGA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGRCRGG*AAQLTG
Trigger: TCCTGTCAGCTGGGCGGCCCAACCTCCCCTACATCG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCGGCTCAGCATAGGATaGGCACGCCATCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDRLSIG*ARHQPS
Trigger: TGACGGCTGATGGCGTGCCCATCCTATGCTGAGCCG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGGAGGCATCTGCGGTaGGCGGCTCAGCATAGGATG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGRHLR*AAQHRM
Trigger: CATCCTATGCTGAGCCGCCCACCGCAGATGCCTCCC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGCACACAGGGTCCCTaGCGCACGTGGGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERTQGP*RTWEAS
Trigger: AGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCCCAGGTGCCCCCGTTaGAACCCAGCTGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGPRCPR*NPAGLR
Trigger: TCTCAGCCCAGCTGGGTTCCAACGGGGGCACCTGGG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCATTCCCTGGGGATACTaGGGCAGAGCCCTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGIPWGY*GRALEG
Trigger: CCCCTCGAGGGCTCTGCCCCAGTATCCCCAGGGAAT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCGAGGCCTGTGGTGTaGGGGACACAGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSRPVV*GTQSSS
Trigger: GGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCTCCTGGGGAGCCTCTaGGAACGGCCCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKLLGSL*ERPFRG
Trigger: CCCCCTGAAGGGCCGTTCCCAGAGGCTCCCCAGGAG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCTCCTCGGCCCTCTCTaGAACTCCAGTGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDLLGPL*NSSGSA
Trigger: TGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCGGGGCCTGCGCTGCTaGGATAGTCGAGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGRGLRC*DSRGPL
Trigger: TAAAGGGCCTCGACTATCTCAGCAGCGCAGGCCCCG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCCGGGCACAGTCCTGTaGAGAGGTGGGCAACTCGAA +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSPGTVL*RGGQLE
Trigger: TTCGAGTTGCCCACCTCTTCACAGGACTGTGCCCGG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGTGCTGCTGGTGCCTaGTGCGGGCCACCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESAAGA*CGPPSV
Trigger: CACAGAAGGTGGCCCGCATCAGGCACCAGCAGCACT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCGGCCGTGGACTGCTaGCCCTCCCCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSAVDC*PSPFFS
Trigger: GGAAAAGAATGGGGAGGGTCAGCAGTCCACGGCCGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGCAGGCAGCGAGCTTaGGTGTTTGCGCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGRQRA*VFALPR
Trigger: CCGAGGAAGCGCAAACACTCAAGCTCGCTGCCTGCC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGGTTGGCCTCCATCTTaGCCACAGAGGAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGGWPPS*PQRRVR
Trigger: CCTCACCCTCCTCTGTGGTCAAGATGGAGGCCAACC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGGGCCTCTTTGCGCTTaGGCTTGGATTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDGPLCA*AWICCC
Trigger: GCAGCAGCAAATCCAAGCTCAAGCGCAAAGAGGCCC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCGGCTGCTGGCTGTGTaGGAAGCCATGGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRLLAV*EAMGNG
Trigger: GCCGTTGCCCATGGCTTCGCACACAGCCAGCAGCCG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGCTGGGGCGGCAGGTTaGGCAGGTAGAAGTTATCTT +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPAGAAG*AGRSYL
Trigger: AAGATAACTTCTACCTGCGCAACCTGCCGCCCCAGC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCCTTGGGGCCCTTCTaGAGGGAGCCTGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSLGPF*REPASP
Trigger: GGGTGAGGCAGGCTCCCTGCAGAAGGGCCCCAAGGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCTTGGGGCCCTTCTaGAGGGAGCCTGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSLGPF*REPASP
Trigger: GGGTGAGGCAGGCTCCCTGCAGAAGGGCCCCAAGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCGCTGGCCGCTCCTTaGCCTCAGCGGCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPLAAP*PQRPCP
Trigger: CGGGCAAGGCCGCTGAGGGCAAGGAGCGGCCAGCGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCTTGTGCCGCTCCTTaGCACCGTCCTCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQACAAP*HRPPLP
Trigger: CGGCAGAGGAGGACGGTGGCAAGGAGCGGCACAAGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGTCCTTGCCCTCCCCTaGCACGGCACAGGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKVLALP*HGTGLG
Trigger: GCCGAGGCCTGTGCCGTGGCAGGGGAGGGCAAGGAC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGAGGCCTCGGGGCCTaGGCTGCTGAGATAGTCGAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGGLGA*AAEIVE
Trigger: CTCGACTATCTCAGCAGCGCAGGCCCCGAGGCCTCC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGCGGCCATCAAGTGCTaGTGGTGCCTGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHAAIKC*WCLMRA
Trigger: GGCCCGCATCAGGCACCAGCAGCACTTGATGGCCGC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTTGGTGCCGTAGGCTaGCTCAGACCGGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSVGAVG*LRPAHC
Trigger: ACAGTGAGCCGGTCTGAGGCAGCCTACGGCACCAAC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCCGCGCAGTGTTGGTaGCGTAGGCTGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAAQCW*RRLPQT
Trigger: GGTCTGAGGCAGCCTACGGCACCAACACTGCGCGGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCCTCCAGATCCAGGTaGTGGTCTTCGGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSSRSR*WSSGFR
Trigger: GCGGAAGCCCGAAGACCAGCACCTGGATCTGGAGGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCCGGGGCGGTGGTTTaGATAGTTTCAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPGAVV*IVSGSS
Trigger: CGAGGACCCTGAAACTATGCAAACCACCGCCCCGGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGCTCCCCCTCCTCCCTaGTCCTCTCTTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHAPPPP*SSLLVP
Trigger: GGGCACGAGAAGAGAGGAGCAGGGAGGAGGGGGAGC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCTCCCCCTCCTCCCTaGTCCTCTCTTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAPPPP*SSLLVP
Trigger: GGGCACGAGAAGAGAGGAGCAGGGAGGAGGGGGAGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCTGACGAGGGCCCCTaGTCCCCCTCCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPDEGP*SPSSLL
Trigger: GAGCAGGGAGGAGGGGGAGCAGGGGCCCTCGTCAGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGGCACCCGGACTCCCTaGTCGCTGCTCCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKGTRTP*SLLQDL
Trigger: CAAGTCCTGGAGCAGCGAGCAGGGAGTCCGGGTGCC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCCTCTGAGTCCTCCATaGTCTGCTGCCCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGPLSPP*SAAPAR
Trigger: ACGAGCTGGGGCAGCAGAGCATGGAGGACTCAGAGG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGCGTGGCCAGGTGCTaGAGGTTGAAGGCTAGCACG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSVARC*RLKAST
Trigger: CGTGCTAGCCTTCAACCTGCAGCACCTGGCCACGCT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTCTCATGGTCGTGCTTaGGCTGCAGGCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGSHGRA*AAGGPA
Trigger: AGCTGGCCCGCCTGCAGCGCAAGCACGACCATGAGA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATCTCTCTCATGGTCGTaGTTGCGCTGCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESLSWS*LRCRRA
Trigger: GGCCCGCCTGCAGCGCAAGCACGACCATGAGAGAGA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCACTGTCATAGCCACTaGCTGCCTCCTGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGHCHSH*LPPGTQ
Trigger: CTGCGTCCCAGGAGGCAGGCAGTGGCTATGACAGTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGTGCAGCAGCAGCCCTaGTTCCCTGGGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKVQQQP*FPGWCL
Trigger: GAGGCACCACCCAGGGAAGCAGGGCTGCTGCTGCAC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACCTTGGCTTTCTTCTTaGCCAGCGCACCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREPWLSS*PAHLGA
Trigger: GGCCCCCAGGTGCGCTGGGCAAGAAGAAAGCCAAGG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCTTGTGCTTCACCTTaGTCAGCTTCCGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPCASP*SASGPS
Trigger: GGAAGGGCCGGAAGCTGAGCAAGGTGAAGCACAAGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTGCTTGCCGGCCTTGTaGTTCACCTTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPCLPAL*FTLLSF
Trigger: GAAGCTGAGCAAGGTGAAGCACAAGGCCGGCAAGCA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGGCCCTTGCCCTGCTTaGCGGCCTTGTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGGPCPA*RPCASP
Trigger: AGGTGAAGCACAAGGCCGGCAAGCAGGGCAAGGGCC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGGCGGCGCTCTGCTCTaGGCTCAGAGGGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAGGALL*AQRAAV
Trigger: GACAGCGGCCCTCTGAGCGCAGAGCAGAGCGCCGCC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTGGCCCGCGTACTTaGGCAGCGCCAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPGPRT*AAPAPW
Trigger: CCATGGGGCTGGCGCTGCGCAAGTACGCGGGCCAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCTGAGCCCGCACCGGTaGCAGCCACCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTLSPHR*QPPWPW
Trigger: CCAGGGCCACGGTGGCTGGCACCGGTGCGGGCTCAG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCACGTGGGAGGCATCTaGGGTGGGCGGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGHVGGI*GGRLSI
Trigger: TATGCTGAGCCGCCCACCGCAGATGCCTCCCACGTG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGCATATTTGCTCAGATaGGCCCTTGGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGAYLLR*ALGRPG
Trigger: CCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGAGCCCTCGAGGGGTaGTGCTTGCACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRALEG*CLHLGP
Trigger: TGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGCTCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACGGCCCGGGCCACGCTaGGGAAGTTGTGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKRPGPR*GSCGWP
Trigger: CGGCCAACCACAACTTCCCCAGCGTGGCCCGGGCCG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGAGCGGTCGAAGTCCTTaGGGCCCTTCTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGSGRSP*GPSAGS
Trigger: GCTCCCTGCAGAAGGGCCCCAAGGACTTCGACCGCT...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCGGCCTCTCCGACTaGCCTGGGCCCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSGLSD*PGPLED
Trigger: GTCCTCTAAGGGCCCAGGCCAGTCGGAGAGGCCGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGGGCAGCTGCTCGGTaGGTGGATCCGGGCGAACTC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRAAAR*VDPGEL
Trigger: GAGTTCGCCCGGATCCACCCACCGAGCAGCTGCCCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCTCTGCATCATGAGGTaGGGGGCCAGGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQLCIMR*GARSPG
Trigger: CCCTGGGGACCTGGCCCCCCACCTCATGATGCAGAG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAAGGTGGCAGCTTGGTaGGGCCTGCAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKKVAAW*GLQRVR
Trigger: CCTCACCCGCTGCAGGCCCCACCAAGCTGCCACCTT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGCAGGAATGTCCTTGTaGGCTCAGGCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHAGMSL*AQAGPP
Trigger: CGGGGGCCCAGCCTGAGCCCACAAGGACATTCCTGC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTGTCCAGCCGGTCGATaGCGGCCTTCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHCPAGR*RPSGGT
Trigger: TGTGCCCCCTGAAGGCCGCCATCGACCGGCTGGACA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGCAGCCACGGAGGGCTaGGCTGGGCACCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKAATEG*AGHLGV
Trigger: GACACCCAGGTGCCCAGCCCAGCCCTCCGTGGCTGC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCACTGCCTGCCTCCTaGGACGCAGCCACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPLPAS*DAATEG
Trigger: GCCCTCCGTGGCTGCGTCCCAGGAGGCAGGCAGTGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGGTGGTGCCCACCTTaGCCTTCACCGACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGWCPP*PSPTAS
Trigger: AGAGGCGGTCGGTGAAGGCCAAGGTGGGCACCACCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCAGAGGGCGTCCCTGCTaGGGGTGGCCCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTRGRPC*GWPPAL
Trigger: CAGAGCCGGGGGCCACCCCCAGCAGGGACGCCCTCT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGCTTCCGCCGCAGCACTaGCTGCAGCACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGLPPQH*LQHCAL
Trigger: AAGGGCACAGTGCTGCAGCCAGTGCTGCGGCGGAAG...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGTCCTCCTTGTGGATaGCACACGAGCGCGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGPPCG*HTSALG
Trigger: CCCTAGCGCGCTCGTGTGCCATCCACAAGGAGGACC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGCAGGTCCTCCTTGTaGATGGCACACGAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERRSSL*MAHERA
Trigger: AGCGCGCTCGTGTGCCATCCACAAGGAGGACCTGCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCACCGCCTTCCGCTTaGTCTGCGCCACCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPPPSA*SAPPRT
Trigger: GGTCCGCGGTGGCGCAGACCAAGCGGAAGGCGGTGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCTGCTGCCGTTGAGCTaGAAGAGGTTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDLLPLS*KRFCST
Trigger: GGTGCTGCAGAACCTCTTCCAGCTCAACGGCAGCAG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGCGGGAACTCTGCCTaGCCCGCGTACTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSGNSA*PAYLRS
Trigger: GCTGCGCAAGTACGCGGGCCAGGCAGAGTTCCCGCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGAGGAGCAGAGGCTaGAGGTGGACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRRSRG*RWTRSL
Trigger: CAGGCTCCGTGTCCACCTCCAGCCTCTGCTCCTCCG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCGTTCTCATCCTCGTaGCAGGACTGGTACAGCGCA +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSFSSS*QDWYSA
Trigger: TGCGCTGTACCAGTCCTGCCACGAGGATGAGAACGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATCGCGCGCCACGACCTaGCACTTGTGGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESRATT*HLWEMV
Trigger: GACCATCTCCCACAAGTGCCAGGTCGTGGCGCGCGA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCAGGCGCCCGGTGGTaGGGTCGTAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPGARW*GRRCPP
Trigger: TGGCGGGCACCTACGACCCCACCACCGGGCGCCTGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCGGCTCAGCATAGGATaGGCACGCCATCAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGRLSIG*ARHQPS
Trigger: TGACGGCTGATGGCGTGCCCATCCTATGCTGAGCCG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGGATGGGACGGGACTaGATTCCGACACCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSRMGRD*IPTPGA
Trigger: CGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCTGGGGCCAGGATTTaGGCTCAGGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPGARI*AQVVRG
Trigger: CCCCCTGACCACCTGAGCCCAAATCCTGGCCCCAGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTCTCTGGAACTCCAGTaGCTCAGCATGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGSLELQ*LSMPPC
Trigger: GCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTTTAGCCGGGGGTTaGGGGCCGCCTCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPLAGG*GPPQSP
Trigger: GGGGCTTTGAGGCGGCCCTCAACCCCCGGCTAAAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCTTGCGCTCCTCGCTaGTGGCCATGGCGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPCAPR*WPWRCP
Trigger: AGGGCACCGCCATGGCCATCAGCGAGGAGCGCAAGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGTGACGCCTGGTCCATaGCATCCGCAAGTGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHVTPGP*HPQVRG
Trigger: CCCACGCACTTGCGGATGTCATGGACCAGGCGTCAC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGCCTCCCTGGCCCCTaGGAGCAGCCCGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGLPGP*EQPGLL
Trigger: GAGGAGCCCGGGCTGCTCTCAGGGGCCAGGGAGGCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTTGGGAGGAGGCCCCTaGCGAGGGCCCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHLGGGP*RGPLLP
Trigger: GGGGAGCAGGGGCCCTCGTCAGGGGCCTCCTCCCAA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGCAGGTCCCCCAGGTTaGTGGTGGCGGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKAGPPG*WWRPPR
Trigger: CCTTGGTGGCCGCCACCATCAACCTGGGGGACCTGC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGAGGCCGCTGGGGGCTaGGGGTCCGGTGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFEAAGG*GSGGLS
Trigger: CGACAGCCCACCGGACCCTCAGCCCCCAGCGGCCTC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCAGCAGCTGCTCCAGTaGGTAGATCCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGQQLLQ*VDPLPV
Trigger: AACCGGCAGAGGATCTACTCACTGGAGCAGCTGCTG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGTCCAGCCAGCAGGTaGGAAACAGGCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGPASR*ETGPNG
Trigger: CCCATTGGGGCCTGTTTCTCACCTGCTGGCTGGACC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCTTCTGCAGGGAGCCTaGCTCACCCCGGTCTCGATC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKLLQGA*LTPVSI
Trigger: GATCGAGACCGGGGTGAGGCAGGCTCCCTGCAGAAG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGCCCGCCTTCTCTCTaGCCAGCTCTTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGCPPSL*PALCPR
Trigger: TCGTGGGCAAAGAGCTGGGCAGAGAGAAGGCGGGCA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGATGGTTCCCTCCAGGTaGCGGTCCTTGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKMVPSR*RSLPSP
Trigger: AGGGGAGGGCAAGGACCGGCACCTGGAGGGAACCAT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACATGGTTCCCTCCAGGTaGCGGTCCTTGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHMVPSR*RSLPSP
Trigger: AGGGGAGGGCAAGGACCGGCACCTGGAGGGAACCAT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCATCAAGTGCTGCTGGTaGCTGATGCGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSIKCCW*LMRATF
Trigger: GAAGGTGGCCCGCATCAGGCACCAGCAGCACTTGAT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGAGAAGAGCCGCCTGCTaGAGGCCACTGCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRRAAC*RPLPKG
Trigger: CCCCTTTGGCAGTGGCCTGCAGCAGGCGGCTCTTCT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTGGTGTCGTGCTCCCTaGTGCGGGCACAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAWCRAP*CGHSPA
Trigger: GGCCGGACTGTGCCCGCAGCAGGGAGCACGACACCA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTCCTCCAGATCCAGGTaGTGGTCTTCGGGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGSSRSR*WSSGFR
Trigger: GCGGAAGCCCGAAGACCAGCACCTGGATCTGGAGGA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGGCAGACATTTAAAGTaGACGGGGCGCTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREGRHLK*TGRWAE
Trigger: CTCGGCCCAGCGCCCCGTGCACTTTAAATGTCTGCC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCTCCTCTCTTCTCGTaGCCCTCCCTGAGTAGAATG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAPLFS*PSLSRM
Trigger: CATTCTACTCAGGGAGGGGCACGAGAAGAGAGGAGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCAGGTGTCCTTGCGCTaGAGGATCTGCATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQQVSLR*RICMRG
Trigger: CCCCCGCATGCAGATCCTGCAGCGCAAGGACACCTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCTCTCTCATGGTCGTaGTTGCGCTGCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSLSWS*LRCRRA
Trigger: GGCCCGCCTGCAGCGCAAGCACGACCATGAGAGAGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCGAGCTTGAGTGTTTaGGCTTCCTCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQASLSV*ASSAGQ
Trigger: CTGGCCGGCCGAGGAAGCGCAAACACTCAAGCTCGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCAGGCTCGCCCCCACTaGCTCCTCGCAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTQARPH*LLAAPH
Trigger: GTGCGGAGCTGCGAGGAGGCAGTGGGGGCGAGCCTG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCGCTCCTCTCCAGCTTaGTTCGCTTCTTCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSRSSPA*FASSQA
Trigger: AGCCTGCGAAGAAGCGAAGCAAGCTGGAGAGGAGCG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGTCATAGCCACTGCCTaGCTCCTGGGACGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHVIATA*LLGRSH
Trigger: GTGGCTGCGTCCCAGGAGGCAGGCAGTGGCTATGAC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCGAGAACCGCTTCCTaGAGCAGCTGCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSRTAS*SSCSSE
Trigger: CTCACTGGAGCAGCTGCTGCAGGAAGCGGTTCTCGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCCCTTGCTGGCCGCTaGCACCGCCTTCCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPLAGR*HRLPLG
Trigger: ACCAAGCGGAAGGCGGTGGCAGCGGCCAGCAAGGGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCTTGGATTTGCTGCTaGTGCTGGGGCCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAWICC*CWGLSP
Trigger: CGGGCTCAGGCCCCAGCAGCAGCAGCAAATCCAAGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGCTTGGATTTGCTGCTaGTGCTGGGGCCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHAWICC*CWGLSP
Trigger: CGGGCTCAGGCCCCAGCAGCAGCAGCAAATCCAAGC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTTCTTGCCGTCGCACTaGCTCTTGCCCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGFLPSH*LLPSLV
Trigger: GACCAAGCTGGGCAAGAGGCAGTGCGACGGCAAGAA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCCATCTGCTCATACTaGTCGCGCGCCACGACCTGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAICSY*SRATTW
Trigger: CCAGGTCGTGGCGCGCGAGCAGTATGAGCAGATGGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCGGCTCCGGGCCATCTaGTCATACTGCTCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARLRAI*SYCSRA
Trigger: GGCGCGCGAGCAGTATGAGCAGATGGCCCGGAGCCG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGGTGGGGTCGTAGGTaGCCGCCAGGTAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGWWGRR*PPGSRG
Trigger: ACCTCTACTACCTGGCGGGCACCTACGACCCCACCA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCACGTGGGAGGCATCTaGGGTGGGCGGCTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKHVGGI*GGRLSI
Trigger: TATGCTGAGCCGCCCACCGCAGATGCCTCCCACGTG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCCGTGAACTGCCGGTaGGGGAAACGGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPVNCR*GKRRAL
Trigger: CAGCGCCCTCCGTTTCCCGCACCGGCAGTTCACGGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAAATCTCCCGTGAACTaGCGGTGCGGGAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSKSPVN*RCGKRR
Trigger: CCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGTGGCCTCTGCCCCCTaGCCCGAGATGCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAVASAP*PEMPLS
Trigger: CGACAGAGGCATCTCGGGGCAGGGGGCAGAGGCCAC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTGCTTCCCGAGTGTaGCAGGGCGGCGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPASRV*QGGEGE
Trigger: CTCACCCTCGCCGCCCTGGCACACTCGGGAAGCAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGATAGGCCCCGAGCCCTaGCCAGTTCAGGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQIGPEP*PVQEPG
Trigger: GCCAGGTTCCTGAACTGGGCAGGGCTCGGGGCCTAT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTCCAGTGGCTCAGCATaGCCCCGTGCATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPSSGSA*PRAFFF
Trigger: GAAGAAAAATGCACGGGGGCATGCTGAGCCACTGGA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACTGTGTGCGAAGCCATaGGCAACGGCGACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRELCAKP*ATATGS
Trigger: ACTTCCCGTCGCCGTTGCCCATGGCTTCGCACACAG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGATCTGGGAGGTGGTaGGGTGGGAGCCACGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRSGRW*GGSHGR
Trigger: CCTACCGTGGCTCCCACCCCACCACCTCCCAGATCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTGGCCGGCAGCAGCGTaGGCTGGGGCGGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHWPAAA*AGAAGC
Trigger: GCAACCTGCCGCCCCAGCCCACGCTGCTGCCGGCCA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTGGGGAAGTTGTGGTTaGCCGGCAGCAGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKWGSCG*PAAAWA
Trigger: AGCCCACGCTGCTGCCGGCCAACCACAACTTCCCCA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGACGCTGGGGAAGTTGTaGTTGGCCGGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQTLGKL*LAGSSV
Trigger: CACGCTGCTGCCGGCCAACCACAACTTCCCCAGCGT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACACGCTGGGGAAGTTGTaGTTGGCCGGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHTLGKL*LAGSSV
Trigger: CACGCTGCTGCCGGCCAACCACAACTTCCCCAGCGT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACGTGGTCGGGGGCCATaGTTCCCTCCAGGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKRGRGP*FPPGAG
Trigger: ACCGGCACCTGGAGGGAACCATGGCCCCCGACCACG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGACCAAGGGTGCTTTCTaGCCCACCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKTKGAF*PTTRAW
Trigger: CCAGGCCCTGGTGGTGGGCCAGAAAGCACCCTTGGT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCAGCTGCTCGGTGGGTaGATCCGGGCGAACTCTACG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQQLLGG*IRANST
Trigger: CGTAGAGTTCGCCCGGATCCACCCACCGAGCAGCTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGGGTCCCCGCCCAGCTaGCCGCTCTGCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKGSPPS*PLCIMR
Trigger: CCTCATGATGCAGAGCGGCCAGCTGGGCGGGGACCC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGGCTTCCGCTGGAACTaGGCGGCCCTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAGFRWN*AALCCC
Trigger: GCAGCAGCAGAGGGCCGCCCAGTTCCAGCGGAAGCC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCTTGTGGGTGGACTTTaGGGCCTTCTCCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQLVGGL*GLLLGG
Trigger: CCCGCCCAGGAGAAGGCCCCAAAGTCCACCCACAAG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGCAGGGGGACTGTGCTaGGGGGCCCAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHAGGLC*GAQRPL
Trigger: CAGCGGCCTCTGGGCCCCCCAGCACAGTCCCCCTGC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTGCAGGGGTTGGCTGTaGGCGGCTGCGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTCRGWL*AAALGQ
Trigger: CTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGGGGCACACAGGCTTaGTCTTGGGGGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGGTQA*SWGSRC
Trigger: ACACCTGGACCCCCAAGACCAAGCCTGTGTGCCCCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTCTCGTCTCTCTCATaGTCGTGCTTGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGLSSLS*SCLRCR
Trigger: CCTGCAGCGCAAGCACGACCATGAGAGAGACGAGAG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCACACCTTGGCACTCTTaGCTCGGGACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSTPWHS*LGTASP
Trigger: GGGAGAAGCTGTCCCGAGCCAAGAGTGCCAAGGTGT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGGCCCCAGACACCTTaGCACTCTTGGCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGWPQTP*HSWLGT
Trigger: TGTCCCGAGCCAAGAGTGCCAAGGTGTCTGGGGCCA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCTGGGCTGGGCACCTaGGTGTCTCCCGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAGLGT*VSPGCR
Trigger: ACGGCAGCCGGGAGACACCCAGGTGCCCAGCCCAGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCACTGCCTGCCTCCTaGGACGCAGCCACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPLPAS*DAATEG
Trigger: GCCCTCCGTGGCTGCGTCCCAGGAGGCAGGCAGTGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCGCTCACTGGCCAGCTaGCTGCCCTCCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARSLAS*LPSSRQ
Trigger: CTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTGAGCG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGTCCTCCTTGTGGATaGCACACGAGCGCGCTAGGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGPPCG*HTSALG
Trigger: CCCTAGCGCGCTCGTGTGCCATCCACAAGGAGGACC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCGCAGGTCCTCCTTGTaGATGGCACACGAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRRSSL*MAHERA
Trigger: AGCGCGCTCGTGTGCCATCCACAAGGAGGACCTGCG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGTACCGGCTGGACTGTaGCCGCACATCGAGAACCGC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKVPAGL*PHIENR
Trigger: GCGGTTCTCGATGTGCGGCCACAGTCCAGCCGGTAC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGCAGAGGCTGGAGGTaGACACGGAGCCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSRGWR*TRSLRR
Trigger: CCTCCTCAGGCTCCGTGTCCACCTCCAGCCTCTGCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACAGCCACCGTGGCCCTaGACAGGAAGCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKQPPWP*TGSSAG
Trigger: CCCAGCGCTGCTTCCTGTCCAGGGCCACGGTGGCTG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTCCGGGAGAGCTCTTTaGCTTTGGAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDSGRAL*LWRSSG
Trigger: CCCTGAGCTTCTCCAAAGCCAAAGAGCTCTCCCGGA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTGCCACGCCGCTGTGTaGGATTCCCCGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKCHAAV*DSPTTS
Trigger: GGAAGTGGTCGGGGAATCCCACACAGCGGCGTGGCA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCGCCTCTTGCCCAGCTTaGTCTCCTCAGGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGASCPA*SPQGGR
Trigger: TCTACCACCCTGAGGAGACCAAGCTGGGCAAGAGGC...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTCGTTCTCATCCTCGTaGCAGGACTGGTACAGCGCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDSFSSS*QDWYSA
Trigger: TGCGCTGTACCAGTCCTGCCACGAGGATGAGAACGA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGTCCCTGGCGCACGTaGGAGGCATCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGPWRT*EASAVG
Trigger: GCCCACCGCAGATGCCTCCCACGTGCGCCAGGGACC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCTGGATTCCGACACCTaGAGCGCTCTTTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDLDSDT*SALSRE
Trigger: TTCCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTTGGCCTCAGACCAACTaGCCCCGGAAACAGAAATCA +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPWPQTN*PRKQKS
Trigger: TGATTTCTGTTTCCGGGGCCAGTTGGTCTGAGGCCA...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCCAGTTCAGGAACCTaGCCAAACTGCCCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPSSGT*PNCPFS
Trigger: TGAGAAGGGGCAGTTTGGCCAGGTTCCTGAACTGGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGAGGAGAGAATCTGGTaGGACTGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDEERIW*DCEPAL
Trigger: GAGGGCAGGTTCACAGTCCCACCAGATTCTCTCCTC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGATTCCCTGGGGATACTaGGGCAGAGCCCTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKIPWGY*GRALEG
Trigger: CCCCTCGAGGGCTCTGCCCCAGTATCCCCAGGGAAT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGTCTGTCCTTGGCTGTaGGAGAAGGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGVCPWL*EKGRGV
Trigger: CACACCCCTCCCCTTCTCCCACAGCCAAGGACAGAC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCGAGGCCTGTGGTGTaGGGGACACAGAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSRPVV*GTQSSS
Trigger: GGACGAGCTCTGTGTCCCCCACACCACAGGCCTCGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGTGCGGGTCCATGGTTaGAGGCTGTTTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDVRVHG*RLFPGY
Trigger: GTATCCAGGAAACAGCCTCCAACCATGGACCCGCAC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTGTGAGCACGTGCCACTaGTTCGGATGTGATGATGTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPVSTCH*FGCDDV
Trigger: GACATCATCACATCCGAACCAGTGGCACGTGCTCAC...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584436.7
CDS-3UTR TCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATCCTGGCTGCTGTATTTaGGCAGGTTCTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDPGCCI*AGSSWL
Trigger: CAGCCATGAAGAACCTGCTCAAATACAGCAGCCAGG...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGTGGGGTGTGGGCTCTaGGGGCAGGATGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKVGCGL*GQDDQL
Trigger: CAGCTGGTCATCCTGCCCTCAGAGCCCACACCCCAC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGGCCTCCCTGGCCCCTaGGAGCAGCCCGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPGLPGP*EQPGLL
Trigger: GAGGAGCCCGGGCTGCTCTCAGGGGCCAGGGAGGCC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGGTCAGCCAGCTCGCTaGGCAGAGCGATCCCATGAA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKGQPAR*AERSHE
Trigger: TTCATGGGATCGCTCTGCTCAGCGAGCTGGCTGACC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGGCGCCAGCCCGCCCTaGCAGCTGCTCTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAGASPP*QLLFLH
Trigger: GTGTAAGAAGAGCAGCTGTCAGGGCGGGCTGGCGCC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGTTGGCCTCCATCTTaGCCACAGAGGAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGWPPS*PQRRVR
Trigger: CCTCACCCTCCTCTGTGGTCAAGATGGAGGCCAACC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGTTGGGCCGCCCAGCTaGCAGGAAGACGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKVGPPS*QEDGTV
Trigger: GACTGTGCCGTCTTCCTGTCAGCTGGGCGGCCCAAC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGTTGGGCCGCCCAGCTaGCAGGAAGACGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAVGPPS*QEDGTV
Trigger: GACTGTGCCGTCTTCCTGTCAGCTGGGCGGCCCAAC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCCACTTGACATCGTTCTaGTCCCCGAGCCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSHLTSF*SPSLKQ
Trigger: CTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTG...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGGCAGCACCAGCTTGTaGCGCTCCTTGCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAGSTSL*RSLPPS
Trigger: GGACGGTGGCAAGGAGCGGCACAAGCTGGTGCTGCC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCCGCCGCTCGCCCTTaGCCTCGGCCTTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAAARP*PRPSGG
Trigger: CCCACCTGAAGGCCGAGGGCAAGGGCGAGCGGCGGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGACTGTAGCCCAGGGATaGCAGCTCCAGGGACTTGCG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKTVAQG*QLQGLA
Trigger: CGCAAGTCCCTGGAGCTGGCATCCCTGGGCTACAGT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGACTGTAGCCCAGGGATaGCAGCTCCAGGGACTTGCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQTVAQG*QLQGLA
Trigger: CGCAAGTCCCTGGAGCTGGCATCCCTGGGCTACAGT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAGAGGACAGGAACTTTaGTTCCTGCTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPRGQEL*FLLDAA
Trigger: AGCTGCATCCAGCAGGAAGCAAAGTTCCTGTCCTCT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTATGCCCACAGGGGGCTaGCGCACCTCCCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFMPTGG*RTSPSP
Trigger: CGGCGACGGGGAGGTGCGGCAGCCCCCTGTGGGCAT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACCAAGGCCACTGCAATaGCCACAGGGGGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKPRPLQ*PQGAAA
Trigger: TGCGGCAGCCCCCTGTGGGCATTGCAGTGGCCTTGG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTCACTGTGTCCTTCTaGCGGGCCAAGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLTVSF*RAKATA
Trigger: TGCAGTGGCCTTGGCCCGGCAGAAGGACACAGTGAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCCGCGCAGTGTTGGTaGCGTAGGCTGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAAAQCW*RRLPQT
Trigger: GGTCTGAGGCAGCCTACGGCACCAACACTGCGCGGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCCGGGGCGGTGGTTTaGATAGTTTCAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPGAVV*IVSGSS
Trigger: CGAGGACCCTGAAACTATGCAAACCACCGCCCCGGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGAGTCCTCCATGCTCTaGTGCCCCAGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHESSML*CPSSSS
Trigger: GGAAGACGAGCTGGGGCAGCAGAGCATGGAGGACTC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGGGTCCAGGTGTCCTTaGGCTGCAGGATCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKGSRCP*AAGSAC
Trigger: GCATGCAGATCCTGCAGCGCAAGGACACCTGGACCC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCGCATCCCCACCTCCTaGGTGTCCAGCCGGTCGATG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARIPTS*VSSRSM
Trigger: CATCGACCGGCTGGACACGCAGGAGGTGGGGATGCG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCAGGCTCGCCCCCACTaGCTCCTCGCAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHQARPH*LLAAPH
Trigger: GTGCGGAGCTGCGAGGAGGCAGTGGGGGCGAGCCTG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCACTGGCCAGCTGGCTaGCCTCCTCACGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTHWPAG*PPHGRR
Trigger: TCGCCTGCCGTGAGGAGGGCAGCCAGCTGGCCAGTG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGGCGGCGCTCTGCTCTaGGCTCAGAGGGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHGGALL*AQRAAV
Trigger: GACAGCGGCCCTCTGAGCGCAGAGCAGAGCGCCGCC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATTCGGGGCCGTCCTGTaGTTTGGGGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKFGAVL*FGGQAG
Trigger: CCCAGCCTGTCCCCCAAAGCACAGGACGGCCCCGAA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCGGCGCGGAAGCCGTTaGCAAATATGGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRRGSR*QIWVWP
Trigger: TGGCCACACCCATATTTGGCAACGGCTTCCGCGCCG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCTGAGCCCGCACCGGTaGCAGCCACCGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFLSPHR*QPPWPW
Trigger: CCAGGGCCACGGTGGCTGGCACCGGTGCGGGCTCAG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCGTCGCACTGCCTCTTaGCCAGCTTGGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRRTAS*PAWSPQ
Trigger: CTGAGGAGACCAAGCTGGGCAAGAGGCAGTGCGACG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATTCTTGCCGTCGCACTaGCTCTTGCCCAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREFLPSH*LLPSLV
Trigger: GACCAAGCTGGGCAAGAGGCAGTGCGACGGCAAGAA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGCATATTTGCTCAGATaGGCCCTTGGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKAYLLR*ALGRPG
Trigger: CCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCCCCTGCCCCGAGATaGCTCTGTCGTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPPAPR*LCRPRC
Trigger: GCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACTCAGAGCTGGGCCCTaGTTCCCGAGTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKLRAGP*FPSVPG
Trigger: CCCTGGCACACTCGGGAAGCAGGGCCCAGCTCTGAG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATCCAACCTCCGTGGCTaGACCCTCCTCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKSNLRG*TLLGPL
Trigger: GAGAGGGCCGAGGAGGGTGCAGCCACGGAGGTTGGA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGGAGCTTCGTGGGAGTaGGAGAACCAGATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGGASWE*ENQIWE
Trigger: CTCCCAGATCTGGTTCTCCCACTCCCACGAAGCTCC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGTCCTCCTCTGCCGCTaGCCGCTCCTTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTVLLCR*PLLALS
Trigger: GCTGAGGGCAAGGAGCGGCCAGCGGCAGAGGAGGAC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCTGAGGGGCGGGGGTaGCCCGGCGTAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAEGRG*PGVGCG
Trigger: ACCGCATCCTACGCCGGGCCACCCCCGCCCCTCAGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCAGAAGGCACGAAGGTaGGCCCGCTGGCCTTTAGGT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHQKARR*ARWPLG
Trigger: ACCTAAAGGCCAGCGGGCCCACCTTCGTGCCTTCTG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCAGTCCTGTGAAGAGGTaGGCAACTCGAAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSPVKR*ATRSSR
Trigger: GCGGCTACTTCGAGTTGCCCACCTCTTCACAGGACT...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCCACCACCAGGGCCTaGCTGCTGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPTTRA*LLYLSR
Trigger: CCTGCTCAAATACAGCAGCCAGGCCCTGGTGGTGGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCCCGTCGCCGTGCGTaGTGTCGTGCTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPRRRA*CRAPCC
Trigger: GCAGCAGGGAGCACGACACCACGCACGGCGACGGGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGGTCCCCGCCCAGCTaGCCGCTCTGCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGSPPS*PLCIMR
Trigger: CCTCATGATGCAGAGCGGCCAGCTGGGCGGGGACCC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGCTTCCGCTGGAACTaGGCGGCCCTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGFRWN*AALCCC
Trigger: GCAGCAGCAGAGGGCCGCCCAGTTCCAGCGGAAGCC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAAGGTGGCAGCTTGGTaGGGCCTGCAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAKVAAW*GLQRVR
Trigger: CCTCACCCGCTGCAGGCCCCACCAAGCTGCCACCTT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAAGCAAGGTGGCAGCTTaGTGGGGCCTGCAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKSKVAA*WGLQRV
Trigger: CACCCGCTGCAGGCCCCACCAAGCTGCCACCTTGCT...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCTTGTGGGCTCAGGCTaGGCCCCCGGGGCGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHLVGSG*APGAVV
Trigger: AACCACCGCCCCGGGGGCCCAGCCTGAGCCCACAAG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCCCCTCTAGTGGGCTaGGGTCCGCTGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAPLVG*GPLPSP
Trigger: AGGGGAAGGCAGCGGACCCCAGCCCACTAGAGGGGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGTCACTCCTCTGCCGCTaGATTGCCAGGTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQSLLCR*IARSAS
Trigger: GCTGGCTGACCTGGCAATCCAGCGGCAGAGGAGTGA...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTCCTCTTCCTCCTCTaGCACAGTCCTCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSVLFLL*HSPLTP
Trigger: AGGAGTGAGAGGACTGTGCCAGAGGAGGAAGAGGAC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGGCCGCTGCAGGGGTTaGCTGTGGGCGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFGRCRG*LWAAAL
Trigger: CAGCGCAGCCGCCCACAGCCAACCCCTGCAGCGGCC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTGTCCAGCCGGTCGATaGCGGCCTTCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALACPAGR*RPSGGT
Trigger: TGTGCCCCCTGAAGGCCGCCATCGACCGGCTGGACA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTAGCTGGGCCACCCTGTaGGCCACGGAGGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTSWATL*ATEGAS
Trigger: GCTGGCGCCCTCCGTGGCCCACAGGGTGGCCCAGCT...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTGGCCCCAGACACCTTaGCACTCTTGGCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKWPQTP*HSWLGT
Trigger: TGTCCCGAGCCAAGAGTGCCAAGGTGTCTGGGGCCA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTCACTCTCAGGGCTaGACAGGCGGCAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPHSQG*TGGRPL
Trigger: TAGGGGCCTGCCGCCTGTCCAGCCCTGAGAGTGAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTAGAGGGCGTCCCTGCTaGGGGTGGCCCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFRGRPC*GWPPAL
Trigger: CAGAGCCGGGGGCCACCCCCAGCAGGGACGCCCTCT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGGCCCTTCCCCAGGATaGCCTTGGCGTTGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKGPSPG*PWRCVW
Trigger: CCACACGCAACGCCAAGGCCATCCTGGGGAAGGGCC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGCGGGGGTGCCTCACTaGATACCTTCTTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQAGVPH*IPSWSS
Trigger: GGAGGACCAAGAAGGTATCCAGTGAGGCACCCCCGC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACCCCCGTGGGGGATTTaGCACCTGAGGTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREPPWGI*HLRLGV
Trigger: AACTCCTAACCTCAGGTGCCAAATCCCCCACGGGGG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGTCGGAGGCCCCCGTaGGGGATTTGGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGRRPP*GIWHLR
Trigger: CCTCAGGTGCCAAATCCCCCACGGGGGCCTCCGACC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTGCAGGTCTTGTTCTTaGGGGAGGTCACACCCTCGT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSCRSCS*GRSHPR
Trigger: ACGAGGGTGTGACCTCCCCCAAGAACAAGACCTGCA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCGGGTGCACATAGCTaGGGCTGGGCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPGAHS*GWAGAA
Trigger: GGCGGCCCCTGCCCAGCCCCAGCTATGTGCACCCGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAAGCGGGAACTCTGCCTaGCCCGCGTACTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKSGNSA*PAYLRS
Trigger: GCTGCGCAAGTACGCGGGCCAGGCAGAGTTCCCGCT...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCATTTGCTGCTGCTGCTaGGGCCTGAGCCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAICCCC*GLSPHR
Trigger: CCGGTGCGGGCTCAGGCCCCAGCAGCAGCAGCAAAT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGCCTCTTGCCCAGCTTaGTCTCCTCAGGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREASCPA*SPQGGR
Trigger: TCTACCACCCTGAGGAGACCAAGCTGGGCAAGAGGC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTCCTCGTGGCAGGACTaGTACAGCGCATTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGSSWQD*YSAFLP
Trigger: CGGCAAGAATGCGCTGTACCAGTCCTGCCACGAGGA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCAGGCGCCCGGTGGTaGGGTCGTAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPGARW*GRRCPP
Trigger: TGGCGGGCACCTACGACCCCACCACCGGGCGCCTGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATTTCTGCTTTCCCTGGTaGGAGACAGTCGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDFCFPW*ETVGGT
Trigger: AGTACCTCCGACTGTCTCCCACCAGGGAAAGCAGAA...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCACCTGACCCTCCCGTaGCCTCTGCCCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFHLTLP*PLPPAP
Trigger: CGGGGCAGGGGGCAGAGGCCACGGGAGGGTCAGGTG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACACAGCACTGCTGGCCTaGCCTCACCACCATCTACGC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHTALLA*PHHHLR
Trigger: GCGTAGATGGTGGTGAGGCCAGGCCAGCAGTGCTGT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGACAGCACTGCTGGCCTaGCCTCACCACCATCTACGC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQTALLA*PHHHLR
Trigger: GCGTAGATGGTGGTGAGGCCAGGCCAGCAGTGCTGT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGGATTTGGGCTCAGGTaGTCAGGGGGACCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGGFGLR*SGGPSF
Trigger: GAATGAGGGTCCCCCTGACCACCTGAGCCCAAATCC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTGGGGCCAGGATTTaGGCTCAGGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPGARI*AQVVRG
Trigger: CCCCCTGACCACCTGAGCCCAAATCCTGGCCCCAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTCCTCGGCCCTCTCTaGAACTCCAGTGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLLGPL*NSSGSA
Trigger: TGCTGAGCCACTGGAGTTCCAGAGAGGGCCGAGGAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCGCTGTGCGGGTCCATaGTTGGAGGCTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQRCAGP*LEAVSW
Trigger: CCAGGAAACAGCCTCCAACCATGGACCCGCACAGCG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGCTGTGCGGGTCCATaGTTGGAGGCTGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHRCAGP*LEAVSW
Trigger: CCAGGAAACAGCCTCCAACCATGGACCCGCACAGCG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTCCCAGCGGGTCCTGGTaGCCAGGCCGGGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPPSGSW*PGRAQS
Trigger: GGACTGTGCCCGGCCTGGTCACCAGGACCCGCTGGG...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCTTGCGCTCCTCGCTaGTGGCCATGGCGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPCAPR*WPWRCP
Trigger: AGGGCACCGCCATGGCCATCAGCGAGGAGCGCAAGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCAGGTTCTTCATGGCTaGGACCTCGTCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTQVLHG*DLVRRR
Trigger: GCGCCGCCGGACGAGGTCTCAGCCATGAAGAACCTG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTTTGGGAGGAGGCCCCTaGCGAGGGCCCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPLGGGP*RGPLLP
Trigger: GGGGAGCAGGGGCCCTCGTCAGGGGCCTCCTCCCAA...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCAGGTGCTGCAGGTTaGAGGCTAGCACGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPGAAG*RLARPL
Trigger: AAGAGGACGTGCTAGCCTTCAACCTGCAGCACCTGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCAGGTGCTGCAGGTTaGAGGCTAGCACGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPGAAG*RLARPL
Trigger: AAGAGGACGTGCTAGCCTTCAACCTGCAGCACCTGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTGCGTGTGGCCAGCGTaGTGGACAGGGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTCVWPA*WTGPRS
Trigger: AGAACGGGGCCCTGTCCATCACGCTGGCCACACGCA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTAAATTCCACCACTACTaGGTCCAGGTCCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPKFHHY*VQVLIF
Trigger: GAAGATGAGGACCTGGACTCAGTAGTGGTGGAATTT...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGATTCAAATCTCCCGTaGACTGCCGGTGCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREDSNLP*TAGAGN
Trigger: GTTTCCCGCACCGGCAGTTCACGGGAGATTTGAATC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGGTCCAGCCAGCAGGTaGGAAACAGGCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAGPASR*ETGPNG
Trigger: CCCATTGGGGCCTGTTTCTCACCTGCTGGCTGGACC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCCACCGTCCTCCTCTaGCGCTGGCCGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFATVLL*RWPLLA
Trigger: GGCAAGGAGCGGCCAGCGGCAGAGGAGGACGGTGGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGTGTGGTGTAGCATCTaGCGCCGCTCCAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAVWCSI*RRSRHS
Trigger: CGAGTGCCTGGAGCGGCGGCAGATGCTACACCACAC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGATCAAGTGCTGCTGGTaGCTGATGCGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQIKCCW*LMRATF
Trigger: GAAGGTGGCCCGCATCAGGCACCAGCAGCACTTGAT...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCGGCCATCAAGTGCTaGTGGTGCCTGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAAIKC*WCLMRA
Trigger: GGCCCGCATCAGGCACCAGCAGCACTTGATGGCCGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTGCTGCAGGCCACTaGCAAAGGGGTCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPAAGH*QRGPGR
Trigger: CCTACCTGGACCCCTTTGGCAGTGGCCTGCAGCAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACAGGCCCACCAAGGGTaGTTTCTGGCCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKQAHQG*FLAHHQ
Trigger: CTGGTGGTGGGCCAGAAAGCACCCTTGGTGGGCCTG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTGGTGTCGTGCTCCCTaGTGCGGGCACAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHWCRAP*CGHSPA
Trigger: GGCCGGACTGTGCCCGCAGCAGGGAGCACGACACCA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACACCTCCCCGTCGCCGTaGGTGGTGTCGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHTSPSP*VVSCSL
Trigger: CAGGGAGCACGACACCACGCACGGCGACGGGGAGGT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAATGCCCACAGGGGGCTaGCGCACCTCCCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPMPTGG*RTSPSP
Trigger: CGGCGACGGGGAGGTGCGGCAGCCCCCTGTGGGCAT...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCCGCGCAGTGTTGGTaGCGTAGGCTGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAAQCW*RRLPQT
Trigger: GGTCTGAGGCAGCCTACGGCACCAACACTGCGCGGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAGCTCCTCTCTTCTCGTaGCCCTCCCTGAGTAGAATG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHREAPLFS*PSLSRM
Trigger: CATTCTACTCAGGGAGGGGCACGAGAAGAGAGGAGC...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCTCCCCCTCCTCCCTaGTCCTCTCTTCTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTAPPPP*SSLLVP
Trigger: GGGCACGAGAAGAGAGGAGCAGGGAGGAGGGGGAGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCCTGACGAGGGCCCCTaGTCCCCCTCCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTPDEGP*SPSSLL
Trigger: GAGCAGGGAGGAGGGGGAGCAGGGGCCCTCGTCAGG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGTCCTCTCACTCCTCTaGCGCTGGATTGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHVLSLL*RWIARS
Trigger: TGACCTGGCAATCCAGCGGCAGAGGAGTGAGAGGAC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCCAGCGTGGCCAGGTaGTGCAGGTTGAAGGCTAGC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAASVAR*CRLKAS
Trigger: GCTAGCCTTCAACCTGCAGCACCTGGCCACGCTGGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTGGTCGTGCTTGCGCTaGAGGCGGGCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFWSCLR*RRASSR
Trigger: GCGGGAGCTGGCCCGCCTGCAGCGCAAGCACGACCA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACGGGGTAGCCTCCTTCTaGTGGAAAGAGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHGVASF*WKELRP
Trigger: AGGCCTCAGCTCTTTCCAGCAGAAGGAGGCTACCCC...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCCGCTCCAGGGTGGTaGCCACCTTGGCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPAPGW*PPWPSP
Trigger: CGGTGAAGGCCAAGGTGGGCACCACCCTGGAGCGGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCTTGGCTTTCTTCTTaGCCAGCGCACCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPWLSS*PAHLGA
Trigger: GGCCCCCAGGTGCGCTGGGCAAGAAGAAAGCCAAGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTGCTTGCCGGCCTTGTaGTTCACCTTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGCLPAL*FTLLSF
Trigger: GAAGCTGAGCAAGGTGAAGCACAAGGCCGGCAAGCA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCGAGAACCGCTTCCTaGAGCAGCTGCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSRTAS*SSCSSE
Trigger: CTCACTGGAGCAGCTGCTGCAGGAAGCGGTTCTCGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCTTCACTAGGCGGGGGTaGCTCACTGGATACCTTCTT +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGFTRRG*LTGYLL
Trigger: AAGAAGGTATCCAGTGAGGCACCCCCGCCTAGTGAA...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCCTGGCCCGCGTACTTaGGCAGCGCCAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTPGPRT*AAPAPW
Trigger: CCATGGGGCTGGCGCTGCGCAAGTACGCGGGCCAGG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGCGCGTGAGGGCCGCTaGCCTTGGAGCGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPAREGR*PWSAGP
Trigger: AGGCCCTGCGCTCCAAGGGCAGCGGCCCTCACGCGC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCGGCTCCGGGCCATCTaGTCATACTGCTCGCGCGCC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHRLRAI*SYCSRA
Trigger: GGCGCGCGAGCAGTATGAGCAGATGGCCCGGAGCCG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCCCCTGCCCCGAGATaGCTCTGTCGTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPPAPR*LCRPRC
Trigger: GCACCTGGGACGACAGAGGCATCTCGGGGCAGGGGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCAAGAGATCAGAGGGTaGCGTCAAGGGTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQQEIRG*RQGSHL
Trigger: CAGGTGGGACCCTTGACGGCACCCTCTGATCTCTTG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCTCAGAGCTGGGCCCTaGTTCCCGAGTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTLRAGP*FPSVPG
Trigger: CCCTGGCACACTCGGGAAGCAGGGCCCAGCTCTGAG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGTGGCTGCACCCTCTTTTGCATGCATTCTaGTTGGGGGTGAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RDEDEAAEQRIQPPWLHPLLHAF*LGVRRE
Trigger: TTCTCTCCTCACCCCCAAGCAGAATGCATGCAAAAG...AGGGTGCAGCCACGGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCCAGTGGCTCAGCATaGCCCCGTGCATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSSGSA*PRAFFF
Trigger: GAAGAAAAATGCACGGGGGCATGCTGAGCCACTGGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTAGGAGCTGGGGCCGCTaGGGTGCGTGGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPRSWGR*GAWRLP
Trigger: CGGCAGCCTCCACGCACCCCAGCGGCCCCAGCTCCT...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAGATCTGGGAGGTGGTaGGGTGGGAGCCACGGTAGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARSGRW*GGSHGR
Trigger: CCTACCGTGGCTCCCACCCCACCACCTCCCAGATCT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGTACCCCGGAGCTTCGTaGGAGTGGGAGAACCAGATC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQYPGAS*EWENQI
Trigger: GATCTGGTTCTCCCACTCCCACGAAGCTCCGGGGTA...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTTGGCCGGCAGCAGCGTaGGCTGGGGCGGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPWPAAA*AGAAGC
Trigger: GCAACCTGCCGCCCCAGCCCACGCTGCTGCCGGCCA...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCGGCCCGGGCCACGCTaGGGAAGTTGTGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTRPGPR*GSCGWP
Trigger: CGGCCAACCACAACTTCCCCAGCGTGGCCCGGGCCG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGTCCTCCTCTGCCGCTaGCCGCTCCTTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHVLLCR*PLLALS
Trigger: GCTGAGGGCAAGGAGCGGCCAGCGGCAGAGGAGGAC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGCTGAGGGGCGGGGGTaGCCCGGCGTAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPAEGRG*PGVGCG
Trigger: ACCGCATCCTACGCCGGGCCACCCCCGCCCCTCAGC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCACCAAGGGTGCTTTCTaGCCCACCACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALATKGAF*PTTRAW
Trigger: CCAGGCCCTGGTGGTGGGCCAGAAAGCACCCTTGGT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCCCGTCGCCGTGCGTaGTGTCGTGCTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPRRRA*CRAPCC
Trigger: GCAGCAGGGAGCACGACACCACGCACGGCGACGGGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGTCCAGCGCGTGTGTaGAACGGGGCCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGPARV*NGAHRH
Trigger: GTGGCGGTGGGCCCCGTTCCACACACGCGCTGGACC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCCCGGCCCCCGTACATaGGGGGCCACAGTGACGCCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFPGPRT*GATVTP
Trigger: AGGCGTCACTGTGGCCCCCCATGTACGGGGGCCGGG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCTTCGGGCTTCCGCTaGAACTGGGCGGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTSSGFR*NWAALC
Trigger: GCAGAGGGCCGCCCAGTTCCAGCGGAAGCCCGAAGA...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCAAGGTGGCAGCTTGGTaGGGCCTGCAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTKVAAW*GLQRVR
Trigger: CCTCACCCGCTGCAGGCCCCACCAAGCTGCCACCTT...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTCCTGGGTGGCCTCCCTaGCCCCTGAGAGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPPGWPP*PLRAAR
Trigger: CCGGGCTGCTCTCAGGGGCCAGGGAGGCCACCCAGG...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTAATGAGCCTGGCCGGTaGCCTCGGGGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFNEPGR*PRGPLP
Trigger: AGGCAGGGGGCCCCGAGGCCACCGGCCAGGCTCATT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTGCAGGGGTTGGCTGTaGGCGGCTGCGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFCRGWL*AAALGQ
Trigger: CTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGGCCGCTGCAGGGGTTaGCTGTGGGCGGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPGRCRG*LWAAAL
Trigger: CAGCGCAGCCGCCCACAGCCAACCCCTGCAGCGGCC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCTCTCGTCTCTCTCATaGTCGTGCTTGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKLSSLS*SCLRCR
Trigger: CCTGCAGCGCAAGCACGACCATGAGAGAGACGAGAG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGTCTCCCGGCTGCCGTaGCCCTTGGGCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTVSRLP*PLGCGC
Trigger: GCACCCACAGCCCAAGGGCCACGGCAGCCGGGAGAC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCAGCCACGGAGGGCTaGGCTGGGCACCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAATEG*AGHLGV
Trigger: GACACCCAGGTGCCCAGCCCAGCCCTCCGTGGCTGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCTCACTCTCAGGGCTaGACAGGCGGCAGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPHSQG*TGGRPL
Trigger: TAGGGGCCTGCCGCCTGTCCAGCCCTGAGAGTGAGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGGGCCCGCTCCAGGGTaGTGCCCACCTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHGPAPG*CPPWPS
Trigger: TGAAGGCCAAGGTGGGCACCACCCTGGAGCGGGCCC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGGTCGGAGGCCCCCGTaGGGGATTTGGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHGRRPP*GIWHLR
Trigger: CCTCAGGTGCCAAATCCCCCACGGGGGCCTCCGACC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCTGCTGCCGTTGAGCTaGAAGAGGTTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHLLPLS*KRFCST
Trigger: GGTGCTGCAGAACCTCTTCCAGCTCAACGGCAGCAG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAAAGCCGTTGCCAAATATaGGTGTGGCCACGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRESRCQI*VWPRCA
Trigger: TGCACAGCGTGGCCACACCCATATTTGGCAACGGCT...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGAGGTCACACCCTCGTaGTCCAGCTTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKEVTPS*SSLTRN
Trigger: GTTCCTGGTCAAGCTGGACCACGAGGGTGTGACCTC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCACATAGCTGGGGCTaGGCAGGGGCCGCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAHSWG*AGAARA
Trigger: AGCTCGGGCGGCCCCTGCCCAGCCCCAGCTATGTGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCGGAGGAGCAGAGGCTaGAGGTGGACACGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTRRSRG*RWTRSL
Trigger: CAGGCTCCGTGTCCACCTCCAGCCTCTGCTCCTCCG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCAGCCACCGTGGCCCTaGACAGGAAGCAGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHQPPWP*TGSSAG
Trigger: CCCAGCGCTGCTTCCTGTCCAGGGCCACGGTGGCTG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTGCCACGCCGCTGTGTaGGATTCCCCGACCACTTCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALACHAAV*DSPTTS
Trigger: GGAAGTGGTCGGGGAATCCCACACAGCGGCGTGGCA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCTCGTGGCAGGACTaGTACAGCGCATTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSSWQD*YSAFLP
Trigger: CGGCAAGAATGCGCTGTACCAGTCCTGCCACGAGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACACGACCTGGCACTTGTaGGAGATGGTCTGCACGTCG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHTTWHL*EMVCTS
Trigger: CGACGTGCAGACCATCTCCCACAAGTGCCAGGTCGT...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGACGACCTGGCACTTGTaGGAGATGGTCTGCACGTCG +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKTTWHL*EMVCTS
Trigger: CGACGTGCAGACCATCTCCCACAAGTGCCAGGTCGT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTCGCGCGCCACGACCTaGCACTTGTGGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALASRATT*HLWEMV
Trigger: GACCATCTCCCACAAGTGCCAGGTCGTGGCGCGCGA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTAGGTCCTGCCGGTCCTaGCACTTGCGGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTRSCRS*HLRLRA
Trigger: GGCCCGGAGCCGCAAGTGCCAGGACCGGCAGGACCT...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCGATTTCTGCTTTCCCTaGTGGGAGACAGTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSDFCFP*WETVGG
Trigger: ACCTCCGACTGTCTCCCACCAGGGAAAGCAGAAATC...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AACCCAGCAGAAGCGGGACGAGGACGAGGCGGCGGAGCAGAGGATCCAACCTCCTCACACTCCCTGGTCTaGGCTTTGCCTCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: NPAEAGRGRGGGAEDPTSSHSLV*ALPLES
Trigger: GGATTCAAGAGGCAAAGCCCAGACCAGGGAGTGTGA...GGAGGTTGGATCCTCTGCTCCGCCGCCTCGTCCTCGTCCCGCTTCTGCTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGGAGGAGAGAATCTGGTaGGACTGTGAACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGEERIW*DCEPAL
Trigger: GAGGGCAGGTTCACAGTCCCACCAGATTCTCTCCTC...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGGGATTTGGGCTCAGGTaGTCAGGGGGACCCTCATTC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQGFGLR*SGGPSF
Trigger: GAATGAGGGTCCCCCTGACCACCTGAGCCCAAATCC...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGAGGCTGAAGGCTGTTaGGCTCAGGTCCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKEAEGC*AQVQAA
Trigger: GGCTGCCTGGACCTGAGCCCAACAGCCTTCAGCCTC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
3UTR CAA 72 bp GAAAGCCTGGGTCTTGCCCTGTGGGCTTTTGCATATTaGCTCAGATGCGCCCTTGGGAGGCCGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ESLGLALWAFAY*LRCALGRPGLP
Trigger: AGGCAGCCCCGGCCTCCCAAGGGCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCAAGACCCAGGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGATGCAGCTGGCCTTaGGGCCACCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGCSWP*GHPGPP
Trigger: TGGTGGGCCTGGGTGGCCTCAAGGCCAGCTGCATCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTCGGCCGTGGACTGCTaGCCCTCCCCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALASAVDC*PSPFFS
Trigger: GGAAAAGAATGGGGAGGGTCAGCAGTCCACGGCCGA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTAGGCCCGAGAGGGGTTaGAGAGGGCGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFRPERG*RGRPCW
Trigger: CCAGCAGGGACGCCCTCTTCAACCCCTCTCGGGCCT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTGCGCGTGGCCCTCTTaGGGCGCTCACTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFCAWPS*GAHWPA
Trigger: AGCTGGCCAGTGAGCGCCTCAAGAGGGCCACGCGCA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGTCAAGGGTCCCACCTaGCCCTCCCGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTVKGPT*PSRGLC
Trigger: GCAGAGGCCACGGGAGGGTCAGGTGGGACCCTTGAC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCATTCTGCTTGGGGGTaGGGAGAGAATCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKHSAWG*GENLVG
Trigger: TCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTCGCTCCGACAGCAGATaGGGCGGCGGCGCAAAGTCG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFRSDSR*GGGAKS
Trigger: CGACTTTGCGCCGCCGCCGCATCTGCTGTCGGAGCG...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCGGCTGCTGGCTGTGTaGGAAGCCATGGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHRLLAV*EAMGNG
Trigger: GCCGTTGCCCATGGCTTCGCACACAGCCAGCAGCCG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTTCCCATCAGGCGGCTaGTGGCTGTGTGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAFPSGG*WLCAKP
Trigger: TGGCTTCGCACACAGCCAGCAGCCGCCTGATGGGAA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATTCCCATCAGGCGGCTaGTGGCTGTGTGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKFPSGG*WLCAKP
Trigger: TGGCTTCGCACACAGCCAGCAGCCGCCTGATGGGAA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGACCCATGAGGGCCACAGCCCGACCCTCCGCAGAGGATGGGACGGGACTGGATGCCCATAGAGAACGTTaGTGTTTCCATGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: GPMRATARPSAEDGTGLDAHRER*CFHGDP
Trigger: TGGATCACCATGGAAACAGCAACGTTCTCTATGGGC...ATCCAGTCCCGTCCCATCCTCTGCGGAGGGTCGGGCTGTGGCCCTCATGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATGCCCGCCTTCTCTCTaGCCAGCTCTTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKCPPSL*PALCPR
Trigger: TCGTGGGCAAAGAGCTGGGCAGAGAGAAGGCGGGCA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGCCACCGTCCTCCTCTaGCGCTGGCCGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPATVLL*RWPLLA
Trigger: GGCAAGGAGCGGCCAGCGGCAGAGGAGGACGGTGGC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGCTTGTGCCGCTCCTTaGCACCGTCCTCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHACAAP*HRPPLP
Trigger: CGGCAGAGGAGGACGGTGGCAAGGAGCGGCACAAGC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCGTCAGGGCCCCCGTaGAGCTGCAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPSGPP*SCRQGK
Trigger: CTTCCCCTGCCTGCAGCTGCACGGGGGCCCTGACGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCAGGTGCCGGTCCTTaGCCTCCCCTGCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPGAGP*PPLPRH
Trigger: GTGCCGTGGCAGGGGAGGGCAAGGACCGGCACCTGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAACGGCCGGGGCTTCCTTaGCAACAGTCTTATCTAAAG +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRERPGLP*QQSYLK
Trigger: CTTTAGATAAGACTGTTGGCAAGGAAGCCCCGGCCG...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTACCTCCCCGTCGCCGTaGGTGGTGTCGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFTSPSP*VVSCSL
Trigger: CAGGGAGCACGACACCACGCACGGCGACGGGGAGGT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGTTGGTGCCGTAGGCTaGCTCAGACCGGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAVGAVG*LRPAHC
Trigger: ACAGTGAGCCGGTCTGAGGCAGCCTACGGCACCAAC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGGCAGACATTTAAAGTaGACGGGGCGCTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKGRHLK*TGRWAE
Trigger: CTCGGCCCAGCGCCCCGTGCACTTTAAATGTCTGCC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCCGGGGCGGTGGTTTaGATAGTTTCAGGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPGAVV*IVSGSS
Trigger: CGAGGACCCTGAAACTATGCAAACCACCGCCCCGGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGAGGAGGGCCGCACATTaGAGTTCTTGTAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKRRAAH*SSCSPS
Trigger: AGAGGGGCTACAAGAACTGCAATGTGCGGCCCTCCT...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGACTCCCTGCTCGCTaGTCCAGGACTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGLPAR*SRTWEE
Trigger: CTCCTCCCAAGTCCTGGAGCAGCGAGCAGGGAGTCC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTTCCTCAGGGGCCGGCTaGTCCCCCTCGTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTSSGAG*SPSSSR
Trigger: CCTTGAGGACGAGGGGGAGCAGCCGGCCCCTGAGGA...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCGCATCCCCACCTCCTaGGTGTCCAGCCGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHRIPTS*VSSRSM
Trigger: CATCGACCGGCTGGACACGCAGGAGGTGGGGATGCG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCGAGCTTGAGTGTTTaGGCTTCCTCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTASLSV*ASSAGQ
Trigger: CTGGCCGGCCGAGGAAGCGCAAACACTCAAGCTCGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACAGGCTCGCCCCCACTaGCTCCTCGCAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPQARPH*LLAAPH
Trigger: GTGCGGAGCTGCGAGGAGGCAGTGGGGGCGAGCCTG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCCCGCCCTGACAGCTaGTCTTCTTACACTGCGCCT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAARPDS*SSYTAP
Trigger: AGGCGCAGTGTAAGAAGAGCAGCTGTCAGGGCGGGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTTGGGTGTCTCCCGGCTaGCGTGGCCCTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTWVSPG*RGPWAV
Trigger: CACAGCCCAAGGGCCACGGCAGCCGGGAGACACCCA...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGTGCAGCAGCAGCCCTaGTTCCCTGGGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHVQQQP*FPGWCL
Trigger: GAGGCACCACCCAGGGAAGCAGGGCTGCTGCTGCAC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCCTTCCGCTTGGTCTaGGCCACCGCGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAFRLV*ATADQL
Trigger: GAGCTGGTCCGCGGTGGCGCAGACCAAGCGGAAGGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCGGCGCGGAAGCCGTTaGCAAATATGGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARRGSR*QIWVWP
Trigger: TGGCCACACCCATATTTGGCAACGGCTTCCGCGCCG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACGGCGCGGAAGCCGTTaGCAAATATGGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKRRGSR*QIWVWP
Trigger: TGGCCACACCCATATTTGGCAACGGCTTCCGCGCCG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAACGTCGCACTGCCTCTTaGCCAGCTTGGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKRRTAS*PAWSPQ
Trigger: CTGAGGAGACCAAGCTGGGCAAGAGGCAGTGCGACG...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGTGGCCTCTGCCCCCTaGCCCGAGATGCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFVASAP*PEMPLS
Trigger: CGACAGAGGCATCTCGGGGCAGGGGGCAGAGGCCAC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGCCCTGGTCTGGGCTTTaGCTCTTGAATCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKPWSGL*LLNPFP
Trigger: GGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGG...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp ATCTGGTGGGACTGTGAACCTGCCCTCATAGGCCCCGAGCCCTGCCCAGTTCAGCCCTGGTCTGGGCTTTaGCTCTTGAATCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: IWWDCEPALIGPEPCPVQPWSGL*LLNPFP
Trigger: GGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGG...CTGAACTGGGCAGGGCTCGGGGCCTATGAGGGCAGGTTCACAGTCCCACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTCCTGCTTCCCGAGTGTaGCAGGGCGGCGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTPASRV*QGGEGE
Trigger: CTCACCCTCGCCGCCCTGGCACACTCGGGAAGCAGG...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCCCATCAGGCCATCTaGCCCACCAAGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAAHQAI*PTKWHR
Trigger: TCTGTGCCACTTGGTGGGGCAGATGGCCTGATGGGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGCCCTCGAGGGGTGCTaGTTGCACCTGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTALEGC*LHLGPG
Trigger: TCCTGGCCCCAGGTGCAAGCAGCACCCCTCGAGGGC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCACGGGTAGGAAGGTaGATGCCAGACTCCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSRVGR*MPDSPK
Trigger: TTTCGGGGAGTCTGGCATCCACCTTCCTACCCGTGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTCCGGCCTCTCCGACTaGCCTGGGCCCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHSGLSD*PGPLED
Trigger: GTCCTCTAAGGGCCCAGGCCAGTCGGAGAGGCCGGA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCTGCCGCGCAGTGTTaGTGCCGTAGGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPAAQC*CRRLPQ
Trigger: CTGAGGCAGCCTACGGCACCAACACTGCGCGGCAGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGGTCCAGCGCGTGTGTaGAACGGGGCCCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPGPARV*NGAHRH
Trigger: GTGGCGGTGGGCCCCGTTCCACACACGCGCTGGACC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCAGCTGCTCGGTGGGTaGATCCGGGCGAACTCTACG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTQLLGG*IRANST
Trigger: CGTAGAGTTCGCCCGGATCCACCCACCGAGCAGCTG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGGTCCCCGCCCAGCTaGCCGCTCTGCATCATGAGG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGSPPS*PLCIMR
Trigger: CCTCATGATGCAGAGCGGCCAGCTGGGCGGGGACCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGCTTCCGCTGGAACTaGGCGGCCCTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGFRWN*AALCCC
Trigger: GCAGCAGCAGAGGGCCGCCCAGTTCCAGCGGAAGCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGTCCGGGAGGCAGGTCTaGTTCGGATGTGATGATGTC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKSGRQV*FGCDDV
Trigger: GACATCATCACATCCGAACCAGACCTGCCTCCCGGA...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307745.8
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTAGCCCAGGCCAGCCATaGGGCGCAGGTATCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFSPGQP*GAGIRE
Trigger: CTCCCGGATACCTGCGCCCCATGGCTGGCCTGGGCT...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTAGCCCAGGCCAGCCATaGGGCGCAGGTATCCGGGAG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTSPGQP*GAGIRE
Trigger: CTCCCGGATACCTGCGCCCCATGGCTGGCCTGGGCT...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTAATGAGCCTGGCCGGTaGCCTCGGGGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPNEPGR*PRGPLP
Trigger: AGGCAGGGGGCCCCGAGGCCACCGGCCAGGCTCATT...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGCTGCGCTGGGGCAGTaGAGCTGTCCAGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPAALGQ*SCPGQR
Trigger: CCGCTGGCCTGGACAGCTCCACTGCCCCAGCGCAGC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTTGTGGGCGGCTGCGCTaGGGCAGTGGAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTCGRLR*GSGAVQ
Trigger: CTGGACAGCTCCACTGCCCCAGCGCAGCCGCCCACA...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTCTTGCCATCGCTCCTaGGGAGCGGCCCCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFSCHRS*GAAPWD
Trigger: GTCCCACGGGGCCGCTCCCCAGGAGCGATGGCAAGA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGGCCCGCTCCAGGGTaGTGCCCACCTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGPAPG*CPPWPS
Trigger: TGAAGGCCAAGGTGGGCACCACCCTGGAGCGGGCCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCTTCCGCCGCAGCACTaGCTGCAGCACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTLPPQH*LQHCAL
Trigger: AAGGGCACAGTGCTGCAGCCAGTGCTGCGGCGGAAG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCGGGGGTGCCTCACTaGATACCTTCTTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAAGVPH*IPSWSS
Trigger: GGAGGACCAAGAAGGTATCCAGTGAGGCACCCCCGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGTCGGAGGCCCCCGTaGGGGATTTGGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGRRPP*GIWHLR
Trigger: CCTCAGGTGCCAAATCCCCCACGGGGGCCTCCGACC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCACCGCCTTCCGCTTaGTCTGCGCCACCGCGGACC +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPPPSA*SAPPRT
Trigger: GGTCCGCGGTGGCGCAGACCAAGCGGAAGGCGGTGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTGCAGGTCTTGTTCTTaGGGGAGGTCACACCCTCGT +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHCRSCS*GRSHPR
Trigger: ACGAGGGTGTGACCTCCCCCAAGAACAAGACCTGCA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGCACATAGCTGGGGCTaGGCAGGGGCCGCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPAHSWG*AGAARA
Trigger: AGCTCGGGCGGCCCCTGCCCAGCCCCAGCTATGTGC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCGGGAGAGCTCTTTaGCTTTGGAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSGRAL*LWRSSG
Trigger: CCCTGAGCTTCTCCAAAGCCAAAGAGCTCTCCCGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACTGCCTCCTGCCCGGTaGCTTGGCCGACGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPLPPAR*LGRRQA
Trigger: AGCCTGGCGTCGGCCAAGCCACCGGGCAGGAGGCAG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAGGATGGGACGGGACTaGATTCCGACACCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARMGRD*IPTPGA
Trigger: CGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCGCAGAGGATGGGACGGGACTGGATTCCGACACCTGGAGCGCTCTTTCCAGGGTTCTGCTTTCCCTGGTaGGAGACAGTCGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: PQRMGRDWIPTPGALFPGFCFPW*ETVGGT
Trigger: AGTACCTCCGACTGTCTCCCACCAGGGAAAGCAGAA...CCCTGGAAAGAGCGCTCCAGGTGTCGGAATCCAGTCCCGTCCCATCCTCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGGAGGCCAGACTCCTTaGCCTCAGACCAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTGGQTP*PQTNWP
Trigger: GGGCCAGTTGGTCTGAGGCCAAGGAGTCTGGCCTCC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAACAGCACTGCTGGCCTaGCCTCACCACCATCTACGC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKTALLA*PHHHLR
Trigger: GCGTAGATGGTGGTGAGGCCAGGCCAGCAGTGCTGT...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAAGTCTGTCCTTGGCTGTaGGAGAAGGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKVCPWL*EKGRGV
Trigger: CACACCCCTCCCCTTCTCCCACAGCCAAGGACAGAC...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp CCTGGCCTCACCACCATCTACGCAGCAGGCCAGGGGTTTGGGGGCACCAATAAGGAGCAGTGGCTAACTTaGGGGGCTTTCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGLTTIYAAGQGFGGTNKEQWLT*GAFLKL
Trigger: GAGCTTCAGGAAAGCCCCCCAAGTTAGCCACTGCTC...CTTATTGGTGCCCCCAAACCCCTGGCCTGCTGCGTAGATGGTGGTGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp ACGTTAACCACGGTGAGAGGGGAGGGGCCGCACCATTCGCACGCACACAGAAAATCTCTGGAACTCCAGTaGCTCAGCATGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: TLTTVRGEGPHHSHAHRKSLELQ*LSMPPC
Trigger: GCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGA...TTTTCTGTGTGCGTGCGAATGGTGCGGCCCCTCCCCTCTCACCGTGGTTAACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTCTCTGGAACTCCAGTaGCTCAGCATGCCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALASLELQ*LSMPPC
Trigger: GCACGGGGGCATGCTGAGCCACTGGAGTTCCAGAGA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACAGGATCCAACCTCCGTaGCTGCACCCTCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHRIQPP*LHPPRP
Trigger: GGGCCGAGGAGGGTGCAGCCACGGAGGTTGGATCCT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACAGCACGCGGGAGGACTaGGCTTCTCGGCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHSTRED*ASRRAA
Trigger: GGCCGCCCGCCGAGAAGCCCAGTCCTCCCGCGTGCT...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000584436.7
ENST00000675386.2
3UTR CAA 72 bp TGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTaGCCTCTTGAATCCTTTCCCCACGGGCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: CSRLLSHSLVWA*PLESFPHGPLI
Trigger: GATGAGGGGCCCGTGGGGAAAGGATTCAAGAGGCAAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTCCTTGCGCTCCTCGCTaGTGGCCATGGCGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPPCAPR*WPWRCP
Trigger: AGGGCACCGCCATGGCCATCAGCGAGGAGCGCAAGG...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCCTGGCTGCTGTATTTaGGCAGGTTCTTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHPGCCI*AGSSWL
Trigger: CAGCCATGAAGAACCTGCTCAAATACAGCAGCCAGG...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGGATGCAGCTGGCCTTaGGGCCACCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPGCSWP*GHPGPP
Trigger: TGGTGGGCCTGGGTGGCCTCAAGGCCAGCTGCATCC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCCCGTGCAGGGCTCCGTaGACTCTCGTCTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTPCRAP*TLVSLM
Trigger: CATGAGAGAGACGAGAGTTCACGGAGCCCTGCACGG...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAAGGCCCGAGAGGGGTTaGAGAGGGCGTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPRPERG*RGRPCW
Trigger: CCAGCAGGGACGCCCTCTTCAACCCCTCTCGGGCCT...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTGCGTGTGGCCAGCGTaGTGGACAGGGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFCVWPA*WTGPRS
Trigger: AGAACGGGGCCCTGTCCATCACGCTGGCCACACGCA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTATCCTCCTTGGGGATaGGCACGGGCAGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFYPPWG*ARAARP
Trigger: GGGACGGGCTGCCCGTGCTCATCCCCAAGGAGGATA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGTGGCTGCAGGGTCCTaGCGCTGCCCGCGTACAGCA +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPVAAGS*RCPRTA
Trigger: TGCTGTACGCGGGCAGCGTCAGGACCCTGCAGCCAC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAGTCCTTGTCCCCCATaGGCAACGCCTTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALASPCPP*ATPCRS
Trigger: AGACCTGCAAGGCGTTGCTCATGGGGGACAAGGACT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGTGGACACGGAGCCTaGGGAGGAGGAGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGGHGA*GGGGGR
Trigger: TCGTCCACCTCCTCCTCCTCAGGCTCCGTGTCCACC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR TCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCGGGTCCTCGTCGTCTaGGCTGTAGGACGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHRVLVV*AVGRVL
Trigger: GAGGACTCGTCCTACAGCTCAGACGACGAGGACCCG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGGGGTGCGTGGAGGCTaGCGAGCCCAGGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHGVRGG*RAQAAG
Trigger: ACCAGCAGCCTGGGCTCGGCAGCCTCCACGCACCCC...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGTGTGGTGTAGCATCTaGCGCCGCTCCAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHVWCSI*RRSRHS
Trigger: CGAGTGCCTGGAGCGGCGGCAGATGCTACACCACAC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGCGGCCATCAAGTGCTaGTGGTGCCTGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTAAIKC*WCLMRA
Trigger: GGCCCGCATCAGGCACCAGCAGCACTTGATGGCCGC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCAGGCCCACCAAGGGTaGTTTCTGGCCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHQAHQG*FLAHHQ
Trigger: CTGGTGGTGGGCCAGAAAGCACCCTTGGTGGGCCTG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTGTCGTGCTCCCTGCTaGGGGCACAGTCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFCRAPC*GHSPAS
Trigger: AGAGGCCGGACTGTGCCCGCAGCAGGGAGCACGACA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCATCTTTTCCTCGGCGCTaGGCACCCGGGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPSFPRR*APGSQA
Trigger: GGCCTGGCTCCCGGGTGCGCAGCGCCGAGGAAAAGA...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGCACCCGGACTCCCTaGTCGCTGCTCCAGGACTTG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGTRTP*SLLQDL
Trigger: CAAGTCCTGGAGCAGCGAGCAGGGAGTCCGGGTGCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGCGAGCTTGAGTGTTTaGGCTTCCTCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHASLSV*ASSAGQ
Trigger: CTGGCCGGCCGAGGAAGCGCAAACACTCAAGCTCGC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCGCTCCTCTCCAGCTTaGTTCGCTTCTTCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALARSSPA*FASSQA
Trigger: AGCCTGCGAAGAAGCGAAGCAAGCTGGAGAGGAGCG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCGCCCGCCCTGACAGCTaGTCTTCTTACACTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SLDIVLIPEPQAGPRPTTARPDS*SSYTAP
Trigger: AGGCGCAGTGTAAGAAGAGCAGCTGTCAGGGCGGGC...GGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCCTTGGGCTGTGGGTaGCGTGTGGCCCCAGACACC +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPLGCG*RVAPDT
Trigger: GGTGTCTGGGGCCACACGGCACCCACAGCCCAAGGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTCCCTTGGGCTGTGGGTaGCGTGTGGCCCCAGACACC +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPPLGCG*RVAPDT
Trigger: GGTGTCTGGGGCCACACGGCACCCACAGCCCAAGGG...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCCGCTCCAGGGTGGTaGCCACCTTGGCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPAPGW*PPWPSP
Trigger: CGGTGAAGGCCAAGGTGGGCACCACCCTGGAGCGGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACGGCCCTTGCCCTGCTTaGCGGCCTTGTGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHGPCPA*RPCASP
Trigger: AGGTGAAGCACAAGGCCGGCAAGCAGGGCAAGGGCC...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTCCAAAGGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGGCGGCGCTCTGCTCTaGGCTCAGAGGGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: FPKETPGQKSPHTRTHIHGGALL*AQRAAV
Trigger: GACAGCGGCCCTCTGAGCGCAGAGCAGAGCGCCGCC...GTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCCTTTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTTTCGGGGCCGTCCTGTaGTTTGGGGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFFGAVL*FGGQAG
Trigger: CCCAGCCTGTCCCCCAAAGCACAGGACGGCCCCGAA...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTTTCGGGGCCGTCCTGTaGTTTGGGGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTFGAVL*FGGQAG
Trigger: CCCAGCCTGTCCCCCAAAGCACAGGACGGCCCCGAA...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTCCCCTTGCTGGCCGCTaGCACCGCCTTCCGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPPLAGR*HRLPLG
Trigger: ACCAAGCGGAAGGCGGTGGCAGCGGCCAGCAAGGGG...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACAGCTGGAAGAGGTTCTaGAGCACCCCCGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHSWKRF*STPGPL
Trigger: CAAGGGGCCGGGGGTGCTGCAGAACCTCTTCCAGCT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGGGCAGCGGGAACTCTaGCTGGCCCGCGTACTTGCG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPGQREL*LARVLA
Trigger: CGCAAGTACGCGGGCCAGGCAGAGTTCCCGCTGCCC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGCCCTGTGGGCTTTTaGATATTTGCTCAGATGCGC +
Preference number: 4 (lower is better)
Translates to: PEPQAGPRPTTSPDNHRECPVGF*IFAQMR
Trigger: GCGCATCTGAGCAAATATGCAAAAGCCCACAGGGCA...TTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCAAATCTCCCGTGAACTaGCGGTGCGGGAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAKSPVN*RCGKRR
Trigger: CCTCCGTTTCCCGCACCGGCAGTTCACGGGAGATTT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCAACACACCTGATTTCTaGTTTCCCTGGTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGNTPDF*FPWWET
Trigger: TGTCTCCCACCAGGGAAAGCAGAAATCAGGTGTGTT...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCACCTGCTTCCCGAGTGTaGCAGGGCGGCGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPPASRV*QGGEGE
Trigger: CTCACCCTCGCCGCCCTGGCACACTCGGGAAGCAGG...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CAAGGGGACCTGGGATTGGGGTACAGGGCACCCACCAGCACCCTGCTTCGAGGCCTTTTGCATGCATTCTaGTTGGGGGTGAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QGDLGLGYRAPTSTLLRGLLHAF*LGVRRE
Trigger: TTCTCTCCTCACCCCCAAGCAGAATGCATGCAAAAG...GCCTCGAAGCAGGGTGCTGGTGGGTGCCCTGTACCCCAATCCCAGGTCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR GCA 90 bp CTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACAACCACTCCAGTGGCTCAGCATaGCCCCGTGCATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIPEPQAGPRPTTSPDNHSSGSA*PRAFFF
Trigger: GAAGAAAAATGCACGGGGGCATGCTGAGCCACTGGA...GTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCTGCTTGAGGCTCGGGGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCCATCAGGCGGCTGCTaGCTGTGTGCGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHPSGGC*LCAKPW
Trigger: CCATGGCTTCGCACACAGCCAGCAGCCGCCTGATGG...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCTACCCCGGAGCTTCGTaGGAGTGGGAGAACCAGATC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAYPGAS*EWENQI
Trigger: GATCTGGTTCTCCCACTCCCACGAAGCTCCGGGGTA...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACTGGGGAAGTTGTGGTTaGCCGGCAGCAGCGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHWGSCG*PAAAWA
Trigger: AGCCCACGCTGCTGCCGGCCAACCACAACTTCCCCA...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACAGCGGTCGAAGTCCTTaGGGCCCTTCTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNPRTKIATHAHTHTRSHSGRSP*GPSAGS
Trigger: GCTCCCTGCAGAAGGGCCCCAAGGACTTCGACCGCT...GTGTGAGCGTGTATGTGTGTGCGCGTGTGTGGCGATTTTTGTCCTGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGCAGTGCCCGTCGGCTaGCACGGGCAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPAVPVG*HGQHQL
Trigger: AAGCTGGTGCTGCCCGTGCCAGCCGACGGGCACTGC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTTCTTCACTTGACATCGTTCTGATCCCCGAGCCTCAAGCAGGACCTCGTCCAGCAGTGCCCGTCGGCTaGCACGGGCAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSSLDIVLIPEPQAGPRPAVPVG*HGQHQL
Trigger: AAGCTGGTGCTGCCCGTGCCAGCCGACGGGCACTGC...TGGACGAGGTCCTGCTTGAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTTGCCCCCTGCACAGCTaGCTAGCGCAGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPCPLHS*LAQPCP
Trigger: TGGGCAGGGCTGCGCTAGCCAGCTGTGCAGGGGGCA...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTTGCATGCATTCTGCTTGGGGGTGAGGAGAGAATCTGGTGGGACTGTGAACCTGCAGCAGCTCGCGGCTaGCAAGCCCCAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: FACILLGGEERIWWDCEPAAARG*QAPGGH
Trigger: ATGACCGCCTGGGGCTTGCCAGCCGCGAGCTGCTGC...AGGTTCACAGTCCCACCAGATTCTCTCCTCACCCCCAAGCAGAATGCATGCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCACACCTTGGCACTCTTaGCTCGGGACAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALATPWHS*LGTASP
Trigger: GGGAGAAGCTGTCCCGAGCCAAGAGTGCCAAGGTGT...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGCAGCCCTGCTTCCCTaGGTGGTGCCTCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTAALLP*VVPLSP
Trigger: TGGGGACAGAGGCACCACCCAGGGAAGCAGGGCTGC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTGGGTGGTGCCCACCTTaGCCTTCACCGACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTGWCPP*PSPTAS
Trigger: AGAGGCGGTCGGTGAAGGCCAAGGTGGGCACCACCC...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCGCTATAGATGTCGGGTaGCTGCAGGGTCCTGACGCT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAAIDVG*LQGPDA
Trigger: AGCGTCAGGACCCTGCAGCCACCCGACATCTATAGC...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp TTGAACACAGGTGAGATGCTCACGGCTGTTGTCACACTCCCTGGTCTGGGCTTTGCGGGAGGTACCGGCTaGACTGTGGCCGCACATCGA +
Preference number: 4 (lower is better)
Translates to: LNTGEMLTAVVTLPGLGFAGGTG*TVAAHR
Trigger: TCGATGTGCGGCCACAGTCCAGCCGGTACCTCCCGC...AAAGCCCAGACCAGGGAGTGTGACAACAGCCGTGAGCATCTCACCTGTGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GATTTGGGCTCAGGTGGTCAGGGGGACCCTCATTCTATGCCCCAAGCACTAGCCCCCCCGTGGGGGATTTaGCACCTGAGGTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DLGSGGQGDPHSMPQALAPPWGI*HLRLGV
Trigger: AACTCCTAACCTCAGGTGCCAAATCCCCCACGGGGG...GGCTAGTGCTTGGGGCATAGAATGAGGGTCCCCCTGACCACCTGAGCCCAAATC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp AGGACCTCGTCCAACCACCTCCCCAGACAACCACCGGGAATGAAATATTGCACTAGCGGGAACTCTGCCTaGCCCGCGTACTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTSSNHLPRQPPGMKYCTSGNSA*PAYLRS
Trigger: GCTGCGCAAGTACGCGGGCCAGGCAGAGTTCCCGCT...AGTGCAATATTTCATTCCCGGTGGTTGTCTGGGGAGGTGGTTGGACGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307745.8
ENST00000584436.7
ENST00000675386.2
CDS-3UTR CCA 90 bp GGAAACCCCAGGACAAAAATCGCCACACACGCGCACACACATACACGCTCACACCGATGTAGGGGAGGTTaGGCCGCCCAGCTGACAGGA +
Preference number: 4 (lo