RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000166170

Ensembl transcript IDs: ENST00000299204.6, ENST00000337322.4, ENST00000445922.2

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGCCTTGAGCCCGCGGTTGCCAGGAGTTGGACCTGCAGTAGTATaGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCCCACCG +
Preference number: 1 (lower is better)
Translates to: PALSPRLPGVGPAVV*EAHGLNTDCPLTPP
Trigger: CGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 90 bp ATTCCAATGACCTGCCTTGAGCCCGCGGTTGCCAGGAGTTGGACCTaGAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCT +
Preference number: 1 (lower is better)
Translates to: IPMTCLEPAVARSWT*SSMGSSRPKYRLPS
Trigger: AGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CCA 90 bp ACGTGGATTCCAATGACCTGCCTTGAGCCCGCGGTTGCCAGGAGTTaGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTG +
Preference number: 1 (lower is better)
Translates to: TWIPMTCLEPAVARS*TCSSMGSSRPKYRL
Trigger: CAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 90 bp AGCAATCCTACAACTACTGTGGCCAAAACGTGGATTCCAATGACCTaGCTTGAGCCCGCGGTTGCCAGGAGTTGGACCTGCAGTAGTATG +
Preference number: 1 (lower is better)
Translates to: SNPTTTVAKTWIPMT*LEPAVARSWTCSSM
Trigger: CATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR TCA 90 bp AGAAAAGCAATCCTACAACTACTGTGGCCAAAACGTGGATTCCAATaGCCTGCCTTGAGCCCGCGGTTGCCAGGAGTTGGACCTGCAGTA +
Preference number: 1 (lower is better)
Translates to: RKAILQLLWPKRGFQ*PALSPRLPGVGPAV
Trigger: TACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGATTGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 90 bp GTTGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTaGCCTCTGACCCCACCGTCCAGCGATTCTAGAACATTTCTAGTA +
Preference number: 1 (lower is better)
Translates to: VGPAVVWEAHGLNTD*PLTPPSSDSRTFLV
Trigger: TACTAGAAATGTTCTAGAATCGCTGGACGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR TCA 90 bp AATGGCTCTTTCAGGCAACAGAGAAACCACCACATGCCCATGACATaGGCTCAGTTGTTCAGCAGGCACCCAGAGGAAGCCTTTAATTCC +
Preference number: 1 (lower is better)
Translates to: NGSFRQQRNHHMPMT*AQLFSRHPEEAFNS
Trigger: GGAATTAAAGGCTTCCTCTGGGTGCCTGCTGAACAACTGAGCTCATGTCATGGGCATGTGGTGGTTTCTCTGTTGCCTGAAAGAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CCA 90 bp ATTATGATACAGAAAAGCAATCCTACAACTACTGTGGCCAAAACGTaGATTCCAATGACCTGCCTTGAGCCCGCGGTTGCCAGGAGTTGG +
Preference number: 1 (lower is better)
Translates to: IMIQKSNPTTTVAKT*IPMTCLEPAVARSW
Trigger: CCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGATTGCTTTTCTGTATCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 90 bp CCACGAAGGCCGACAAGAGCTAAATCCGGTGTCAACAGGGTTCATTaGAGGAGTAGAATAATCCGGTACAAGGAACGAGAACAGATTGAA +
Preference number: 1 (lower is better)
Translates to: PRRPTRAKSGVNRVH*RSRIIRYKEREQIE
Trigger: TTCAATCTGTTCTCGTTCCTTGTACCGGATTATTCTACTCCTGCAATGAACCCTGTTGACACCGGATTTAGCTCTTGTCGGCCTTCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 90 bp TCCGGTACAAGGAACGAGAACAGATTGAAACCAGAAACAAAGCCATaGCTGACAGTCAATCAAGGTCAATCTGATCATTTCCATGACCAA +
Preference number: 1 (lower is better)
Translates to: SGTRNENRLKPETKP*LTVNQGQSDHFHDQ
Trigger: TTGGTCATGGAAATGATCAGATTGACCTTGATTGACTGTCAGGCATGGCTTTGTTTCTGGTTTCAATCTGTTCTCGTTCCTTGTACCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCCGAGCAGGTTTCACTaGTTGGTCCTGGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDPSRFH*LVLEQV
Trigger: CACCTGCTCCAGGACCAATCAGTGAAACCTGCTCGG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTCCAATGACCTGCCTTaGGCCCGCGGTTGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTSNDLP*ARGCQE
Trigger: CTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGGCCTAAATACCGACTaGCCTCTGACCCCACCGTCC +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTGLNTD*PLTPPS
Trigger: GGACGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCACATGCCCATGACATaGGCTCAGTTGTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDHMPMT*AQLFSR
Trigger: CCTGCTGAACAACTGAGCTCATGTCATGGGCATGTG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTGGATTCCAATGACCTaGCTTGAGCCCGCGGTTGCC +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTWIPMT*LEPAVA
Trigger: GGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAAACCTAGGAAGGCCTaGTCCCTCTGGGTTACTGAC +
Preference number: 2 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDKPRKA*SLWVTD
Trigger: GTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGCGGTTGCCAGGAGTTaGACCTGCAGTAGTATGGGA +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTAVARS*TCSSMG
Trigger: TCCCATACTACTGCAGGTCCAACTCCTGGCAACCGC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCCCACCCCGTTAAGCTaGGTAGGACCAATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHPTPLS*VGPIRP
Trigger: AGGCCTGATTGGTCCTACCCAGCTTAACGGGGTGGG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACATACCGACTGCCCTCTaGCCCCACCGTCCAGCGATT +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYIPTAL*PHRPAI
Trigger: AATCGCTGGACGGTGGGGTCAGAGGGCAGTCGGTAT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGGCCTAAATACCGACTaGCCTCTGACCCCACCGTCC +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYGLNTD*PLTPPS
Trigger: GGACGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACATTTACTAAGTGAGTaGTTAACAGCTGACTGCCTA +
Preference number: 2 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAHLLSE*LTADCL
Trigger: TAGGCAGTCAGCTGTTAACCACTCACTTAGTAAATG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTTCACTGATTGGTCCTaGAGCAGGTGTAGTTATGAC +
Preference number: 2 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDFTDWS*SRCSYD
Trigger: GTCATAACTACACCTGCTCCAGGACCAATCAGTGAA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACCTAGTTCTAGATTCTaGAAGACCTGCATTTTAATG +
Preference number: 2 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAPSSRF*KTCILM
Trigger: CATTAAAATGCAGGTCTTTCAGAATCTAGAACTAGG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTTGAGCTGTTTAAAGTaGCTATCTCCCTACACAGAG +
Preference number: 2 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLSCLK*LSPYTE
Trigger: CTCTGTGTAGGGAGATAGTCACTTTAAACAGCTCAA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCCCACCCCGTTAAGCTaGGTAGGACCAATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYPTPLS*VGPIRP
Trigger: AGGCCTGATTGGTCCTACCCAGCTTAACGGGGTGGG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAGGGATTTTCATGATTaGGAAATACTGAGAGACAAG +
Preference number: 2 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLARDFHD*EILRDK
Trigger: CTTGTCTCTCAGTATTTCCCAATCATGAAAATCCCT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGTCCCTCTGGGTTACTaGCAGCGTCTACCCTCACGT +
Preference number: 2 (lower is better)
Translates to: QGTSELWEIILYRILRKHVPLGY*QRLPSR
Trigger: ACGTGAGGGTAGACGCTGTCAGTAACCCAGAGGGAC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGAAGCACATATGAAGTaGAAAACAGTATCAAAAGTG +
Preference number: 2 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAEAHMK*KTVSKV
Trigger: CACTTTTGATACTGTTTTGCACTTCATATGTGCTTC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTGCACGTATAAATCAATaGACTGAAAGCTCTCTATAC +
Preference number: 2 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPARINQ*TESSLY
Trigger: GTATAGAGAGCTTTCAGTTCATTGATTTATACGTGC...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGCCAGGAGTTGGACCTaGAGTAGTATGGGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYARSWT*SSMGSS
Trigger: TGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTATCCTACAACTACTGTaGCCAAAACGTGGATTCCAA +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTILQLL*PKRGFQ
Trigger: TTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGAT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACTTCACTGATTGGTCCTaGAGCAGGTGTAGTTATGAC +
Preference number: 2 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHFTDWS*SRCSYD
Trigger: GTCATAACTACACCTGCTCCAGGACCAATCAGTGAA...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCCTAGTTCTAGATTCTaGAAGACCTGCATTTTAATG +
Preference number: 2 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTPSSRF*KTCILM
Trigger: CATTAAAATGCAGGTCTTTCAGAATCTAGAACTAGG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGAAGCACATATGAAGTaGAAAACAGTATCAAAAGTG +
Preference number: 2 (lower is better)
Translates to: LSEWLTADCLENLGRPGPEAHMK*KTVSKV
Trigger: CACTTTTGATACTGTTTTGCACTTCATATGTGCTTC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCAAACAGAACATGTACTaGTTGTGTTTGAACCTTACT +
Preference number: 2 (lower is better)
Translates to: LSEWLTADCLENLGRPGPKQNMY*LCLNLT
Trigger: AGTAAGGTTCAAACACAAGCAGTACATGTTCTGTTT...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTGGTTAACAGCTGACTaGCTAGAAAACCTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYWLTAD*LENLGR
Trigger: CCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCATTTACTAAGTGAGTaGTTAACAGCTGACTGCCTA +
Preference number: 2 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHHLLSE*LTADCL
Trigger: TAGGCAGTCAGCTGTTAACCACTCACTTAGTAAATG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTTGAGCTGTTTAAAGTaGCTATCTCCCTACACAGAG +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYLSCLK*LSPYTE
Trigger: CTCTGTGTAGGGAGATAGTCACTTTAAACAGCTCAA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CAA 90 bp GGACCCACATGTTCTCAAGGCACTTCAGAACTTTGGGAAATCATTTaGTACCGGATCCTCAGAAAGCATTTATGGAAATACACATCCTTT +
Preference number: 2 (lower is better)
Translates to: GPTCSQGTSELWEII*YRILRKHLWKYTSF
Trigger: AAAGGATGTGTATTTCCATAAATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTGAGAACATGTGGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACACAAGGTATTATTGCTaGTCCTTTATCCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYTRYYC*SFIPSL
Trigger: AAGAGAAGGGATAAAGGACCAGCAATAATACCTTGT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTGCACGTATAAATCAATaGACTGAAAGCTCTCTATAC +
Preference number: 2 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFARINQ*TESSLY
Trigger: GTATAGAGAGCTTTCAGTTCATTGATTTATACGTGC...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATACAAGGTATTATTGCTaGTCCTTTATCCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: QGTSELWEIILYRILRKHTRYYC*SFIPSL
Trigger: AAGAGAAGGGATAAAGGACCAGCAATAATACCTTGT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTAAACAGAACATGTACTaGTTGTGTTTGAACCTTACT +
Preference number: 2 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFKQNMY*LCLNLT
Trigger: AGTAAGGTTCAAACACAAGCAGTACATGTTCTGTTT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGCCTTGAGCCCGCGGTaGCCAGGAGTTGGACCTGCA +
Preference number: 3 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAALSPR*PGVGPA
Trigger: TGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CCA 72 bp AGCCCGCGGTTGCCAGGAGTTGGACCTGCAGTAGTATaGGAAGCTCACGGCCTAAATACCGACTGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: SPRLPGVGPAVV*EAHGLNTDCPL
Trigger: CAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 72 bp ACCTGCCTTGAGCCCGCGGTTGCCAGGAGTTGGACCTaGAGTAGTATGGGAAGCTCACGGCCTAAATACCGA +
Preference number: 3 (lower is better)
Translates to: TCLEPAVARSWT*SSMGSSRPKYR
Trigger: TCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CCA 72 bp CCAATGACCTGCCTTGAGCCCGCGGTTGCCAGGAGTTaGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAA +
Preference number: 3 (lower is better)
Translates to: PMTCLEPAVARS*TCSSMGSSRPK
Trigger: TTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 72 bp GCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTaGCCTCTGACCCCACCGTCCAGCGATTCTAGAACA +
Preference number: 3 (lower is better)
Translates to: AVVWEAHGLNTD*PLTPPSSDSRT
Trigger: TGTTCTAGAATCGCTGGACGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR CCA 72 bp CAGAAAAGCAATCCTACAACTACTGTGGCCAAAACGTaGATTCCAATGACCTGCCTTGAGCCCGCGGTTGCC +
Preference number: 3 (lower is better)
Translates to: QKSNPTTTVAKT*IPMTCLEPAVA
Trigger: GGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGATTGCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACTTTGGGAAATCATTTaGTACCGGATCCTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLALWEII*YRILRK
Trigger: CTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGTCCATTTTACAGCCTaGGACAACAGAAGAGAACCA +
Preference number: 3 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDVHFTA*DNRREP
Trigger: TGGTTCTCTTCTGTTGTCCAAGGCTGTAAAATGGAC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTACTTACAAGGTATTATaGCTGGTCCTTTATCCCTTC +
Preference number: 3 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPTYKVL*LVLYPF
Trigger: GAAGGGATAAAGGACCAGCAATAATACCTTGTAAGT...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTAGACAAGCTGAAGATTaGTTAAGGGCTATGCTTCTG +
Preference number: 3 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTRQAED*LRAMLL
Trigger: CAGAAGCATAGCCCTTAACAAATCTTCAGCTTGTCT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCACTTACAAGGTATTATaGCTGGTCCTTTATCCCTTC +
Preference number: 3 (lower is better)
Translates to: LSEWLTADCLENLGRPGPTYKVL*LVLYPF
Trigger: GAAGGGATAAAGGACCAGCAATAATACCTTGTAAGT...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 72 bp CCGACAAGAGCTAAATCCGGTGTCAACAGGGTTCATTaGAGGAGTAGAATAATCCGGTACAAGGAACGAGAA +
Preference number: 3 (lower is better)
Translates to: PTRAKSGVNRVH*RSRIIRYKERE
Trigger: TTCTCGTTCCTTGTACCGGATTATTCTACTCCTGCAATGAACCCTGTTGACACCGGATTTAGCTCTTGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCTTTGGGAAATCATTTaGTACCGGATCCTCAGAAAG +
Preference number: 3 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYLWEII*YRILRK
Trigger: CTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR GCA 72 bp AGGAACGAGAACAGATTGAAACCAGAAACAAAGCCATaGCTGACAGTCAATCAAGGTCAATCTGATCATTTC +
Preference number: 3 (lower is better)
Translates to: RNENRLKPETKP*LTVNQGQSDHF
Trigger: GAAATGATCAGATTGACCTTGATTGACTGTCAGGCATGGCTTTGTTTCTGGTTTCAATCTGTTCTCGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATCAGAACATGTACTGCTaGTGTTTGAACCTTACTCTT +
Preference number: 3 (lower is better)
Translates to: QGTSELWEIILYRILRKHQNMYC*CLNLTL
Trigger: AAGAGTAAGGTTCAAACACAAGCAGTACATGTTCTG...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR-3UTR CAA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCAGAACATGTACTGCTaGTGTTTGAACCTTACTCTT +
Preference number: 3 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFQNMYC*CLNLTL
Trigger: AAGAGTAAGGTTCAAACACAAGCAGTACATGTTCTG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
3UTR TCA 72 bp CTAGTATTATGTAAGGTTATGCCTAGTTCTAGATTCTaGAAGACCTGCATTTTAATGCTTGCACAACCCATT +
Preference number: 3 (lower is better)
Translates to: LVLCKVMPSSRF*KTCILMLAQPI
Trigger: AATGGGTTGTGCAAGCATTAAAATGCAGGTCTTTCAGAATCTAGAACTAGGCATAACCTTACATAATACTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGGGCCCCCAGCTGCATaGCTCGCACCCCTCCCGACT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDGPPAA*LAPLPT
Trigger: AGTCGGGAGGGGTGCGAGGCATGCAGCTGGGGGCCC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAGCTGGGCCCCCAGCTaGATGCCTCGCACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDSWAPS*MPRTPP
Trigger: GGGAGGGGTGCGAGGCATGCAGCTGGGGGCCCAGCT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGGGGCCGCTACTGGCTaGAGCAGCCGCTCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPGAATG*SSRSGR
Trigger: ACGCCCGGAGCGGCTGCTGCAGCCAGTAGCGGCCCC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGTCCCGTGGCTGAGGTaGCGAGGTGGAAGATCAGCC +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAVPWLR*RGGRSA
Trigger: GGCTGATCTTCCACCTCGCCACCTCAGCCACGGGAC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACTAGCAGCTGCTTGGTaGGCAGCTCTTCCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLALAAAW*AALPAG
Trigger: TCCGGCTGGAAGAGCTGCTCACCAAGCAGCTGCTAG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAATACCGACTGCCCTCTaGCCCCACCGTCCAGCGATT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAIPTAL*PHRPAI
Trigger: AATCGCTGGACGGTGGGGTCAGAGGGCAGTCGGTAT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCAGCCCTTTACGGGGTaGGGCACCGGAGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTQPFTG*GTGAGP
Trigger: GGGCCCAGCTCCGGTGCCGCACCCCGTAAAGGGCTG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR CCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGTGCGGCACCGGAGCTaGGCCCCCAGCTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPVRHRS*APSCMP
Trigger: AGGCATGCAGCTGGGGGCCCAGCTCCGGTGCCGCAC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAACGTGGATTCCAATaGCCTGCCTTGAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAKRGFQ*PALSPR
Trigger: CCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTTGGCGTCCCGTGGCTaGGGTGGCGAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLASRG*GGEVED
Trigger: ATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACACACCCATCAGAAGTaGAATCAGGACCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAHTHQK*NQDPSG
Trigger: GCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCTAGCAGCTGCTTGGTaGGCAGCTCTTCCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLAAAW*AALPAG
Trigger: TCCGGCTGGAAGAGCTGCTCACCAAGCAGCTGCTAG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATTCTGTCTCCTGTGCTaGCCGCTTCCTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAFCLLC*PLPSLL
Trigger: CAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGGTCTTGGCGTCCCGTaGCTGAGGTGGCGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTGLGVP*LRWRGG
Trigger: TCCACCTCGCCACCTCAGCCACGGGACGCCAAGACC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACACATGCCCATGACATaGGCTCAGTTGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAHMPMT*AQLFSR
Trigger: CCTGCTGAACAACTGAGCTCATGTCATGGGCATGTG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGAGCGGGGCAGCCGGTaGAGGGGCCGCTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYERGSR*RGRYWL
Trigger: CAGCCAGTAGCGGCCCCTTCACCGGCTGCCCCGCTC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR GCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTCACACCCATCAGAAGTaGAATCAGGACCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPHTHQK*NQDPSG
Trigger: GCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTG...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACACTTCTCTTCTCCCTaGGGATCAACAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAHFSSP*GSTASR
Trigger: CCTGGATGCTGTTGATCCGCAGGGAGAAGAGAAGTG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTCACTGCTCTTCTCCTaGCTTCCCGGATGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDSLLFS*LPGCRG
Trigger: ACCCCTGCATCCGGGAAGCCAGGAGAAGAGCAGTGA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCCCACCCCGTTAAGCTaGGTAGGACCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDPTPLS*VGPIRP
Trigger: AGGCCTGATTGGTCCTACCCAGCTTAACGGGGTGGG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATGTACTCACACACGATaGCCACAGCTTGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLACTHTR*PQLGKR
Trigger: CCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGGACCTGCAGTAGTATaGGAAGCTCACGGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAGPAVV*EAHGLN
Trigger: ATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCACTGCACTGCAGCCTaGGCAACAGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDHCTAA*ATETPS
Trigger: AGATGGAGTCTCTGTTGCCCAGGCTGCAGTGCAGTG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGTCCCTCTGGGTTACTaGCAGCGTCTACCCTCACGT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTVPLGY*QRLPSR
Trigger: ACGTGAGGGTAGACGCTGTCAGTAACCCAGAGGGAC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCCGAGCAGGTTTCACTaGTTGGTCCTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTPSRFH*LVLEQV
Trigger: CACCTGCTCCAGGACCAATCAGTGAAACCTGCTCGG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAGCGGCAGGGAAGGCTaGTTTTTCATGCAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDSGREG*FFMQSS
Trigger: CGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGGCAACGGAAGGATGTaGATCCTCGGAAAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTGNGRM*ILGKRQ
Trigger: CTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCTGGATTCCAATGACCTaGCTTGAGCCCGCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPWIPMT*LEPAVA
Trigger: GGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCA...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCCCACCCCGTTAAGCTaGGTAGGACCAATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTPTPLS*VGPIRP
Trigger: AGGCCTGATTGGTCCTACCCAGCTTAACGGGGTGGG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAACTGTGGCCAAAACGTaGATTCCAATGACCTGCCTT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLATVAKT*IPMTCL
Trigger: AAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGTAATTCTTGTCATCTaGCAGACCACTGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAVILVI*QTTEAD
Trigger: ATCGGCTTCAGTGGTCTGTCAGATGACAAGAATTAC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACACCACCACATGCCCATaGCATGAGCTCAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDTTTCP*HELSCS
Trigger: TGAACAACTGAGCTCATGTCATGGGCATGTGGTGGT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTACCACCACATGCCCATaGCATGAGCTCAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPTTTCP*HELSCS
Trigger: TGAACAACTGAGCTCATGTCATGGGCATGTGGTGGT...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATACTTCATTATAGGCTaGCTGGCTTTCCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAYFIIG*LAFLCG
Trigger: TCCACACAGGAAAGCCAGTCAGCCTATAATGAAGTA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTACGTTCTGTCTCCTGTaGTGCCCGCTTCCTAGCTTG +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTTFCLL*CPLPSL
Trigger: CAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACGT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCCGGTGTGGGTGGTTTaGATTCTGCTCCAACTCTTT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDPVWVV*ILLQLF
Trigger: AAAGAGTTGGAGCAGAATGCAAACCACCCACACCGG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGCTTTATGGGATGGGTaGTCCTCACAAGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDALWDG*SSQANS
Trigger: GCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGGCCTAAATACCGACTaGCCTCTGACCCCACCGTCC +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHGLNTD*PLTPPS
Trigger: GGACGGTGGGGTCAGAGGGCAGTCGGTATTTAGGCC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTGTACTCACACACGATaGCCACAGCTTGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPCTHTR*PQLGKR
Trigger: CCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTGACGGCTTTATGGGATaGGTGCTCCTCACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPDGFMG*VLLTSK
Trigger: TTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTC...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGACGGCTTTATGGGATaGGTGCTCCTCACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDDGFMG*VLLTSK
Trigger: TTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATCACAGCTTGTTTCCTaGCAGCCTTACACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLASQLVS*QPYTSL
Trigger: AAGAGAAGTGTAAGGCTGCCAGGAAACAAGCTGTGA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTCTGCTCCAACTCTTTaGGAAGACGTTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDSAPTL*EDVLSP
Trigger: AGGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCCCTCCGATAATTTCTaGTTTCTGTCCGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPPSDNF*FLSGRT
Trigger: TGTGCGGCCGGACAGAAATCAGAAATTATCGGAGGG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACAAACGTGGATTCCAATaGCCTGCCTTGAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHKRGFQ*PALSPR
Trigger: CCGCGGGCTCAAGGCAGGTCATTGGAATCCACGTTT...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGGCAACGGAAGGATGTaGATCCTCGGAAAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHGNGRM*ILGKRQ
Trigger: CTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACTGGATTCCAATGACCTaGCTTGAGCCCGCGGTTGCC +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHWIPMT*LEPAVA
Trigger: GGCAACCGCGGGCTCAAGGCAGGTCATTGGAATCCA...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTCTCTCACGAGGGACTaGGCTTCCTCAAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPSLTRD*ASSKMF
Trigger: GAACATTTTTGAGGAAGCCCAGTCCCTCGTGAGAGA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACAAACTCTTCCTGGGCTaGGCGCCGTGGCTCACACCC +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYKLFLG*APWLTP
Trigger: GGGTGTGAGCCACGGCGCCCAGCCCAGGAAGAGTTT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTACGATGCCCACAGCTTaGCAAAAGGTACACAAACAC +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPTMPTA*QKVHKH
Trigger: GTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGT...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAAAAGAAGTCTGAATTaGATGCGGTCTTGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDKRSLN*MRSWRP
Trigger: GGGACGCCAAGACCGCATCCAATTCAGACTTCTTTT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTCAGGTCGAGATAGCTaGGAATATTCTGCGCAAGCC +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTSGRDS*EYSAQA
Trigger: GGCTTGCGCAGAATATTCTCAGCTATCTCGACCTGA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTCCAATGACCTGCCTTaGGCCCGCGGTTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFSNDLP*ARGCQE
Trigger: CTCCTGGCAACCGCGGGCTCAAGGCAGGTCATTGGA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGCACCAAAAGAAGTCTaGATTGGATGCGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTAPKEV*IGCGLG
Trigger: GCCAAGACCGCATCCAATTCAGACTTCTTTTGGTGC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR GCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTGGGTGGTTTGCATTCTaGTCCAACTCTTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPGWFAF*SNSLRR
Trigger: TCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCC...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCTCTGGGGAAGAATATaGCTGAAGCGTAACCATGAT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLWGRI*LKRNHD
Trigger: ATCATGGTTACGCTTCAGGCATATTCTTCCCCAGAG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCCAGAAACAAAGCCATaGCTGACAGTCAATCAAGGT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDPETKP*LTVNQG
Trigger: ACCTTGATTGACTGTCAGGCATGGCTTTGTTTCTGG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTGTCAACAGGGTTCATTaGAGGAGTAGAATAATCCGG +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPVNRVH*RSRIIR
Trigger: CCGGATTATTCTACTCCTGCAATGAACCCTGTTGAC...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAAACCCAAAACCTTaGATGCACAAGCTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAKNPKP*MHKLSS
Trigger: TGAGCTTAGCTTGTGCATGCAAGGTTTTGGGTTTTT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTCAATCCGGTGTGGGTaGTTTGCATTCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTSIRCG*FAFCSN
Trigger: GTTGGAGCAGAATGCAAACCACCCACACCGGATTGA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCTCAATCCGGTGTGGGTaGTTTGCATTCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPSIRCG*FAFCSN
Trigger: GTTGGAGCAGAATGCAAACCACCCACACCGGATTGA...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTTCCAGACGGCTTTATaGGATGGGTGCTCCTCACAA +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTFQTAL*DGCSSQ
Trigger: TTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGCGGTTGCCAGGAGTTaGACCTGCAGTAGTATGGGA +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHAVARS*TCSSMG
Trigger: TCCCATACTACTGCAGGTCCAACTCCTGGCAACCGC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTAAACTCTTCCTGGGCTaGGCGCCGTGGCTCACACCC +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFKLFLG*APWLTP
Trigger: GGGTGTGAGCCACGGCGCCCAGCCCAGGAAGAGTTT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGTTCCCAGCCATTTTTaGCATGAACATGGACTACAG +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDVPSHF*HEHGLQ
Trigger: CTGTAGTCCATGTTCATGCCAAAAATGGCTGGGAAC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGGGGAAGAATATGCCTaGAGCGTAACCATGATTTCC +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPGEEYA*SVTMIS
Trigger: GGAAATCATGGTTACGCTTCAGGCATATTCTTCCCC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAAACAAAGCCATGCCTaGCAGTCAATCAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDKQSHA*QSIKVN
Trigger: ATTGACCTTGATTGACTGTCAGGCATGGCTTTGTTT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAGGCTGCTTTTTCATaGAGTCTTCGATTATCTCTT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAKAAFS*SLRLSL
Trigger: AAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCTGTCTCAGGTCAAATaGTTTAGTTGTGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLSQVK*FSCVCF
Trigger: GAAGCAGACACAACTAAAGCATTTGACCTGAGACAG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCACTTCTCTTCTCCCTaGGGATCAACAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHHFSSP*GSTASR
Trigger: CCTGGATGCTGTTGATCCGCAGGGAGAAGAGAAGTG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGCCTCCATTATAAAATaGCACAATTTTCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAASIIK*HNFLSH
Trigger: GTGAGAGAGAAAATTGTGCCATTTTATAATGGAGGC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACGCACCGCACAGATTTTaGTTAAAGTGTGATACCTTG +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDAPHRF*LKCDTL
Trigger: CAAGGTATCACACTTTAACCAAAATCTGTGCGGTGC...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTCACTGCTCTTCTCCTaGCTTCCCGGATGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYSLLFS*LPGCRG
Trigger: ACCCCTGCATCCGGGAAGCCAGGAGAAGAGCAGTGA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTGAAAGAACTTCTCCCTaGATCTCAGACAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPERTSP*ISDKFP
Trigger: TGGAAACTTGTCTGAGATCCAGGGAGAAGTTCTTTC...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAACAAGGTATTATTGCTaGTCCTTTATCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLATRYYC*SFIPSL
Trigger: AAGAGAAGGGATAAAGGACCAGCAATAATACCTTGT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCACTGTGGCCAAAACGTaGATTCCAATGACCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPTVAKT*IPMTCL
Trigger: AAGGCAGGTCATTGGAATCCACGTTTTGGCCACAGT...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACATCCTACAACTACTGTaGCCAAAACGTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDILQLL*PKRGFQ
Trigger: TTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGAT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACAATTGGATGCGGTCTTaGCGTCCCGTGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYNWMRS*RPVAEV
Trigger: CACCTCAGCCACGGGACGCCAAGACCGCATCCAATT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR TCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTCCTTTTGGATTTCCTaGAGCCTACTAATAGAAGGA +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDSFWIS*SLLIEG
Trigger: TCCTTCTATTAGTAGGCTTCAGGAAATCCAAAAGGA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGTAATTCTTGTCATCTaGCAGACCACTGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTVILVI*QTTEAD
Trigger: ATCGGCTTCAGTGGTCTGTCAGATGACAAGAATTAC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGTGTCAGCCTCAGAATaGTATCTTGGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPVSASE*YLGCLL
Trigger: AAGAAGGCATCCAAGATATCATTCTGAGGCTGACAC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCACACATCACGAAGTTaGTTTTGGCAACGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTHTSRS*FWQRKD
Trigger: ATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTCAAGTCAATATATGTaGTCAGAGTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPSSQYM*SEFAPR
Trigger: TCGAGGTGCAAACTCTGATCACATATATTGACTTGA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCAGCCATTTTTGGCATaGACATGGACTACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTQPFLA*TWTTAF
Trigger: AAACGCTGTAGTCCATGTTCATGCCAAAAATGGCTG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCACAGGATAAGTGCCTaGAGGTCTCATTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTHRISA*RSHCCS
Trigger: TGAACAACAATGAGACCTGCAGGCACTTATCCTGTG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCACAGGATAAGTGCCTaGAGGTCTCATTGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPHRISA*RSHCCS
Trigger: TGAACAACAATGAGACCTGCAGGCACTTATCCTGTG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTGTCCAATTAAACCCTaGAATTCTGTTTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDCPIKP*NSVLEL
Trigger: GAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGCTTTATGGGATGGGTaGTCCTCACAAGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHALWDG*SSQANS
Trigger: GCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTGGTTAACAGCTGACTaGCTAGAAAACCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTWLTAD*LENLGR
Trigger: CCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCTGGTTAACAGCTGACTaGCTAGAAAACCTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPWLTAD*LENLGR
Trigger: CCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCA...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTATTTCAATCCGGTGTaGGTGGTTTGCATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTYFNPV*VVCILL
Trigger: GAGCAGAATGCAAACCACCCACACCGGATTGAAATA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCTCACAGCTTGTTTCCTaGCAGCCTTACACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPSQLVS*QPYTSL
Trigger: AAGAGAAGTGTAAGGCTGCCAGGAAACAAGCTGTGA...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGCTGAGGTGGCGAGGTaGAAGATCAGCCCTTTACGG +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHAEVAR*KISPLR
Trigger: CCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
3UTR CAA 72 bp CCGGGGAGGTGTGACAAGGCTGTCCATTTTACAGCCTaGGACAACAGAAGAGAACCATTATGTGCTACATTC +
Preference number: 4 (lower is better)
Translates to: PGRCDKAVHFTA*DNRREPLCATF
Trigger: GAATGTAGCACATAATGGTTCTCTTCTGTTGTCCAAGGCTGTAAAATGGACAGCCTTGTCACACCTCCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTAAACAAAGCCATGCCTaGCAGTCAATCAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTKQSHA*QSIKVN
Trigger: ATTGACCTTGATTGACTGTCAGGCATGGCTTTGTTT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTTCTGTCTCCTGTGCTaGCCGCTTCCTAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFFCLLC*PLPSLL
Trigger: CAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAAGGCTGCTTTTTCATaGAGTCTTCGATTATCTCTT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDKAAFS*SLRLSL
Trigger: AAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACAGCACACAGGATAAGTaGCTGCAGGTCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHSTQDK*LQVSLL
Trigger: CAACAATGAGACCTGCAGGCACTTATCCTGTGTGCT...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTTGCACCTCGATCACTaGTCTTCTCCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHLHLDH*SSPGFP
Trigger: CGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTTGCACCTCGATCACTaGTCTTCTCCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFLHLDH*SSPGFP
Trigger: CGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCTATGTGATCAGAGTTTaGACCTCGATCACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPYVIRV*TSITAL
Trigger: AAGAGCAGTGATCGAGGTGCAAACTCTGATCACATA...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTGAAAGAACTTCTCCCTaGATCTCAGACAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTERTSP*ISDKFP
Trigger: TGGAAACTTGTCTGAGATCCAGGGAGAAGTTCTTTC...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACACAAGGTATTATTGCTaGTCCTTTATCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDTRYYC*SFIPSL
Trigger: AAGAGAAGGGATAAAGGACCAGCAATAATACCTTGT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATAAGGCCTGGTCCCTCTaGGTTACTGACAGCGTCTAC +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHKAWSL*VTDSVY
Trigger: GTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTAAGGCCTGGTCCCTCTaGGTTACTGACAGCGTCTAC +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFKAWSL*VTDSVY
Trigger: GTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTAGGGATTTTCATGATTaGGAAATACTGAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPRDFHD*EILRDK
Trigger: CTTGTCTCTCAGTATTTCCCAATCATGAAAATCCCT...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATCACTGCACTGCAGCCTaGGCAACAGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHHCTAA*ATETPS
Trigger: AGATGGAGTCTCTGTTGCCCAGGCTGCAGTGCAGTG...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCATTTTGGTTAAAGTGTaGTACCTTGCTTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPILVKV*YLAFRK
Trigger: CTTGCGGAAAGCAAGGTATCACACTTTAACCAAAAT...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATCCCTCCGATAATTTCTaGTTTCTGTCCGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHPSDNF*FLSGRT
Trigger: TGTGCGGCCGGACAGAAATCAGAAATTATCGGAGGG...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCACATGCCCATGACATaGGCTCAGTTGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFHMPMT*AQLFSR
Trigger: CCTGCTGAACAACTGAGCTCATGTCATGGGCATGTG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCAGCCATTTTTGGCATaGACATGGACTACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHQPFLA*TWTTAF
Trigger: AAACGCTGTAGTCCATGTTCATGCCAAAAATGGCTG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGGGTGGTTTGCATTCTaGTCCAACTCTTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHGWFAF*SNSLRR
Trigger: TCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCCGGTGTGGGTGGTTTaGATTCTGCTCCAACTCTTT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYPVWVV*ILLQLF
Trigger: AAAGAGTTGGAGCAGAATGCAAACCACCCACACCGG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTCTTCGATTATCTCTTaGACCGCACAGATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTSSIIS*TAQILV
Trigger: AACCAAAATCTGTGCGGTGCAAGAGATAATCGAAGA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTAGCGGCAGGGAAGGCTaGTTTTTCATGCAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFSGREG*FFMQSS
Trigger: CGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACTTCAGAAGGGTTTTGTaGTTGGAGAAGTTCATTTTT +
Preference number: 4 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDFRRVL*LEKFIF
Trigger: AAAAATGAACTTCTCCAAGCACAAAACCCTTCTGAA...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTAAACAGAACATGTACTaGTTGTGTTTGAACCTTACT +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPKQNMY*LCLNLT
Trigger: AGTAAGGTTCAAACACAAGCAGTACATGTTCTGTTT...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTGCCAGGAGTTGGACCTaGAGTAGTATGGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFARSWT*SSMGSS
Trigger: TGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGC...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGCCAGGAGTTGGACCTaGAGTAGTATGGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHARSWT*SSMGSS
Trigger: TGAGCTTCCCATACTACTGCAGGTCCAACTCCTGGC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCTCTGGGGAAGAATATaGCTGAAGCGTAACCATGAT +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHLWGRI*LKRNHD
Trigger: ATCATGGTTACGCTTCAGGCATATTCTTCCCCAGAG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTCTAATAGAAGGATGTTaGTTTCCCATATCCATACTT +
Preference number: 4 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPLIEGC*FPISIL
Trigger: AAGTATGGATATGGGAAACCAACATCCTTCTATTAG...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTTCCAGACGGCTTTATaGGATGGGTGCTCCTCACAA +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYFQTAL*DGCSSQ
Trigger: TTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTCAGGTCGAGATAGCTaGGAATATTCTGCGCAAGCC +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHSGRDS*EYSAQA
Trigger: GGCTTGCGCAGAATATTCTCAGCTATCTCGACCTGA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCTGAAGCCGATAACTTaGTGTTCTACACTTTTTACT +
Preference number: 4 (lower is better)
Translates to: LSEWLTADCLENLGRPGPLKPIT*CSTLFT
Trigger: AGTAAAAAGTGTAGAACAGCAAGTTATCGGCTTCAG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACCTGTCTCAGGTCAAATaGTTTAGTTGTGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHLSQVK*FSCVCF
Trigger: GAAGCAGACACAACTAAAGCATTTGACCTGAGACAG...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTCTCTCACGAGGGACTaGGCTTCCTCAAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYSLTRD*ASSKMF
Trigger: GAACATTTTTGAGGAAGCCCAGTCCCTCGTGAGAGA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTAGGGATTTTCATGATTaGGAAATACTGAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTRDFHD*EILRDK
Trigger: CTTGTCTCTCAGTATTTCCCAATCATGAAAATCCCT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACATCCTACAACTACTGTaGCCAAAACGTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHILQLL*PKRGFQ
Trigger: TTGGAATCCACGTTTTGGCCACAGTAGTTGTAGGAT...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCGCTTCCTAGCTTGCTaGATATCTCCTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYRFLAC*ISPFPS
Trigger: TGAAGGAAAAGGAGATATTCAGCAAGCTAGGAAGCG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGTGTCAGCCTCAGAATaGTATCTTGGATGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYVSASE*YLGCLL
Trigger: AAGAAGGCATCCAAGATATCATTCTGAGGCTGACAC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTGGGGAAGAATATGCCTaGAGCGTAACCATGATTTCC +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFGEEYA*SVTMIS
Trigger: GGAAATCATGGTTACGCTTCAGGCATATTCTTCCCC...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGACCAATTACCCATGTaGACAATTCAAAATGACGGT +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHDQLPM*TIQNDG
Trigger: ACCGTCATTTTGAATTGTTCACATGGGTAATTGGTC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACTCTTCGATTATCTCTTaGACCGCACAGATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHSSIIS*TAQILV
Trigger: AACCAAAATCTGTGCGGTGCAAGAGATAATCGAAGA...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTAGCACACAGGATAAGTaGCTGCAGGTCTCATTGTTG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFSTQDK*LQVSLL
Trigger: CAACAATGAGACCTGCAGGCACTTATCCTGTGTGCT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCCAGAAACAAAGCCATaGCTGACAGTCAATCAAGGT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYPETKP*LTVNQG
Trigger: ACCTTGATTGACTGTCAGGCATGGCTTTGTTTCTGG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTTCACTGATTGGTCCTaGAGCAGGTGTAGTTATGAC +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYFTDWS*SRCSYD
Trigger: GTCATAACTACACCTGCTCCAGGACCAATCAGTGAA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGTTCCCAGCCATTTTTaGCATGAACATGGACTACAG +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYVPSHF*HEHGLQ
Trigger: CTGTAGTCCATGTTCATGCCAAAAATGGCTGGGAAC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACACTGGCTTTCCTGTGTaGATAAAGTGTGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHTGFPV*IKCDLK
Trigger: TTTCAGATCACACTTTATCCACACAGGAAAGCCAGT...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATCACACATCACGAAGTTaGTTTTGGCAACGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHHTSRS*FWQRKD
Trigger: ATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTG...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GATGCTTCACGCACGACTGACTTTAATGGCTCTTTCAGGCAACAGAGAAACCACGCACGTATAAATCAATaGACTGAAAGCTCTCTATAC +
Preference number: 4 (lower is better)
Translates to: DASRTTDFNGSFRQQRNHARINQ*TESSLY
Trigger: GTATAGAGAGCTTTCAGTTCATTGATTTATACGTGC...GTGGTTTCTCTGTTGCCTGAAAGAGCCATTAAAGTCAGTCGTGCGTGAAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTGTGTGGATAAAGTGTaGTCTGAAAGCAACGCTGAC +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHCVDKV*SESNAD
Trigger: GTCAGCGTTGCTTTCAGATCACACTTTATCCACACA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTACTTCATTATAGGCTaGCTGGCTTTCCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHYFIIG*LAFLCG
Trigger: TCCACACAGGAAAGCCAGTCAGCCTATAATGAAGTA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTTCACTGATTGGTCCTaGAGCAGGTGTAGTTATGAC +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHFTDWS*SRCSYD
Trigger: GTCATAACTACACCTGCTCCAGGACCAATCAGTGAA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTCGATTTCCATCAAATaGAAGAACTTCTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYSISIK*KNFSLD
Trigger: ATCCAGGGAGAAGTTCTTTCATTTGATGGAAATCGA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTTGAGCTGTTTAAAGTaGCTATCTCCCTACACAGAG +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHLSCLK*LSPYTE
Trigger: CTCTGTGTAGGGAGATAGTCACTTTAAACAGCTCAA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTGCTTTAGTTGTGTCTaGTTCCTCTTCCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFCFSCV*FLFQIQ
Trigger: CTGGATTTGGAAGAGGAAGCAGACACAACTAAAGCA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTGCTTTAGTTGTGTCTaGTTCCTCTTCCAAATCCAG +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHCFSCV*FLFQIQ
Trigger: CTGGATTTGGAAGAGGAAGCAGACACAACTAAAGCA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACAAAAACCCAAAACCTTaGATGCACAAGCTAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYKNPKP*MHKLSS
Trigger: TGAGCTTAGCTTGTGCATGCAAGGTTTTGGGTTTTT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCCTGCAATTCTGTTTTaGAGCTCAGGTACAATTCAG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFPAILF*SSGTIQ
Trigger: CTGAATTGTACCTGAGCTCCAAAACAGAATTGCAGG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTATTTTGGTTAAAGTGTaGTACCTTGCTTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFILVKV*YLAFRK
Trigger: CTTGCGGAAAGCAAGGTATCACACTTTAACCAAAAT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTCAAGTCAATATATGTaGTCAGAGTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFSSQYM*SEFAPR
Trigger: TCGAGGTGCAAACTCTGATCACATATATTGACTTGA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTCGATTTCCATCAAATaGAAGAACTTCTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHSISIK*KNFSLD
Trigger: ATCCAGGGAGAAGTTCTTTCATTTGATGGAAATCGA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGACCAATTACCCATGTaGACAATTCAAAATGACGGT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHDQLPM*TIQNDG
Trigger: ACCGTCATTTTGAATTGTTCACATGGGTAATTGGTC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTGTCCAATTAAACCCTaGAATTCTGTTTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFCPIKP*NSVLEL
Trigger: GAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCTCAGAATGATATCTTaGATGCCTTCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYLRMIS*MPSSNS
Trigger: TGAGTTTGAAGAAGGCATCCAAGATATCATTCTGAG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATACTGGCTTTCCTGTGTaGATAAAGTGTGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHTGFPV*IKCDLK
Trigger: TTTCAGATCACACTTTATCCACACAGGAAAGCCAGT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGCACGTATAAATCAATaGACTGAAAGCTCTCTATAC +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHARINQ*TESSLY
Trigger: GTATAGAGAGCTTTCAGTTCATTGATTTATACGTGC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR TCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCCTAGTTCTAGATTCTaGAAGACCTGCATTTTAATG +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFPSSRF*KTCILM
Trigger: CATTAAAATGCAGGTCTTTCAGAATCTAGAACTAGG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATCTGAAGCCGATAACTTaGTGTTCTACACTTTTTACT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHLKPIT*CSTLFT
Trigger: AGTAAAAAGTGTAGAACAGCAAGTTATCGGCTTCAG...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGAAGCACATATGAAGTaGAAAACAGTATCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYEAHMK*KTVSKV
Trigger: CACTTTTGATACTGTTTTGCACTTCATATGTGCTTC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACAAACAGAACATGTACTaGTTGTGTTTGAACCTTACT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYKQNMY*LCLNLT
Trigger: AGTAAGGTTCAAACACAAGCAGTACATGTTCTGTTT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCTAATAGAAGGATGTTaGTTTCCCATATCCATACTT +
Preference number: 4 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYLIEGC*FPISIL
Trigger: AAGTATGGATATGGGAAACCAACATCCTTCTATTAG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTGCCTCCATTATAAAATaGCACAATTTTCTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFASIIK*HNFLSH
Trigger: GTGAGAGAGAAAATTGTGCCATTTTATAATGGAGGC...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CCA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCTCAGAATGATATCTTaGATGCCTTCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFLRMIS*MPSSNS
Trigger: TGAGTTTGAAGAAGGCATCCAAGATATCATTCTGAG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR GCA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTTCAGAAGGGTTTTGTaGTTGGAGAAGTTCATTTTT +
Preference number: 4 (lower is better)
Translates to: QGTSELWEIILYRILRKHFRRVL*LEKFIF
Trigger: AAAAATGAACTTCTCCAAGCACAAAACCCTTCTGAA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS CCA 90 bp CTGAATTGGATGCGGTCTTGGCGTCCCGTGGCTGAGGTGGCGAGGTaGAAGATCAGCCCTTTACGGGGTGCGGCACCGGAGCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LNWMRSWRPVAEVAR*KISPLRGAAPELGP
Trigger: GGGGCCCAGCTCCGGTGCCGCACCCCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp GTGGGTAACCAATGGAAACGCATAATCTATCCCCGGCGGATGTCCTaGAGGCCACGGAGGGAAGGCGGCCCGAGCTGCTTCCTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: VGNQWKRIIYPRRMS*RPRREGGPSCFLPA
Trigger: GGCGGGGAGGAAGCAGCTCGGGCCGCCTTCCCTCCGTGGCCTCCAGGACATCCGCCGGGGATAGATTATGCGTTTCCATTGGTTACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS TCA 90 bp ACCCAAAAGAAGTCTGAATTGGATGCGGTCTTGGCGTCCCGTGGCTaGGGTGGCGAGGTGGAAGATCAGCCCTTTACGGGGTGCGGCACC +
Preference number: 5 (lower is better)
Translates to: TQKKSELDAVLASRG*GGEVEDQPFTGCGT
Trigger: GGTGCCGCACCCCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS TCA 90 bp CACCAAAAGAAGTCTGAATTGGATGCGGTCTTGGCGTCCCGTGGCTaGGGTGGCGAGGTGGAAGATCAGCCCTTTACGGGGTGCGGCACC +
Preference number: 5 (lower is better)
Translates to: HQKKSELDAVLASRG*GGEVEDQPFTGCGT
Trigger: GGTGCCGCACCCCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS CCA 90 bp GCCTCGCCCTTCCCTCTTGGCCCTTTACCCAAAAGAAGTCTGAATTaGATGCGGTCTTGGCGTCCCGTGGCTGAGGTGGCGAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: ASPFPLGPLPKRSLN*MRSWRPVAEVARWK
Trigger: CTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGTAAAGGGCCAAGAGGGAAGGGCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS-3UTR CAA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAGGGCTAGCAGCTGCTaGGTGAGCAGCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDRASSC*VSSSSS
Trigger: GCTGGAAGAGCTGCTCACCAAGCAGCTGCTAGCCCT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS TCA 90 bp CAATCAGGACCCCTCGGGCCTTGTTCACCTCACACATCACGAAGTTaGTTTTGGCAACGGAAGGATGTGCATCCTCGGAAAGCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QSGPLGPCSPHTSRS*FWQRKDVHPRKAAG
Trigger: CCCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp CCTCTTGGCCCTTTACCCAAAAGAAGTCTGAATTGGATGCGGTCTTaGCGTCCCGTGGCTGAGGTGGCGAGGTGGAAGATCAGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: PLGPLPKRSLNWMRS*RPVAEVARWKISPL
Trigger: TAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGTAAAGGGCCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTAGGACCCCTCGGGCCTaGTTCACCTCACACATCACG +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTRTPRA*FTSHIT
Trigger: CGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTAGGGCTAGCAGCTGCTaGGTGAGCAGCTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTRASSC*VSSSSS
Trigger: GCTGGAAGAGCTGCTCACCAAGCAGCTGCTAGCCCT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACAAAAGAAGTCTGAATaGGATGCGGTCTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAQKKSE*DAVLAS
Trigger: GGACGCCAAGACCGCATCCAATTCAGACTTCTTTTG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS TCA 90 bp CTTCTCCCTGCGGATCAACAGCATCCAGGGCTAGCAGCTGCTTGGTaGGCAGCTCTTCCAGCCGGATGTAGTTCTTATCGGTTCGATTTC +
Preference number: 5 (lower is better)
Translates to: LLPADQQHPGLAAAW*AALPAGCSSYRFDF
Trigger: GAAATCGAACCGATAAGAACTACATCCGGCTGGAAGAGCTGCTCACCAAGCAGCTGCTAGCCCTGGATGCTGTTGATCCGCAGGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp AGCTCTTGGTTTCTATCAAACGGCTCGCTCAAGGTGGGTAACCAATaGAAACGCATAATCTATCCCCGGCGGATGTCCTGGAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: SSWFLSNGSLKVGNQ*KRIIYPRRMSWRPR
Trigger: CCGTGGCCTCCAGGACATCCGCCGGGGATAGATTATGCGTTTCCATTGGTTACCCACCTTGAGCGAGCCGTTTGATAGAAACCAAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATTCTGCTCCAACTCTTaGAGAAGACGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAFCSNS*RRRSVS
Trigger: GGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTCCGGTGTGGGTGGTTaGCATTCTGCTCCAACTCTT +
Preference number: 5 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPSGVGG*HSAPTL
Trigger: AAGAGTTGGAGCAGAATGCAAACCACCCACACCGGA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACTGCAGGTCTCATTGTaGTTCACACCCATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLALQVSL*FTPIRS
Trigger: ACTTCTGATGGGTGTGAACAACAATGAGACCTGCAG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS GCA 90 bp CATCCAGGTCAGCGATCAGCCCCGAGAGCACACAGGATAAGTGCCTaGAGGTCTCATTGTTGTTCACACCCATCAGAAGTGCAATCAGGA +
Preference number: 5 (lower is better)
Translates to: HPGQRSAPRAHRISA*RSHCCSHPSEVQSG
Trigger: TCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGATCGCTGACCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 90 bp AGAGCATCCAGGTCAGCGATCAGCCCCGAGAGCACACAGGATAAGTaGCTGCAGGTCTCATTGTTGTTCACACCCATCAGAAGTGCAATC +
Preference number: 5 (lower is better)
Translates to: RASRSAISPESTQDK*LQVSLLFTPIRSAI
Trigger: GATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGATCGCTGACCTGGATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTGCCTGCAGGTCTCATaGTTGTTCACACCCATCAGA +
Preference number: 5 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPCLQVS*LFTPIR
Trigger: TCTGATGGGTGTGAACAACAATGAGACCTGCAGGCA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCACCCTGCAATTCTGTTTaGGAGCTCAGGTACAATTCA +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAPCNSV*ELRYNS
Trigger: TGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGG...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAGTCCATTTTACAGCCTaGGACAACAGAAGAGAACCA +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLAVHFTA*DNRREP
Trigger: TGGTTCTCTTCTGTTGTCCAAGGCTGTAAAATGGAC...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGCCTTGAGCCCGCGGTaGCCAGGAGTTGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYALSPR*PGVGPA
Trigger: TGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS CCA 90 bp TTCAGTTTCACAAGCACCAAAAGAAGTCTGAATTGGATGCGGTCTTaGCGTCCCGTGGCTGAGGTGGCGAGGTGGAAGATCAGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: FSFTSTKRSLNWMRS*RPVAEVARWKISPL
Trigger: TAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGTGCTTGTGAAACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAGACAAGCTGAAGATTaGTTAAGGGCTATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLARQAED*LRAMLL
Trigger: CAGAAGCATAGCCCTTAACAAATCTTCAGCTTGTCT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATGCCTTGAGCCCGCGGTaGCCAGGAGTTGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHALSPR*PGVGPA
Trigger: TGCAGGTCCAACTCCTGGCAACCGCGGGCTCAAGGC...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS GCA 90 bp TTGGCAACGGAAGGATGTGCATCCTCGGAAAGCGGCAGGGAAGGCTaGTTTTTCATGCAGTCTTCGATTATCTCTTGCACCGCACAGATT +
Preference number: 5 (lower is better)
Translates to: LATEGCASSESGREG*FFMQSSIISCTAQI
Trigger: AATCTGTGCGGTGCAAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 90 bp GTTCACCTCACACATCACGAAGTTGATTTTGGCAACGGAAGGATGTaGATCCTCGGAAAGCGGCAGGGAAGGCTGCTTTTTCATGCAGTC +
Preference number: 5 (lower is better)
Translates to: VHLTHHEVDFGNGRM*ILGKRQGRLLFHAV
Trigger: GACTGCATGAAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 90 bp CTTTTCTCAAGGGCCTCCTTCAAGTCAATATATGTGATCAGAGTTTaGACCTCGATCACTGCTCTTCTCCTGGCTTCCCGGATGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LFSRASFKSIYVIRV*TSITALLLASRMQG
Trigger: CCCCTGCATCCGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCTTGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCAACTGAAGCCGATAACTaGCTGTTCTACACTTTTTAC +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLATEADN*LFYTFY
Trigger: GTAAAAAGTGTAGAACAGCAAGTTATCGGCTTCAGT...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GACGGTGGAAGAGCTGAGCACCCTGTACTCACACACGATGCCCACAGCTTGGCATTAAAGTGTGATACCTaGCTTTCCGCAAGGAGATTT +
Preference number: 5 (lower is better)
Translates to: DGGRAEHPVLTHDAHSLALKCDT*LSARRF
Trigger: AAATCTCCTTGCGGAAAGCAAGGTATCACACTTTAA...TGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGCTCAGCTCTTCCACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTGCCTGCAGGTCTCATaGTTGTTCACACCCATCAGA +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTCLQVS*LFTPIR
Trigger: TCTGATGGGTGTGAACAACAATGAGACCTGCAGGCA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCACGATGCCCACAGCTaGGCAAAAGGTACACAAACA +
Preference number: 5 (lower is better)
Translates to: LSEWLTADCLENLGRPGPHDAHS*AKGTQT
Trigger: TGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS GCA 90 bp TCAGACAAGTTTCCAAGGACGTTCCAGACGGCTTTATGGGATGGGTaGTCCTCACAAGCAAACAGCTTTCTTTTCTCAAGGGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SDKFPRTFQTALWDG*SSQANSFLFSRASF
Trigger: GAAGGAGGCCCTTGAGAAAAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAACTTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp GATCTCAGACAAGTTTCCAAGGACGTTCCAGACGGCTTTATGGGATaGGTGCTCCTCACAAGCAAACAGCTTTCTTTTCTCAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: DLRQVSKDVPDGFMG*VLLTSKQLSFLKGL
Trigger: GAGGCCCTTGAGAAAAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAACTTGTCTGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp CCCTGGATCTCAGACAAGTTTCCAAGGACGTTCCAGACGGCTTTATaGGATGGGTGCTCCTCACAAGCAAACAGCTTTCTTTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: PWISDKFPRTFQTAL*DGCSSQANSFLFSR
Trigger: CCTTGAGAAAAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAACTTGTCTGAGATCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp CTCCCACTGGGAGTCCACAATGGCCTAATGCACGTTTCAAGCTCTTaGTTTCTATCAAACGGCTCGCTCAAGGTGGGTAACCAATGGAAA +
Preference number: 5 (lower is better)
Translates to: LPLGVHNGLMHVSSS*FLSNGSLKVGNQWK
Trigger: TTTCCATTGGTTACCCACCTTGAGCGAGCCGTTTGATAGAAACCAAGAGCTTGAAACGTGCATTAGGCCATTGTGGACTCCCAGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATAGGACCCCTCGGGCCTaGTTCACCTCACACATCACG +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHRTPRA*FTSHIT
Trigger: CGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCTGCAGGTCTCATTGTaGTTCACACCCATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LSEWLTADCLENLGRPGPLQVSL*FTPIRS
Trigger: ACTTCTGATGGGTGTGAACAACAATGAGACCTGCAG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCTTTGGGAAATCATTTaGTACCGGATCCTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDLWEII*YRILRK
Trigger: CTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACAGGAACGAGAACAGATaGAAACCAGAAACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDRNENR*KPETKP
Trigger: TGGCTTTGTTTCTGGTTTCAATCTGTTCTCGTTCCT...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CCTAGAAAACCTAGGAAGGCCTGGTCCCTCTGGGTTACTGACAGCGTCTACCCTTTAAAGTGTGATACCTaGCTTTCCGCAAGGAGATTT +
Preference number: 5 (lower is better)
Translates to: PRKPRKAWSLWVTDSVYPLKCDT*LSARRF
Trigger: AAATCTCCTTGCGGAAAGCAAGGTATCACACTTTAA...AGGGTAGACGCTGTCAGTAACCCAGAGGGACCAGGCCTTCCTAGGTTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTTCACACATCACGAAGTaGATTTTGGCAACGGAAGGA +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTSHITK*ILATEG
Trigger: TCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGA...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp TGGACCTGCAGTAGTATGGGAAGCTCACGGCCTAAATACCGACTGCCCTCTGACCAATTCAGAAGGGTTTaGTGCTTGGAGAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: WTCSSMGSSRPKYRLPSDQFRRV*CLEKFI
Trigger: AATGAACTTCTCCAAGCACAAAACCCTTCTGAATTG...GTCAGAGGGCAGTCGGTATTTAGGCCGTGAGCTTCCCATACTACTGCAGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCCCCTGCAATTCTGTTTaGGAGCTCAGGTACAATTCA +
Preference number: 5 (lower is better)
Translates to: LSEWLTADCLENLGRPGPPCNSV*ELRYNS
Trigger: TGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGG...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CTAAGTGAGTGGTTAACAGCTGACTGCCTAGAAAACCTAGGAAGGCCTGGTCCCGTCCATTTTACAGCCTaGGACAACAGAAGAGAACCA +
Preference number: 5 (lower is better)
Translates to: LSEWLTADCLENLGRPGPVHFTA*DNRREP
Trigger: TGGTTCTCTTCTGTTGTCCAAGGCTGTAAAATGGAC...GGGACCAGGCCTTCCTAGGTTTTCTAGGCAGTCAGCTGTTAACCACTCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS GCA 90 bp TCAAAAATGTTCTGTATTTCAATCCGGTGTGGGTGGTTTGCATTCTaGTCCAACTCTTTGAGAAGACGTTCTGTCTCCTGTGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SKMFCISIRCGWFAF*SNSLRRRSVSCAAR
Trigger: GCGGGCAGCACAGGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 90 bp AAGGATGTGCATCCTCGGAAAGCGGCAGGGAAGGCTGCTTTTTCATaGAGTCTTCGATTATCTCTTGCACCGCACAGATTTTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: KDVHPRKAAGKAAFS*SLRLSLAPHRFWLK
Trigger: CTTTAACCAAAATCTGTGCGGTGCAAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTCCTCAGAATGATATCTaGGATGCCTTCTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTPQNDI*DAFFKL
Trigger: GAGTTTGAAGAAGGCATCCAAGATATCATTCTGAGG...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS TCA 90 bp CAAACAGCTTTCTTTTCTCAAGGGCCTCCTTCAAGTCAATATATGTaGTCAGAGTTTGCACCTCGATCACTGCTCTTCTCCTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QTAFFSQGPPSSQYM*SEFAPRSLLFSWLP
Trigger: GGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCTTGAGAAAAGAAAGCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 90 bp TGGTATTTCAGTACTCCCATTCATCAGATTTCAGGTCGAGATAGCTaGGAATATTCTGCGCAAGCCTCACAGCTTGTTTCCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: WYFSTPIHQISGRDS*EYSAQASQLVSWQP
Trigger: AGGCTGCCAGGAAACAAGCTGTGAGGCTTGCGCAGAATATTCTCAGCTATCTCGACCTGAAATCTGATGAATGGGAGTACTGAAATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 90 bp GGCTTCCTCAAAAATGTTCTGTATTTCAATCCGGTGTGGGTGGTTTaGATTCTGCTCCAACTCTTTGAGAAGACGTTCTGTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GFLKNVLYFNPVWVV*ILLQLFEKTFCLLC
Trigger: GCACAGGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTTGAGGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp GACTGGGCTTCCTCAAAAATGTTCTGTATTTCAATCCGGTGTGGGTaGTTTGCATTCTGCTCCAACTCTTTGAGAAGACGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DWASSKMFCISIRCG*FAFCSNSLRRRSVS
Trigger: GGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTTGAGGAAGCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 90 bp GAGGGACTGGGCTTCCTCAAAAATGTTCTGTATTTCAATCCGGTGTaGGTGGTTTGCATTCTGCTCCAACTCTTTGAGAAGACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: EGLGFLKNVLYFNPV*VVCILLQLFEKTFC
Trigger: ACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTTGAGGAAGCCCAGTCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTCCGGTGTGGGTGGTTaGCATTCTGCTCCAACTCTT +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHSGVGG*HSAPTL
Trigger: AAGAGTTGGAGCAGAATGCAAACCACCCACACCGGA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GCACCCTGTACTCACACACGATGCCCACAGCTTGGCAAAAGGTACACAAACACTACTAATAGAAGGATGTaGGTTTCCCATATCCATACT +
Preference number: 5 (lower is better)
Translates to: APCTHTRCPQLGKRYTNTTNRRM*VSHIHT
Trigger: AGTATGGATATGGGAAACCAACATCCTTCTATTAGT...AGTGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTGTGTGAGTACAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATTGCCCGCTTCCTAGCTaGCTGAATATCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHCPLPS*LNISFS
Trigger: GGAAAAGGAGATATTCAGCAAGCTAGGAAGCGGGCA...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCACGATGCCCACAGCTaGGCAAAAGGTACACAAACA +
Preference number: 5 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFHDAHS*AKGTQT
Trigger: TGTTTGTGTACCTTTTGCCAAGCTGTGGGCATCGTG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS TCA 90 bp CTCTTCCAGCCGGATGTAGTTCTTATCGGTTCGATTTCCATCAAATaGAAGAACTTCTCCCTGGATCTCAGACAAGTTTCCAAGGACGTT +
Preference number: 5 (lower is better)
Translates to: LFQPDVVLIGSISIK*KNFSLDLRQVSKDV
Trigger: AACGTCCTTGGAAACTTGTCTGAGATCCAGGGAGAAGTTCTTTCATTTGATGGAAATCGAACCGATAAGAACTACATCCGGCTGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTTTCTGCTCCAACTCTTaGAGAAGACGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFFCSNS*RRRSVS
Trigger: GGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAA...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACGTCTTCGATTATCTCTaGCACCGCACAGATTTTGGT +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYVFDYL*HRTDFG
Trigger: ACCAAAATCTGTGCGGTGCAAGAGATAATCGAAGAC...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACTCACACATCACGAAGTaGATTTTGGCAACGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYSHITK*ILATEG
Trigger: TCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGA...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACATATGTGATCAGAGTTaGCACCTCGATCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYICDQS*HLDHCS
Trigger: AGAGCAGTGATCGAGGTGCAAACTCTGATCACATAT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS TCA 90 bp TTGAGAAGACGTTCTGTCTCCTGTGCTGCCCGCTTCCTAGCTTGCTaGATATCTCCTTTTCCTTCAGTATCTACAGAGTCTATTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LRRRSVSCAARFLAC*ISPFPSVSTESISK
Trigger: TTTTGAAATAGACTCTGTAGATACTGAAGGAAAAGGAGATATTCAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACGTCTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCCTCAGAATGATATCTaGGATGCCTTCTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYPQNDI*DAFFKL
Trigger: GAGTTTGAAGAAGGCATCCAAGATATCATTCTGAGG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACAGGAACGAGAACAGATaGAAACCAGAAACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYRNENR*KPETKP
Trigger: TGGCTTTGTTTCTGGTTTCAATCTGTTCTCGTTCCT...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS CCA 90 bp GACTTACCTCATCCAACTGTCCAATTAAACCCTGCAATTCTGTTTTaGAGCTCAGGTACAATTCAGAAGGGTTTTGTGCTTGGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: DLPHPTVQLNPAILF*SSGTIQKGFVLGEV
Trigger: AACTTCTCCAAGCACAAAACCCTTCTGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACAGTTGGATGAGGTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS-3UTR CAA 90 bp AATTACCCATGTGAACAATTCAAAATGACGGTGGAAGAGCTGAGCACCCTGTACCAGAACATGTACTGCTaGTGTTTGAACCTTACTCTT +
Preference number: 5 (lower is better)
Translates to: NYPCEQFKMTVEELSTLYQNMYC*CLNLTL
Trigger: AAGAGTAAGGTTCAAACACAAGCAGTACATGTTCTG...GTACAGGGTGCTCAGCTCTTCCACCGTCATTTTGAATTGTTCACATGGGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATAGACAAGCTGAAGATTaGTTAAGGGCTATGCTTCTG +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHRQAED*LRAMLL
Trigger: CAGAAGCATAGCCCTTAACAAATCTTCAGCTTGTCT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATACTGAAGCCGATAACTaGCTGTTCTACACTTTTTAC +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHTEADN*LFYTFY
Trigger: GTAAAAAGTGTAGAACAGCAAGTTATCGGCTTCAGT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTCAATTCAGAAGGGTTTaGTGCTTGGAGAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFQFRRV*CLEKFI
Trigger: AATGAACTTCTCCAAGCACAAAACCCTTCTGAATTG...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp CAAGGCACTTCAGAACTTTGGGAAATCATTTTGTACCGGATCCTCAGAAAGCATACTTACAAGGTATTATaGCTGGTCCTTTATCCCTTC +
Preference number: 5 (lower is better)
Translates to: QGTSELWEIILYRILRKHTYKVL*LVLYPF
Trigger: GAAGGGATAAAGGACCAGCAATAATACCTTGTAAGT...ATGCTTTCTGAGGATCCGGTACAAAATGATTTCCCAAAGTTCTGAAGTGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS-3UTR CAA 90 bp GTAACCCGTCTCCAGTATTCATCCTCCAACTACAGGTATGAGTGTTTCCTTTTTACTAATAGAAGGATGTaGGTTTCCCATATCCATACT +
Preference number: 5 (lower is better)
Translates to: VTRLQYSSSNYRYECFLFTNRRM*VSHIHT
Trigger: AGTATGGATATGGGAAACCAACATCCTTCTATTAGT...AAAAAGGAAACACTCATACCTGTAGTTGGAGGATGAATACTGGAGACGGGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299204.6
ENST00000445922.2
CDS GCA 72 bp CTGAGCGGGGCAGCCGGTGAAGGGGCCGCTACTGGCTaGAGCAGCCGCTCCGGGCGTCTTGGCCCGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LSGAAGEGAATG*SSRSGRLGPGA
Trigger: GGCACCCGGGCCAAGACGCCCGGAGCGGCTGCTGCAGCCAGTAGCGGCCCCTTCACCGGCTGCCCCGCTCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS CCA 72 bp ATGCGGTCTTGGCGTCCCGTGGCTGAGGTGGCGAGGTaGAAGATCAGCCCTTTACGGGGTGCGGCACCGGAG +
Preference number: 6 (lower is better)
Translates to: MRSWRPVAEVAR*KISPLRGAAPE
Trigger: CTCCGGTGCCGCACCCCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp AAGTCTGAATTGGATGCGGTCTTGGCGTCCCGTGGCTaGGGTGGCGAGGTGGAAGATCAGCCCTTTACGGGG +
Preference number: 6 (lower is better)
Translates to: KSELDAVLASRG*GGEVEDQPFTG
Trigger: CCCCGTAAAGGGCTGATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp GCGATCAGCCCCGAGAGCACACAGGATAAGTGCCTGCAGGTCTCATaGTTGTTCACACCCATCAGAAGTGCAATCAGGACCCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: AISPESTQDKCLQVS*LFTPIRSAIRTPRA
Trigger: GGCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp CGCCCTTCCCTCTTGGCCCTTTACCCAAAAGAAGTCTaGATTGGATGCGGTCTTGGCGTCCCGTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: RPSLLALYPKEV*IGCGLGVPWLR
Trigger: CCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGTAAAGGGCCAAGAGGGAAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 90 bp AGGACCCCTCGGGCCTTGTTCACCTCACACATCACGAAGTTGATTTaGGCAACGGAAGGATGTGCATCCTCGGAAAGCGGCAGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RTPRALFTSHITKLI*ATEGCASSESGREG
Trigger: GCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp GCGGATCAACAGCATCCAGGGCTAGCAGCTGCTTGGTaGGCAGCTCTTCCAGCCGGATGTAGTTCTTATCGG +
Preference number: 6 (lower is better)
Translates to: ADQQHPGLAAAW*AALPAGCSSYR
Trigger: CCGATAAGAACTACATCCGGCTGGAAGAGCTGCTCACCAAGCAGCTGCTAGCCCTGGATGCTGTTGATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp TTCCCTCTTGGCCCTTTACCCAAAAGAAGTCTGAATTaGATGCGGTCTTGGCGTCCCGTGGCTGAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: FPLGPLPKRSLN*MRSWRPVAEVA
Trigger: CGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGTAAAGGGCCAAGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 90 bp GCAATCAGGACCCCTCGGGCCTTGTTCACCTCACACATCACGAAGTaGATTTTGGCAACGGAAGGATGTGCATCCTCGGAAAGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: AIRTPRALFTSHITK*ILATEGCASSESGR
Trigger: CCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp ATCAGCCCCGAGAGCACACAGGATAAGTGCCTGCAGGTCTCATTGTaGTTCACACCCATCAGAAGTGCAATCAGGACCCCTCGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: ISPESTQDKCLQVSL*FTPIRSAIRTPRAL
Trigger: CAAGGCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp CCTTTACCCAAAAGAAGTCTGAATTGGATGCGGTCTTaGCGTCCCGTGGCTGAGGTGGCGAGGTGGAAGATC +
Preference number: 6 (lower is better)
Translates to: PLPKRSLNWMRS*RPVAEVARWKI
Trigger: GATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CCA 72 bp ACAAGCACCAAAAGAAGTCTGAATTGGATGCGGTCTTaGCGTCCCGTGGCTGAGGTGGCGAGGTGGAAGATC +
Preference number: 6 (lower is better)
Translates to: TSTKRSLNWMRS*RPVAEVARWKI
Trigger: GATCTTCCACCTCGCCACCTCAGCCACGGGACGCCAAGACCGCATCCAATTCAGACTTCTTTTGGTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2
CDS GCA 72 bp CCTGCAGGTCTCATTGTTGTTCACACCCATCAGAAGTaGAATCAGGACCCCTCGGGCCTTGTTCACCTCACA +
Preference number: 6 (lower is better)
Translates to: PAGLIVVHTHQK*NQDPSGLVHLT
Trigger: TGTGAGGTGAACAAGGCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp CAGCGATCAGCCCCGAGAGCACACAGGATAAGTGCCTaGAGGTCTCATTGTTGTTCACACCCATCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: QRSAPRAHRISA*RSHCCSHPSEV
Trigger: CACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGATCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp AGGTCAGCGATCAGCCCCGAGAGCACACAGGATAAGTaGCTGCAGGTCTCATTGTTGTTCACACCCATCAGA +
Preference number: 6 (lower is better)
Translates to: RSAISPESTQDK*LQVSLLFTPIR
Trigger: TCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGGGCTGATCGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp CCCCTCGGGCCTTGTTCACCTCACACATCACGAAGTTaGTTTTGGCAACGGAAGGATGTGCATCCTCGGAAA +
Preference number: 6 (lower is better)
Translates to: PLGPCSPHTSRS*FWQRKDVHPRK
Trigger: TTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp CCCGAGAGCACACAGGATAAGTGCCTGCAGGTCTCATaGTTGTTCACACCCATCAGAAGTGCAATCAGGACC +
Preference number: 6 (lower is better)
Translates to: PESTQDKCLQVS*LFTPIRSAIRT
Trigger: GGTCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp TGTATTTCAATCCGGTGTGGGTGGTTTGCATTCTGCTCCAACTCTTaGAGAAGACGTTCTGTCTCCTGTGCTGCCCGCTTCCTAGCTTGC +
Preference number: 6 (lower is better)
Translates to: CISIRCGWFAFCSNS*RRRSVSCAARFLAC
Trigger: GCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp GAAGGATGTGCATCCTCGGAAAGCGGCAGGGAAGGCTaGTTTTTCATGCAGTCTTCGATTATCTCTTGCACC +
Preference number: 6 (lower is better)
Translates to: EGCASSESGREG*FFMQSSIISCT
Trigger: GGTGCAAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp AGGGCCTCCTTCAAGTCAATATATGTGATCAGAGTTTaGACCTCGATCACTGCTCTTCTCCTGGCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RASFKSIYVIRV*TSITALLLASR
Trigger: CCGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp TTTCTATCAAACGGCTCGCTCAAGGTGGGTAACCAATaGAAACGCATAATCTATCCCCGGCGGATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: FLSNGSLKVGNQ*KRIIYPRRMSW
Trigger: CCAGGACATCCGCCGGGGATAGATTATGCGTTTCCATTGGTTACCCACCTTGAGCGAGCCGTTTGATAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 72 bp ACACCCATCAGAAGTGCAATCAGGACCCCTCGGGCCTaGTTCACCTCACACATCACGAAGTTGATTTTGGCA +
Preference number: 6 (lower is better)
Translates to: TPIRSAIRTPRA*FTSHITKLILA
Trigger: TGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp GAGAGCACACAGGATAAGTGCCTGCAGGTCTCATTGTaGTTCACACCCATCAGAAGTGCAATCAGGACCCCT +
Preference number: 6 (lower is better)
Translates to: ESTQDKCLQVSL*FTPIRSAIRTP
Trigger: AGGGGTCCTGATTGCACTTCTGATGGGTGTGAACAACAATGAGACCTGCAGGCACTTATCCTGTGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp AGCCTACTAATAGAAGGATGTTGGTTTCCCATATCCATACTTTTGTaGTGTTCAGTTTCACAAGCACTGTCCCGCCCGCGCCATCGCGCG +
Preference number: 6 (lower is better)
Translates to: SLLIEGCWFPISILL*CSVSQALSRPRHRA
Trigger: CGCGCGATGGCGCGGGCGGGACAGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTATTAGTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299204.6
CDS CAA 90 bp TTGTTGTTCACACCCATCAGAAGTGCAATCAGGACCCCTCGGGCCTaGTTCACCTCACACATCACGAAGTTGATTTTGGCAACGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LLFTPIRSAIRTPRA*FTSHITKLILATEG
Trigger: TCCTTCCGTTGCCAAAATCAACTTCGTGATGTGTGAGGTGAACAAGGCCCGAGGGGTCCTGATTGCACTTCTGATGGGTGTGAACAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp TCTTTTCTCAAGGGCCTCCTTCAAGTCAATATATGTGATCAGAGTTaGCACCTCGATCACTGCTCTTCTCCTGGCTTCCCGGATGCAGGG +
Preference number: 6 (lower is better)
Translates to: SFLKGLLQVNICDQS*HLDHCSSPGFPDAG
Trigger: CCCTGCATCCGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCTTGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp TTTCAGGTCGAGATAGCTGAGAATATTCTGCGCAAGCCTCACAGCTaGTTTCCTGGCAGCCTTACACTTCTCTTCTCCCTGCGGATCAAC +
Preference number: 6 (lower is better)
Translates to: FQVEIAENILRKPHS*FPGSLTLLFSLRIN
Trigger: GTTGATCCGCAGGGAGAAGAGAAGTGTAAGGCTGCCAGGAAACAAGCTGTGAGGCTTGCGCAGAATATTCTCAGCTATCTCGACCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp CATCCTCGGAAAGCGGCAGGGAAGGCTGCTTTTTCATaGAGTCTTCGATTATCTCTTGCACCGCACAGATTT +
Preference number: 6 (lower is better)
Translates to: HPRKAAGKAAFS*SLRLSLAPHRF
Trigger: AAATCTGTGCGGTGCAAGAGATAATCGAAGACTGCATGAAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp ACACATCACGAAGTTGATTTTGGCAACGGAAGGATGTaGATCCTCGGAAAGCGGCAGGGAAGGCTGCTTTTT +
Preference number: 6 (lower is better)
Translates to: THHEVDFGNGRM*ILGKRQGRLLF
Trigger: AAAAAGCAGCCTTCCCTGCCGCTTTCCGAGGATGCACATCCTTCCGTTGCCAAAATCAACTTCGTGATGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp GGAGTCCACAATGGCCTAATGCACGTTTCAAGCTCTTaGTTTCTATCAAACGGCTCGCTCAAGGTGGGTAAC +
Preference number: 6 (lower is better)
Translates to: GVHNGLMHVSSS*FLSNGSLKVGN
Trigger: GTTACCCACCTTGAGCGAGCCGTTTGATAGAAACCAAGAGCTTGAAACGTGCATTAGGCCATTGTGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 72 bp AAGGGCCTCCTTCAAGTCAATATATGTGATCAGAGTTaGCACCTCGATCACTGCTCTTCTCCTGGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: KGLLQVNICDQS*HLDHCSSPGFP
Trigger: CGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp CGTTCTGTCTCCTGTGCTGCCCGCTTCCTAGCTTGCTaGATATCTCCTTTTCCTTCAGTATCTACAGAGTCT +
Preference number: 6 (lower is better)
Translates to: RSVSCAARFLAC*ISPFPSVSTES
Trigger: AGACTCTGTAGATACTGAAGGAAAAGGAGATATTCAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp GTCAATATATGTGATCAGAGTTTGCACCTCGATCACTaGTCTTCTCCTGGCTTCCCGGATGCAGGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: VNICDQSLHLDH*SSPGFPDAGVF
Trigger: AAAAACCCCTGCATCCGGGAAGCCAGGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp TTTCCAAGGACGTTCCAGACGGCTTTATGGGATGGGTaGTCCTCACAAGCAAACAGCTTTCTTTTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: FPRTFQTALWDG*SSQANSFLFSR
Trigger: CCTTGAGAAAAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp CAAGTTTCCAAGGACGTTCCAGACGGCTTTATGGGATaGGTGCTCCTCACAAGCAAACAGCTTTCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: QVSKDVPDGFMG*VLLTSKQLSFL
Trigger: GAGAAAAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp TCAGACAAGTTTCCAAGGACGTTCCAGACGGCTTTATaGGATGGGTGCTCCTCACAAGCAAACAGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: SDKFPRTFQTAL*DGCSSQANSFL
Trigger: AAGAAAGCTGTTTGCTTGTGAGGAGCACCCATCCCATAAAGCCGTCTGGAACGTCCTTGGAAACTTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp TTCAGTTTCACAAGCACTCCCACTGGGAGTCCACAATaGCCTAATGCACGTTTCAAGCTCTTGGTTTCTATC +
Preference number: 6 (lower is better)
Translates to: FSFTSTPTGSPQ*PNARFKLLVSI
Trigger: GATAGAAACCAAGAGCTTGAAACGTGCATTAGGCCATTGTGGACTCCCAGTGGGAGTGCTTGTGAAACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 72 bp ATAGAAGGATGTTGGTTTCCCATATCCATACTTTTGTaGTGTTCAGTTTCACAAGCACTGTCCCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: IEGCWFPISILL*CSVSQALSRPR
Trigger: GCGCGGGCGGGACAGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299204.6
CDS CAA 72 bp AAGACGTTCTGTCTCCTGTGCTGCCCGCTTCCTAGCTaGCTGAATATCTCCTTTTCCTTCAGTATCTACAGA +
Preference number: 6 (lower is better)
Translates to: KTFCLLCCPLPS*LNISFSFSIYR
Trigger: TCTGTAGATACTGAAGGAAAAGGAGATATTCAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 90 bp CTCTTTGAGAAGACGTTCTGTCTCCTGTGCTGCCCGCTTCCTAGCTaGCTGAATATCTCCTTTTCCTTCAGTATCTACAGAGTCTATTTC +
Preference number: 6 (lower is better)
Translates to: LFEKTFCLLCCPLPS*LNISFSFSIYRVYF
Trigger: GAAATAGACTCTGTAGATACTGAAGGAAAAGGAGATATTCAGCAAGCTAGGAAGCGGGCAGCACAGGAGACAGAACGTCTTCTCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp AGTACTCCCATTCATCAGATTTCAGGTCGAGATAGCTaGGAATATTCTGCGCAAGCCTCACAGCTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: STPIHQISGRDS*EYSAQASQLVS
Trigger: GGAAACAAGCTGTGAGGCTTGCGCAGAATATTCTCAGCTATCTCGACCTGAAATCTGATGAATGGGAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp TTCTTTTCTCAAGGGCCTCCTTCAAGTCAATATATGTaGTCAGAGTTTGCACCTCGATCACTGCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FFSQGPPSSQYM*SEFAPRSLLFS
Trigger: GGAGAAGAGCAGTGATCGAGGTGCAAACTCTGATCACATATATTGACTTGAAGGAGGCCCTTGAGAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp GGCTTCCTCAAAAATGTTCTGTATTTCAATCCGGTGTaGGTGGTTTGCATTCTGCTCCAACTCTTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: GFLKNVLYFNPV*VVCILLQLFEK
Trigger: CTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTTGAGGAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp AAACTCATCAGTTACGCAGTTGCCTCCATTATAAAATaGCACAATTTTCTCTCTCACGAGGGACTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: KLISYAVASIIK*HNFLSHEGLGF
Trigger: GAAGCCCAGTCCCTCGTGAGAGAGAAAATTGTGCCATTTTATAATGGAGGCAACTGCGTAACTGATGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp TGCAGTCTTCGATTATCTCTTGCACCGCACAGATTTTaGTTAAAGTGTGATACCTTGCTTTCCGCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: CSLRLSLAPHRF*LKCDTLLSARR
Trigger: TCTCCTTGCGGAAAGCAAGGTATCACACTTTAACCAAAATCTGTGCGGTGCAAGAGATAATCGAAGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp CTAATAGAAGGATGTTGGTTTCCCATATCCATACTTTaGTTGTGTTCAGTTTCACAAGCACTGTCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: LIEGCWFPISIL*LCSVSQALSRP
Trigger: CGGGCGGGACAGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299204.6
CDS TCA 72 bp CCGGATGTAGTTCTTATCGGTTCGATTTCCATCAAATaGAAGAACTTCTCCCTGGATCTCAGACAAGTTTCC +
Preference number: 6 (lower is better)
Translates to: PDVVLIGSISIK*KNFSLDLRQVS
Trigger: GGAAACTTGTCTGAGATCCAGGGAGAAGTTCTTTCATTTGATGGAAATCGAACCGATAAGAACTACATCCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp ATAGAAGGATGTTGGTTTCCCATATCCATACTTTTGTaGTGTTCAGTTTCACAAGCACTCCCACTGGGAGTC +
Preference number: 6 (lower is better)
Translates to: IEGCWFPISILL*CSVSQALPLGV
Trigger: GACTCCCAGTGGGAGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 90 bp AGACTTACCTCATCCAACTGTCCAATTAAACCCTGCAATTCTGTTTaGGAGCTCAGGTACAATTCAGAAGGGTTTTGTGCTTGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: RLTSSNCPIKPCNSV*ELRYNSEGFCAWRS
Trigger: ACTTCTCCAAGCACAAAACCCTTCTGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACAGTTGGATGAGGTAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS TCA 72 bp ATTATCTCTTGCACCGCACAGATTTTGGTTAAAGTGTaGTACCTTGCTTTCCGCAAGGAGATTTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: IISCTAQILVKV*YLAFRKEIFPP
Trigger: TGGAGGAAAAATCTCCTTGCGGAAAGCAAGGTATCACACTTTAACCAAAATCTGTGCGGTGCAAGAGATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS GCA 72 bp AAAAATGTTCTGTATTTCAATCCGGTGTGGGTGGTTTaGATTCTGCTCCAACTCTTTGAGAAGACGTTCTGT +
Preference number: 6 (lower is better)
Translates to: KNVLYFNPVWVV*ILLQLFEKTFC
Trigger: ACAGAACGTCTTCTCAAAGAGTTGGAGCAGAATGCAAACCACCCACACCGGATTGAAATACAGAACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CCA 72 bp CATCCAACTGTCCAATTAAACCCTGCAATTCTGTTTTaGAGCTCAGGTACAATTCAGAAGGGTTTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: HPTVQLNPAILF*SSGTIQKGFVL
Trigger: AAGCACAAAACCCTTCTGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACAGTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp TCATCCAACTGTCCAATTAAACCCTGCAATTCTGTTTaGGAGCTCAGGTACAATTCAGAAGGGTTTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SSNCPIKPCNSV*ELRYNSEGFCA
Trigger: AGCACAAAACCCTTCTGAATTGTACCTGAGCTCCAAAACAGAATTGCAGGGTTTAATTGGACAGTTGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp CTAATAGAAGGATGTTGGTTTCCCATATCCATACTTTaGTTGTGTTCAGTTTCACAAGCACTCCCACTGGGA +
Preference number: 6 (lower is better)
Translates to: LIEGCWFPISIL*LCSVSQALPLG
Trigger: TCCCAGTGGGAGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337322.4
CDS CAA 90 bp ACCACTGAAGCCGATAACTTGCTGTTCTACACTTTTTACTTCCTTTaGGATTTCCTGAAGCCTACTAATAGAAGGATGTTGGTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: TTEADNLLFYTFYFL*DFLKPTNRRMLVSH
Trigger: ATGGGAAACCAACATCCTTCTATTAGTAGGCTTCAGGAAATCCAAAAGGAAGTAAAAAGTGTAGAACAGCAAGTTATCGGCTTCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp CTTTTGGATTTCCTGAAGCCTACTAATAGAAGGATGTaGGTTTCCCATATCCATACTTTTGTTGTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: LLDFLKPTNRRM*VSHIHTFVVFS
Trigger: ACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTATTAGTAGGCTTCAGGAAATCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299204.6
ENST00000337322.4
ENST00000445922.2
CDS CAA 72 bp CTAATAGAAGGATGTTGGTTTCCCATATCCATACTTTaGTTGTGTTCAGTTTCACAAGCACCAAAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: LIEGCWFPISIL*LCSVSQAPKEV
Trigger: GACTTCTTTTGGTGCTTGTGAAACTGAACACAACAAAAGTATGGATATGGGAAACCAACATCCTTCTATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445922.2