Pregenerated sensors for BACE2-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000224388Ensembl transcript IDs: ENST00000433378.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTAAAGTTTGTGTATTCTAGATTACCACAGTTCCAGAGACAATGCTaGCACAAGGCTTCCAGCCCATCCTGTCCACTGACACGGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: VKFVYSRLPQFQRQC*HKASSPSCPLTRRM Trigger: CATTCTCCGTGTCAGTGGACAGGATGGGCTGGAAGCCTTGTGCCAGCATTGTCTCTGGAACTGTGGTAATCTAGAATACACAAACTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433378.1 |
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| CDS GCA 90 bp | TTAGTAAAGTTTGTGTATTCTAGATTACCACAGTTCCAGAGACAATaGTGGCACAAGGCTTCCAGCCCATCCTGTCCACTGACACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVKFVYSRLPQFQRQ*WHKASSPSCPLTRR Trigger: TCTCCGTGTCAGTGGACAGGATGGGCTGGAAGCCTTGTGCCAGCATTGTCTCTGGAACTGTGGTAATCTAGAATACACAAACTTTACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433378.1 |
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| CDS CCA 90 bp | GTTCACCATGGCTCTGGCAGCACCCAGAAGTTACCACCCTCACCCTaGAAATGTCTGCATAAACTGCCCCTTCATTTGCATATAATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VHHGSGSTQKLPPSP*KCLHKLPLHLHIIK Trigger: TTTAATTATATGCAAATGAAGGGGCAGTTTATGCAGACATTTCCAGGGTGAGGGTGGTAACTTCTGGGTGCTGCCAGAGCCATGGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433378.1 |
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| CDS TCA 72 bp | TTACTCCTCCAGTGCCAGGCAGGGCTCAGACCAAACTaGGCACTAGCTAAAATAGGTCCAGGGCAGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: LLLQCQAGLRPN*ALAKIGPGQML Trigger: TAGCATCTGCCCTGGACCTATTTTAGCTAGTGCTCAGTTTGGTCTGAGCCCTGCCTGGCACTGGAGGAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433378.1 |
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| CDS GCA 72 bp | TTTGTGTATTCTAGATTACCACAGTTCCAGAGACAATaGTGGCACAAGGCTTCCAGCCCATCCTGTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: FVYSRLPQFQRQ*WHKASSPSCPL Trigger: CAGTGGACAGGATGGGCTGGAAGCCTTGTGCCAGCATTGTCTCTGGAACTGTGGTAATCTAGAATACACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433378.1 |
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