RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BACH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156273

Ensembl transcript IDs: ENST00000286800.8, ENST00000399921.5, ENST00000422809.5, ENST00000435072.1, ENST00000447177.5, ENST00000451655.5, ENST00000462262.1, ENST00000468059.1, ENST00000546469.5, ENST00000547141.5, ENST00000548219.5, ENST00000548467.1, ENST00000550131.5

Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTaGTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCACG +
Preference number: 1 (lower is better)
Translates to: SLLRVHEAEKGVGWG*CSLILGSRSSSKLT
Trigger: CGTGAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR CCA 90 bp CTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTaGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: LCSLLRVHEAEKGVG*GCCSLILGSRSSSK
Trigger: CTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR TCA 90 bp AGTCTGGACAAATTTGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTaGGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTC +
Preference number: 1 (lower is better)
Translates to: SLDKFAVFSAQGPRS*EGCWLGLLQSHSRF
Trigger: GAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAAATTTGTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR GCA 90 bp GACATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTaGTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCACATT +
Preference number: 1 (lower is better)
Translates to: DMKTGPHILSRARPT*FRLVHTQWVVAAHI
Trigger: AATGTGGGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR GCA 90 bp TCAGTTTCTGTAGATGAGAAGTCTGGACAAATTTGCTGTGTTCTCTaGTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: SVSVDEKSGQICCVL*SGSTKLRRVLAGAA
Trigger: AGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAAATTTGTCCAGACTTCTCATCTACAGAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR GCA 90 bp TCCATACTGAAGAGGAGAAGCAGCCCCCGTCTTAGGCCAACCACTTaGCTATTTACTAAATCTTCCCAATGTAGCTTAAAGCCTGATTTT +
Preference number: 1 (lower is better)
Translates to: SILKRRSSPRLRPTT*LFTKSSQCSLKPDF
Trigger: AAAATCAGGCTTTAAGCTACATTGGGAAGATTTAGTAAATAGGCAAGTGGTTGGCCTAAGACGGGGGCTGCTTCTCCTCTTCAGTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR GCA 90 bp ACACACACACACACACACACACACAAATTCTTTTGCAGTATGGGATaGACTATCAGAATTATTCTCCCTGACAAATTCTTGAGTGTACTT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHKFFCSMG*TIRIILPDKFLSVL
Trigger: AAGTACACTCAAGAATTTGTCAGGGAGAATAATTCTGATAGTGCATCCCATACTGCAAAAGAATTTGTGTGTGTGTGTGTGTGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CCA 90 bp GATTATTTGACATTTGCACATACACAAACTGATACAACCAATAGTTaGGTGTACACTGAGGTAGGAAATCAAGGGTTCCATTGGCTTAAG +
Preference number: 1 (lower is better)
Translates to: DYLTFAHTQTDTTNS*VYTEVGNQGFHWLK
Trigger: CTTAAGCCAATGGAACCCTTGATTTCCTACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGTCAAATAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp TGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGGTGTTGGCTGGGGCTaGTGCAGTCTCATTCTAGGT +
Preference number: 2 (lower is better)
Translates to: CCVLCSGSTKLRRVLAGAGVGWG*CSLILG
Trigger: ACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC...AGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR CAA 90 bp CTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTaGTTCATACACAGTGGGTGGTGGCTGCCCACATTAGCTAGACAA +
Preference number: 2 (lower is better)
Translates to: LVPIYSQGQGQLASD*FIHSGWWLPTLARQ
Trigger: TTGTCTAGCTAATGTGGGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CAA 90 bp AGACATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTaGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCACAT +
Preference number: 2 (lower is better)
Translates to: RHEDWSPYTLKGKAN*LQTCSYTVGGGCPH
Trigger: ATGTGGGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCCCACGGTGGAAAAATaGACAGCTTTACATGTTGGT +
Preference number: 2 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAPTVEK*TALHVG
Trigger: ACCAACATGTAAAGCTGTTCATTTTTCCACCGTGGG...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTTTCCCCGTGATGTCTaGTTTTCTGGCATTGGTGAC +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTFPRDV*FSGIGD
Trigger: GTCACCAATGCCAGAAAACCAGACATCACGGGGAAA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCATACCACACCAAATTTaGAGAAGAGAGCAAGGATTC +
Preference number: 2 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAIPHQI*RREQGF
Trigger: GAATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTAT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CAA 90 bp TCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTTTACATGTaGGTAAGCTCTCCAGATTCTAGGGAGCCTGAGATAATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: SGIGDPRWKNEQLYM*VSSPDSREPEIMLP
Trigger: TGGCAGCATTATCTCAGGCTCCCTAGAATCTGGAGAGCTTACCAACATGTAAAGCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTCACATGGATTTTTCTaGTATCCAGGAGGCAAAATC +
Preference number: 2 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSSHGFF*YPGGKI
Trigger: GATTTTGCCTCCTGGATATCAGAAAAATCCATGTGA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAATATTCCCAGTAGCTaGCACCCTGCTTCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTNIPSS*HPASKN
Trigger: ATTCTTAGAAGCAGGGTGTCAGCTACTGGGAATATT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCAGTGTAATCACTCATaGCACTGTATTCTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTQCNHS*HCILSP
Trigger: AGGACTCAGAATACAGTGGCATGAGTGATTACACTG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCACCGCAAAATGTTATaGGATAGGTGCTCAGTTATC +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTHRKML*DRCSVI
Trigger: GATAACTGAGCACCTATCGCATAACATTTTGCGGTG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCATTAAAACTGGGTTCTaGCAATGTTTCTGTGAATGT +
Preference number: 2 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAIKTGF*QCFCEC
Trigger: ACATTCACAGAAACATTGGCAGAACCCAGTTTTAAT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp GTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCTTTTGCAGACATTATTaGCAGCTTGTTCCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: VGWGCCSLILGSRSSSKLFCRHY*QLVPSK
Trigger: TTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAA...GAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468059.1
3UTR-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGGCTTTCAAGACGCTaGCAAAACTTCAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: PHILSRARPTCFRLVHTQRLSRR*QNFRRK
Trigger: TTTTCTCCTGAAGTTTTGGCAGCGTCTTGAAAGCCT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp TGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTGAAGAATTCACTTTTTaGAGACATTATTGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: CWLGLLQSHSRFKVLFQAEEFTF*RHYWQL
Trigger: AAGCTGCCAATAATGTCTGCAAAAAGTGAATTCTTC...AGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468059.1
3UTR-3UTR TCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAGGAGAAATCATGGTTaGCTTAAAGGAAATTCCCTT +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTRRNHG*LKGNSL
Trigger: AAGGGAATTTCCTTTAAGTCAACCATGATTTCTCCT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTTCAAGCTGTTAAATTaGTGTCTGATATGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTFKLLN*CLICCS
Trigger: ACTGCAGCATATCAGACAGCAATTTAACAGCTTGAA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGGCAGGGAGGGAAAGTaGCACTTAAATCTATTCATG +
Preference number: 2 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHGREGK*HLNLFM
Trigger: CATGAATAGATTTAAGTGTCACTTTCCCTCCCTGCC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTCCATAGCTTTCATTTaGCTCTCAAACACATCTAAC +
Preference number: 2 (lower is better)
Translates to: PHILSRARPTCFRLVHTQSIAFI*LSNTSN
Trigger: GTTAGATGTGTTTGAGAGTCAAATGAAAGCTATGGA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACATTGGTGACCCACGGTaGAAAAATGAACAGCTTTAC +
Preference number: 2 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHIGDPR*KNEQLY
Trigger: GTAAAGCTGTTCATTTTTCCACCGTGGGTCACCAAT...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCTTAGGCCAACCACTTaGCTATTTACTAAATCTTCC +
Preference number: 2 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHLRPTT*LFTKSS
Trigger: GGAAGATTTAGTAAATAGGCAAGTGGTTGGCCTAAG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAAGGCTTTCAAGACGCTaGCAAAACTTCAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVRLSRR*QNFRRK
Trigger: TTTTCTCCTGAAGTTTTGGCAGCGTCTTGAAAGCCT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAATTGGTGACCCACGGTaGAAAAATGAACAGCTTTAC +
Preference number: 2 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVIGDPR*KNEQLY
Trigger: GTAAAGCTGTTCATTTTTCCACCGTGGGTCACCAAT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTCCCCGTGATGTCTaGTTTTCTGGCATTGGTGAC +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFPRDV*FSGIGD
Trigger: GTCACCAATGCCAGAAAACCAGACATCACGGGGAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAACATTCTTTCCCCGTaGTGTCTGGTTTTCTGGCAT +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESNILSP*CLVFWH
Trigger: ATGCCAGAAAACCAGACATCACGGGGAAAGAATGTT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTGCTGTCTGATATGCTaGAGTTTTCATTCTCCTACT +
Preference number: 2 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNCCLIC*SFHSPT
Trigger: AGTAGGAGAATGAAAACTGCAGCATATCAGACAGCA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCCTATTTCACAAACCTaGAGAGTTGCTGCAGATACA +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESPISQT*RVAADT
Trigger: TGTATCTGCAGCAACTCTGCAGGTTTGTGAAATAGG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATAGGAGAAATCATGGTTaGCTTAAAGGAAATTCCCTT +
Preference number: 2 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNRRNHG*LKGNSL
Trigger: AAGGGAATTTCCTTTAAGTCAACCATGATTTCTCCT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTCACATGGATTTTTCTaGTATCCAGGAGGCAAAATC +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESSHGFF*YPGGKI
Trigger: GATTTTGCCTCCTGGATATCAGAAAAATCCATGTGA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTGCTGTCTGATATGCTaGAGTTTTCATTCTCCTACT +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESCCLIC*SFHSPT
Trigger: AGTAGGAGAATGAAAACTGCAGCATATCAGACAGCA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCTTAGGCCAACCACTTaGCTATTTACTAAATCTTCC +
Preference number: 2 (lower is better)
Translates to: QVKMICVSLYHTKFGEESLRPTT*LFTKSS
Trigger: GGAAGATTTAGTAAATAGGCAAGTGGTTGGCCTAAG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CCA 72 bp CTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTaGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCC +
Preference number: 3 (lower is better)
Translates to: LLRVHEAEKGVG*GCCSLILGSRS
Trigger: GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR GCA 72 bp AGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTaGTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RVHEAEKGVGWG*CSLILGSRSSS
Trigger: GGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR GCA 72 bp GTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTaGAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: VHEAEKGVGWGC*SLILGSRSSSK
Trigger: CTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR TCA 72 bp AAATTTGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTaGGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: KFAVFSAQGPRS*EGCWLGLLQSH
Trigger: ATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
3UTR-3UTR CAA 90 bp CTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCGACATTATTGGCAGCTaGTTCCTTCAAAAATGTCTC +
Preference number: 3 (lower is better)
Translates to: LCSLLRVHEAEKGVGWGCDIIGS*FLQKCL
Trigger: GAGACATTTTTGAAGGAACAAGCTGCCAATAATGTC...GCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468059.1
3UTR-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTCTGGTTTTCTGGCATaGGTGACCCACGGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTSGFLA*VTHGGK
Trigger: TTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR GCA 72 bp AAGAGGAGAAGCAGCCCCCGTCTTAGGCCAACCACTTaGCTATTTACTAAATCTTCCCAATGTAGCTTAAAG +
Preference number: 3 (lower is better)
Translates to: KRRSSPRLRPTT*LFTKSSQCSLK
Trigger: CTTTAAGCTACATTGGGAAGATTTAGTAAATAGGCAAGTGGTTGGCCTAAGACGGGGGCTGCTTCTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CAA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGAACAGCTTTACATGTaGGTAAGCTCTCCAGATTCT +
Preference number: 3 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHEQLYM*VSSPDS
Trigger: AGAATCTGGAGAGCTTACCAACATGTAAAGCTGTTC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTCTGGTTTTCTGGCATaGGTGACCCACGGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: QVKMICVSLYHTKFGEESSGFLA*VTHGGK
Trigger: TTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CCA 72 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTaGGTGTACACTGAGGTAGGAAATCAAGGGTTCCAT +
Preference number: 3 (lower is better)
Translates to: TFAHTQTDTTNS*VYTEVGNQGFH
Trigger: ATGGAACCCTTGATTTCCTACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATATACCACACCAAATTaGGAGAAGAGAGCAAGGATT +
Preference number: 3 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVYTTPN*EKRARI
Trigger: AATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTATA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR GCA 72 bp GTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTaGTGTCTGATATGCTGCAGTTTTCATTCTCCTACT +
Preference number: 3 (lower is better)
Translates to: VGTICRCFKLLN*CLICCSFHSPT
Trigger: AGTAGGAGAATGAAAACTGCAGCATATCAGACAGCAATTTAACAGCTTGAAACATCTACAGATAGTTCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCGCCCCTCTGTTGGTCTaGCATGCCCTGATAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CSLLRVHEAEKGVGWGCCAPLLV*HALIEH
Trigger: GTGCTCTATCAGGGCATGTCAGACCAACAGAGGGGC...GCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp TCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCCACGATGGTGCATaGGATGTTGGCGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: SLLRVHEAEKGVGWGCCSLHDGA*DVGEPG
Trigger: CCCTGGTTCGCCAACATCCCATGCACCATCGTGGAG...ACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGGCCAGCACGGACCGGTaGGCGCGGAACCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQASTDR*ARNRCP
Trigger: GGGACAGCGGTTCCGCGCTCACCGGTCCGTGCTGGC...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCACAGGGTCCACGAAGCTaGGAAGGGTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSQGPRS*EGCWLG
Trigger: CCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTG...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCGTGGCTGTGGACATCTaGTGGGACTCCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAVAVDI*WDSCPR
Trigger: GCGAGGGCAGGAGTCCCAGCAGATGTCCACAGCCAC...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCCCCTCTGTTGGTCTaGCATGCCCTGATAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQAPLLV*HALIEH
Trigger: GTGCTCTATCAGGGCATGTCAGACCAACAGAGGGGC...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCGTGGCTGTGGACATCTaGTGGGACTCCTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSVAVDI*WDSCPR
Trigger: GCGAGGGCAGGAGTCCCAGCAGATGTCCACAGCCAC...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TTGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCCAGTCTCCACGATGGTaGATGGGATGTTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLCSLLRVHEAEKGVGWGQSPRW*MGCWQL
Trigger: AAGCTGCCAACATCCCATGCACCATCGTGGAGACTG...GCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR CCA 90 bp TGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTTGGTGCATGGGATGTTaGCGAACCAGGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: CCVLCSGSTKLRRVLAGAWCMGC*RTRVAD
Trigger: ATCAGCAACCCTGGTTCGCCAACATCCCATGCACCA...AGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp CTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTTCTTGTTCTCTGGCTaGACAGGATTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCSLLRVHEAEKGVGWGCFLFSG*TGFTVS
Trigger: GGAGACAGTGAATCCTGTTCAGCCAGAGAACAAGAA...GCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGGTGTTGGCTGGGGCTaGTGCAGTCTCATTCTAGGT +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQGVGWG*CSLILG
Trigger: ACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCAATGACACAAGCATATaGGCAAGGTTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LCSLLRVHEAEKGVGWGCNDTSI*ARFLLG
Trigger: CCCCAGCAAGAACCTTGCCCATATGCTTGTGTCATT...GCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAAGCCAGTCTCCACGATaGTGCATGGGATGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQSQSPR*CMGCWR
Trigger: TCGCCAACATCCCATGCACCATCGTGGAGACTGGCT...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CCA 90 bp GTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCGAGAAGGGTGTTGGCTaGGGCTGCTGCAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: VGWGCCSLILGSRSSSKLEKGVG*GCCSLI
Trigger: AATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC...GAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGCCAGTCTCCACGATaGTGCATGGGATGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSSQSPR*CMGCWQ
Trigger: CTGCCAACATCCCATGCACCATCGTGGAGACTGGCT...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR TCA 90 bp AGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGTTGTGAAAGTCCTTTaGCCTGGTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: RVHEAEKGVGWGCCSLILVVKVL*PGSGLS
Trigger: TGAGAGCCCAGAACCAGGTCAAAGGACTTTCACAAC...TAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGAGATCCCACCACTCTaGCGACACTGTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTEIPPL*RHCSAG
Trigger: GCCTGCGGAACAGTGTCGTCAGAGTGGTGGGATCTC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp GAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTGGGTTGCTGATTAAGTaGCCACAGGCCATGGTTCAG +
Preference number: 4 (lower is better)
Translates to: EKGVGWGCCSLILGSRSSGLLIK*PQAMVQ
Trigger: CTGAACCATGGCCTGTGGTCACTTAATCAGCAACCC...AGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTTCCTCTTCACTCTaGTTTGCCCCTCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQASSSL*FAPLLV
Trigger: GACCAACAGAGGGGCAAATCAGAGTGAAGAGGAAGC...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCGGCAAGGAGTGTCCGTaGTGCAAATGTCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAGKECP*CKCHSR
Trigger: TCTGGAGTGACATTTGCAGCACGGACACTCCTTGCC...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp GAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCTGTTGGTCTGACATaGCCTGATAGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: EKGVGWGCCSLILGSRSSSVGLT*PDRAQG
Trigger: GCCCTGTGCTCTATCAGGGCATGTCAGACCAACAGA...AGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAGCTCTCCATCAGCCTaGCCTACGATTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAASSPSA*PTILEW
Trigger: CCACTCAAGAATCGTAGGCCAGGCTGATGGAGAGCT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCACGTAGCTTCCTCTTCACTCTaGTTTGCCCCTCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGLLQSHSRFKVLFQAHVASSSL*FAPLLV
Trigger: GACCAACAGAGGGGCAAATCAGAGTGAAGAGGAAGC...TACGTGAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAGTGGAAGTAACTGCTaGATGCCGCCAGCACGGACC +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTSGSNC*MPPART
Trigger: GGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTGTTGGCTGGGGCTGCTaGAGTCTCATTCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: CWLGLLQSHSRFKVLFQAVGWGC*SLILGS
Trigger: TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC...AGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGCTCAGAGGTGGCTGTaGACATCTGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTAQRWL*TSAGTP
Trigger: AGGAGTCCCAGCAGATGTCCACAGCCACCTCTGAGC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CAA 72 bp GACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTaGCTTCAGACTTGTTCATACACAGTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DWSPYTLKGKAN*LQTCSYTVGGG
Trigger: GCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATGCCAGCACGGACCGGTaGGCGCGGAACCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNASTDR*ARNRCP
Trigger: GGGACAGCGGTTCCGCGCTCACCGGTCCGTGCTGGC...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTTCTTGTTCTCTGGCTaGACAGGATTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAFLFSG*TGFTVS
Trigger: GGAGACAGTGAATCCTGTTCAGCCAGAGAACAAGAA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTGGGCAATCTGCAGCTaGGTACTTGGCGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSWAICS*VLGEYL
Trigger: CAGATACTCGCCAAGTACTCAGCTGCAGATTGCCCA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCTGCTGACAGAAATCTaGGATCCCACCACTCTGACG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSLLTEI*DPTTLT
Trigger: CGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp GTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCAGTCAAGTTTTCTCTTaGGACAGCGCTGTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VGWGCCSLILGSRSSSKLSQVFS*DSAVQQ
Trigger: TTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACT...GAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp GGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGAGTCAAGTTTTCTCTTaGGACAGCGCTGTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GVGWGCCSLILGSRSSSKSQVFS*DSAVQQ
Trigger: TTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACT...CTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCGAAAGTCCTTTGACCTaGTTCTGGGCTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSESPLT*FWALTN
Trigger: ATTAGTGAGAGCCCAGAACCAGGTCAAAGGACTTTC...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAATGACACAAGCATATaGGCAAGGTTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAANDTSI*ARFLLG
Trigger: CCCCAGCAAGAACCTTGCCCATATGCTTGTGTCATT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCATCTAACCCCAGCATaGCTAAAAGCCACCGCAAAA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAHLTPA*LKATAK
Trigger: TTTTGCGGTGGCTTTTAGCCATGCTGGGGTTAGATG...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTTTTCAGTTGGGCACTaGGAAGCAGGATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAFSVGH*EAGSFF
Trigger: GAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCGGCAGGGAGGGAAAGTaGCACTTAAATCTATTCATG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAGREGK*HLNLFM
Trigger: CATGAATAGATTTAAGTGTCACTTTCCCTCCCTGCC...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAACATTCTTTCCCCGTaGTGTCTGGTTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAANILSP*CLVFWH
Trigger: ATGCCAGAAAACCAGACATCACGGGGAAAGAATGTT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACACAGGGTCCACGAAGCTaGGAAGGGTGTTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTQGPRS*EGCWLG
Trigger: CCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTG...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGGCAAGGAGTGTCCGTaGTGCAAATGTCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTGKECP*CKCHSR
Trigger: TCTGGAGTGACATTTGCAGCACGGACACTCCTTGCC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp GAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGCTTGCGACAGCGCTGTaGAGCAATTCTGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: EAEKGVGWGCCSLILGSRLATAL*SNSVFT
Trigger: AGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAG...CCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp GTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCCTTGCGACAGCGCTGTaGAGCAATTCTGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: VGWGCCSLILGSRSSSKLLATAL*SNSVFT
Trigger: AGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAG...GAGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAGGGCAAGGCCAACTTaGTTCAGACTTGTTCATACA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAARARPT*FRLVHT
Trigger: TGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCACTCATATGTCTGACTaGCACTGTCTTGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAATHMSD*HCLVEE
Trigger: CTCCTCTACAAGACAGTGCCAGTCAGACATATGAGT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCATACACAGTGGGTGGTaGCTGCCCACATTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSIHSGW*LPTLAR
Trigger: TCTAGCTAATGTGGGCAGCCACCACCCACTGTGTAT...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGTTGTGAAAGTCCTTTaGCCTGGTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTVVKVL*PGSGLS
Trigger: TGAGAGCCCAGAACCAGGTCAAAGGACTTTCACAAC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCATTCTTGCTGGGGTTCTaGAACATAATCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSFLLGF*NIIIVS
Trigger: GGAAACGATGATTATGTTTCAGAACCCCAGCAAGAA...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCCTCAGTTTCTGTAGATaGGAAGTCTGGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSLSFCR*EVWTNL
Trigger: CAAATTTGTCCAGACTTCTCATCTACAGAAACTGAG...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAAGGAGTGTCCGTGCTaGAAATGTCACTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTKECPC*KCHSRS
Trigger: GCTTCTGGAGTGACATTTGCAGCACGGACACTCCTT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTTTCCAATTTCCAAATTaGTTGAACAGCCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: CCVLCSGSTKLRRVLAGAFQFPN*LNSLQY
Trigger: GTACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAA...AGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR GCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAGGCTTTCAAGACGCTaGCAAAACTTCAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAARLSRR*QNFRRK
Trigger: TTTTCTCCTGAAGTTTTGGCAGCGTCTTGAAAGCCT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCGTTCTGAGCCATCTTTaGCCACAGCAGGTGATAACT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSVLSHL*PQQVIT
Trigger: AGTTATCACCTGCTGTGGCCAAAGATGGCTCAGAAC...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp GAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGCACATTCTTGTTCTCTaGCTGAACAGGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: EAEKGVGWGCCSLILGSRHILVL*LNRIHC
Trigger: ACAGTGAATCCTGTTCAGCCAGAGAACAAGAATGTG...CCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAACCGTTGTGCATTGAATaGCAGTTTTACCTCACATTC +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQPLCIE*QFYLTF
Trigger: GAATGTGAGGTAAAACTGCCATTCAATGCACAACGG...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCACAATCCAGCTGTTCTaGAGTAAGCTTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSTIQLF*SKLVHF
Trigger: AAAATGCACAAGCTTACTCCAGAACAGCTGGATTGT...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAGCTGTGGACATCTGCTaGGACTCCTGCCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVAVDIC*DSCPRA
Trigger: CGCGCGAGGGCAGGAGTCCCAGCAGATGTCCACAGC...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTATACACAGTGGGTGGTaGCTGCCCACATTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTIHSGW*LPTLAR
Trigger: TCTAGCTAATGTGGGCAGCCACCACCCACTGTGTAT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCTTGTTCATACACAGTaGGTGGTGGCTGCCCACATT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTLVHTQ*VVAAHI
Trigger: AATGTGGGCAGCCACCACCCACTGTGTATGAACAAG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCGATACAACCAATAGTTaGGTGTACACTGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAADTTNS*VYTEVG
Trigger: TCCTACCTCAGTGTACACCCAACTATTGGTTGTATC...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TTGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCAGCTCACGTAGTTGTTaGAAGAATTCACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLCSLLRVHEAEKGVGWGSSRSC*KNSLFA
Trigger: TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCT...GCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCATCATCAACCAGAGCTaGGGCGCGGCGCGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESIINQS*GAARPD
Trigger: GTCGGGCCGCGCCGCGCCTCAGCTCTGGTTGATGAT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286800.8
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCCTCCACAAAGATGGTaGCATCGCACAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQPPQRW*HRTAHL
Trigger: AAGATGTGCTGTGCGATGTCACCATCTTTGTGGAGG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCGCTTTTGCATTTCCTTaGTACCTGCGGAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSAFAFP*YLRSLH
Trigger: GTGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGC...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCATGGACTCATATGTCTaGCTGGCACTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSMDSYV*LALSCR
Trigger: TCTACAAGACAGTGCCAGTCAGACATATGAGTCCAT...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGGTTGTGAAAGTCCTTTaGCCTGGTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQVVKVL*PGSGLS
Trigger: TGAGAGCCCAGAACCAGGTCAAAGGACTTTCACAAC...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTCACATGGATTTTTCTaGTATCCAGGAGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAASHGFF*YPGGKI
Trigger: GATTTTGCCTCCTGGATATCAGAAAAATCCATGTGA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAACTCAGTTTCTGTAGATaGGAAGTCTGGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQLSFCR*EVWTNL
Trigger: CAAATTTGTCCAGACTTCTCATCTACAGAAACTGAG...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCATTTCCTTGATACCTaGGGAGTTTACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSHFLDT*GVYTEE
Trigger: CTCCTCAGTGTAAACTCCGCAGGTATCAAGGAAATG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAAGGAGTGTCCGTGCTaGAAATGTCACTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQKECPC*KCHSRS
Trigger: GCTTCTGGAGTGACATTTGCAGCACGGACACTCCTT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TTGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCGAAGAATTCACTTTTTaGAGACATTATTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLCSLLRVHEAEKGVGWGEEFTF*RHYWQL
Trigger: AAGCTGCCAATAATGTCTGCAAAAAGTGAATTCTTC...GCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp CAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACGGTGTTGGCTGGGGCTaGTGCAGTCTCATTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QGPLPSSRSCWKNSLFADGVGWG*CSLILG
Trigger: ACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC...GTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCACATCTTTCTTCCGCTaGTCATTAAGGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAATSFFR*SLRLSK
Trigger: TTTACTCAGCCTTAATGACCAGCGGAAGAAAGATGT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCCTTCTCTAAGCACATaGACTCATATGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSPSLST*THMSDW
Trigger: CCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCCGTTGTGCATTGAATaGCAGTTTTACCTCACATTC +
Preference number: 4 (lower is better)
Translates to: CWLGLLQSHSRFKVLFQAPLCIE*QFYLTF
Trigger: GAATGTGAGGTAAAACTGCCATTCAATGCACAACGG...AGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp AGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTACTTCTTCGAATATCATaGATACAATCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RVHEAEKGVGWGCCSLILLLRIS*IQSSCS
Trigger: AGAACAGCTGGATTGTATCCATGATATTCGAAGAAG...TAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTTCATACACAGTGGGTaGTGGCTGCCCACATTAGCT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQFIHSG*WLPTLA
Trigger: AGCTAATGTGGGCAGCCACCACCCACTGTGTATGAA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CAA 72 bp ATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTaGTTCATACACAGTGGGTGGTGGCTGCCCACATTA +
Preference number: 4 (lower is better)
Translates to: IYSQGQGQLASD*FIHSGWWLPTL
Trigger: TAATGTGGGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCAGAGTTGACAAAATGTaGTCTCTTTCCTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAARVDKM*SLSFNK
Trigger: CTTGTTGAAGGAAAGAGATCACATTTTGTCAACTCT...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCAGAATTATTCTCCCTaGCAAATTCTTGAGTGTACT +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAQNYSP*QILECT
Trigger: AGTACACTCAAGAATTTGTCAGGGAGAATAATTCTG...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTTTCAAAATTCTGCATaGAGGAAAAGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAFQNSA*RKRHTL
Trigger: CAGTGTATGCCTTTTCCTTCATGCAGAATTTTGAAA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGGCGAACCAGGGTTGCTaGTTAAGTGACCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQANQGC*LSDHRP
Trigger: TGGCCTGTGGTCACTTAATCAGCAACCCTGGTTCGC...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGCATTCTTGCTGGTCTaGAGTGGAGTCCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTAFLLV*SGVQKL
Trigger: AAGTTTTTGGACTCCACTGCAGACCAGCAAGAATGC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGTCAAGTTTTCTCTTaGGACAGCGCTGTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQSQVFS*DSAVQQ
Trigger: TTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAGTCCAGTTAGGTTCTaGTTTGTCTCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTSPVRF*FVSPRV
Trigger: AACTCTGGGTGAGACAAAGCAGAACCTAACTGGACT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACACAGTCTCCACGATGGTaGATGGGATGTTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTQSPRW*MGCWRT
Trigger: GGTTCGCCAACATCCCATGCACCATCGTGGAGACTG...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CCA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTTCAGACCTTTCATTTaGCTGAACAGAAGCATGAAT +
Preference number: 4 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAFRPFI*LNRSMN
Trigger: ATTCATGCTTCTGTTCAGCCAAATGAAAGGTCTGAA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCCTTTGACCTGGTTCTaGGCTCTCACTAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQPLTWF*ALTNPD
Trigger: ATCAGGATTAGTGAGAGCCCAGAACCAGGTCAAAGG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGAAAGTCCTTTGACCTaGTTCTGGGCTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTESPLT*FWALTN
Trigger: ATTAGTGAGAGCCCAGAACCAGGTCAAAGGACTTTC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCACATTCTTGTTCTCTaGCTGAACAGGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSHILVL*LNRIHC
Trigger: ACAGTGAATCCTGTTCAGCCAGAGAACAAGAATGTG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCGCTGTGGACATCTGCTaGGACTCCTGCCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESAVDIC*DSCPRA
Trigger: CGCGCGAGGGCAGGAGTCCCAGCAGATGTCCACAGC...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCATCTAACCCCAGCATaGCTAAAAGCCACCGCAAAA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQHLTPA*LKATAK
Trigger: TTTTGCGGTGGCTTTTAGCCATGCTGGGGTTAGATG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCTTAATTACAACGCGTaGGCAAAACTCCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSLNYNA*AKLQQR
Trigger: CCTTTGTTGGAGTTTTGCCCACGCGTTGTAATTAAG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399921.5
CDS-3UTR CCA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTTTTGCAGACATTATTaGCAGCTTGTTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSFCRHY*QLVPSK
Trigger: TTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAA...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCCTCTGGTCCAAAAGTaGAAGTTTAAGGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSPLVQK*KFKVCF
Trigger: AAAACAGACCTTAAACTTTCACTTTTGGACCAGAGG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGATGGACTCATATGTCTaGCTGGCACTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQMDSYV*LALSCR
Trigger: TCTACAAGACAGTGCCAGTCAGACATATGAGTCCAT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCCAGAACTTAATGTTGTaGAAGTCCTTTGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSQNLML*KSFDLV
Trigger: AACCAGGTCAAAGGACTTTCACAACATTAAGTTCTG...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGGCCGGTCAGATAAACTaGAAATTGATGGTAACGCCA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQAGQIN*KLMVTP
Trigger: TGGCGTTACCATCAATTTTCAGTTTATCTGACCGGC...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCTTGCGACAGCGCTGTaGAGCAATTCTGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQLATAL*SNSVFT
Trigger: AGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGTCCAGTTAGGTTCTaGTTTGTCTCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQSPVRF*FVSPRV
Trigger: AACTCTGGGTGAGACAAAGCAGAACCTAACTGGACT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAGGCTTTCAAGACGCTaGCAAAACTTCAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTRLSRR*QNFRRK
Trigger: TTTTCTCCTGAAGTTTTGGCAGCGTCTTGAAAGCCT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCCTATTTCACAAACCTaGAGAGTTGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTPISQT*RVAADT
Trigger: TGTATCTGCAGCAACTCTGCAGGTTTGTGAAATAGG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGGGCAAGGCCAACTTaGTTCAGACTTGTTCATACA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQRARPT*FRLVHT
Trigger: TGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp GTTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCATCTGTTGGTCTGACATaGCCTGATAGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VQGPLPSSRSCWKNSLFASVGLT*PDRAQG
Trigger: GCCCTGTGCTCTATCAGGGCATGTCAGACCAACAGA...TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp GAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTGAAGAATTCACTTTTTaGAGACATTATTGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: EKGVGWGCCSLILGSRSSEEFTF*RHYWQL
Trigger: AAGCTGCCAATAATGTCTGCAAAAAGTGAATTCTTC...AGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCACAATCCAGCTGTTCTaGAGTAAGCTTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSTIQLF*SKLVHF
Trigger: AAAATGCACAAGCTTACTCCAGAACAGCTGGATTGT...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTCTTCTTCGAATATCATaGATACAATCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CWLGLLQSHSRFKVLFQALLRIS*IQSSCS
Trigger: AGAACAGCTGGATTGTATCCATGATATTCGAAGAAG...AGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCTGCAGCTGAGTACTTaGCGAGTATCTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTLQLST*RVSVFV
Trigger: AACAAATACAGATACTCGCCAAGTACTCAGCTGCAG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp GGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAATTTTGCAGACATTATTaGCAGCTTGTTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GCWLGLLQSHSRFKVLFQFCRHY*QLVPSK
Trigger: TTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAA...TTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CCA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGCTCCACGATGGTGCATaGGATGTTGGCAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQLHDGA*DVGSFS
Trigger: TGAGAAGCTGCCAACATCCCATGCACCATCGTGGAG...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCTGGCCTACGATTCTTaGGTGGAAGTAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHLAYDS*VEVTAA
Trigger: TGCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCCTCTGGTCCAAAAGTaGAAGTTTAAGGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTPLVQK*KFKVCF
Trigger: AAAACAGACCTTAAACTTTCACTTTTGGACCAGAGG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACTTCTTGTTCTCTGGCTaGACAGGATTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGPLPSSRSCWKNSLFADFLFSG*TGFTVS
Trigger: GGAGACAGTGAATCCTGTTCAGCCAGAGAACAAGAA...GTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGTCTCACCCAGAGTTaGCAAAATGTGATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQCLTQS*QNVISF
Trigger: GAAAGAGATCACATTTTGTCAACTCTGGGTGAGACA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCGAGATCCCACCACTCTaGCGACACTGTTCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESEIPPL*RHCSAG
Trigger: GCCTGCGGAACAGTGTCGTCAGAGTGGTGGGATCTC...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCAGGAGAAATCATGGTTaGCTTAAAGGAAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSRRNHG*LKGNSL
Trigger: AAGGGAATTTCCTTTAAGTCAACCATGATTTCTCCT...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAATTACTCCAAGACATaGAGACTGGTCCCCATATAC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQNYSKT*RLVPIY
Trigger: GTATATGGGGACCAGTCTTCATGTCTTGGAGTAATT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTTTCAAAATTCTGCATaGAGGAAAAGGCATACACTG +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSFQNSA*RKRHTL
Trigger: CAGTGTATGCCTTTTCCTTCATGCAGAATTTTGAAA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCGAAGTAACTGCTGCATaGCGCCAGCACGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESEVTAA*RQHGPV
Trigger: CACCGGTCCGTGCTGGCGGCATGCAGCAGTTACTTC...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTTTCTTGGGCATTCTTaGTGGTCTGCAGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHFLGHS*WSAVES
Trigger: GGACTCCACTGCAGACCAGCAAGAATGCCCAAGAAA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCATTTTAACATCACCTaGAAATCTCTACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQHFNIT*KSLHSG
Trigger: CCCGGAGTGTAGAGATTTGCAGGTGATGTTAAAATG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTACTCCTATCACTAGATaGAACACTACTATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTTPITR*NTTIFP
Trigger: AGGGAAGATAGTAGTGTTGCATCTAGTGATAGGAGT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTTCCAATTTCCAAATTaGTTGAACAGCCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSFQFPN*LNSLQY
Trigger: GTACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGCTGTCTGATATGCTaGAGTTTTCATTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTCCLIC*SFHSPT
Trigger: AGTAGGAGAATGAAAACTGCAGCATATCAGACAGCA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCAGTGTAATCACTCATaGCACTGTATTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQQCNHS*HCILSP
Trigger: AGGACTCAGAATACAGTGGCATGAGTGATTACACTG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCCTATTTCACAAACCTaGAGAGTTGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQPISQT*RVAADT
Trigger: TGTATCTGCAGCAACTCTGCAGGTTTGTGAAATAGG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCACCGCAAAATGTTATaGGATAGGTGCTCAGTTATC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQHRKML*DRCSVI
Trigger: GATAACTGAGCACCTATCGCATAACATTTTGCGGTG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGGAATTTTCTGTATTTaGGGCATAAAGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTGIFCI*GIKKAR
Trigger: CCTTGCCTTCTTTATGCCCCAAATACAGAAAATTCC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCCGTTGTGCATTGAATaGCAGTTTTACCTCACATTC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQPLCIE*QFYLTF
Trigger: GAATGTGAGGTAAAACTGCCATTCAATGCACAACGG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTTCTTGTTCTCTGGCTaGACAGGATTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHFLFSG*TGFTVS
Trigger: GGAGACAGTGAATCCTGTTCAGCCAGAGAACAAGAA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCCTCCCCCTACACCCTaGTCAAAAAGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHPPPTP*SKRVTF
Trigger: AAATGTTACCCTTTTTGATCAGGGTGTAGGGGGAGG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAGTGGAAGTAACTGCTaGATGCCGCCAGCACGGACC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESSGSNC*MPPART
Trigger: GGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTTCTTGACTCAGAGCTaGTTCTTTACAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTFLTQS*FFTNFL
Trigger: CAGAAAGTTTGTAAAGAAGCAGCTCTGAGTCAAGAA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp GTTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCACTCTTCACTCTGATTTaGCCCTCTGTTGGTCTGACA +
Preference number: 4 (lower is better)
Translates to: VQGPLPSSRSCWKNSLFALFTLI*PSVGLT
Trigger: TGTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAG...TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACACTCTTCACTCTGATTTaGCCCTCTGTTGGTCTGACA +
Preference number: 4 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTLFTLI*PSVGLT
Trigger: TGTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAG...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR GCA 90 bp ATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCTCCCGTTGGCTGGGGCTGCTaGAGTCTCATTCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: IHFLQTLLAACSFKNVSPVGWGC*SLILGS
Trigger: TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAAC...GGGAGAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGACATCTTTCTTCCGCTaGTCATTAAGGCTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQTSFFR*SLRLSK
Trigger: TTTACTCAGCCTTAATGACCAGCGGAAGAAAGATGT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCACTACTATCTTCCCTaGTGCCCAAGTCGGATTTCA +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHHYYLP*CPSRIS
Trigger: TGAAATCCGACTTGGGCACCAGGGAAGATAGTAGTG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGTTCTGAGCCATCTTTaGCCACAGCAGGTGATAACT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHVLSHL*PQQVIT
Trigger: AGTTATCACCTGCTGTGGCCAAAGATGGCTCAGAAC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACACCTTTGACCTGGTTCTaGGCTCTCACTAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTPLTWF*ALTNPD
Trigger: ATCAGGATTAGTGAGAGCCCAGAACCAGGTCAAAGG...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCGCTCAGAGGTGGCTGTaGACATCTGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESAQRWL*TSAGTP
Trigger: AGGAGTCCCAGCAGATGTCCACAGCCACCTCTGAGC...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGATACCACACCAAATTTaGAGAAGAGAGCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQIPHQI*RREQGF
Trigger: GAATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTAT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCAAACTTTCCCACTTATaGCCAAAAGACAAACGTAAA +
Preference number: 4 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSKLSHL*PKDKRK
Trigger: TTTACGTTTGTCTTTTGGCCATAAGTGGGAAAGTTT...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGATCATTTCGAGACAGTaGAATTATCCGTTGTGCATT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQIISRQ*NYPLCI
Trigger: AATGCACAACGGATAATTTCACTGTCTCGAAATGAT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGCCGGTCAGATAAACTaGAAATTGATGGTAACGCCA +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHAGQIN*KLMVTP
Trigger: TGGCGTTACCATCAATTTTCAGTTTATCTGACCGGC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGGAGAAATCATGGTTaGCTTAAAGGAAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQRRNHG*LKGNSL
Trigger: AAGGGAATTTCCTTTAAGTCAACCATGATTTCTCCT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCCCACGGTGGAAAAATaGACAGCTTTACATGTTGGT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHPTVEK*TALHVG
Trigger: ACCAACATGTAAAGCTGTTCATTTTTCCACCGTGGG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACAACATTCTTTCCCCGTaGTGTCTGGTTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHNILSP*CLVFWH
Trigger: ATGCCAGAAAACCAGACATCACGGGGAAAGAATGTT...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCAGAATTATTCTCCCTaGCAAATTCTTGAGTGTACT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQQNYSP*QILECT
Trigger: AGTACACTCAAGAATTTGTCAGGGAGAATAATTCTG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTGAGTGGAAGTAACTaGTGCATGCCGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESLSGSN*CMPPAR
Trigger: CCGTGCTGGCGGCATGCAGCAGTTACTTCCACTCAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAACACTGTTGTGTTTTaGATACCAGCAAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTNTVVF*IPAKFK
Trigger: CTTGAATTTTGCTGGTATGCAAAACACAACAGTGTT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTACTATCTTCCCTGGTaGCCAAGTCGGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHYYLPW*PSRISK
Trigger: CTTTGAAATCCGACTTGGGCACCAGGGAAGATAGTA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCTCTCCTTTTCACTTTaGAGCTTCTCAATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQLSFSL*SFSISD
Trigger: ATCAGAAATTGAGAAGCTGCAAAGTGAAAAGGAGAG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTATTAAAACTGGGTTCTaGCAATGTTTCTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTIKTGF*QCFCEC
Trigger: ACATTCACAGAAACATTGGCAGAACCCAGTTTTAAT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATAGCTCTCCATCAGCCTaGCCTACGATTCTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNSSPSA*PTILEW
Trigger: CCACTCAAGAATCGTAGGCCAGGCTGATGGAGAGCT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCCTTCTCTAAGCACATaGACTCATATGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHPSLST*THMSDW
Trigger: CCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGAAAGTCCTTTGACCTaGTTCTGGGCTCTCACTAAT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHESPLT*FWALTN
Trigger: ATTAGTGAGAGCCCAGAACCAGGTCAAAGGACTTTC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCTTCTTCGAATATCATaGATACAATCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PHILSRARPTCFRLVHTQLLRIS*IQSSCS
Trigger: AGAACAGCTGGATTGTATCCATGATATTCGAAGAAG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCCAAGACATGAAGACTaGTCCCCATATACTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHPRHED*SPYTLK
Trigger: CTTGAGAGTATATGGGGACCAGTCTTCATGTCTTGG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTAAACTTTCCCACTTATaGCCAAAAGACAAACGTAAA +
Preference number: 4 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTKLSHL*PKDKRK
Trigger: TTTACGTTTGTCTTTTGGCCATAAGTGGGAAAGTTT...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AAGAATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCGAGAAGGGTGTTGGCTaGGGCTGCTGCAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: KNSLFADIIGSLFLQKCLEKGVG*GCCSLI
Trigger: AATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC...GAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCCTCCACAAAGATGGTaGCATCGCACAGCACATCTT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNPPQRW*HRTAHL
Trigger: AAGATGTGCTGTGCGATGTCACCATCTTTGTGGAGG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACCAGAACTTAATGTTGTaGAAGTCCTTTGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: QGPLPSSRSCWKNSLFADQNLML*KSFDLV
Trigger: AACCAGGTCAAAGGACTTTCACAACATTAAGTTCTG...GTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTGGGCAATCTGCAGCTaGGTACTTGGCGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESWAICS*VLGEYL
Trigger: CAGATACTCGCCAAGTACTCAGCTGCAGATTGCCCA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCTGCTGACAGAAATCTaGGATCCCACCACTCTGACG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESLLTEI*DPTTLT
Trigger: CGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACAATATTCCCAGTAGCTaGCACCCTGCTTCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHNIPSS*HPASKN
Trigger: ATTCTTAGAAGCAGGGTGTCAGCTACTGGGAATATT...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCATTTTAACATCACCTaGAAATCTCTACACTCCGGG +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHHFNIT*KSLHSG
Trigger: CCCGGAGTGTAGAGATTTGCAGGTGATGTTAAAATG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCTGCAGCTGAGTACTTaGCGAGTATCTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHLQLST*RVSVFV
Trigger: AACAAATACAGATACTCGCCAAGTACTCAGCTGCAG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTTCATACACAGTGGGTaGTGGCTGCCCACATTAGCT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNFIHSG*WLPTLA
Trigger: AGCTAATGTGGGCAGCCACCACCCACTGTGTATGAA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCTTGTTCATACACAGTaGGTGGTGGCTGCCCACATT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNLVHTQ*VVAAHI
Trigger: AATGTGGGCAGCCACCACCCACTGTGTATGAACAAG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
3UTR CAA 72 bp ACACACACACACACACACACACACACACAAATTCTTTaGCAGTATGGGATGCACTATCAGAATTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTQIL*QYGMHYQNYSP
Trigger: GGGAGAATAATTCTGATAGTGCATCCCATACTGCAAAAGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAGCTTTTGCATTTCCTTaGTACCTGCGGAGTTTACAC +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVAFAFP*YLRSLH
Trigger: GTGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGC...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTCACATGGATTTTTCTaGTATCCAGGAGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHSHGFF*YPGGKI
Trigger: GATTTTGCCTCCTGGATATCAGAAAAATCCATGTGA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACCCACGGTGGAAAAATaGACAGCTTTACATGTTGGT +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVPTVEK*TALHVG
Trigger: ACCAACATGTAAAGCTGTTCATTTTTCCACCGTGGG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTCTTGGGCATTCTTaGTGGTCTGCAGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFLGHS*WSAVES
Trigger: GGACTCCACTGCAGACCAGCAAGAATGCCCAAGAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATACAGCAGGTGATAACTaGATTTGGCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNTAGDN*IWQGVS
Trigger: GGACACTCCTTGCCAAATGCAGTTATCACCTGCTGT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCACTACTATCTTCCCTaGTGCCCAAGTCGGATTTCA +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNHYYLP*CPSRIS
Trigger: TGAAATCCGACTTGGGCACCAGGGAAGATAGTAGTG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp GTTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAACAATCCAGCTGTTCTaGAGTAAGCTTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: VQGPLPSSRSCWKNSLFATIQLF*SKLVHF
Trigger: AAAATGCACAAGCTTACTCCAGAACAGCTGGATTGT...TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACAATCATTTCGAGACAGTaGAATTATCCGTTGTGCATT +
Preference number: 4 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTIISRQ*NYPLCI
Trigger: AATGCACAACGGATAATTTCACTGTCTCGAAATGAT...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGATCATTTCGAGACAGTaGAATTATCCGTTGTGCATT +
Preference number: 4 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQIISRQ*NYPLCI
Trigger: AATGCACAACGGATAATTTCACTGTCTCGAAATGAT...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR TCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATGTCTCACCCAGAGTTaGCAAAATGTGATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVCLTQS*QNVISF
Trigger: GAAAGAGATCACATTTTGTCAACTCTGGGTGAGACA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCCTCCCCCTACACCCTaGTCAAAAAGGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESPPPTP*SKRVTF
Trigger: AAATGTTACCCTTTTTGATCAGGGTGTAGGGGGAGG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCCCAAGTTGTTAATGTaGCTGAGTGTCCACATGCAA +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNPKLLM*LSVHMQ
Trigger: TTGCATGTGGACACTCAGTCACATTAACAACTTGGG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACACTCAGAGACATTCTaGATAACAAATGTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVHSETF*ITNVVG
Trigger: CCCGACAACATTTGTTATGCAGAATGTCTCTGAGTG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACAAAACTCCACACATTTaGACACTTCATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHKTPHI*TLHPHS
Trigger: AGAATGTGGATGAAGTGTGCAAATGTGTGGAGTTTT...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATGCATTCTTGCTGGTCTaGAGTGGAGTCCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNAFLLV*SGVQKL
Trigger: AAGTTTTTGGACTCCACTGCAGACCAGCAAGAATGC...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCACAGCAGGTGATAACTaGATTTGGCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESTAGDN*IWQGVS
Trigger: GGACACTCCTTGCCAAATGCAGTTATCACCTGCTGT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAGTCAAGTTTTCTCTTaGGACAGCGCTGTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESSQVFS*DSAVQQ
Trigger: TTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACGTTTCTAGATCCCTCTaGTCCAAAAGTGAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHVSRSL*SKSESL
Trigger: TAAACTTTCACTTTTGGACCAGAGGGATCTAGAAAC...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATACTCATATGTCTGACTaGCACTGTCTTGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNTHMSD*HCLVEE
Trigger: CTCCTCTACAAGACAGTGCCAGTCAGACATATGAGT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCCTTTGACCTGGTTCTaGGCTCTCACTAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESPLTWF*ALTNPD
Trigger: ATCAGGATTAGTGAGAGCCCAGAACCAGGTCAAAGG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AGAATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCTAATGACACAAGCATATaGGCAAGGTTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RIHFLQTLLAACSFKNVSNDTSI*ARFLLG
Trigger: CCCCAGCAAGAACCTTGCCCATATGCTTGTGTCATT...AGAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR CCA 90 bp CCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACATTATTCACATTCTTGTTCTCTaGCTGAACAGGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: PLPSSRSCWKNSLFADIIHILVL*LNRIHC
Trigger: ACAGTGAATCCTGTTCAGCCAGAGAACAAGAATGTG...AATAATGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR CCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACCGTTGTGCATTGAATaGCAGTTTTACCTCACATTC +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVPLCIE*QFYLTF
Trigger: GAATGTGAGGTAAAACTGCCATTCAATGCACAACGG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTCTTTACAAACTTTCTaGCAAAGTCCAGTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHSLQTF*QSPVRF
Trigger: GAACCTAACTGGACTTTGCCAGAAAGTTTGTAAAGA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCCAAGACATGAAGACTaGTCCCCATATACTCTCAAG +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNPRHED*SPYTLK
Trigger: CTTGAGAGTATATGGGGACCAGTCTTCATGTCTTGG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTTCAGTTGGGCACTaGGAAGCAGGATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFSVGH*EAGSFF
Trigger: GAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCATTTCCTTGATACCTaGGGAGTTTACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESHFLDT*GVYTEE
Trigger: CTCCTCAGTGTAAACTCCGCAGGTATCAAGGAAATG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTACTATCTTCCCTGGTaGCCAAGTCGGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESYYLPW*PSRISK
Trigger: CTTTGAAATCCGACTTGGGCACCAGGGAAGATAGTA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAACTCCTATCACTAGATaGAACACTACTATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVTPITR*NTTIFP
Trigger: AGGGAAGATAGTAGTGTTGCATCTAGTGATAGGAGT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCTTGCGACAGCGCTGTaGAGCAATTCTGTTTTTACT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESLATAL*SNSVFT
Trigger: AGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACTTTTGCAGTATGGGATaGACTATCAGAATTATTCTC +
Preference number: 4 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHFCSMG*TIRIIL
Trigger: GAGAATAATTCTGATAGTGCATCCCATACTGCAAAA...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCACATTCTTGTTCTCTaGCTGAACAGGATTCACTGT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNHILVL*LNRIHC
Trigger: ACAGTGAATCCTGTTCAGCCAGAGAACAAGAATGTG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATGATACAACCAATAGTTaGGTGTACACTGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNDTTNS*VYTEVG
Trigger: TCCTACCTCAGTGTACACCCAACTATTGGTTGTATC...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCAGAACTTAATGTTGTaGAAGTCCTTTGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNQNLML*KSFDLV
Trigger: AACCAGGTCAAAGGACTTTCACAACATTAAGTTCTG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTCTTGCTGGGGTTCTaGAACATAATCATCGTTTCC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFLLGF*NIIIVS
Trigger: GGAAACGATGATTATGTTTCAGAACCCCAGCAAGAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATCCATAGCTTTCATTTaGCTCTCAAACACATCTAAC +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVSIAFI*LSNTSN
Trigger: GTTAGATGTGTTTGAGAGTCAAATGAAAGCTATGGA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAATTACTCCAAGACATaGAGACTGGTCCCCATATAC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESNYSKT*RLVPIY
Trigger: GTATATGGGGACCAGTCTTCATGTCTTGGAGTAATT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATTCAAGCTGTTAAATTaGTGTCTGATATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVFKLLN*CLICCS
Trigger: ACTGCAGCATATCAGACAGCAATTTAACAGCTTGAA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATGGAATTTTCTGTATTTaGGGCATAAAGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNGIFCI*GIKKAR
Trigger: CCTTGCCTTCTTTATGCCCCAAATACAGAAAATTCC...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATTCAGACCTTTCATTTaGCTGAACAGAAGCATGAAT +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVFRPFI*LNRSMN
Trigger: ATTCATGCTTCTGTTCAGCCAAATGAAAGGTCTGAA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATACAATCCAGCTGTTCTaGAGTAAGCTTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNTIQLF*SKLVHF
Trigger: AAAATGCACAAGCTTACTCCAGAACAGCTGGATTGT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCATTGGTGACCCACGGTaGAAAAATGAACAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESIGDPR*KNEQLY
Trigger: GTAAAGCTGTTCATTTTTCCACCGTGGGTCACCAAT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATATACCACACCAAATTTaGAGAAGAGAGCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNIPHQI*RREQGF
Trigger: GAATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTAT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATATCATTTCGAGACAGTaGAATTATCCGTTGTGCATT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNIISRQ*NYPLCI
Trigger: AATGCACAACGGATAATTTCACTGTCTCGAAATGAT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATAGAGTTGACAAAATGTaGTCTCTTTCCTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNRVDKM*SLSFNK
Trigger: CTTGTTGAAGGAAAGAGATCACATTTTGTCAACTCT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATATCTGTATTTGTTCTTaGCTCAGAGCTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNICICS*LRAASL
Trigger: TAAAGAAGCAGCTCTGAGTCAAGAACAAATACAGAT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAAACACTGTTGTGTTTTaGATACCAGCAAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVNTVVF*IPAKFK
Trigger: CTTGAATTTTGCTGGTATGCAAAACACAACAGTGTT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCTTCTTCGAATATCATaGATACAATCCAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNLLRIS*IQSSCS
Trigger: AGAACAGCTGGATTGTATCCATGATATTCGAAGAAG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTCTTTACAAACTTTCTaGCAAAGTCCAGTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNSLQTF*QSPVRF
Trigger: GAACCTAACTGGACTTTGCCAGAAAGTTTGTAAAGA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR TCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTCCATAGCTTTCATTTaGCTCTCAAACACATCTAAC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESSIAFI*LSNTSN
Trigger: GTTAGATGTGTTTGAGAGTCAAATGAAAGCTATGGA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAAAACTCCACACATTTaGACACTTCATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESKTPHI*TLHPHS
Trigger: AGAATGTGGATGAAGTGTGCAAATGTGTGGAGTTTT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTCCAATTTCCAAATTaGTTGAACAGCCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFQFPN*LNSLQY
Trigger: GTACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTCTTGACTCAGAGCTaGTTCTTTACAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFLTQS*FFTNFL
Trigger: CAGAAAGTTTGTAAAGAAGCAGCTCTGAGTCAAGAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CCA 90 bp AAGAATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCAGCTCACGTAGTTGTTaGAAGAATTCACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: KNSLFADIIGSLFLQKCLSSRSC*KNSLFA
Trigger: TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCT...GAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAATTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCATTAAAACTGGGTTCTaGCAATGTTTCTGTGAATGT +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESIKTGF*QCFCEC
Trigger: ACATTCACAGAAACATTGGCAGAACCCAGTTTTAAT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR GCA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTTGCAGTATGGGATaGACTATCAGAATTATTCTC +
Preference number: 4 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFCSMG*TIRIIL
Trigger: GAGAATAATTCTGATAGTGCATCCCATACTGCAAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CCA 90 bp CACCACTCTGACGACACTGTTCCGCAGGCCCAGCTTGCTCAGAGGTaGCTGTGGACATCTGCTGGGACTCCTGCCCTCGCGCGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: HHSDDTVPQAQLAQR*LWTSAGTPALARSQ
Trigger: CTGGCTACGCGCGAGGGCAGGAGTCCCAGCAGATGTCCACAGCCACCTCTGAGCAAGCTGGGCCTGCGGAACAGTGTCGTCAGAGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS GCA 90 bp GCTCTCCATCAGCCTGGCCTACGATTCTTGAGTGGAAGTAACTGCTaGATGCCGCCAGCACGGACCGGTGAGCGCGGAACCGCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ALHQPGLRFLSGSNC*MPPARTGERGTAVP
Trigger: AGGGACAGCGGTTCCGCGCTCACCGGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGGCTGATGGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
CDS GCA 90 bp TCAGCTCTCCATCAGCCTGGCCTACGATTCTTGAGTGGAAGTAACTaGTGCATGCCGCCAGCACGGACCGGTGAGCGCGGAACCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SALHQPGLRFLSGSN*CMPPARTGERGTAV
Trigger: GACAGCGGTTCCGCGCTCACCGGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGGCTGATGGAGAGCTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
CDS-3UTR CAA 90 bp TGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCCCTCTTCACTCTGATTaGCCCCTCTGTTGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: CSLLRVHEAEKGVGWGCCPLHSD*PLCWSD
Trigger: GTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAGG...GCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS GCA 90 bp TCTGGCTTCCTCTTCACTCTGATTTGCCCCTCTGTTGGTCTGACATaGCCTGATAGAGCACAGGGCATCCAGCCAGTCTCCACGATGGTG +
Preference number: 5 (lower is better)
Translates to: SGFLFTLICPSVGLT*PDRAQGIQPVSTMV
Trigger: CACCATCGTGGAGACTGGCTGGATGCCCTGTGCTCTATCAGGGCATGTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAGGAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422809.5
ENST00000462262.1
ENST00000468059.1
CDS-3UTR CAA 90 bp GAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTCAGTCAAGTTTTCTCTaGCGACAGCGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: EKGVGWGCCSLILGSRSSQSSFL*RQRCAA
Trigger: TGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTG...AGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCACAGTCAAGTTTTCTCTaGCGACAGCGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSQSSFL*RQRCAA
Trigger: TGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTG...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCACCTCTTCACTCTGATTaGCCCCTCTGTTGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSPLHSD*PLCWSD
Trigger: GTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAGG...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCACTCCAGAAGCCTTTaGCTAGGTGTTCTGCCACTT +
Preference number: 5 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAHSRSL*LGVLPL
Trigger: AAGTGGCAGAACACCTAGCAAAAGGCTTCTGGAGTG...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TGCTGTGTTCTCTGCTCAGGGTCCACGAAGCTGAGAAGGGTGTTGGCTGGGGCTTGTTCTGGAGTAAGCTaGTGCATTTTCAACAAGGAC +
Preference number: 5 (lower is better)
Translates to: CCVLCSGSTKLRRVLAGACSGVS*CIFNKD
Trigger: GTCCTTGTTGAAAATGCACAAGCTTACTCCAGAACA...AGCCCCAGCCAACACCCTTCTCAGCTTCGTGGACCCTGAGCAGAGAACACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCGGCGAGTATCTGTATTaGTTCTTGACTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAGEYLY*FLTQSC
Trigger: GCAGCTCTGAGTCAAGAACAAATACAGATACTCGCC...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp GGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGGAAGTCTGGACAAATTaGCTGTGTTCTCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GVGWGCCSLILGSRSSSKEVWTN*LCSLLR
Trigger: CCTGAGCAGAGAACACAGCAAATTTGTCCAGACTTC...CTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS CCA 90 bp GGCATAAAGAAGGCAAGGCCAGAGCAGCATCCTTCTCTAAGCACATaGACTCATATGTCTGACTGGCACTGTCTTGTAGAGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GIKKARPEQHPSLST*THMSDWHCLVEEVR
Trigger: CCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGGATGCTGCTCTGGCCTTGCCTTCTTTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000451655.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCGAGGAGGTGAGGCTTTaGCATTTCCTTGATACCTGC +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSEEVRL*HFLDTC
Trigger: GCAGGTATCAAGGAAATGCAAAAGCCTCACCTCCTC...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTGTTGTGAAAGTCCTTaGACCTGGTTCTGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSCCESP*TWFWAL
Trigger: GAGAGCCCAGAACCAGGTCAAAGGACTTTCACAACA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCAGTCAAGTTTTCTCTaGCGACAGCGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTQSSFL*RQRCAA
Trigger: TGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTCTGGTTTTCTGGCATaGGTGACCCACGGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSSGFLA*VTHGGK
Trigger: TTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 90 bp CTCTGGCACAGGGAGGCAGCACTGCTGGAGGCCGGTCAGATAAACTaGAAATTGATGGTAACGCCAGTTCACCATCAGGAGTACTTTTAT +
Preference number: 5 (lower is better)
Translates to: LWHREAALLEAGQIN*KLMVTPVHHQEYFY
Trigger: ATAAAAGTACTCCTGATGGTGAACTGGCGTTACCATCAATTTTCAGTTTATCTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CCA 90 bp CAACAGTTCAGGATGGCTGGAGAGGCCTCAGGAAACTTACAATCATaGCAGAAGGTGAAAGGGAAGCAAGGCACTTCTTCACAAGATGGC +
Preference number: 5 (lower is better)
Translates to: QQFRMAGEASGNLQS*QKVKGKQGTSSQDG
Trigger: GCCATCTTGTGAAGAAGTGCCTTGCTTCCCTTTCACCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCTCCAGCCATCCTGAACTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550131.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGAGGAGGTGAGGCTTTaGCATTTCCTTGATACCTGC +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTEEVRL*HFLDTC
Trigger: GCAGGTATCAAGGAAATGCAAAAGCCTCACCTCCTC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCTGAGCCATCTTaGGCCACAGCAGGTGATAAC +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTCSEPS*ATAGDN
Trigger: GTTATCACCTGCTGTGGCCAAAGATGGCTCAGAACA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCCAATTTCCAAATTGCTaGAACAGCCTTCAGTACTCA +
Preference number: 5 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSQFPNC*NSLQYS
Trigger: TGAGTACTGAAGGCTGTTCAAGCAATTTGGAAATTG...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCGGCGAGTATCTGTATTaGTTCTTGACTCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSGEYLY*FLTQSC
Trigger: GCAGCTCTGAGTCAAGAACAAATACAGATACTCGCC...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 90 bp AAGGCCAGAGCAGCATCCTTCTCTAAGCACATGGACTCATATGTCTaGCTGGCACTGTCTTGTAGAGGAGGTGAGGCTTTTGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: KARAASFSKHMDSYV*LALSCRGGEAFAFP
Trigger: AGGAAATGCAAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGGATGCTGCTCTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000447177.5
ENST00000451655.5
CDS CCA 90 bp TCTAATTATCATCAACCATATTGTGCGAGGCTTAATTACAACGCGTaGGCAAAACTCCAACAAAGGGAGTCCTGGGCTCTCCGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SNYHQPYCARLNYNA*AKLQQRESWALRSP
Trigger: TGGGGACCGGAGAGCCCAGGACTCCCTTTGTTGGAGTTTTGCCCACGCGTTGTAATTAAGCCTCGCACAATATGGTTGATGATAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTTTTCTTGGGCATTCTaGCTGGTCTGCAGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQFSWAF*LVCSGV
Trigger: GACTCCACTGCAGACCAGCAAGAATGCCCAAGAAAA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTCTGCAGCTGAGTACTaGGCGAGTATCTGTATTTGT +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSSAAEY*ASICIC
Trigger: ACAAATACAGATACTCGCCAAGTACTCAGCTGCAGA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp GCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTTTTTGCAGACATTATaGGCAGCTTGTTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: AEKGVGWGCCSLILGSRSFLQTL*AACSFK
Trigger: TTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAA...GGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp CACGAAGCTGAGAAGGGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAGGAAGAATTCACTTTTaGCAGACATTATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: HEAEKGVGWGCCSLILGSGRIHF*QTLLAA
Trigger: AGCTGCCAATAATGTCTGCAAAAAGTGAATTCTTCC...TGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACCCTTCTCAGCTTCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp GGTGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGGGAAGAATTCACTTTTaGCAGACATTATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GVGWGCCSLILGSRSSSKGRIHF*QTLLAA
Trigger: AGCTGCCAATAATGTCTGCAAAAAGTGAATTCTTCC...CTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS CCA 90 bp CCAGAGCAGCATCCTTCTCTAAGCACATGGACTCATATGTCTGACTaGCACTGTCTTGTAGAGGAGGTGAGGCTTTTGCATTTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: PEQHPSLSTWTHMSD*HCLVEEVRLLHFLD
Trigger: ATCAAGGAAATGCAAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGGATGCTGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000447177.5
ENST00000451655.5
CDS-3UTR CAA 90 bp TGTTGGCTGGGGCTGCTGCAGTCTCATTCTAGGTTCAAGGTCCTCTTCCAAGCTATTATCCGTTGTGCATaGAATGGCAGTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: CWLGLLQSHSRFKVLFQAIIRCA*NGSFTS
Trigger: TGAGGTAAAACTGCCATTCAATGCACAACGGATAAT...AGCTTGGAAGAGGACCTTGAACCTAGAATGAGACTGCAGCAGCCCCAGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTGTTCTGGAGTAAGCTaGTGCATTTTCAACAAGGAC +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSCSGVS*CIFNKD
Trigger: GTCCTTGTTGAAAATGCACAAGCTTACTCCAGAACA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCAGTTAGGTTCTGCTTaGTCTCACCCAGAGTTGACA +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQQLGSA*SHPELT
Trigger: TGTCAACTCTGGGTGAGACAAAGCAGAACCTAACTG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCTATCTGTATTTGTTCTaGACTCAGAGCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RARPTCFRLVHTQWVVAAYLYLF*TQSCFF
Trigger: AAAGAAGCAGCTCTGAGTCAAGAACAAATACAGATA...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp AGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGGTGGTGGCTGCCCTCCCTGACAAATTCTaGAGTGTACTTATAAAAGCT +
Preference number: 5 (lower is better)
Translates to: RARPTCFRLVHTQWVVAALPDKF*SVLIKA
Trigger: AGCTTTTATAAGTACACTCAAGAATTTGTCAGGGAG...GGCAGCCACCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCCTGGCCTACGATTCTaGAGTGGAAGTAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHPGLRF*SGSNCC
Trigger: GCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTTTCAGACCTTTCATTaGGCTGAACAGAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSFQTFH*AEQKHE
Trigger: TTCATGCTTCTGTTCAGCCAAATGAAAGGTCTGAAA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTGAACAGCTTTACATGTaGGTAAGCTCTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTEQLYM*VSSPDS
Trigger: AGAATCTGGAGAGCTTACCAACATGTAAAGCTGTTC...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 90 bp TCCATGAGGGTCTATGGAAGAATTGTGGGGGAAAGGAGTCACTTCTaGTTTTTCAGTTGGGCACTGAGAAGCAGGATCTTTCTTCGTTTC +
Preference number: 5 (lower is better)
Translates to: SMRVYGRIVGERSHF*FFSWALRSRIFLRF
Trigger: GAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAGTGACTCCTTTCCCCCACAATTCTTCCATAGACCCTCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CCA 90 bp AAAACCAAGGCTGCTGGCGAAGTGTCTAAACACTTGTATAAAGTGTaGAAGAAGGTTTGTACTCTGACAACAACTGCAGGAAACCTGGGG +
Preference number: 5 (lower is better)
Translates to: KTKAAGEVSKHLYKV*KKVCTLTTTAGNLG
Trigger: CCCCAGGTTTCCTGCAGTTGTTGTCAGAGTACAAACCTTCTTCCACACTTTATACAAGTGTTTAGACACTTCGCCAGCAGCCTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGAGGCTGAGTAAAACATaGGTGCTATGCACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQRLSKT*VLCTED
Trigger: ATCTTCTGTGCATAGCACCAATGTTTTACTCAGCCT...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCGTGATGTCTGGTTTTCTGGCATTGGTGACCCACGGTGGAAAAATGAACAGCTTTCTGTTAACACTGTaGTGTTTTGCATACCAGCAA +
Preference number: 5 (lower is better)
Translates to: PVMSGFLALVTHGGKMNSFLLTL*CFAYQQ
Trigger: TTGCTGGTATGCAAAACACAACAGTGTTAACAGAAA...GCTGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGTGTTGTGAAAGTCCTTaGACCTGGTTCTGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQCCESP*TWFWAL
Trigger: GAGAGCCCAGAACCAGGTCAAAGGACTTTCACAACA...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTCAATTTCCAAATTGCTaGAACAGCCTTCAGTACTCA +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTQFPNC*NSLQYS
Trigger: TGAGTACTGAAGGCTGTTCAAGCAATTTGGAAATTG...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGTTCTGGAGTAAGCTaGTGCATTTTCAACAAGGAC +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQCSGVS*CIFNKD
Trigger: GTCCTTGTTGAAAATGCACAAGCTTACTCCAGAACA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGGAACAGCTTTACATGTaGGTAAGCTCTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQEQLYM*VSSPDS
Trigger: AGAATCTGGAGAGCTTACCAACATGTAAAGCTGTTC...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTTAGTTCAGGTACATTaGGGTAAGAACATTAGGGAG +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTLVQVH*GKNIRE
Trigger: CTCCCTAATGTTCTTACCCAAATGTACCTGAACTAA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTGGAATTTTCTGTATTaGGGGCATAAAGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQWNFLY*GHKEGK
Trigger: CTTGCCTTCTTTATGCCCCAAATACAGAAAATTCCA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CATGAAGACTGGTCCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTTTCTGTTAACACTGTaGTGTTTTGCATACCAGCAA +
Preference number: 5 (lower is better)
Translates to: HEDWSPYTLKGKANLLQTFLLTL*CFAYQQ
Trigger: TTGCTGGTATGCAAAACACAACAGTGTTAACAGAAA...AGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGCAATTTCCAAATTGCTaGAACAGCCTTCAGTACTCA +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQQFPNC*NSLQYS
Trigger: TGAGTACTGAAGGCTGTTCAAGCAATTTGGAAATTG...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACAGTCAAGTTTTCTCTaGCGACAGCGCTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVQSSFL*RQRCAA
Trigger: TGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCCCATATACTCTCAAGGGCAAGGCCAACTTGCTTCAGACTTGTTCATACACAGTTAGTTCAGGTACATTaGGGTAAGAACATTAGGGAG +
Preference number: 5 (lower is better)
Translates to: PHILSRARPTCFRLVHTQLVQVH*GKNIRE
Trigger: CTCCCTAATGTTCTTACCCAAATGTACCTGAACTAA...CTGTGTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp GTTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGAAGTCTGGACAAATTaGCTGTGTTCTCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VQGPLPSSRSCWKNSLFAEVWTN*LCSLLR
Trigger: CCTGAGCAGAGAACACAGCAAATTTGTCCAGACTTC...TGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACAATGGTGCATGGGATGTaGGCAGCTTCTCAATTTCTG +
Preference number: 5 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTMVHGM*AASQFL
Trigger: CAGAAATTGAGAAGCTGCCAACATCCCATGCACCAT...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS TCA 90 bp GAATTGTGGGGGAAAGGAGTCACTTCTGATTTTTCAGTTGGGCACTaGGAAGCAGGATCTTTCTTCGTTTCTTCAGGTTCCATTGCTAAT +
Preference number: 5 (lower is better)
Translates to: ELWGKGVTSDFSVGH*EAGSFFVSSGSIAN
Trigger: ATTAGCAATGGAACCTGAAGAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAGTGACTCCTTTCCCCCACAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 90 bp TGCATGGGATGTTGGCACCAGGTAACTTCTGTGAGACCCAAGTCTTaGTTCGTCTCTTTGCTGTACCTATTGTCAGGCTTTATATTGAAT +
Preference number: 5 (lower is better)
Translates to: CMGCWHQVTSVRPKS*FVSLLYLLSGFILN
Trigger: ATTCAATATAAAGCCTGACAATAGGTACAGCAAAGAGACGAATCAAGACTTGGGTCTCACAGAAGTTACCTGGTGCCAACATCCCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATCCTGGCCTACGATTCTaGAGTGGAAGTAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNPGLRF*SGSNCC
Trigger: GCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGG...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS GCA 90 bp CAGAAGATTCATAGGCAAAAACCGAGTTCTCACTCAGAGACATTCTaGATAACAAATGTTGTCGGGAAGTTCAGTGGAAAGCATGCTTCT +
Preference number: 5 (lower is better)
Translates to: QKIHRQKPSSHSETF*ITNVVGKFSGKHAS
Trigger: AGAAGCATGCTTTCCACTGAACTTCCCGACAACATTTGTTATGCAGAATGTCTCTGAGTGAGAACTCGGTTTTTGCCTATGAATCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
ENST00000546469.5
ENST00000547141.5
ENST00000548219.5
ENST00000548467.1
ENST00000550131.5
CDS GCA 90 bp TCAGGTTCCATTGCTAATTTACTTTCGTCACATTTTAACATCACCTaGAAATCTCTACACTCCGGGACTCCTCCCAGGCATTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SGSIANLLSSHFNIT*KSLHSGTPPRHSFS
Trigger: TGAAAATGAATGCCTGGGAGGAGTCCCGGAGTGTAGAGATTTGCAGGTGATGTTAAAATGTGACGAAAGTAAATTAGCAATGGAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACAGGCTGAGTAAAACATaGGTGCTATGCACAGAAGAT +
Preference number: 5 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHRLSKT*VLCTED
Trigger: ATCTTCTGTGCATAGCACCAATGTTTTACTCAGCCT...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACAGTTAGGTTCTGCTTaGTCTCACCCAGAGTTGACA +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVQLGSA*SHPELT
Trigger: TGTCAACTCTGGGTGAGACAAAGCAGAACCTAACTG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACAACTTGCTTCAGACTaGTTCATACACAGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVQLASD*FIHSGW
Trigger: CCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAAAGGGCAAGGCCAACTaGCTTCAGACTTGTTCATAC +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVKGKAN*LQTCSY
Trigger: GTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAGGCTTTTGCATTTCCTaGATACCTGCGGAGTTTACA +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVGFCIS*IPAEFT
Trigger: TGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGCC...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACTTCTGATTTTTCAGTaGGGCACTGAGAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVLLIFQ*GTEKQD
Trigger: ATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCACTCCAGAAGCCTTTaGCTAGGTGTTCTGCCACTT +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESHSRSL*LGVLPL
Trigger: AAGTGGCAGAACACCTAGCAAAAGGCTTCTGGAGTG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTGTTCTGAGCCATCTTaGGCCACAGCAGGTGATAAC +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESCSEPS*ATAGDN
Trigger: GTTATCACCTGCTGTGGCCAAAGATGGCTCAGAACA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTGTTGTGAAAGTCCTTaGACCTGGTTCTGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESCCESP*TWFWAL
Trigger: GAGAGCCCAGAACCAGGTCAAAGGACTTTCACAACA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCACACACAAATTCTTTaGCAGTATGGGATGCACTAT +
Preference number: 5 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHHTQIL*QYGMHY
Trigger: ATAGTGCATCCCATACTGCAAAAGAATTTGTGTGTG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp AAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGACAGACATTATTGGCAGCTaGTTCCTTCAAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: KVLFQAHVVVGRIHFLQTDIIGS*FLQKCL
Trigger: GAGACATTTTTGAAGGAACAAGCTGCCAATAATGTC...TGTCTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATGGCTTTTGCATTTCCTaGATACCTGCGGAGTTTACA +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNGFCIS*IPAEFT
Trigger: TGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGCC...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGTTTCCAATTTCCAAATaGCTTGAACAGCCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQFPISK*LEQPSV
Trigger: TACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAAA...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTCTGCAGCTGAGTACTaGGCGAGTATCTGTATTTGT +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNSAAEY*ASICIC
Trigger: ACAAATACAGATACTCGCCAAGTACTCAGCTGCAGA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCAACTTGCTTCAGACTaGTTCATACACAGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESQLASD*FIHSGW
Trigger: CCACCCACTGTGTATGAACAAGTCTGAAGCAAGTTG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCAAGGGCAAGGCCAACTaGCTTCAGACTTGTTCATAC +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESKGKAN*LQTCSY
Trigger: GTATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTT...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CCAAATTTGGAGAAGAGAGCAAGGATTCAACCTGCTTTTCAAATGCAAACCCACCTCCCTGACAAATTCTaGAGTGTACTTATAAAAGCT +
Preference number: 5 (lower is better)
Translates to: PNLEKRARIQPAFQMQTHLPDKF*SVLIKA
Trigger: AGCTTTTATAAGTACACTCAAGAATTTGTCAGGGAG...GTGGGTTTGCATTTGAAAAGCAGGTTGAATCCTTGCTCTCTTCTCCAAATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TTCAAGGTCCTCTTCCAAGCTCACGTAGTTGTTGGAAGAATTCACTTTTTGCAGTTTTTGCAGACATTATaGGCAGCTTGTTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: FKVLFQAHVVVGRIHFLQFLQTL*AACSFK
Trigger: TTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAA...CTGCAAAAAGTGAATTCTTCCAACAACTACGTGAGCTTGGAAGAGGACCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422809.5
ENST00000468059.1
CDS TCA 90 bp CAATCCAGCTGTTCTGGAGTAAGCTTGTGCATTTTCAACAAGGACTaGAAATCATTTCGAGACAGTGAAATTATCCGTTGTGCATTGAAT +
Preference number: 5 (lower is better)
Translates to: QSSCSGVSLCIFNKD*KSFRDSEIIRCALN
Trigger: ATTCAATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAGTCCTTGTTGAAAATGCACAAGCTTACTCCAGAACAGCTGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS CCA 90 bp TTTCAGAAATTAAAAATGAAAGTGGGCAATCTGCAGCTGAGTACTTaGCGAGTATCTGTATTTGTTCTTGACTCAGAGCTGCTTCTTTAC +
Preference number: 5 (lower is better)
Translates to: FQKLKMKVGNLQLST*RVSVFVLDSELLLY
Trigger: GTAAAGAAGCAGCTCTGAGTCAAGAACAAATACAGATACTCGCCAAGTACTCAGCTGCAGATTGCCCACTTTCATTTTTAATTTCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATGGAATTTTCTGTATTaGGGGCATAAAGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVWNFLY*GHKEGK
Trigger: CTTGCCTTCTTTATGCCCCAAATACAGAAAATTCCA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTATTTCAGACCTTTCATTaGGCTGAACAGAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVFQTFH*AEQKHE
Trigger: TTCATGCTTCTGTTCAGCCAAATGAAAGGTCTGAAA...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCCTTCTGATTTTTCAGTaGGGCACTGAGAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESLLIFQ*GTEKQD
Trigger: ATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAG...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTAATTATCCGTTGTGCATaGAATGGCAGTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVIIRCA*NGSFTS
Trigger: TGAGGTAAAACTGCCATTCAATGCACAACGGATAAT...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCTCCCATTATCCGTTGTGCATaGAATGGCAGTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: IHFLQTLLAACSFKNVSPIIRCA*NGSFTS
Trigger: TGAGGTAAAACTGCCATTCAATGCACAACGGATAAT...GGGAGAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS-3UTR CAA 90 bp ACATTTGCACATACACAAACTGATACAACCAATAGTTGGGTGTACACTGAGGTACACACACAAATTCTTTaGCAGTATGGGATGCACTAT +
Preference number: 5 (lower is better)
Translates to: TFAHTQTDTTNSWVYTEVHTQIL*QYGMHY
Trigger: ATAGTGCATCCCATACTGCAAAAGAATTTGTGTGTG...TACCTCAGTGTACACCCAACTATTGGTTGTATCAGTTTGTGTATGTGCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp ATTCACTTTTTGCAGACATTATTGGCAGCTTGTTCCTTCAAAAATGTCTCTCCCGACATTATTGGCAGCTaGTTCCTTCAAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: IHFLQTLLAACSFKNVSPDIIGS*FLQKCL
Trigger: GAGACATTTTTGAAGGAACAAGCTGCCAATAATGTC...GGGAGAGACATTTTTGAAGGAACAAGCTGCCAATAATGTCTGCAAAAAGTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS GCA 90 bp TTCAAGATTCTGTATACAGTCAAGTTTTCTCTTGCGACAGCGCTGTaGAGCAATTCTGTTTTTACTTCTTCTTCGAATATCATGGATACA +
Preference number: 5 (lower is better)
Translates to: FKILYTVKFSLATAL*SNSVFTSSSNIMDT
Trigger: TGTATCCATGATATTCGAAGAAGAAGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTGTATACAGAATCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATATTATCCGTTGTGCATaGAATGGCAGTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNIIRCA*NGSFTS
Trigger: TGAGGTAAAACTGCCATTCAATGCACAACGGATAAT...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTATACCACACCAAATTaGGAGAAGAGAGCAAGGATT +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNYTTPN*EKRARI
Trigger: AATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTATA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTTTCTTCAGGTTCCATaGCTAATTTACTTTCGTCAC +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNFLQVP*LIYFRH
Trigger: GTGACGAAAGTAAATTAGCAATGGAACCTGAAGAAA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTTTCCAATTTCCAAATaGCTTGAACAGCCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNFPISK*LEQPSV
Trigger: TACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAAA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp TGCAGGCCACTTCTTTTAGTAGGAACTATCTGTAGATGTTTCAAGCTGTTAAATTATCTGTATTTGTTCTaGACTCAGAGCTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: CRPLLLVGTICRCFKLLNYLYLF*TQSCFF
Trigger: AAAGAAGCAGCTCTGAGTCAAGAACAAATACAGATA...ATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTCTTCAGGTTCCATaGCTAATTTACTTTCGTCAC +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFLQVP*LIYFRH
Trigger: GTGACGAAAGTAAATTAGCAATGGAACCTGAAGAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS-3UTR CAA 90 bp CAAGTTAAAATGATTTGTGTGTCTTTATACCACACCAAATTTGGAGAAGAGAGCTTTCCAATTTCCAAATaGCTTGAACAGCCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: QVKMICVSLYHTKFGEESFPISK*LEQPSV
Trigger: TACTGAAGGCTGTTCAAGCAATTTGGAAATTGGAAA...GCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS GCA 72 bp CAGCCTGGCCTACGATTCTTGAGTGGAAGTAACTGCTaGATGCCGCCAGCACGGACCGGTGAGCGCGGAACC +
Preference number: 6 (lower is better)
Translates to: QPGLRFLSGSNC*MPPARTGERGT
Trigger: GGTTCCGCGCTCACCGGTCCGTGCTGGCGGCATGCAGCAGTTACTTCCACTCAAGAATCGTAGGCCAGGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
CDS TCA 72 bp GGTGAGCGCGGAACCGCTGTCCCTCCACAAAGATGGTaGCATCGCACAGCACATCTTTCTTCCGCTGGTCAT +
Preference number: 6 (lower is better)
Translates to: GERGTAVPPQRW*HRTAHLSSAGH
Trigger: ATGACCAGCGGAAGAAAGATGTGCTGTGCGATGTCACCATCTTTGTGGAGGGACAGCGGTTCCGCGCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
CDS GCA 72 bp CTCTTCACTCTGATTTGCCCCTCTGTTGGTCTGACATaGCCTGATAGAGCACAGGGCATCCAGCCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LFTLICPSVGLT*PDRAQGIQPVS
Trigger: GGAGACTGGCTGGATGCCCTGTGCTCTATCAGGGCATGTCAGACCAACAGAGGGGCAAATCAGAGTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422809.5
ENST00000462262.1
ENST00000468059.1
CDS GCA 72 bp ATAGAGCACAGGGCATCCAGCCAGTCTCCACGATGGTaGATGGGATGTTGGCACCAGGTAACTTCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: IEHRASSQSPRW*MGCWHQVTSVR
Trigger: TCTCACAGAAGTTACCTGGTGCCAACATCCCATGCACCATCGTGGAGACTGGCTGGATGCCCTGTGCTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS TCA 72 bp AGGGAGGCAGCACTGCTGGAGGCCGGTCAGATAAACTaGAAATTGATGGTAACGCCAGTTCACCATCAGGAG +
Preference number: 6 (lower is better)
Translates to: REAALLEAGQIN*KLMVTPVHHQE
Trigger: CTCCTGATGGTGAACTGGCGTTACCATCAATTTTCAGTTTATCTGACCGGCCTCCAGCAGTGCTGCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 72 bp ACGATGGTGCATGGGATGTTGGCGAACCAGGGTTGCTaGTTAAGTGACCACAGGCCATGGTTCAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: TMVHGMLANQGC*LSDHRPWFSFS
Trigger: TGAGAAGCTGAACCATGGCCTGTGGTCACTTAATCAGCAACCCTGGTTCGCCAACATCCCATGCACCATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422809.5
CDS CAA 72 bp GAGTGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTaGCTAGGTGTTCTGCCACTTCTCGCTCCACACTAC +
Preference number: 6 (lower is better)
Translates to: ECPCCKCHSRSL*LGVLPLLAPHY
Trigger: GTAGTGTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTGGAGTGACATTTGCAGCACGGACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CAA 90 bp TTTGGCAAGGAGTGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTaGCTAGGTGTTCTGCCACTTCTCGCTCCACACTACTCCTATCAC +
Preference number: 6 (lower is better)
Translates to: FGKECPCCKCHSRSL*LGVLPLLAPHYSYH
Trigger: GTGATAGGAGTAGTGTGGAGCGAGAAGTGGCAGAACACCTAGCAAAAGGCTTCTGGAGTGACATTTGCAGCACGGACACTCCTTGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CCA 72 bp AAGGCAAGGCCAGAGCAGCATCCTTCTCTAAGCACATaGACTCATATGTCTGACTGGCACTGTCTTGTAGAG +
Preference number: 6 (lower is better)
Translates to: KARPEQHPSLST*THMSDWHCLVE
Trigger: CTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGGATGCTGCTCTGGCCTTGCCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000451655.5
CDS CCA 72 bp CAGACCGTTTCTGTGAGATCTGTTCTGAGCCATCTTTaGCCACAGCAGGTGATAACTGCATTTGGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: QTVSVRSVLSHL*PQQVITAFGKE
Trigger: CTCCTTGCCAAATGCAGTTATCACCTGCTGTGGCCAAAGATGGCTCAGAACAGATCTCACAGAAACGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CCA 72 bp CATCAACCATATTGTGCGAGGCTTAATTACAACGCGTaGGCAAAACTCCAACAAAGGGAGTCCTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: HQPYCARLNYNA*AKLQQRESWAL
Trigger: GAGAGCCCAGGACTCCCTTTGTTGGAGTTTTGCCCACGCGTTGTAATTAAGCCTCGCACAATATGGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399921.5
CDS TCA 72 bp GCAGCATCCTTCTCTAAGCACATGGACTCATATGTCTaGCTGGCACTGTCTTGTAGAGGAGGTGAGGCTTTT +
Preference number: 6 (lower is better)
Translates to: AASFSKHMDSYV*LALSCRGGEAF
Trigger: AAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGTCCATGTGCTTAGAGAAGGATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000447177.5
ENST00000451655.5
CDS TCA 72 bp GAATGGCAGTTTTACCTCACATTCTTGTTCTCTGGCTaGACAGGATTCACTGTCTCCTTCGGTGTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: EWQFYLTFLFSG*TGFTVSFGVRL
Trigger: GAGACGGACACCGAAGGAGACAGTGAATCCTGTTCAGCCAGAGAACAAGAATGTGAGGTAAAACTGCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS TCA 72 bp GAGAGGCCTCAGGAAACTTACAATCATGGCAGAAGGTaGAAGGGAAGCAAGGCACTTCTTCACAAGATGGCA +
Preference number: 6 (lower is better)
Translates to: ERPQETYNHGRR*KGSKALLHKMA
Trigger: TGCCATCTTGTGAAGAAGTGCCTTGCTTCCCTTTCACCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550131.5
CDS CAA 72 bp TCTGACTGGCACTGTCTTGTAGAGGAGGTGAGGCTTTaGCATTTCCTTGATACCTGCGGAGTTTACACTGAG +
Preference number: 6 (lower is better)
Translates to: SDWHCLVEEVRL*HFLDTCGVYTE
Trigger: CTCAGTGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000447177.5
ENST00000451655.5
CDS CAA 72 bp TCAGACCGTTTCTGTGAGATCTGTTCTGAGCCATCTTaGGCCACAGCAGGTGATAACTGCATTTGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: SDRFCEICSEPS*ATAGDNCIWQG
Trigger: TCCTTGCCAAATGCAGTTATCACCTGCTGTGGCCAAAGATGGCTCAGAACAGATCTCACAGAAACGGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CAA 90 bp ACTCATATGTCTGACTGGCACTGTCTTGTAGAGGAGGTGAGGCTTTaGCATTTCCTTGATACCTGCGGAGTTTACACTGAGGAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: THMSDWHCLVEEVRL*HFLDTCGVYTEESE
Trigger: TTCAGACTCCTCAGTGTAAACTCCGCAGGTATCAAGGAAATGCAAAAGCCTCACCTCCTCTACAAGACAGTGCCAGTCAGACATATGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000447177.5
ENST00000451655.5
CDS TCA 72 bp GGGAAAGGAGTCACTTCTGATTTTTCAGTTGGGCACTaGGAAGCAGGATCTTTCTTCGTTTCTTCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: GKGVTSDFSVGH*EAGSFFVSSGS
Trigger: GGAACCTGAAGAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAGTGACTCCTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 72 bp GGGCAGTTGACAGAACTTAATGTTGTGAAAGTCCTTTaGCCTGGTTCTGGGCTCTCACTAATCCTGATACCT +
Preference number: 6 (lower is better)
Translates to: GQLTELNVVKVL*PGSGLSLILIP
Trigger: AGGTATCAGGATTAGTGAGAGCCCAGAACCAGGTCAAAGGACTTTCACAACATTAAGTTCTGTCAACTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
CDS TCA 72 bp TGTTGGCACCAGGTAACTTCTGTGAGACCCAAGTCTTaGTTCGTCTCTTTGCTGTACCTATTGTCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: CWHQVTSVRPKS*FVSLLYLLSGF
Trigger: AAAGCCTGACAATAGGTACAGCAAAGAGACGAATCAAGACTTGGGTCTCACAGAAGTTACCTGGTGCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS CCA 72 bp AAACTGAAGGCATGCCAGCAAAGAATCCGAGTGAGCTaGGCAAAATGCTCTCTACTTCAACAGTCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: KLKACQQRIRVS*AKCSLLQQSFA
Trigger: AGCAAAAGACTGTTGAAGTAGAGAGCATTTTGCCCAGCTCACTCGGATTCTTTGCTGGCATGCCTTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546469.5
CDS CAA 72 bp ATGTTGGCACCAGGTAACTTCTGTGAGACCCAAGTCTaGATTCGTCTCTTTGCTGTACCTATTGTCAGGCTT +
Preference number: 6 (lower is better)
Translates to: MLAPGNFCETQV*IRLFAVPIVRL
Trigger: AAGCCTGACAATAGGTACAGCAAAGAGACGAATCAAGACTTGGGTCTCACAGAAGTTACCTGGTGCCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS CAA 90 bp CTATGGAAGAATTGTGGGGGAAAGGAGTCACTTCTGATTTTTCAGTaGGGCACTGAGAAGCAGGATCTTTCTTCGTTTCTTCAGGTTCCA +
Preference number: 6 (lower is better)
Translates to: LWKNCGGKESLLIFQ*GTEKQDLSSFLQVP
Trigger: TGGAACCTGAAGAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAACTGAAAAATCAGAAGTGACTCCTTTCCCCCACAATTCTTCCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS GCA 72 bp GCATGCCAGCAAAGAATCCGAGTGAGCTGGGCAAAATaGTCTCTACTTCAACAGTCTTTTGCTAATCTCAAA +
Preference number: 6 (lower is better)
Translates to: ACQQRIRVSWAK*SLLQQSFANLK
Trigger: TTTGAGATTAGCAAAAGACTGTTGAAGTAGAGAGCATTTTGCCCAGCTCACTCGGATTCTTTGCTGGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546469.5
CDS CAA 72 bp TTCCTTTCCTTGCAAGTTTTCTCTCCAAGGCCAGAATaGCATCCTTCCTGTGTCATCCAGATAGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: FLSLQVFSPRPE*HPSCVIQIVIV
Trigger: GACAATGACTATCTGGATGACACAGGAAGGATGCAATTCTGGCCTTGGAGAGAAAACTTGCAAGGAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546469.5
ENST00000547141.5
ENST00000548219.5
ENST00000550131.5
CDS GCA 72 bp CATAGGCAAAAACCGAGTTCTCACTCAGAGACATTCTaGATAACAAATGTTGTCGGGAAGTTCAGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: HRQKPSSHSETF*ITNVVGKFSGK
Trigger: CTTTCCACTGAACTTCCCGACAACATTTGTTATGCAGAATGTCTCTGAGTGAGAACTCGGTTTTTGCCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000435072.1
ENST00000447177.5
ENST00000451655.5
ENST00000546469.5
ENST00000547141.5
ENST00000548219.5
ENST00000548467.1
ENST00000550131.5
CDS CAA 72 bp CTGAAAACCAAGGCTGCTGGCGAAGTGTCTAAACACTaGTATAAAGTGTGGAAGAAGGTTTGTACTCTGACA +
Preference number: 6 (lower is better)
Translates to: LKTKAAGEVSKH*YKVWKKVCTLT
Trigger: TGTCAGAGTACAAACCTTCTTCCACACTTTATACAAGTGTTTAGACACTTCGCCAGCAGCCTTGGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS TCA 72 bp GACACAAGCATATGGGCAAGGTTCTTGCTGGGGTTCTaGAACATAATCATCGTTTCCAATTTCCAAATTGCT +
Preference number: 6 (lower is better)
Translates to: DTSIWARFLLGF*NIIIVSNFQIA
Trigger: AGCAATTTGGAAATTGGAAACGATGATTATGTTTCAGAACCCCAGCAAGAACCTTGCCCATATGCTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
CDS CCA 72 bp TTAAAAATGAAAGTGGGCAATCTGCAGCTGAGTACTTaGCGAGTATCTGTATTTGTTCTTGACTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LKMKVGNLQLST*RVSVFVLDSEL
Trigger: CAGCTCTGAGTCAAGAACAAATACAGATACTCGCCAAGTACTCAGCTGCAGATTGCCCACTTTCATTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS CAA 72 bp AAGATTATTTTTGTTTCTCCCAGGCAGGATCAGTCCTaGTTAGGATTGAAAGCAGGCAACTGTAACAGAAGG +
Preference number: 6 (lower is better)
Translates to: KIIFVSPRQDQS*LGLKAGNCNRR
Trigger: CCTTCTGTTACAGTTGCCTGCTTTCAATCCTAACAAGGACTGATCCTGCCTGGGAGAAACAAAAATAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS CAA 72 bp CTTCACAAGATGGCAGGAAGGAGACGTGGTGATTCATaGAGGAACACATCTGAAATTCAAACATGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: LHKMAGRRRGDS*RNTSEIQTCSF
Trigger: AAAGGAACATGTTTGAATTTCAGATGTGTTCCTCAATGAATCACCACGTCTCCTTCCTGCCATCTTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550131.5
CDS CAA 90 bp TTTTTCTCTCTGAAAACCAAGGCTGCTGGCGAAGTGTCTAAACACTaGTATAAAGTGTGGAAGAAGGTTTGTACTCTGACAACAACTGCA +
Preference number: 6 (lower is better)
Translates to: FFSLKTKAAGEVSKH*YKVWKKVCTLTTTA
Trigger: TGCAGTTGTTGTCAGAGTACAAACCTTCTTCCACACTTTATACAAGTGTTTAGACACTTCGCCAGCAGCCTTGGTTTTCAGAGAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462262.1
CDS CAA 90 bp TTGGGCACTGAGAAGCAGGATCTTTCTTCGTTTCTTCAGGTTCCATaGCTAATTTACTTTCGTCACATTTTAACATCACCTGCAAATCTC +
Preference number: 6 (lower is better)
Translates to: LGTEKQDLSSFLQVP*LIYFRHILTSPANL
Trigger: GAGATTTGCAGGTGATGTTAAAATGTGACGAAAGTAAATTAGCAATGGAACCTGAAGAAACGAAGAAAGATCCTGCTTCTCAGTGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286800.8
ENST00000399921.5
CDS TCA 72 bp CGATGGTGCATGGGATGTTGGCAGCTTCTCAATTTCTaGTTCAAGATTCTGTATACAGTCAAGTTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: RWCMGCWQLLNF*FKILYTVKFSL
Trigger: AAGAGAAAACTTGACTGTATACAGAATCTTGAATCAGAAATTGAGAAGCTGCCAACATCCCATGCACCATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468059.1
CDS GCA 72 bp CTGATTCAAGATTCTGTATACAGTCAAGTTTTCTCTTaGGACAGCGCTGTGCAGCAATTCTGTTTTTACTTC +
Preference number: 6 (lower is better)
Translates to: LIQDSVYSQVFS*DSAVQQFCFYF
Trigger: GAAGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTGTATACAGAATCTTGAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS CCA 72 bp GCAGCAATTCTGTTTTTACTTCTTCTTCGAATATCATaGATACAATCCAGCTGTTCTGGAGTAAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: AAILFLLLLRIS*IQSSCSGVSLC
Trigger: GCACAAGCTTACTCCAGAACAGCTGGATTGTATCCATGATATTCGAAGAAGAAGTAAAAACAGAATTGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS CAA 72 bp TCTGATTCAAGATTCTGTATACAGTCAAGTTTTCTCTaGCGACAGCGCTGTGCAGCAATTCTGTTTTTACTT +
Preference number: 6 (lower is better)
Translates to: SDSRFCIQSSFL*RQRCAAILFLL
Trigger: AAGTAAAAACAGAATTGCTGCACAGCGCTGTCGCAAGAGAAAACTTGACTGTATACAGAATCTTGAATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1
CDS CAA 72 bp AAATCATTTCGAGACAGTGAAATTATCCGTTGTGCATaGAATGGCAGTTTTACCTCACATTCTTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: KSFRDSEIIRCA*NGSFTSHSCSL
Trigger: CAGAGAACAAGAATGTGAGGTAAAACTGCCATTCAATGCACAACGGATAATTTCACTGTCTCGAAATGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286800.8
ENST00000399921.5
ENST00000422809.5
ENST00000468059.1