RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BACE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000182240

Ensembl transcript IDs: ENST00000328735.10, ENST00000330333.11, ENST00000347667.5, ENST00000463674.5, ENST00000465326.5, ENST00000466122.5, ENST00000470864.5, ENST00000475618.1, ENST00000487994.5, ENST00000491838.5

Found 852 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGGCTCAGCAGAGCTGGCGGAAACGGTGAGGGCCCAGCTGCCGTaGCCCTCAACGACACTGTCAGGTAACTGCTGCCAGGAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: AGSAELAETVRAQLP*PSTTLSGNCCQEPS
Trigger: GGAAGGCTCCTGGCAGCAGTTACCTGACAGTGTCGTTGAGGGGCACGGCAGCTGGGCCCTCACCGTTTCCGCCAGCTCTGCTGAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp TCTGGAGAAAGAAGCTGTCGGATGTTCGGAATGCATGGGCTGGGCTaGCTCAGCAGAGCTGGCGGAAACGGTGAGGGCCCAGCTGCCGTG +
Preference number: 1 (lower is better)
Translates to: SGERSCRMFGMHGLG*LSRAGGNGEGPAAV
Trigger: CACGGCAGCTGGGCCCTCACCGTTTCCGCCAGCTCTGCTGAGCCAGCCCAGCCCATGCATTCCGAACATCCGACAGCTTCTTTCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp CCCTCAACGACACTGTCAGGTAACTGCTGCCAGGAGCCTTCCAGATaGTCAGACCCCAGAAGCCACTTTACCGGCCCCCTTTGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: PSTTLSGNCCQEPSR*SDPRSHFTGPLWPQ
Trigger: CTGAGGCCAAAGGGGGCCGGTAAAGTGGCTTCTGGGGTCTGAGCATCTGGAAGGCTCCTGGCAGCAGTTACCTGACAGTGTCGTTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp TCCGCAGATGTGGCTAACAGGGTGACACCAAGAGCCCAGGGAGCCTaGTCACGTCTGAAAGCCGTGGTTTCTGCTCTGCAGCCTCACCTG +
Preference number: 1 (lower is better)
Translates to: SADVANRVTPRAQGA*SRLKAVVSALQPHL
Trigger: CAGGTGAGGCTGCAGAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTCCCTGGGCTCTTGGTGTCACCCTGTTAGCCACATCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp CTGCCAACTGAGGGGTGGGACCTCTCTTCTGGCTCCTTCTTGCCCTaGCCTCTTTTCAGATTCTGGAACTTCCCAGGTCCCAGCCATCCT +
Preference number: 1 (lower is better)
Translates to: LPTEGWDLSSGSFLP*PLFRFWNFPGPSHP
Trigger: AGGATGGCTGGGACCTGGGAAGTTCCAGAATCTGAAAAGAGGGCAGGGCAAGAAGGAGCCAGAAGAGAGGTCCCACCCCTCAGTTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp CCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTaGATGACCTTGAACCTGCCTGTGTCCTGCGTGGGCCTTGAGGCA +
Preference number: 1 (lower is better)
Translates to: PLWPQLLDPPLQISR*MTLNLPVSCVGLEA
Trigger: TGCCTCAAGGCCCACGCAGGACACAGGCAGGTTCAAGGTCATGCACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp ACCAAGAGCCCAGGGAGCCTGCTCACGTCTGAAAGCCGTGGTTTCTaGTCTGCAGCCTCACCTGGGGAGCTTACTGAAATGCAGATTCCC +
Preference number: 1 (lower is better)
Translates to: TKSPGSLLTSESRGF*SAASPGELTEMQIP
Trigger: GGGAATCTGCATTTCAGTAAGCTCCCCAGGTGAGGCTGCAGAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTCCCTGGGCTCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp GCACAGAAGGTTCTTCTGGCTGCTGGAGAGTCTTCCAGGACACCATaGCAAGCCGACGTGGCCTCCACGTCTCTTTGGCAGAGTCCTATA +
Preference number: 1 (lower is better)
Translates to: AQKVLLAAGESSRTP*QADVASTSLWQSPI
Trigger: TATAGGACTCTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACCTTCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp GCTGGGAGTTACGTATCCCCAACAGCTGTGATAGATTCCAGCCACTaGTGCAACCTGAGGTTCGCTGGCAGCACTAAGCAGCGTGGCTAT +
Preference number: 1 (lower is better)
Translates to: AGSYVSPTAVIDSSH*CNLRFAGSTKQRGY
Trigger: ATAGCCACGCTGCTTAGTGCTGCCAGCGAACCTCAGGTTGCATCAGTGGCTGGAATCTATCACAGCTGTTGGGGATACGTAACTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTCTTAATAGCTGAGTTCATGGTTGCT +
Preference number: 1 (lower is better)
Translates to: RRVGTGESATIDPGC*PGNVIFLIAEFMVA
Trigger: AGCAACCATGAACTCAGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp TTCTGGCTGCTGGAGAGTCTTCCAGGACACCATGACAAGCCGACGTaGCCTCCACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGG +
Preference number: 1 (lower is better)
Translates to: FWLLESLPGHHDKPT*PPRLFGRVLYFSVW
Trigger: CCATACTGAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAGCAGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp ATTATGAGTTTTCAACAAGCTGAGAGCGGATGTGACAACGGGCCCTaGTACAAGAGCCCCCTCCTCCCGTTCCGTGCCGTCATGTTCTTT +
Preference number: 1 (lower is better)
Translates to: IMSFQQAESGCDNGP*YKSPLLPFRAVMFF
Trigger: AAAGAACATGACGGCACGGAACGGGAGGAGGGGGCTCTTGTATCAGGGCCCGTTGTCACATCCGCTCTCAGCTTGTTGAAAACTCATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp GCAGCAGGACGATTAAGACAAGGAGGATGGCTCCACAGACGCTCATaGGCGCATAGGACACAATCCACAAAATGGGCTCGCTCAAAGACT +
Preference number: 1 (lower is better)
Translates to: AAGRLRQGGWLHRRS*AHRTQSTKWARSKT
Trigger: AGTCTTTGAGCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATGAGCGTCTGTGGAGCCATCCTCCTTGTCTTAATCGTCCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR CCA 90 bp CAAATCTTCTCTAGTGAAAACAGCACAGAAGGTTCTTCTGGCTGCTaGAGAGTCTTCCAGGACACCATGACAAGCCGACGTGGCCTCCAC +
Preference number: 1 (lower is better)
Translates to: QIFSSENSTEGSSGC*RVFQDTMTSRRGLH
Trigger: GTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACCTTCTGTGCTGTTTTCACTAGAGAAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp TCTACCTCAACGGGCAAAAGGCCTTCCATCTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCAT +
Preference number: 1 (lower is better)
Translates to: STSTGKRPSIFRRGL*GPSVDDLLVNSGSH
Trigger: ATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAAGATGGAAGGCCTTTTGCCCGTTGAGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp TTCCAGGTGCATGACCTTGAACCTGCCTGTGTCCTGCGTGGGCCTTaGGGCATCTCTAGTTTGATTAGGACAGACGTGTTTTACACATGG +
Preference number: 1 (lower is better)
Translates to: FQVHDLEPACVLRGP*GISSLIRTDVFYTW
Trigger: CCATGTGTAAAACACGTCTGTCCTAATCAAACTAGAGATGCCTCAAGGCCCACGCAGGACACAGGCAGGTTCAAGGTCATGCACCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp GCTGACAGCAGTGAGACAGGAGGGAGCTCCTTTCCTGGAAGTCTCTaGCAGAAGACATTCTGGAGAAAGAAGCTGTCGGATGTTCGGAAT +
Preference number: 1 (lower is better)
Translates to: ADSSETGGSSFPGSL*QKTFWRKKLSDVRN
Trigger: ATTCCGAACATCCGACAGCTTCTTTCTCCAGAATGTCTTCTGTCAGAGACTTCCAGGAAAGGAGCTCCCTCCTGTCTCACTGCTGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp ACTCAAATCTTCTCTAGTGAAAACAGCACAGAAGGTTCTTCTGGCTaGTGGAGAGTCTTCCAGGACACCATGACAAGCCGACGTGGCCTC +
Preference number: 1 (lower is better)
Translates to: TQIFSSENSTEGSSG*WRVFQDTMTSRRGL
Trigger: GAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACCTTCTGTGCTGTTTTCACTAGAGAAGATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp CCCAGAGGAGAGACAGATATTTTACCATCACAGCGTTCCCCAAGATaGTGGCAGAGACACCAGGATGGCTGCTCTCACAATAGTGTCCAA +
Preference number: 1 (lower is better)
Translates to: PRGETDILPSQRSPR*WQRHQDGCSHNSVQ
Trigger: TTGGACACTATTGTGAGAGCAGCCATCCTGGTGTCTCTGCCAGCATCTTGGGGAACGCTGTGATGGTAAAATATCTGTCTCTCCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp AGCATATGTGATAGTGGCCAGCTTGGGGATAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGAT +
Preference number: 1 (lower is better)
Translates to: SICDSGQLGDRTLPG*CTVQHLLGLGCWDD
Trigger: ATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCTATCCCCAAGCTGGCCACTATCACATATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp CGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTGTaGTGTCTCTTGGCCCAGTCACTACCCACGGTGTGCTTTTTAAGC +
Preference number: 1 (lower is better)
Translates to: RRSCRGWIQIYQEAL*CLLAQSLPTVCFLS
Trigger: GCTTAAAAAGCACACCGTGGGTAGTGACTGGGCCAAGAGACATCACAAAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp GAATCAGGCAAGGTCCTTCCAAGTGTTCAGAAGTGGAACCTGTTGTaGAAAAACACTCCCCTCGGTCACACACAGGGCATCTGTTTCTTG +
Preference number: 1 (lower is better)
Translates to: ESGKVLPSVQKWNLL*KNTPLGHTQGICFL
Trigger: CAAGAAACAGATGCCCTGTGTGTGACCGAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTGAACACTTGGAAGGACCTTGCCTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp CCCAGAGGAAGCTCAGGGCAGGGAAGAAAATACTGGATTTATTGCTaGGAGTTACGTATCCCCAACAGCTGTGATAGATTCCAGCCACTG +
Preference number: 1 (lower is better)
Translates to: PRGSSGQGRKYWIYC*ELRIPNSCDRFQPL
Trigger: CAGTGGCTGGAATCTATCACAGCTGTTGGGGATACGTAACTCCCAGCAATAAATCCAGTATTTTCTTCCCTGCCCTGAGCTTCCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp CAGGGAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTaGATACAAACGATACTTCTGCAGGAGGGGACACTTAGCACTTTT +
Preference number: 1 (lower is better)
Translates to: QGAEQMAETSTRSLL*IQTILLQEGTLSTF
Trigger: AAAAGTGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp GCAAAGCGGCCCACAAAACAGCAACCACGGAAAAAGCCAATGGGATaGGAATTGGACTTCCAGACATCTCTCCGTGTGAAATGCATTCTG +
Preference number: 1 (lower is better)
Translates to: AKRPTKQQPRKKPMG*ELDFQTSLRVKCIL
Trigger: CAGAATGCATTTCACACGGAGAGATGTCTGGAAGTCCAATTCTCATCCCATTGGCTTTTTCCGTGGTTGCTGTTTTGTGGGCCGCTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp AGAACTATGCCTGTTCATCTGCTGCAGGAGGAAGCTCCCCGCCTCTaGAACCTAACACAATACAACGGAACAGAAGATGCCTGTATGAAG +
Preference number: 1 (lower is better)
Translates to: RTMPVHLLQEEAPRL*NLTQYNGTEDACMK
Trigger: CTTCATACAGGCATCTTCTGTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGATGAACAGGCATAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp TTGAACCTGCCTGTGTCCTGCGTGGGCCTTGAGGCATCTCTAGTTTaGTTAGGACAGACGTGTTTTACACATGGCTGTCAAGCAAGTTTC +
Preference number: 1 (lower is better)
Translates to: LNLPVSCVGLEASLV*LGQTCFTHGCQASF
Trigger: GAAACTTGCTTGACAGCCATGTGTAAAACACGTCTGTCCTAATCAAACTAGAGATGCCTCAAGGCCCACGCAGGACACAGGCAGGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp AATTATCCATCTGTAAAGGGAACTGCTCACTTCTCAGGGCTGCCCTaGTTCCCAGAGGAGAGACAGATATTTTACCATCACAGCGTTCCC +
Preference number: 1 (lower is better)
Translates to: NYPSVKGTAHFSGLP*FPEERQIFYHHSVP
Trigger: GGGAACGCTGTGATGGTAAAATATCTGTCTCTCCTCTGGGAATCAGGGCAGCCCTGAGAAGTGAGCAGTTCCCTTTACAGATGGATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp TTGGACTTCCAGACATCTCTCCGTGTGAAATGCATTCTGAGATTATaGGTTTTCAACAAGCTGAGAGCGGATGTGACAACGGGCCCTGAT +
Preference number: 1 (lower is better)
Translates to: LDFQTSLRVKCILRL*VFNKLRADVTTGPD
Trigger: ATCAGGGCCCGTTGTCACATCCGCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGATGTCTGGAAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp CCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTaGAAGCTTGCCAAGCTAAGCATCAATTTGCATAACTGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: PQRVVNSFPVPSKPP*KLAKLSINLHNWRR
Trigger: CCTCCTCCAGTTATGCAAATTGATGCTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp ACTGACCCCAAATTTATCTCCAACCAAAACCTCTGTGTTTCACCATaGATCAGGCAAGGTCCTTCCAAGTGTTCAGAAGTGGAACCTGTT +
Preference number: 1 (lower is better)
Translates to: TDPKFISNQNLCVSP*IRQGPSKCSEVEPV
Trigger: AACAGGTTCCACTTCTGAACACTTGGAAGGACCTTGCCTGATTCATGGTGAAACACAGAGGTTTTGGTTGGAGATAAATTTGGGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp TCATACTGCAAGCCTTCCTGTACCACTTTGACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAGGCAATTAATACAAAAAGCTTCCTG +
Preference number: 1 (lower is better)
Translates to: SYCKPSCTTLTQVEV*RKITSKAINTKSFL
Trigger: CAGGAAGCTTTTTGTATTAATTGCCTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGGCTTGCAGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR TCA 90 bp CACAATGTAGCAAGCGAAACCATACTCATATCAGGGAACTTGCAATaGCCTCCACATATAGCACTCAACAGAAAAACATATGTCCTGACC +
Preference number: 1 (lower is better)
Translates to: HNVASETILISGNLQ*PPHIALNRKTYVLT
Trigger: GGTCAGGACATATGTTTTTCTGTTGAGTGCTATATGTGGAGGTCATTGCAAGTTCCCTGATATGAGTATGGTTTCGCTTGCTACATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp CTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATACTTCTaGAGGAGGGGACACTTAGCACTTTTGGTGGAATTCTGTAATATA +
Preference number: 1 (lower is better)
Translates to: LKHPHVAYCEYKRYF*RRGHLALLVEFCNI
Trigger: TATATTACAGAATTCCACCAAAAGTGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 90 bp CTATGTGTGAGGCACACGTGTGTTCTACACAGTTTGGACTTTATCTaGTTGGTCTTACACAAACAATTATCCATCTGTAAAGGGAACTGC +
Preference number: 1 (lower is better)
Translates to: LCVRHTCVLHSLDFI*LVLHKQLSICKGNC
Trigger: GCAGTTCCCTTTACAGATGGATAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGTGCCTCACACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 90 bp ACTAACAGGGTTTTGACTGGAAGTCCGATTCTCAGCAGCAAGACATaGCAGAAAAATGTCCCACATTCAATTGTCTATCTCATTCTTGTT +
Preference number: 1 (lower is better)
Translates to: TNRVLTGSPILSSKT*QKNVPHSIVYLILV
Trigger: AACAAGAATGAGATAGACAATTGAATGTGGGACATTTTTCTGGCATGTCTTGCTGCTGAGAATCGGACTTCCAGTCAAAACCCTGTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCCTCCTCCCGTTCCGTaGCGTCATGTTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLPPPVP*RHVLSK
Trigger: CTTGGAAAGAACATGACGGCACGGAACGGGAGGAGG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGCTCACTACAACCTCTaGCTCCCCGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: AHGILGTFLADADLRAPLAHYNL*LPGSSD
Trigger: ATCGCTTGAACCGGGGAGGCAGAGGTTGTAGTGAGC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCACAAAAGGGGCCTGTaGCTCTGGTTCCAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLHKRGL*LWFQVS
Trigger: TGAGACCTGGAACCAGAGCCACAGGCCCCTTTTGTG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGGTTCTTCTGGCTGCTaGAGAGTCTTCCAGGACACC +
Preference number: 2 (lower is better)
Translates to: AHGILGTFLADADLRAPLGSSGC*RVFQDT
Trigger: GGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTTTTCACAGCAAGGGTaGAGGCACAATCTAGGGGTG +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLFSQQG*RHNLGV
Trigger: CACCCCTAGATTGTGCCTTCACCCTTGCTGTGAAAA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 2 (lower is better)
Translates to: RRVGTGESATIDPGCCPGTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCCTCCTAGTGAATTCTaGCTCCCATTCAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: AHGILGTFLADADLRAPLPPSEF*LPFRAQ
Trigger: CTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGTCACGGGGGCGACGCTaGCACCGGAACGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGSRGRR*HRNGSS
Trigger: GCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCCGTGA...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGGGGACGTTCTTGGCTaGTGCGGACCTCCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLGDVLG*CGPPCP
Trigger: GGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGCAGCAGCAGCAGGACGATTAAGACAAGGAGGATGGCTCCACAGACGCTCATGGGCTCGCTCAAAGACTaGGCGGGGACACAGTTGCTG +
Preference number: 2 (lower is better)
Translates to: GSSSRTIKTRRMAPQTLMGSLKD*AGTQLL
Trigger: CAGCAACTGTGTCCCCGCTCAGTCTTTGAGCGAGCC...CATGAGCGTCTGTGGAGCCATCCTCCTTGTCTTAATCGTCCTGCTGCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGATGAAATACAGAGCATaGCGGCAAACTTCATTCACC +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLMKYRA*RQTSFT
Trigger: GGTGAATGAAGTTTGCCGTCATGCTCTGTATTTCAT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCACTCCACAGACGCTCATaGGCGCATAGGACACAATCC +
Preference number: 2 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPLHRRS*AHRTQS
Trigger: GGATTGTGTCCTATGCGCTCATGAGCGTCTGTGGAG...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCCACAAAAGGGGCCTGTaGCTCTGGTTCCAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGHKRGL*LWFQVS
Trigger: TGAGACCTGGAACCAGAGCCACAGGCCCCTTTTGTG...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp GTCTTCCAGGACACCATGACAAGCCGACGTGGCCTCCACGTCTCTTaGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACC +
Preference number: 2 (lower is better)
Translates to: VFQDTMTSRRGLHVS*AESYISQYGGDPGT
Trigger: GGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTGCCCCACTGCCAACTaGGGGGTGGGACCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLCPTAN*GVGPLF
Trigger: GAAGAGAGGTCCCACCCCTCAGTTGGCAGTGGGGCA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGAACCCCATAGAGCCTaGAGCCCAATCCACTCTGTT +
Preference number: 2 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGEPHRA*SPIHSV
Trigger: AACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTTCACCTACTCTACCTaGAAACCTCACTTGTTACTT +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLFTYST*KPHLLL
Trigger: AAGTAACAAGTGAGGTTTCCAGGTAGAGTAGGTGAA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGCAAGAGAAAACACATaGGGATTCCACTCCATTATT +
Preference number: 2 (lower is better)
Translates to: AHGILGTFLADADLRAPLARENT*GFHSII
Trigger: AATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp CAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGTGGTCAAGGCTGCCTGCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: QFSTCWVLAVGMIIL*GEGNSRGQGCLHPH
Trigger: ATGGGGGTGCAGGCAGCCTTGACCACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPEQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCTACTTTCACAATTTTaGACAGTAACTGACCCCAAA +
Preference number: 2 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLLLSQF*TVTDPK
Trigger: TTTGGGGTCAGTTACTGTTCAAAATTGTGAAAGTAG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAGCCGTGGTCAAGGCTaGCTGCACCCCCATCCAGGC +
Preference number: 2 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSRGQG*LHPHPG
Trigger: GCCTGGATGGGGGTGCAGGCAGCCTTGACCACGGCT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPEIEDG*AQEKAP
Trigger: TGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTCCTGGGGACGTTCTTaGCTGATGCGGACCTCCGTG +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLSWGRS*LMRTSV
Trigger: CACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPEQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAAACGTGGGGTGAAATaGGGTGCCCACGGCATCCTG +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLKRGVK*GAHGIL
Trigger: CAGGATGCCGTGGGCACCTCATTTCACCCCACGTTT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTACCTCCGTGCCCCACTaGCAACTGAGGGGTGGGACC +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTTSVPH*QLRGGT
Trigger: GGTCCCACCCCTCAGTTGGCAGTGGGGCACGGAGGT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: NLGVLASLLCKAAHKTATEIEDG*AQEKAP
Trigger: TGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTC...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAAGGGGCCTGTGGCTCTaGTTCCAGGTCTCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRRGLWL*FQVSRV
Trigger: TACCCTTGAGACCTGGAACCAGAGCCACAGGCCCCT...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCATGACAAGCCGACGTaGCCTCCACGTCTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLHDKPT*PPRLFG
Trigger: GCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGAACTGAACCACACGTaGCAGCTCCACCAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLELNHT*QLHQAG
Trigger: CCCTGCTTGGTGGAGCTGCCACGTGTGGTTCAGTTC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHREQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 2 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCCTCTGTGTTTCACCATaGATCAGGCAAGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISLCVSP*IRQGPS
Trigger: GGAAGGACCTTGCCTGATTCATGGTGAAACACAGAG...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTC +
Preference number: 2 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPIDPGC*PGNVIF
Trigger: GAAAATCACATTTCCAGGGCAGCAGCCGGGATCGAT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 2 (lower is better)
Translates to: PQADSPAIILQAFLYHFDTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCCAGTTCAGCACCTGTTaGGTCTTGGCTGTTGGGATG +
Preference number: 2 (lower is better)
Translates to: NLGVLASLLCKAAHKTATQFSTC*VLAVGM
Trigger: CATCCCAACAGCCAAGACCCAACAGGTGCTGAACTG...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAAGTGGTCAAGGCTGCCTaGACCCCCATCCAGGCACAG +
Preference number: 2 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEVVKAA*TPIQAQ
Trigger: CTGTGCCTGGATGGGGGTGCAGGCAGCCTTGACCAC...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGAGGCTAACCAGTTCTaGAAAGGGAAACACACGGTT +
Preference number: 2 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISEANQF*KGKHTV
Trigger: AACCGTGTGTTTCCCTTTGCAGAACTGGTTAGCCTC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGGCTCCTTCTTGCCCTaGCCTCTTTTCAGATTCTGG +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLGSFLP*PLFRFW
Trigger: CCAGAATCTGAAAAGAGGGCAGGGCAAGAAGGAGCC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTACACTGTCAGGTAACTaGTGCCAGGAGCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLTLSGN*CQEPSR
Trigger: TCTGGAAGGCTCCTGGCAGCAGTTACCTGACAGTGT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCTCAAGGGTACAGCTTaGTTACATCCCCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETLKGTA*LHPQAP
Trigger: TGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTCCTTCCCTGACAGCTaGTCAGAAATAGGGGCATCA +
Preference number: 2 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSFPDS*SEIGAS
Trigger: TGATGCCCCTATTTCTGACCAGCTGTCAGGGAAGGA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAGGGAGCAGAGCAGATaGCTGAAACATCCACACGTA +
Preference number: 2 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPREQSR*LKHPHV
Trigger: TACGTGTGGATGTTTCAGCCATCTGCTCTGCTCCCT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCCAAGCAAACCTCCTTaGAAGCTTGCCAAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLPSKPP*KLAKLS
Trigger: GCTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATGCCCCACTGCCAACTaGGGGGTGGGACCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKCPTAN*GVGPLF
Trigger: GAAGAGAGGTCCCACCCCTCAGTTGGCAGTGGGGCA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTGAGCCTGCTCACGTCTaGAAGCCGTGGTTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTEPAHV*KPWFLL
Trigger: GAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTC...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: PQADSPAIILQAFLYHFDTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCACTGCCAACTGAGGGGTaGGACCTCTCTTCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSLPTEG*DLSSGS
Trigger: GGAGCCAGAAGAGAGGTCCCACCCCTCAGTTGGCAG...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAGGGAGCTCCTTTCCTaGAAGTCTCTGACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLRELLS*KSLTED
Trigger: GTCTTCTGTCAGAGACTTCCAGGAAAGGAGCTCCCT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp CATGAATCAGGCAAGGTCCTTCCAAGTGTTCAGAAGTGGAACCTGTaGTGGAAAAACACTCCCCTCGGTCACACACAGGGCATCTGTTTC +
Preference number: 2 (lower is better)
Translates to: HESGKVLPSVQKWNL*WKNTPLGHTQGICF
Trigger: GAAACAGATGCCCTGTGTGTGACCGAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTGAACACTTGGAAGGACCTTGCCTGATTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 2 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 2 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGCTGTCACTTACACATaGCTCCCGCTTGAATATTCC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLAVTYT*LPLEYS
Trigger: GGAATATTCAAGCGGGAGTCATGTGTAAGTGACAGC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCCTCCTCCCGTTCCGTaGCGTCATGTTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTPPPVP*RHVLSK
Trigger: CTTGGAAAGAACATGACGGCACGGAACGGGAGGAGG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCTCAAGGGTACAGCTTaGTTACATCCCCAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILLKGTA*LHPQAP
Trigger: TGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGAACTGAACCACACGTaGCAGCTCCACCAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSELNHT*QLHQAG
Trigger: CCCTGCTTGGTGGAGCTGCCACGTGTGGTTCAGTTC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTTTACCGGCCCCCTTTaGCCTCAGTTGCTTGACCCT +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTFTGPL*PQLLDP
Trigger: AGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp ATAGAACTCTTCCTGGTTGATGCACAGTTCAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATTCTTTTGGGTGAGGGGAACAGCCGT +
Preference number: 2 (lower is better)
Translates to: IELFLVDAQFSTCWV*AVGMIILLGEGNSR
Trigger: ACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCCCCAGGCCCCAGGCTaGTTCTCCTGCCATCATACT +
Preference number: 2 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESPQAPG*FSCHHT
Trigger: AGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACACACGTAGCCTACTGTaGATACAAACGATACTTCTG +
Preference number: 2 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNTRSLL*IQTILL
Trigger: CAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGT...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTC +
Preference number: 2 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGIDPGC*PGNVIF
Trigger: GAAAATCACATTTCCAGGGCAGCAGCCGGGATCGAT...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGCAAGAGAAAACACATaGGGATTCCACTCCATTATT +
Preference number: 2 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGARENT*GFHSII
Trigger: AATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGATAATTCTTTTGGGTaGGGGGAACAGCCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILDNSFG*GEQPWS
Trigger: TGACCACGGCTGTTCCCCTCACCCAAAAGAATTATC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTTGGAATTGGTGGATCTaGAAAATAAATCACATCTCC +
Preference number: 2 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGWNWWI*KINHIS
Trigger: GGAGATGTGATTTATTTTGCAGATCCACCAATTCCA...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCCTCCTAGTGAATTCTaGCTCCCATTCAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILPPSEF*LPFRAQ
Trigger: CTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTGTGGAACAGACTGTTaGACAACGATTTATTCCCAA +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLCGTDC*TTIYSQ
Trigger: TTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAATAGATTCCAGCCACTaGTGCAACCTGAGGTTCGCT +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSIDSSH*CNLRFA
Trigger: AGCGAACCTCAGGTTGCATCAGTGGCTGGAATCTAT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGAACCCCATAGAGCCTaGAGCCCAATCCACTCTGTT +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKEPHRA*SPIHSV
Trigger: AACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACCCAGGCACAGGACCCTaGGCAAAGTCTCAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNPGTGP*AKSQKR
Trigger: CCTCTTTTGAGACTTTGCCCAGGGTCCTGTGCCTGG...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAATATTCCTGAAGTTTaGAATTGGTGGATCTGCAAA +
Preference number: 2 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISNIPEV*NWWICK
Trigger: TTTGCAGATCCACCAATTCCAAACTTCAGGAATATT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAGTAGGGAGGATTTaGAAGCTTGAAAATCAAGAA +
Preference number: 2 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHREVGRI*KLENQE
Trigger: TTCTTGATTTTCAAGCTTTCAAATCCTCCCTACTTC...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCTACAAATTTCCAGGTaGATGACCTTGAACCTGCCT +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTLQISR*MTLNLP
Trigger: AGGCAGGTTCAAGGTCATGCACCTGGAAATTTGTAG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATTGGGTCTTGGCTGTTaGGATGATAATTCTTTTGGG +
Preference number: 2 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRLGLGC*DDNSFG
Trigger: CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGCCTCCACGTCTCTTTaGCAGAGTCCTATATTTCTC +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSASTSL*QSPIFL
Trigger: GAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAAGCCTCCAGAGTAGCTaGGATTACAGACAGGCATCA +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSLQSS*DYRQAS
Trigger: TGATGCCTGTCTGTAATCCCAGCTACTCTGGAGGCT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACCTCTTTTCAGATTCTaGAACTTCCCAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKPLFRF*NFPGPS
Trigger: GCTGGGACCTGGGAAGTTCCAGAATCTGAAAAGAGG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTACACGTAGCCTACTGTaGATACAAACGATACTTCTG +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTTRSLL*IQTILL
Trigger: CAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCATACAAACGATACTTCTaGAGGAGGGGACACTTAGCA +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSYKRYF*RRGHLA
Trigger: TGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTA...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCTCCTTCCCTGACAGCTaGTCAGAAATAGGGGCATCA +
Preference number: 2 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESSFPDS*SEIGAS
Trigger: TGATGCCCCTATTTCTGACCAGCTGTCAGGGAAGGA...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTTTAAGCTGATTGGATaGGTATGCTTGAGGCTAACC +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTFKLIG*VCLRLT
Trigger: GGTTAGCCTCAAGCATACCCATCCAATCAGCTTAAA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAACACGGAAAAAGCCAATaGGATGAGAATTGGACTTCC +
Preference number: 2 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEHGKSQ*DENWTS
Trigger: GGAAGTCCAATTCTCATCCCATTGGCTTTTTCCGTG...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAATTACTGTTGTTTGTaGAACAGACTGTTGAACAAC +
Preference number: 2 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLNYCCL*NRLLNN
Trigger: GTTGTTCAACAGTCTGTTCCACAAACAACAGTAATT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATCACTAACAGGGTTTTaGCTGGAAGTCCGATTCTCA +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSLTGF*LEVRFS
Trigger: TGAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACTGATTGGATGGGTATaGTTGAGGCTAACCAGTTCT +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLIGWV*LRLTSS
Trigger: AGAACTGGTTAGCCTCAAGCATACCCATCCAATCAG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATATTACCCAAAGCACTaGGGAGTCACTAATGCTGTC +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKYYPKH*GVTNAV
Trigger: GACAGCATTAGTGACTCCGCAGTGCTTTGGGTAATA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCCAGGCACAGGACCCTaGGCAAAGTCTCAAAAGAGG +
Preference number: 2 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWPGTGP*AKSQKR
Trigger: CCTCTTTTGAGACTTTGCCCAGGGTCCTGTGCCTGG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATTGGGTCTTGGCTGTTaGGATGATAATTCTTTTGGG +
Preference number: 2 (lower is better)
Translates to: DTLKGLLIPFLFQANLLELGLGC*DDNSFG
Trigger: CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGACGTGTTTTACACATaGCTGTCAAGCAAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSDVFYT*LSSKFL
Trigger: GAGAAACTTGCTTGACAGCCATGTGTAAAACACGTC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAATATGTCCTGACCTTTaGAGACACTTCCCTGCTTAT +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSICPDL*RHFPAY
Trigger: ATAAGCAGGGAAGTGTCTCCAAAGGTCAGGACATAT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp TGTGTGAGGCACACGTGTGTTCTACACAGTTTGGACTTTATCTGGTaGGTCTTACACAAACAATTATCCATCTGTAAAGGGAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: CVRHTCVLHSLDFIW*VLHKQLSICKGNCS
Trigger: TGAGCAGTTCCCTTTACAGATGGATAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGTGCCTCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 2 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTG +
Preference number: 2 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSRTLPG*CTVQHL
Trigger: CAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCT...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCTCTGTGTTTCACCATaGATCAGGCAAGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSLCVSP*IRQGPS
Trigger: GGAAGGACCTTGCCTGATTCATGGTGAAACACAGAG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR GCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAACAACGGAACAGAAGATaGCTGTATGAAGAAATAAGC +
Preference number: 2 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEQRNRR*LYEEIS
Trigger: GCTTATTTCTTCATACAGGCATCTTCTGTTCCGTTG...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAATCAATTTGCATAACTaGAGGAGGTGGGTGTCACTA +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKINLHN*RRWVSL
Trigger: TAGTGACACCCACCTCCTCCAGTTATGCAAATTGAT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp TTACTCAGATGGCTATGTGTGAGGCACACGTGTGTTCTACACAGTTaGGACTTTATCTGGTTGGTCTTACACAAACAATTATCCATCTGT +
Preference number: 2 (lower is better)
Translates to: LLRWLCVRHTCVLHS*DFIWLVLHKQLSIC
Trigger: ACAGATGGATAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGTGCCTCACACATAGCCATCTGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 2 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAAATGGTTTCAGTTACTaGAGGCAGGATTTATTTCAG +
Preference number: 2 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSNGFSY*RQDLFQ
Trigger: CTGAAATAAATCCTGCCTTCAGTAACTGAAACCATT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATCTTCACCTCTTAAATaGAATGATGGAATCCCCAAC +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSSPLK*NDGIPN
Trigger: GTTGGGGATTCCATCATTTCATTTAAGAGGTGAAGA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTAGTTTGGACTTTATCTaGTTGGTCTTACACAAACAA +
Preference number: 2 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTSLDFI*LVLHKQ
Trigger: TTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp CACAGTCTCTCTTTGTCAAAGCTGTCACTTACACATGACTCCCGCTaGAATATTCCTGAAGTTTGGAATTGGTGGATCTGCAAAATAAAT +
Preference number: 2 (lower is better)
Translates to: HSLSLSKLSLTHDSR*NIPEVWNWWICKIN
Trigger: ATTTATTTTGCAGATCCACCAATTCCAAACTTCAGGAATATTCAAGCGGGAGTCATGTGTAAGTGACAGCTTTGACAAAGAGAGACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp CGATTCTCAGCAGCAAGACATGCCAGAAAAATGTCCCACATTCAATaGTCTATCTCATTCTTGTTGCGAAGTTATGCTTTTGTAGTTTCA +
Preference number: 2 (lower is better)
Translates to: RFSAARHARKMSHIQ*SISFLLRSYAFVVS
Trigger: TGAAACTACAAAAGCATAACTTCGCAACAAGAATGAGATAGACAATTGAATGTGGGACATTTTTCTGGCATGTCTTGCTGCTGAGAATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACGAAGTAGGGAGGATTTaGAAGCTTGAAAATCAAGAA +
Preference number: 2 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNEVGRI*KLENQE
Trigger: TTCTTGATTTTCAAGCTTTCAAATCCTCCCTACTTC...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTATGAAATACAGAGCATaGCGGCAAACTTCATTCACC +
Preference number: 2 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSMKYRA*RQTSFT
Trigger: GGTGAATGAAGTTTGCCGTCATGCTCTGTATTTCAT...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 2 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACCTGAAGTTTGGAATTaGTGGATCTGCAAAATAAAT +
Preference number: 2 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKPEVWN*WICKIN
Trigger: ATTTATTTTGCAGATCCACCAATTCCAAACTTCAGG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCAGAAGATGCCTGTATaGAGAAATAAGCAGGAAAAC +
Preference number: 2 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSQKMPV*RNKQEN
Trigger: GTTTTCCTGCTTATTTCTTCATACAGGCATCTTCTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 90 bp ATAAAGTCTGTGAAATTCAATTACTGTTGTTTGTGGAACAGACTGTaGAACAACGATTTATTCCCAATGATATCGAGTGGCACTAGTCCA +
Preference number: 2 (lower is better)
Translates to: IKSVKFNYCCLWNRL*NNDLFPMISSGTSP
Trigger: TGGACTAGTGCCACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACAGTAATTGAATTTCACAGACTTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGATCCTGGGGACGTTCTaGGCTGATGCGGACCTCCGT +
Preference number: 3 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLILGTF*ADADLR
Trigger: ACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGAT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GCAGAGCTGGCGGAAACGGTGAGGGCCCAGCTGCCGTaGCCCTCAACGACACTGTCAGGTAACTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: AELAETVRAQLP*PSTTLSGNCCQ
Trigger: CTGGCAGCAGTTACCTGACAGTGTCGTTGAGGGGCACGGCAGCTGGGCCCTCACCGTTTCCGCCAGCTCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp GATGCGGACCTCCGTGCCCCACTGCCAACTGAGGGGTaGGACCTCTCTTCTGGCTCCTTCTTGCCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: DADLRAPLPTEG*DLSSGSFLPCP
Trigger: AGGGCAGGGCAAGAAGGAGCCAGAAGAGAGGTCCCACCCCTCAGTTGGCAGTGGGGCACGGAGGTCCGCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATT +
Preference number: 3 (lower is better)
Translates to: AHGILGTFLADADLRAPLSTCWV*AVGMII
Trigger: AATTATCATCCCAACAGCCAAGACCCAACAGGTGCT...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GTGGCTAACAGGGTGACACCAAGAGCCCAGGGAGCCTaGTCACGTCTGAAAGCCGTGGTTTCTGCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: VANRVTPRAQGA*SRLKAVVSALQ
Trigger: CTGCAGAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTCCCTGGGCTCTTGGTGTCACCCTGTTAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GTTCTTCTGGCTGCTGGAGAGTCTTCCAGGACACCATaGCAAGCCGACGTGGCCTCCACGTCTCTTTGGCAG +
Preference number: 3 (lower is better)
Translates to: VLLAAGESSRTP*QADVASTSLWQ
Trigger: CTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp CGGGCCCTGATACAAGAGCCCCCTCCTCCCGTTCCGTaGCGTCATGTTCTTTCCAAGAGGCTGCAACTCAAA +
Preference number: 3 (lower is better)
Translates to: RALIQEPPPPVP*RHVLSKRLQLK
Trigger: TTTGAGTTGCAGCCTCTTGGAAAGAACATGACGGCACGGAACGGGAGGAGGGGGCTCTTGTATCAGGGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp CCAGGGAGCCTGCTCACGTCTGAAAGCCGTGGTTTCTaGTCTGCAGCCTCACCTGGGGAGCTTACTGAAATG +
Preference number: 3 (lower is better)
Translates to: PGSLLTSESRGF*SAASPGELTEM
Trigger: CATTTCAGTAAGCTCCCCAGGTGAGGCTGCAGAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp AAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCACCATCGATCCCGGCT +
Preference number: 3 (lower is better)
Translates to: KASGSRTEIEDG*AQEKAPPSIPA
Trigger: AGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCATTTCCCATCAGACTaGACAAGGTTTCTGATAACA +
Preference number: 3 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLHFPSD*TRFLIT
Trigger: TGTTATCAGAAACCTTGTCAAGTCTGATGGGAAATG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp CCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTaGATGACCTTGAACCTGCCTGTGTCCTGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: PQLLDPPLQISR*MTLNLPVSCVG
Trigger: GCCCACGCAGGACACAGGCAGGTTCAAGGTCATGCACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GGTTCGCTGGCAGCACTAAGCAGCGTGGCTATGTTCTaGCTTCCACATTCCGCAGATGTGGCTAACAGGGTG +
Preference number: 3 (lower is better)
Translates to: GSLAALSSVAMF*LPHSADVANRV
Trigger: CACCCTGTTAGCCACATCTGCGGAATGTGGAAGGCAGAACATAGCCACGCTGCTTAGTGCTGCCAGCGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACTCTCAAGGGTACAGCTaGGTTACATCCCCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNSQGYS*VTSPGP
Trigger: GGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAGA...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGATGTCCCACATTCAATaGTCTATCTCATTCTTGTTG +
Preference number: 3 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLMSHIQ*SISFLL
Trigger: CAACAAGAATGAGATAGACAATTGAATGTGGGACAT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCCCCTTTGGCCTCAGTaGCTTGACCCTCCCCTACAA +
Preference number: 3 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLPLWPQ*LDPPLQ
Trigger: TTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp AAGCCACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTaGCCCTCCCCTACAAATTTCCAGGTGCATGACCTT +
Preference number: 3 (lower is better)
Translates to: KPLYRPPLASVA*PSPTNFQVHDL
Trigger: AAGGTCATGCACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATTTTCTTAATAGCTGAG +
Preference number: 3 (lower is better)
Translates to: VGTGESATIDPG*CPGNVIFLIAE
Trigger: CTCAGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp CCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTaGCGTGGCTGGATTCAAATTTATCAGGAAGCTTTG +
Preference number: 3 (lower is better)
Translates to: PSIRDQVPARRS*RGWIQIYQEAL
Trigger: CAAAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp CTGGAGAGTCTTCCAGGACACCATGACAAGCCGACGTaGCCTCCACGTCTCTTTGGCAGAGTCCTATATTTC +
Preference number: 3 (lower is better)
Translates to: LESLPGHHDKPT*PPRLFGRVLYF
Trigger: GAAATATAGGACTCTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGACTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGT +
Preference number: 3 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISGMIIL*GEGNSR
Trigger: ACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAAGGGAACACTGAACTaGGCACACAAGCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISKGTLN*AHKQER
Trigger: TCTCTCCTGCTTGTGTGCCAAGTTCAGTGTTCCCTT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GATAGTGGCCAGCTTGGGGATAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTGTTGGGTCTTGGCTGT +
Preference number: 3 (lower is better)
Translates to: DSGQLGDRTLPG*CTVQHLLGLGC
Trigger: ACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCTATCCCCAAGCTGGCCACTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp TACGTATCCCCAACAGCTGTGATAGATTCCAGCCACTaGTGCAACCTGAGGTTCGCTGGCAGCACTAAGCAG +
Preference number: 3 (lower is better)
Translates to: YVSPTAVIDSSH*CNLRFAGSTKQ
Trigger: CTGCTTAGTGCTGCCAGCGAACCTCAGGTTGCATCAGTGGCTGGAATCTATCACAGCTGTTGGGGATACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CGATTAAGACAAGGAGGATGGCTCCACAGACGCTCATaGGCGCATAGGACACAATCCACAAAATGGGCTCGC +
Preference number: 3 (lower is better)
Translates to: RLRQGGWLHRRS*AHRTQSTKWAR
Trigger: GCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATGAGCGTCTGTGGAGCCATCCTCCTTGTCTTAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGTCACTAACAGGGTTTaGACTGGAAGTCCGATTCTC +
Preference number: 3 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISVTNRV*TGSPIL
Trigger: GAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGAC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAACCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGGCCTCCACGTCTCTTaGGCAGAGTCCTATATTTCT +
Preference number: 3 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLGLHVS*AESYIS
Trigger: AGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CATAACTGGAGGAGGTGGGTGTCACTAACAGGGTTTTaGCTGGAAGTCCGATTCTCAGCAGCAAGACATGCC +
Preference number: 3 (lower is better)
Translates to: HNWRRWVSLTGF*LEVRFSAARHA
Trigger: GGCATGTCTTGCTGCTGAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGACACCCACCTCCTCCAGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CATGACCTTGAACCTGCCTGTGTCCTGCGTGGGCCTTaGGGCATCTCTAGTTTGATTAGGACAGACGTGTTT +
Preference number: 3 (lower is better)
Translates to: HDLEPACVLRGP*GISSLIRTDVF
Trigger: AAACACGTCTGTCCTAATCAAACTAGAGATGCCTCAAGGCCCACGCAGGACACAGGCAGGTTCAAGGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GCTGATTGGATGGGTATGCTTGAGGCTAACCAGTTCTaGAAAGGGAAACACACGGTTTCGAAGCACGGGGAT +
Preference number: 3 (lower is better)
Translates to: ADWMGMLEANQF*KGKHTVSKHGD
Trigger: ATCCCCGTGCTTCGAAACCGTGTGTTTCCCTTTGCAGAACTGGTTAGCCTCAAGCATACCCATCCAATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCATCTCAAGGGTACAGCTaGGTTACATCCCCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSSQGYS*VTSPGP
Trigger: GGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAGA...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAATCTAGTACCTCTCTaGGCCAGAACCCCTAATTTT +
Preference number: 3 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISNLVPL*ARTPNF
Trigger: AAAATTAGGGGTTCTGGCCAAGAGAGGTACTAGATT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTGCAGTGGCGCAATCTaGGCTCACTACAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTCSGAI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATTGCGCCACTGCA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp ACGGGCAAAAGGCCTTCCATCTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGACCTCCTAGTGAATTCT +
Preference number: 3 (lower is better)
Translates to: TGKRPSIFRRGL*GPSVDDLLVNS
Trigger: AGAATTCACTAGGAGGTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAAGATGGAAGGCCTTTTGCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CCTGTGTCCTGCGTGGGCCTTGAGGCATCTCTAGTTTaGTTAGGACAGACGTGTTTTACACATGGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: PVSCVGLEASLV*LGQTCFTHGCQ
Trigger: TTGACAGCCATGTGTAAAACACGTCTGTCCTAATCAAACTAGAGATGCCTCAAGGCCCACGCAGGACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp CATGAATCAGGCAAGGTCCTTCCAAGTGTTCAGAAGTaGAACCTGTTGTGGAAAAACACTCCCCTCGGTCAC +
Preference number: 3 (lower is better)
Translates to: HESGKVLPSVQK*NLLWKNTPLGH
Trigger: GTGACCGAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTGAACACTTGGAAGGACCTTGCCTGATTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAAGCCAAGGCTTGGTTTaGTTTTATGTTGGTGGCACA +
Preference number: 3 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRSQGLV*FYVGGT
Trigger: TGTGCCACCAACATAAAACAAAACCAAGCCTTGGCT...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 3 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPRTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 3 (lower is better)
Translates to: PQADSPAIILQAFLYHFDRTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGT +
Preference number: 3 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGGMIIL*GEGNSR
Trigger: ACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCC...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAAGGGAACACTGAACTaGGCACACAAGCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRKGTLN*AHKQER
Trigger: TCTCTCCTGCTTGTGTGCCAAGTTCAGTGTTCCCTT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCATTTCCCATCAGACTaGACAAGGTTTCTGATAACA +
Preference number: 3 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGHFPSD*TRFLIT
Trigger: TGTTATCAGAAACCTTGTCAAGTCTGATGGGAAATG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTaGATACAAACGATACTTCTGCAGGAGGGGACACTT +
Preference number: 3 (lower is better)
Translates to: EQMAETSTRSLL*IQTILLQEGTL
Trigger: AAGTGTCCCCTCCTGCAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTACCTGGAAACCTCACTaGTTACTTTCCTGTATTTTA +
Preference number: 3 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGTWKPH*LLSCIL
Trigger: TAAAATACAGGAAAGTAACAAGTGAGGTTTCCAGGT...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTATGTCAAAGGCTAGGTaGCCAAGGACACCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTMSKAR*PRTPKV
Trigger: AACCTTGGGTGTCCTTGGCAACCTAGCCTTTGACAT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAGCCAAGGCTTGGTTTaGTTTTATGTTGGTGGCACA +
Preference number: 3 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSQGLV*FYVGGT
Trigger: TGTGCCACCAACATAAAACAAAACCAAGCCTTGGCT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTATTGGATGGGTATGCTaGAGGCTAACCAGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTIGWVC*RLTSSA
Trigger: TGCAGAACTGGTTAGCCTCAAGCATACCCATCCAAT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CCCACAAAACAGCAACCACGGAAAAAGCCAATGGGATaGGAATTGGACTTCCAGACATCTCTCCGTGTGAAA +
Preference number: 3 (lower is better)
Translates to: PTKQQPRKKPMG*ELDFQTSLRVK
Trigger: TTTCACACGGAGAGATGTCTGGAAGTCCAATTCTCATCCCATTGGCTTTTTCCGTGGTTGCTGTTTTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp CCACACGTAGCCTACTGTGAATACAAACGATACTTCTaGAGGAGGGGACACTTAGCACTTTTGGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: PHVAYCEYKRYF*RRGHLALLVEF
Trigger: GAATTCCACCAAAAGTGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GGAAGCTCAGGGCAGGGAAGAAAATACTGGATTTATTaGTGGGAGTTACGTATCCCCAACAGCTGTGATAGA +
Preference number: 3 (lower is better)
Translates to: GSSGQGRKYWIY*WELRIPNSCDR
Trigger: TCTATCACAGCTGTTGGGGATACGTAACTCCCAGCAATAAATCCAGTATTTTCTTCCCTGCCCTGAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 3 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMRTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATCCAAGCAAACCTCCTaGAAAGCTTGCCAAGCTAAG +
Preference number: 3 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSKQTS*KACQAK
Trigger: CTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGGA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp CAGACATCTCTCCGTGTGAAATGCATTCTGAGATTATaGGTTTTCAACAAGCTGAGAGCGGATGTGACAACG +
Preference number: 3 (lower is better)
Translates to: QTSLRVKCILRL*VFNKLRADVTT
Trigger: CGTTGTCACATCCGCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAGGACACTTAGCACTTTaGGTGGAATTCTGTAATATA +
Preference number: 3 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRGHLAL*VEFCNI
Trigger: TATATTACAGAATTCCACCAAAAGTGCTAAGTGTCC...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACAACCTAATGCTAAGTaGCACCTTTTCAGGCAAGGA +
Preference number: 3 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKQPNAK*HLFRQG
Trigger: TCCTTGCCTGAAAAGGTGCAACTTAGCATTAGGTTG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp AATGTGATTTTCTTAATAGCTGAGTTCATGGTTGCTTaGGGTCAGGCCTGGCTATTCATTTCCAGCGATGTC +
Preference number: 3 (lower is better)
Translates to: NVIFLIAEFMVA*GQAWLFISSDV
Trigger: GACATCGCTGGAAATGAATAGCCAGGCCTGACCTCAAGCAACCATGAACTCAGCTATTAAGAAAATCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
3UTR GCA 72 bp TCAACTGCTGAACAATTTAAGCTGATTGGATGGGTATaGTTGAGGCTAACCAGTTCTGCAAAGGGAAACACA +
Preference number: 3 (lower is better)
Translates to: STAEQFKLIGWV*LRLTSSAKGNT
Trigger: TGTGTTTCCCTTTGCAGAACTGGTTAGCCTCAAGCATACCCATCCAATCAGCTTAAATTGTTCAGCAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp GTTTTGACTGGAAGTCCGATTCTCAGCAGCAAGACATaGCAGAAAAATGTCCCACATTCAATTGTCTATCTC +
Preference number: 3 (lower is better)
Translates to: VLTGSPILSSKT*QKNVPHSIVYL
Trigger: GAGATAGACAATTGAATGTGGGACATTTTTCTGGCATGTCTTGCTGCTGAGAATCGGACTTCCAGTCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCACAATCTAGGGGTGTaGGCTTCACTCCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSHNLGV*ASLLCK
Trigger: TTTGCACAGGAGTGAAGCCAACACCCCTAGATTGTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTGCTAAGTACTTGGTTTaGGTTCAGGAGAAATACAAA +
Preference number: 3 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTAKYLV*VQEKYK
Trigger: TTTGTATTTCTCCTGAACCAAAACCAAGTACTTAGC...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCAGAAGTGGAACCTGTaGTGGAAAAACACTCCCCTC +
Preference number: 3 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSQKWNL*WKNTPL
Trigger: GAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTTCAATTACTGTTGTTaGTGGAACAGACTGTTGAAC +
Preference number: 3 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTFNYCC*WNRLLN
Trigger: GTTCAACAGTCTGTTCCACAAACAACAGTAATTGAA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR GCA 72 bp TCACAATTGCTTTTCAAAATCTATTACCCAAAGCACTaGGGAGTCACTAATGCTGTCTTCCTGGGAACTACT +
Preference number: 3 (lower is better)
Translates to: SQLLFKIYYPKH*GVTNAVFLGTT
Trigger: AGTAGTTCCCAGGAAGACAGCATTAGTGACTCCGCAGTGCTTTGGGTAATAGATTTTGAAAAGCAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGGCTTCCACTTTTCTTaGGCAAAGGCCTCGATAAGT +
Preference number: 3 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSGFHFS*AKASIS
Trigger: ACTTATCGAGGCCTTTGCCAAAGAAAAGTGGAAGCC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATTGTGGAACAGACTGTaGAACAACGATTTATTCCCA +
Preference number: 3 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLWNRL*NNDLFP
Trigger: TGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTaGAAGCTTGCCAAGCTAAGCATCAATTTGCATAAC +
Preference number: 3 (lower is better)
Translates to: VVNSFPVPSKPP*KLAKLSINLHN
Trigger: GTTATGCAAATTGATGCTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GGGTTATCAACTATATGTACTTATTTTTCCAGAGATTaGAGAGAGAAGAGAACGAGCCAAGGCTTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: GLSTICTYFSRD*REKRTSQGLVL
Trigger: CAAAACCAAGCCTTGGCTCGTTCTCTTCTCTCTTCAATCTCTGGAAAAATAAGTACATATAGTTGATAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp ACACGTGTGTTCTACACAGTTTGGACTTTATCTGGTTaGTCTTACACAAACAATTATCCATCTGTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: TRVFYTVWTLSG*SYTNNYPSVKG
Trigger: TCCCTTTACAGATGGATAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp GCAAGAGAAAACACATGGGGATTCCACTCCATTATTTaGTTTCCACTAATCAGGATAAAGTCTGTGAAATTC +
Preference number: 3 (lower is better)
Translates to: ARENTWGFHSII*FPLIRIKSVKF
Trigger: GAATTTCACAGACTTTATCCTGATTAGTGGAAATCAAATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CCA 72 bp AGACATTTGTCAGTAGCTATGAAGCCACTTTTAACATaGAATGAATATCCCTTTACTCCAACTCTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: RHLSVAMKPLLT*NEYPFTPTLGL
Trigger: AAGACCAAGAGTTGGAGTAAAGGGATATTCATTCCATGTTAAAAGTGGCTTCATAGCTACTGACAAATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR TCA 72 bp TTTGTCAGTAGCTATGAAGCCACTTTTAACATGGAATaGATATCCCTTTACTCCAACTCTTGGTCTTATTAC +
Preference number: 3 (lower is better)
Translates to: FVSSYEATFNME*ISLYSNSWSYY
Trigger: GTAATAAGACCAAGAGTTGGAGTAAAGGGATATTCATTCCATGTTAAAAGTGGCTTCATAGCTACTGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCCATGGCCAAGAAGTTaGCGGCGCCCGCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLPWPRS*RRPRGT
Trigger: CGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCAAGTTCTTCTCCGCTaGCCCCTCTGGCGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLQVLLR*PLWRPR
Trigger: TCGCGGCCGCCAGAGGGGGCAGCGGAGAAGAACTTG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGGCGACGCTGACACCGGAACGGCAGCAGCAGCAGGACGATTAAGACAAGGATCCCGGGTCCCGGGGTaGGCGCAACTACGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: GGDADTGTAAAAGRLRQGSRVPG*AQLRGS
Trigger: CGAACCGCGTAGTTGCGCCCACCCCGGGACCCGGGA...TCCTTGTCTTAATCGTCCTGCTGCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCCCCAGGCCCCAGGCTaGTTCTCCTGCCATCATACT +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLPQAPG*FSCHHT
Trigger: AGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGATTCTCAGTATGGTGGTaGCCCGGGGACCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGFSVWW*PGDPGS
Trigger: GCTCCCTGGGTCCCCGGGTCACCACCATACTGAGAA...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCCGTGGTTTCTGCTCTaGAGCCTCACCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLPWFLL*SLTWGA
Trigger: AGCTCCCCAGGTGAGGCTGCAGAGCAGAAACCACGG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTCCTGGGGACGTTCTTaGCTGATGCGGACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLSWGRS*LMRTSV
Trigger: CACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCTCACGGGGGCGACGCTaGCACCGGAACGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGSRGRR*HRNGSS
Trigger: GCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCCGTGA...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGATGTGGCTAACAGGGTaGCACCAAGAGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLMWLTG*HQEPRE
Trigger: CTCCCTGGGCTCTTGGTGTCACCCTGTTAGCCACAT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGTCGGATGTTCGGAATaGATGGGCTGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLVGCSE*MGWAGS
Trigger: TGAGCCAGCCCAGCCCATGCATTCCGAACATCCGAC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGGCTGAGGCAGGATTGTaGTACGGAATGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLAEAGL*YGMTCW
Trigger: CCAGCAGGTCATTCCGTATCACAATCCTGCCTCAGC...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330333.11
CDS-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLEIEDG*AQEKAP
Trigger: TGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTC...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCCAGGCACAGGACCCTaGGCAAAGTCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLPGTGP*AKSQKR
Trigger: CCTCTTTTGAGACTTTGCCCAGGGTCCTGTGCCTGG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGACTCCACAGACGCTCATaGGCGCATAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGLHRRS*AHRTQS
Trigger: GGATTGTGTCCTATGCGCTCATGAGCGTCTGTGGAG...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCGATGTCTGACCAGAGAGGACTCATCATTGACGACCTCAGGGTCACGGGGGCGCGGCCAGAGTCCCCCTaGAGGTTGTCTACCATGGCC +
Preference number: 4 (lower is better)
Translates to: AMSDQRGLIIDDLRVTGARPESP*RLSTMA
Trigger: GGCCATGGTAGACAACCTGCAGGGGGACTCTGGCCG...CGCCCCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCTGGTCAGACATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGGCGCAGCAGCGTGGTaGCACTGTCCACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGGAAAW*HCPRWP
Trigger: AGGCCATCGTGGACAGTGGCACCACGCTGCTGCGCC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCAGCCGTGGTCAAGGCTaGCTGCACCCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGSRGQG*LHPHPG
Trigger: GCCTGGATGGGGGTGCAGGCAGCCTTGACCACGGCT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACCGGGGACGTGGAGCCTaGGGAGCAGGGCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDRGRGA*GAGLPR
Trigger: GCGTGGGAGCCCTGCTCCCCAGGCTCCACGTCCCCG...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCTTGAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCACGGGGGCGACGCTaGCACCGGAACGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLRSGLAIHFQRCLTREDSRGRR*HRNGSS
Trigger: GCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCCGTGA...GTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTCAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCTCACGGGGGCGACGCTaGCACCGGAACGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPSRGRR*HRNGSS
Trigger: GCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCCGTGA...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGAAAGGCCTCGATAAGTaGCAGAAAGTAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLKGLDK*QKVGTA
Trigger: GGCAGTCCCTACTTTCTGTCACTTATCGAGGCCTTT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGATGCAAAGGGAACACTaGACTTGGCACACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLMQREH*TWHTSR
Trigger: CCTGCTTGTGTGCCAAGTTCAGTGTTCCCTTTGCAT...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCCAAGCAAACCTCCTTaGAAGCTTGCCAAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLPSKPP*KLAKLS
Trigger: GCTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCCAAGCAAACCTCCTTaGAAGCTTGCCAAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLPSKPP*KLAKLS
Trigger: GCTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGTTGGCCTCAGTTGCTTaGCCCTCCCCTACAAATTTC +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLLASVA*PSPTNF
Trigger: GAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAA...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAGAACCCCATAGAGCCTaGAGCCCAATCCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGEPHRA*SPIHSV
Trigger: AACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTC...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGCGCGCAGGAGCCACTaGGCCAGCAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDARRSH*ASRGSS
Trigger: GCTGCTGCCTCTGCTGGCCCAGTGGCTCCTGCGCGC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCTCGCTCAAAGACTaGGCGGGGACACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPGSLKD*AGTQLL
Trigger: CAGCAACTGTGTCCCCGCTCAGTCTTTGAGCGAGCC...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGATGCATCTTCCTTCCCTaGCAGCTGGTCAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGCIFLP*QLVRNR
Trigger: CCTATTTCTGACCAGCTGTCAGGGAAGGAAGATGCA...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGGTACTCTCCATCCGTTaGATGAACCAATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLVLSIR*MNQSLL
Trigger: GAGCAAGGATTGGTTCATTCAACGGATGGAGAGTAC...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGGCGACGCTGACACCGGAACGGCAGCAGCAGCAGGACGATTAAGACAAGGACCGGCTCCACACATCTaGATGGAGAAAACGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGDADTGTAAAAGRLRQGPAPHI*MEKTLG
Trigger: CCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGG...TCCTTGTCTTAATCGTCCTGCTGCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR GCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGACACGATGGCCTTGTCTaGGTTATACTCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGHDGLV*VILSAV
Trigger: GACTGCAGAGAGTATAACGCAGACAAGGCCATCGTG...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGAGGCTAACCAGTTCTaGAAAGGGAAACACACGGTT +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLEANQF*KGKHTV
Trigger: AACCGTGTGTTTCCCTTTGCAGAACTGGTTAGCCTC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGACTTCTGGCTCCTTCTTaGCCTGCCCTCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGLLAPS*PALFSD
Trigger: ATCTGAAAAGAGGGCAGGGCAAGAAGGAGCCAGAAG...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTACCTCCGTGCCCCACTaGCAACTGAGGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPTSVPH*QLRGGT
Trigger: GGTCCCACCCCTCAGTTGGCAGTGGGGCACGGAGGT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCATGGGGTGAAATGAGGTaGCCACGGCATCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPWGEMR*PRHPGD
Trigger: GTCCCCAGGATGCCGTGGGCACCTCATTTCACCCCA...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGCGCGCAGGAGCCACTaGGCCAGCAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRARRSH*ASRGSS
Trigger: GCTGCTGCCTCTGCTGGCCCAGTGGCTCCTGCGCGC...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGGCGACGCTGACACCGGAACGGCAGCAGCAGCAGGACGATTAAGACAAGGACTCAAGGGTACAGCTTaGTTACATCCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGDADTGTAAAAGRLRQGLKGTA*LHPQAP
Trigger: TGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAG...TCCTTGTCTTAATCGTCCTGCTGCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTAATCCTTGCTCCGCGTaGGCAACACCCGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPNPCSA*ATPGPP
Trigger: GGGTGGCCCGGGTGTTGCCCACGCGGAGCAAGGATT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAACTGTGCCAAAAACGTaGGGTGAAATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGTVPKT*GEMRCP
Trigger: TGGGCACCTCATTTCACCCCACGTTTTTGGCACAGT...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTaGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYS*VTSPGPRLILL
Trigger: CAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGGGGACGTTCTTGGCTaGTGCGGACCTCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGGDVLG*CGPPCP
Trigger: GGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAAAACGTGGGGTGAAATaGGGTGCCCACGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPKRGVK*GAHGIL
Trigger: CAGGATGCCGTGGGCACCTCATTTCACCCCACGTTT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCCCTCTCATATGTGCTaGGTAACTGCTACACAGAAT +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLPSHMC*VTATQN
Trigger: ATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACCAAGTTCTTCTCCGCTaGCCCCTCTGGCGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDQVLLR*PLWRPR
Trigger: TCGCGGCCGCCAGAGGGGGCAGCGGAGAAGAACTTG...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000347667.5
CDS-3UTR GCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCGGCCAGAGTCCCCCTaGAGGTTGTCTACCATGGCC +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFRPESP*RLSTMA
Trigger: GGCCATGGTAGACAACCTGCAGGGGGACTCTGGCCG...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTCGGCCAGAGTCCCCCTaGAGGTTGTCTACCATGGCC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPRPESP*RLSTMA
Trigger: GGCCATGGTAGACAACCTGCAGGGGGACTCTGGCCG...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTTGCACAGGGGCTCGCTaGGAAGCCCACCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGCTGAR*EAHPLL
Trigger: CAGAAGAGGGTGGGCTTCGCAGCGAGCCCCTGTGCA...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCTGATTGGATGGGTATaGTTGAGGCTAACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLLIGWV*LRLTSS
Trigger: AGAACTGGTTAGCCTCAAGCATACCCATCCAATCAG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGCGCGCAGGAGCCACTaGGCCAGCAGAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETARRSH*ASRGSS
Trigger: GCTGCTGCCTCTGCTGGCCCAGTGGCTCCTGCGCGC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCTCCCGGGTCCCGGGGTaGGCGCAACTACGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETSRVPG*AQLRGS
Trigger: CGAACCGCGTAGTTGCGCCCACCCCGGGACCCGGGA...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCCATGGCCAAGAAGTTaGCGGCGCCCGCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETPWPRS*RRPRGT
Trigger: CGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RRVGTGESATIDPGCCPGTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGAACTGAACCACACGTaGCAGCTCCACCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGELNHT*QLHQAG
Trigger: CCCTGCTTGGTGGAGCTGCCACGTGTGGTTCAGTTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGGTCTCCAGAGAACTTaGTGGCTTGGCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGGLQRT*WLGKCG
Trigger: GCCACACTTGCCAAGCCATCAAGTTCTCTGGAGACC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGGCTCGCTCAAAGACTaGGCGGGGACACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISGSLKD*AGTQLL
Trigger: CAGCAACTGTGTCCCCGCTCAGTCTTTGAGCGAGCC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPEQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGTGGTCAAGGCTGCCTaGACCCCCATCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNVVKAA*TPIQAQ
Trigger: CTGTGCCTGGATGGGGGTGCAGGCAGCCTTGACCAC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGTGGTCAAGGCTGCCTaGACCCCCATCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDVVKAA*TPIQAQ
Trigger: CTGTGCCTGGATGGGGGTGCAGGCAGCCTTGACCAC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCCCTCCTCCCGTTCCGTaGCGTCATGTTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGPPPVP*RHVLSK
Trigger: CTTGGAAAGAACATGACGGCACGGAACGGGAGGAGG...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGATAGTGTACAGTATATaGTGGGAGATCGGACACCAA +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLIVYSI*WEIGHQ
Trigger: TTGGTGTCCGATCTCCCAGCATATACTGTACACTAT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAACCTCCGTGCCCCACTaGCAACTGAGGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRTSVPH*QLRGGT
Trigger: GGTCCCACCCCTCAGTTGGCAGTGGGGCACGGAGGT...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGAGCCCAGGGAGCCTaGTCACGTCTGAAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISRAQGA*SRLKAV
Trigger: CACGGCTTTCAGACGTGAGCAGGCTCCCTGGGCTCT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCACCCGCACGTCGCTCTTaGCGTGGCTGGATTCAAATT +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPPARRS*RGWIQI
Trigger: AATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGG...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CATGAGCGCATAGGACACAATCCACAAAATGGGCTCGCTCAAAGACTGAGCGGGCCCGCGCCGCCAAGTTaGGCAAGTTCTTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: HERIGHNPQNGLAQRLSGPAPPS*ASSSPL
Trigger: CAGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGG...CCCGCTCAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACCCCGCGCCGCCAAGTTaGGCAAGTTCTTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNPAPPS*ASSSPL
Trigger: CAGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGG...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCACAAGACTACCTCCGTTaGTCCCAGATCCAGCAACGG +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPQDYLR*SQIQQR
Trigger: CCGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTG...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGCAGGCGCAGCAGCGTaGTGCCACTGTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRAGAAA*CHCPRW
Trigger: CCATCGTGGACAGTGGCACCACGCTGCTGCGCCTGC...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTAATCCTTGCTCCGCGTaGGCAACACCCGGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIANPCSA*ATPGPP
Trigger: GGGTGGCCCGGGTGTTGCCCACGCGGAGCAAGGATT...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGCGGGGACGTGGAGCCTaGGGAGCAGGGCTCCCACGC +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMRGRGA*GAGLPR
Trigger: GCGTGGGAGCCCTGCTCCCCAGGCTCCACGTCCCCG...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTTGCACTGACCCTGAATaGGGCTGGGTGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFCTDPE*GWVCSR
Trigger: CCTGGAGCACACCCAGCCCCATTCAGGGTCAGTGCA...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGAGAGGACTCATCATTaGCGACCTCAGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGERTHH*RPQGHG
Trigger: CCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGAGTTCATGGTTGCTTaGGGTCAGGCCTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPEFMVA*GQAWLF
Trigger: GAATAGCCAGGCCTGACCTCAAGCAACCATGAACTC...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGAGTTCATGGTTGCTTaGGGTCAGGCCTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGEFMVA*GQAWLF
Trigger: GAATAGCCAGGCCTGACCTCAAGCAACCATGAACTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCGATGTCTGACCAGAGAGGACTCATCATTGACGACCTCAGGGTCACGGGGGCGCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 4 (lower is better)
Translates to: AMSDQRGLIIDDLRVTGAHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...CGCCCCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCTGGTCAGACATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTGCCCCACTGCCAACTaGGGGGTGGGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIACPTAN*GVGPLF
Trigger: GAAGAGAGGTCCCACCCCTCAGTTGGCAGTGGGGCA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTAGCTGGCGGAAACGGTaGGGGCCCAGCTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTSWRKR*GPSCRA
Trigger: GGCACGGCAGCTGGGCCCTCACCGTTTCCGCCAGCT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCATGTGGCTAACAGGGTaGCACCAAGAGCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISMWLTG*HQEPRE
Trigger: CTCCCTGGGCTCTTGGTGTCACCCTGTTAGCCACAT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGCCACTGATGCAACCTaGGGTTCGCTGGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGATDAT*GSLAAL
Trigger: TAGTGCTGCCAGCGAACCTCAGGTTGCATCAGTGGC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGTGGTCAAGGCTGCCTaGACCCCCATCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGVVKAA*TPIQAQ
Trigger: CTGTGCCTGGATGGGGGTGCAGGCAGCCTTGACCAC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCAGCCGTGGTCAAGGCTaGCTGCACCCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETSRGQG*LHPHPG
Trigger: GCCTGGATGGGGGTGCAGGCAGCCTTGACCACGGCT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGAAGGTTCTTCTGGCTaGTGGAGAGTCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGEGSSG*WRVFQD
Trigger: GTCCTGGAAGACTCTCCAGCAGCCAGAAGAACCTTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGACCTCCTTGAAAGCTTaGCAAGCTAAGCATCAATTT +
Preference number: 4 (lower is better)
Translates to: AHGILGTFLADADLRAPLTSLKA*QAKHQF
Trigger: AAATTGATGCTTAGCTTGGCAAGCTTTCAAGGAGGT...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGAGGGCCCAGCTGCCGTaGCCCTCAACGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGRAQLP*PSTTLS
Trigger: TGACAGTGTCGTTGAGGGGCACGGCAGCTGGGCCCT...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGAAAGCCGTGGTTTCTaGTCTGCAGCCTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISESRGF*SAASPG
Trigger: CCCAGGTGAGGCTGCAGAGCAGAAACCACGGCTTTC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGCAACTACGCGGTTCGTaGCCGCGGCCACCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMQLRGS*PRPPGG
Trigger: CCCTCCGGGTGGCCGCGGCCACGAACCGCGTAGTTG...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCCATGGCCAAGAAGTTaGCGGCGCCCGCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILPWPRS*RRPRGT
Trigger: CGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGCAGGTTGTCTACCATaGCCAAGAAGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPAGCLP*PRSWRR
Trigger: GCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTCCAGATTAAGGCTTTaGCCTCCAATTTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLSRLRL*PPISNF
Trigger: GAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGCAGGCGCAGCAGCGTaGTGCCACTGTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETAGAAA*CHCPRW
Trigger: CCATCGTGGACAGTGGCACCACGCTGCTGCGCCTGC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCGCATCAAACACCTTCTaGGGCAGGCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLIASNTF*GRRSSV
Trigger: CACGCTGCTGCGCCTGCCCCAGAAGGTGTTTGATGC...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGCATCAAACACCTTCTaGGGCAGGCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNASNTF*GRRSSV
Trigger: CACGCTGCTGCGCCTGCCCCAGAAGGTGTTTGATGC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCGGCCGGCCCCCATCATaGGCTGAATGTAAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISGRPPS*AECKAE
Trigger: CTCAGCTTTACATTCAGCCCATGATGGGGGCCGGCC...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330333.11
CDS-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCAGCCCTCCATCACCGTaGCACCGATCACCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSPPSP*HRSPAH
Trigger: ATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACCTGCCAACTGAGGGGTaGGACCTCTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNLPTEG*DLSSGS
Trigger: GGAGCCAGAAGAGAGGTCCCACCCCTCAGTTGGCAG...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTCCTGGGGACGTTCTTaGCTGATGCGGACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSWGRS*LMRTSV
Trigger: CACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGTGCCCACGGCATCCTaGGGACGTTCTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDVPTAS*GRSWLM
Trigger: CATCAGCCAAGAACGTCCCCAGGATGCCGTGGGCAC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTGCTCCAGGACAAGATaGACCTTCCGGGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPCSRTR*TFRGRG
Trigger: TCCACGTCCCCGGAAGGTCCATCTTGTCCTGGAGCA...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp CCCAGAAGCCACTTTACCGGCCCCCTTTGGCCTCAGTaGCTTGACCCTCCCCTACAAATTTCCAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: PRSHFTGPLWPQ*LDPPLQISRCM
Trigger: CATGCACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTGGCTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAGCCTTTGGGGATGGTaGCGAGGTCTTCCCCAACGA +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPSLWGW*RGLPQR
Trigger: TCGTTGGGGAAGACCTCGTCACCATCCCCAAAGGCT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCTACATCCTCTGTTaGGAAAGGCCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPGYILC*ERPGNF
Trigger: GAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCC...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTGGCTCGCTCAAAGACTaGGCGGGGACACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIAGSLKD*AGTQLL
Trigger: CAGCAACTGTGTCCCCGCTCAGTCTTTGAGCGAGCC...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGAGAGGACTCATCATTaGCGACCTCAGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNERTHH*RPQGHG
Trigger: CCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTCCTGTACCACTTTaGCCCAGGTTGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFLPVPL*PRLRSG
Trigger: GCCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAG...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCAAAGGCCTCGATAAGTaGCAGAAAGTAGGGACTGCC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGKGLDK*QKVGTA
Trigger: GGCAGTCCCTACTTTCTGTCACTTATCGAGGCCTTT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTCTTCCAGGACACCATaGCAAGCCGACGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLSSRTP*QADVAS
Trigger: GGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGCCACTGATGCAACCTaGGGTTCGCTGGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNATDAT*GSLAAL
Trigger: TAGTGCTGCCAGCGAACCTCAGGTTGCATCAGTGGC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAAACGTTGGGGATGTTTaGTTGTGTCACCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPNVGDV*LCHQGV
Trigger: GACTCCCTGGTGACACAAGCAAACATCCCCAACGTT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCCCGGCTCCACACATCTaGATGGAGAAAACGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISPAPHI*MEKTLG
Trigger: CCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGG...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGIDPGC*PGNVIF
Trigger: GAAAATCACATTTCCAGGGCAGCAGCCGGGATCGAT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGAGCCGTGGTCAAGGCTaGCTGCACCCCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGSRGQG*LHPHPG
Trigger: GCCTGGATGGGGGTGCAGGCAGCCTTGACCACGGCT...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCTATGCCTGTTCATCTaGTGCAGGAGGAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGLCLFI*CRRKLP
Trigger: GGGGAGCTTCCTCCTGCAGCAGATGAACAGGCATAG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAGCAGGCGCAGCAGCGTaGTGCCACTGTCCACGATGG +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRAGAAA*CHCPRW
Trigger: CCATCGTGGACAGTGGCACCACGCTGCTGCGCCTGC...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGTCCAGCACGCCAGCTaGGACCCAGTCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGVQHAS*DPVQKP
Trigger: TGGTTTCTGGACTGGGTCCCAGCTGGCGTGCTGGAC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000330333.11
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFEIEDG*AQEKAP
Trigger: TGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTC...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCACCTCCTAGTGAATTCTaGCTCCCATTCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPPPSEF*LPFRAQ
Trigger: CTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGG...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAAGCCCTCCATCACCGTaGCACCGATCACCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRSPPSP*HRSPAH
Trigger: ATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCT...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTAAGCCCACCCTCTTCTaGGCTCTGTCGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFKPTLF*ALSKMT
Trigger: CGTCATCTTCGACAGAGCCCAGAAGAGGGTGGGCTT...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCAGGGAGCAGAGCAGATaGCTGAAACATCCACACGTA +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGREQSR*LKHPHV
Trigger: TACGTGTGGATGTTTCAGCCATCTGCTCTGCTCCCT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCACCTCTTTTCAGATTCTaGAACTTCCCAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPPLFRF*NFPGPS
Trigger: GCTGGGACCTGGGAAGTTCCAGAATCTGAAAAGAGG...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAAGGGAGCTCCTTTCCTaGAAGTCTCTGACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPRELLS*KSLTED
Trigger: GTCTTCTGTCAGAGACTTCCAGGAAAGGAGCTCCCT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCCTTCCTGTACCACTTTaGCCCAGGTTGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLILPVPL*PRLRSG
Trigger: GCCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAG...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp GGCAGCAGCAGCAGGACGATTAAGACAAGGAGGATGGCTCCACAGACGCTCATGAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GSSSRTIKTRRMAPQTLMRTLPG*CTVQHL
Trigger: CAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCT...CATGAGCGTCTGTGGAGCCATCCTCCTTGTCTTAATCGTCCTGCTGCTGCTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTTCTCAGTATGGTGGTaGCCCGGGGACCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGFSVWW*PGDPGS
Trigger: GCTCCCTGGGTCCCCGGGTCACCACCATACTGAGAA...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTTCTCAGGGCTGCCCTaGTTCCCAGAGGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLFSGLP*FPEERQ
Trigger: CTGTCTCTCCTCTGGGAATCAGGGCAGCCCTGAGAA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCCTATGCCTGTTCATCTaGTGCAGGAGGAAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPLCLFI*CRRKLP
Trigger: GGGGAGCTTCCTCCTGCAGCAGATGAACAGGCATAG...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAACCTGCCTGTGTCCTaGGTGGGCCTTGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLNLPVS*VGLEAS
Trigger: AGATGCCTCAAGGCCCACGCAGGACACAGGCAGGTT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACCCCGCACGTCGCTCTTaGCGTGGCTGGATTCAAATT +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDPARRS*RGWIQI
Trigger: AATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGG...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCCTCACTTCTCAGGGCTaGCCTGATTCCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPLTSQG*PDSQRR
Trigger: TCTCCTCTGGGAATCAGGGCAGCCCTGAGAAGTGAG...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATCCCGGGTCCCGGGGTaGGCGCAACTACGCGGTTCG +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSRVPG*AQLRGS
Trigger: CGAACCGCGTAGTTGCGCCCACCCCGGGACCCGGGA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGCATCAAACACCTTCTaGGGCAGGCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETASNTF*GRRSSV
Trigger: CACGCTGCTGCGCCTGCCCCAGAAGGTGTTTGATGC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGAGATTGAAGACGGGTaGGCACAGGAGAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDEIEDG*AQEKAP
Trigger: TGGCGCTTTCTCCTGTGCCCACCCGTCTTCAATCTC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACCACAAAAGGGGCCTGTaGCTCTGGTTCCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDHKRGL*LWFQVS
Trigger: TGAGACCTGGAACCAGAGCCACAGGCCCCTTTTGTG...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGCTTGAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACCCAGGCACAGGACCCTaGGCAAAGTCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CLRSGLAIHFQRCLTREDPGTGP*AKSQKR
Trigger: CCTCTTTTGAGACTTTGCCCAGGGTCCTGTGCCTGG...GTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTCAGTTCAGCACCTGTTaGGTCTTGGCTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPQFSTC*VLAVGM
Trigger: CATCCCAACAGCCAAGACCCAACAGGTGCTGAACTG...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGCCTCCACGTCTCTTTaGCAGAGTCCTATATTTCTC +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPASTSL*QSPIFL
Trigger: GAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGC...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTCATGACAAGCCGACGTaGCCTCCACGTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIAHDKPT*PPRLFG
Trigger: GCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATG...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGACATGACAAGCCGACGTaGCCTCCACGTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRHDKPT*PPRLFG
Trigger: GCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATG...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGGTTCTTCTGGCTGCTaGAGAGTCTTCCAGGACACC +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNGSSGC*RVFQDT
Trigger: GGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCCATAACTGGAGGAGGTaGGTGTCACTAACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGHNWRR*VSLTGF
Trigger: AAACCCTGTTAGTGACACCCACCTCCTCCAGTTATG...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGAACTGAACCACACGTaGCAGCTCCACCAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGELNHT*QLHQAG
Trigger: CCCTGCTTGGTGGAGCTGCCACGTGTGGTTCAGTTC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTGCTCCAGGACAAGATaGACCTTCCGGGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIACSRTR*TFRGRG
Trigger: TCCACGTCCCCGGAAGGTCCATCTTGTCCTGGAGCA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp ACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGTGGTCAAGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TCWVLAVGMIIL*GEGNSRGQGCL
Trigger: CAGGCAGCCTTGACCACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp GGCAAGGTCCTTCCAAGTGTTCAGAAGTGGAACCTGTaGTGGAAAAACACTCCCCTCGGTCACACACAGGGC +
Preference number: 4 (lower is better)
Translates to: GKVLPSVQKWNL*WKNTPLGHTQG
Trigger: GCCCTGTGTGTGACCGAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTGAACACTTGGAAGGACCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp CCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTaGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: PKHQGPGTRTSL*PWLDSNLSGSF
Trigger: AAAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCGTGTGTACTTCACTGTaGCGTCAAAGCCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPVCTSL*RQSPWS
Trigger: GCTCCAAGGGCTTTGACGTCACAGTGAAGTACACAC...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGTGTGTACTTCACTGTaGCGTCAAAGCCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNVCTSL*RQSPWS
Trigger: GCTCCAAGGGCTTTGACGTCACAGTGAAGTACACAC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGATTGTGATACGGAATaGCCTGCTGGAGTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPDCDTE*PAGVLV
Trigger: GACGAGAACTCCAGCAGGTCATTCCGTATCACAATC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000330333.11
CDS-3UTR TCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGATTGTGATACGGAATaGCCTGCTGGAGTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGDCDTE*PAGVLV
Trigger: GACGAGAACTCCAGCAGGTCATTCCGTATCACAATC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330333.11
CDS-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGGCTACATCCTCTGTTaGGAAAGGCCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPGYILC*ERPGNF
Trigger: GAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGACCCCAGGCCCCAGGCTaGTTCTCCTGCCATCATACT +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRPQAPG*FSCHHT
Trigger: AGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGG...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTGATAATTCTTTTGGGTaGGGGGAACAGCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFDNSFG*GEQPWS
Trigger: TGACCACGGCTGTTCCCCTCACCCAAAAGAATTATC...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCGTCCTGCGTGGGCCTTaGGGCATCTCTAGTTTGATT +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPVLRGP*GISSLI
Trigger: AATCAAACTAGAGATGCCTCAAGGCCCACGCAGGAC...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACAGCTGGCGGAAACGGTaGGGGCCCAGCTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNSWRKR*GPSCRA
Trigger: GGCACGGCAGCTGGGCCCTCACCGTTTCCGCCAGCT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCATTTCCTGGAAGTCTCTaGCAGAAGACATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPFPGSL*QKTFWR
Trigger: TCTCCAGAATGTCTTCTGTCAGAGACTTCCAGGAAA...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCATAGATTCCAGCCACTaGTGCAACCTGAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISIDSSH*CNLRFA
Trigger: AGCGAACCTCAGGTTGCATCAGTGGCTGGAATCTAT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGGCGCAGCAGCGTGGTaGCACTGTCCACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSGAAAW*HCPRWP
Trigger: AGGCCATCGTGGACAGTGGCACCACGCTGCTGCGCC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTGCACAGGGGCTCGCTaGGAAGCCCACCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMCTGAR*EAHPLL
Trigger: CAGAAGAGGGTGGGCTTCGCAGCGAGCCCCTGTGCA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGAGGGCCCAGCTGCCGTaGCCCTCAACGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMRAQLP*PSTTLS
Trigger: TGACAGTGTCGTTGAGGGGCACGGCAGCTGGGCCCT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGCCGTGGTTTCTGCTCTaGAGCCTCACCTGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGPWFLL*SLTWGA
Trigger: AGCTCCCCAGGTGAGGCTGCAGAGCAGAAACCACGG...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAACACAATCCACAAAATaGGCTCGCTCAAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPTQSTK*ARSKTE
Trigger: CTCAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGACTCAAGGGTACAGCTTaGTTACATCCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRLKGTA*LHPQAP
Trigger: TGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAG...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCACAAAAGGGGCCTGTaGCTCTGGTTCCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLHKRGL*LWFQVS
Trigger: TGAGACCTGGAACCAGAGCCACAGGCCCCTTTTGTG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCCAGGCACAGGACCCTaGGCAAAGTCTCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLPGTGP*AKSQKR
Trigger: CCTCTTTTGAGACTTTGCCCAGGGTCCTGTGCCTGG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACCAGTTCAGCACCTGTTaGGTCTTGGCTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNQFSTC*VLAVGM
Trigger: CATCCCAACAGCCAAGACCCAACAGGTGCTGAACTG...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTTCCTTCCCTGACAGCTaGTCAGAAATAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFSFPDS*SEIGAS
Trigger: TGATGCCCCTATTTCTGACCAGCTGTCAGGGAAGGA...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTAGGGAGCAGAGCAGATaGCTGAAACATCCACACGTA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFREQSR*LKHPHV
Trigger: TACGTGTGGATGTTTCAGCCATCTGCTCTGCTCCCT...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTACTGTGCCAAAAACGTaGGGTGAAATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGTVPKT*GEMRCP
Trigger: TGGGCACCTCATTTCACCCCACGTTTTTGGCACAGT...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp GACACCATGACAAGCCGACGTGGCCTCCACGTCTCTTaGGCAGAGTCCTATATTTCTCAGTATGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: DTMTSRRGLHVS*AESYISQYGGD
Trigger: GTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCCACGTCGGCTTGTCATGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGGAGAGGACTCATCATTaGCGACCTCAGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGERTHH*RPQGHG
Trigger: CCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTC...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETEQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCCCCAGGCCCCAGGCTaGTTCTCCTGCCATCATACT +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILPQAPG*FSCHHT
Trigger: AGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CATGAGCGCATAGGACACAATCCACAAAATGGGCTCGCTCAAAGACTGAGCGGGTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: HERIGHNPQNGLAQRLSGFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...CCCGCTCAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDRTLPG*CTVQHL
Trigger: CAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCT...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACTGCATCTTCCTTCCCTaGCAGCTGGTCAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDCIFLP*QLVRNR
Trigger: CCTATTTCTGACCAGCTGTCAGGGAAGGAAGATGCA...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACATGCAAAGGGAACACTaGACTTGGCACACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNMQREH*TWHTSR
Trigger: CCTGCTTGTGTGCCAAGTTCAGTGTTCCCTTTGCAT...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAAAAAAGCCAATGGGATaGGAATTGGACTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPKKPMG*ELDFQT
Trigger: TGTCTGGAAGTCCAATTCTCATCCCATTGGCTTTTT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGAAGCTCCCCGCCTCTaGAACCTAACACAATACAAC +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNEAPRL*NLTQYN
Trigger: GTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACCTCTGTGTTTCACCATaGATCAGGCAAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDLCVSP*IRQGPS
Trigger: GGAAGGACCTTGCCTGATTCATGGTGAAACACAGAG...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGATCTCCATCCGTTGAATaGACCAATCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRSPSVE*TNPCSA
Trigger: CGCGGAGCAAGGATTGGTTCATTCAACGGATGGAGA...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGAGGCATCTCTAGTTTaGTTAGGACAGACGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGEASLV*LGQTCF
Trigger: AAAACACGTCTGTCCTAATCAAACTAGAGATGCCTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTATCAGGAAGCTTTGTaGTGTCTCTTGGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPYQEAL*CLLAQS
Trigger: TGACTGGGCCAAGAGACATCACAAAGCTTCCTGATA...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCTTGATACCACGAAAGTaGCAGCTGTGCCCAACTTAC +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISLIPRK*QLCPTY
Trigger: GTAAGTTGGGCACAGCTGTCACTTTCGTGGTATCAA...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTTCAGGGAACTTGCAATaGCCTCCACATATAGCACTC +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFSGNLQ*PPHIAL
Trigger: GAGTGCTATATGTGGAGGTCATTGCAAGTTCCCTGA...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAGTCGGATGTTCGGAATaGATGGGCTGGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRVGCSE*MGWAGS
Trigger: TGAGCCAGCCCAGCCCATGCATTCCGAACATCCGAC...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCATCTGTAAAGGGAACTaGTCACTTCTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATICKGN*SLLRAA
Trigger: GGCAGCCCTGAGAAGTGAGCAGTTCCCTTTACAGAT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTATGGCTTGGCAAGTGTaGCATAAGCTAGGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFMAWQV*HKLGQV
Trigger: TACTTGGCCTAGCTTATGCCACACTTGCCAAGCCAT...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTATGGCTTGGCAAGTGTaGCATAAGCTAGGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPMAWQV*HKLGQV
Trigger: TACTTGGCCTAGCTTATGCCACACTTGCCAAGCCAT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCTGCCACTGTCCACGATaGCCTTGTCTGCGTTATACT +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLICHCPR*PCLRYT
Trigger: AGTATAACGCAGACAAGGCCATCGTGGACAGTGGCA...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGTCCAGCACGCCAGCTaGGACCCAGTCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILVQHAS*DPVQKP
Trigger: TGGTTTCTGGACTGGGTCCCAGCTGGCGTGCTGGAC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000330333.11
CDS-3UTR CCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCTACGGAATGACCTGCTaGAGTTCTCGTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLIYGMTC*SSRLSG
Trigger: ACCTGAGAGACGAGAACTCCAGCAGGTCATTCCGTA...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCAAGCCCACCCTCTTCTaGGCTCTGTCGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETKPTLF*ALSKMT
Trigger: CGTCATCTTCGACAGAGCCCAGAAGAGGGTGGGCTT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGTGCCCACGGCATCCTaGGGACGTTCTTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILVPTAS*GRSWLM
Trigger: CATCAGCCAAGAACGTCCCCAGGATGCCGTGGGCAC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGACGTGTTTTACACATaGCTGTCAAGCAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGDVFYT*LSSKFL
Trigger: GAGAAACTTGCTTGACAGCCATGTGTAAAACACGTC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGAGCCTTTGGGGATGGTaGCGAGGTCTTCCCCAACGA +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMSLWGW*RGLPQR
Trigger: TCGTTGGGGAAGACCTCGTCACCATCCCCAAAGGCT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGACTCCACAGACGCTCATaGGCGCATAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRLHRRS*AHRTQS
Trigger: GGATTGTGTCCTATGCGCTCATGAGCGTCTGTGGAG...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCATTTCCAGCGATGTCTaGCCAGAGAGGACTCATCAT +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPISSDV*PERTHH
Trigger: ATGATGAGTCCTCTCTGGTCAGACATCGCTGGAAAT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACGCTCATGAGCGCATAGGACACAATCCACAAAATGGGCTCGCTCAAAGACTGGATAATTCTTTTGGGTaGGGGGAACAGCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: DAHERIGHNPQNGLAQRLDNSFG*GEQPWS
Trigger: TGACCACGGCTGTTCCCCTCACCCAAAAGAATTATC...CAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATGAGCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATCTTCCAGGACACCATaGCAAGCCGACGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLESSRTP*QADVAS
Trigger: GGAGGCCACGTCGGCTTGTCATGGTGTCCTGGAAGA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCTCACTAACAGGGTTTTaGCTGGAAGTCCGATTCTCA +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISSLTGF*LEVRFS
Trigger: TGAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGA...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGAGCCTGCTCACGTCTaGAAGCCGTGGTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILEPAHV*KPWFLL
Trigger: GAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACTATCAGGAAGCTTTGTaGTGTCTCTTGGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDYQEAL*CLLAQS
Trigger: TGACTGGGCCAAGAGACATCACAAAGCTTCCTGATA...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACTCAGGGAACTTGCAATaGCCTCCACATATAGCACTC +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDSGNLQ*PPHIAL
Trigger: GAGTGCTATATGTGGAGGTCATTGCAAGTTCCCTGA...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGGCGCAGCAGCGTGGTaGCACTGTCCACGATGGCCT +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESGAAAW*HCPRWP
Trigger: AGGCCATCGTGGACAGTGGCACCACGCTGCTGCGCC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGIDPGC*PGNVIF
Trigger: GAAAATCACATTTCCAGGGCAGCAGCCGGGATCGAT...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTTGGCTTCACTCCTGTaGAAAGCGGCCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLLASLL*KAAHKT
Trigger: TGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGGCTCCTTCTTGCCCTaGCCTCTTTTCAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETGSFLP*PLFRFW
Trigger: CCAGAATCTGAAAAGAGGGCAGGGCAAGAAGGAGCC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTAACCTGCCTGTGTCCTaGGTGGGCCTTGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTNLPVS*VGLEAS
Trigger: AGATGCCTCAAGGCCCACGCAGGACACAGGCAGGTT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTTCCCTGTTCCCTCCTaGACTGACCCTGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMFPVPS*TDPEWG
Trigger: GCCCCATTCAGGGTCAGTGCAGGAGGGAACAGGGAA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACTGTCAAAGGCTAGGTTaGCAAGGACACCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDCQRLG*QGHPRF
Trigger: AAACCTTGGGTGTCCTTGGCAACCTAGCCTTTGACA...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCAACTACGCGGTTCGTaGCCGCGGCCACCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSQLRGS*PRPPGG
Trigger: CCCTCCGGGTGGCCGCGGCCACGAACCGCGTAGTTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGCAGGTTGTCTACCATaGCCAAGAAGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILAGCLP*PRSWRR
Trigger: GCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCGCCTCCACGTCTCTTTaGCAGAGTCCTATATTTCTC +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATASTSL*QSPIFL
Trigger: GAGAAATATAGGACTCTGCCAAAGAGACGTGGAGGC...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCACGGAAAAAGCCAATaGGATGAGAATTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGHGKSQ*DENWTS
Trigger: GGAAGTCCAATTCTCATCCCATTGGCTTTTTCCGTG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAGCCTCCAGAGTAGCTaGGATTACAGACAGGCATCA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLSLQSS*DYRQAS
Trigger: TGATGCCTGTCTGTAATCCCAGCTACTCTGGAGGCT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCCTCTTTTCAGATTCTaGAACTTCCCAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLPLFRF*NFPGPS
Trigger: GCTGGGACCTGGGAAGTTCCAGAATCTGAAAAGAGG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCGCTCTTGCCGTGGCTaGATTCAAATTTATCAGGAA +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFRSCRG*IQIYQE
Trigger: TTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCG...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp CTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGGCGGAAAATAACCTCA +
Preference number: 4 (lower is better)
Translates to: LLPSYCKPSCTT*TQVEVWRKITS
Trigger: TGAGGTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGGTCTCCAGAGAACTTaGTGGCTTGGCAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILGLQRT*WLGKCG
Trigger: GCCACACTTGCCAAGCCATCAAGTTCTCTGGAGACC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACGCTCATGAGCGCATAGGACACAATCCACAAAATGGGCTCGCTCAAAGACTGATTTCCAGCGATGTCTaGCCAGAGAGGACTCATCAT +
Preference number: 4 (lower is better)
Translates to: DAHERIGHNPQNGLAQRLISSDV*PERTHH
Trigger: ATGATGAGTCCTCTCTGGTCAGACATCGCTGGAAAT...CAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGTCCTATGCGCTCATGAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCCACATGACTCCCGCTTaGATATTCCTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPHMTPA*IFLKFG
Trigger: TCCAAACTTCAGGAATATTCAAGCGGGAGTCATGTG...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGCTGTCACTTACACATaGCTCCCGCTTGAATATTCC +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGAVTYT*LPLEYS
Trigger: GGAATATTCAAGCGGGAGTCATGTGTAAGTGACAGC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTGTACTCTCCATCCGTTaGATGAACCAATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIAVLSIR*MNQSLL
Trigger: GAGCAAGGATTGGTTCATTCAACGGATGGAGAGTAC...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTGCCCCACTGCCAACTaGGGGGTGGGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNCPTAN*GVGPLF
Trigger: GAAGAGAGGTCCCACCCCTCAGTTGGCAGTGGGGCA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCACGATGGCCTTGTCTaGGTTATACTCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETHDGLV*VILSAV
Trigger: GACTGCAGAGAGTATAACGCAGACAAGGCCATCGTG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACTACAAACGATACTTCTaGAGGAGGGGACACTTAGCA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDYKRYF*RRGHLA
Trigger: TGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTA...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGCCTCCTCCCGTTCCGTaGCGTCATGTTCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMPPPVP*RHVLSK
Trigger: CTTGGAAAGAACATGACGGCACGGAACGGGAGGAGG...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGACACTGTCAGGTAACTaGTGCCAGGAGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGTLSGN*CQEPSR
Trigger: TCTGGAAGGCTCCTGGCAGCAGTTACCTGACAGTGT...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGAAAGCCGTGGTTTCTaGTCTGCAGCCTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSESRGF*SAASPG
Trigger: CCCAGGTGAGGCTGCAGAGCAGAAACCACGGCTTTC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGTGTCAAAGGCTAGGTTaGCAAGGACACCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGCQRLG*QGHPRF
Trigger: AAACCTTGGGTGTCCTTGGCAACCTAGCCTTTGACA...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACATCTCATTCATTCGCTaGCCTCTCATATGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDISFIR*PLICAE
Trigger: CTCAGCACATATGAGAGGGCAGCGAATGAATGAGAT...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCAGTTTGCAGCTCTCCTaGCAGAAGCAAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSLQLS*QKQNTD
Trigger: GTCAGTATTTTGCTTCTGGCAGGAGAGCTGCAAACT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAATGTAAAGCAGAGATaGGCGGGCCACAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRNVKQR*AGHSFH
Trigger: GTGGAAGCTGTGGCCCGCGCATCTCTGCTTTACATT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCAACTACGCGGTTCGTaGCCGCGGCCACCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWQLRGS*PRPPGG
Trigger: CCCTCCGGGTGGCCGCGGCCACGAACCGCGTAGTTG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGCAGGTTGTCTACCATaGCCAAGAAGTTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSAGCLP*PRSWRR
Trigger: GCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCGAGAACTTGATGGCTTaGCAAGTGTGGCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLIENLMA*QVWHKL
Trigger: TAGCTTATGCCACACTTGCCAAGCCATCAAGTTCTC...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CCA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGAGAACTTGATGGCTTaGCAAGTGTGGCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: PQADSPAIILQAFLYHFDENLMA*QVWHKL
Trigger: TAGCTTATGCCACACTTGCCAAGCCATCAAGTTCTC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACGCATGGAGAAAACGTTaGGGATGTTTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNAWRKR*GCLLVS
Trigger: TGACACAAGCAAACATCCCCAACGTTTTCTCCATGC...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCACCATCAGAGAATTCTaGAATCAGAGATGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETTIREF*NQRCAG
Trigger: GCCCGCGCATCTCTGATTCCAGAATTCTCTGATGGT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000330333.11
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAACCCAGGTTGAGGTCTaGCGGAAAATAACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRTQVEV*RKITSK
Trigger: CTTTGAGGTTATTTTCCGCCAGACCTCAACCTGGGT...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCCAATGGGATGAGAATTaGACTTCCAGACATCTCTCC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPQWDEN*TSRHLS
Trigger: GGAGAGATGTCTGGAAGTCCAATTCTCATCCCATTG...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCCAAGTGTTCAGAAGTaGAACCTGTTGTGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGPSVQK*NLLWKN
Trigger: GTTTTTCCACAACAGGTTCCACTTCTGAACACTTGG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCTGCCAACTGAGGGGTaGGACCTCTCTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITLPTEG*DLSSGS
Trigger: GGAGCCAGAAGAGAGGTCCCACCCCTCAGTTGGCAG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTGCACTGACCCTGAATaGGGCTGGGTGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITCTDPE*GWVCSR
Trigger: CCTGGAGCACACCCAGCCCCATTCAGGGTCAGTGCA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCACGTCGCTCTTGCCGTaGCTGGATTCAAATTTATCA +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPTSLLP*LDSNLS
Trigger: TGATAAATTTGAATCCAGCCACGGCAAGAGCGACGT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp TTCCTGGTTGATGCACAGTTCAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATTCTTTTGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FLVDAQFSTCWV*AVGMIILLGEG
Trigger: CCCCTCACCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGCACTTTGACCCAGGTTaGGGTCTGGCGGAAAATAAC +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGHFDPG*GLAENN
Trigger: GTTATTTTCCGCCAGACCTCAACCTGGGTCAAAGTG...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCACACGTAGCCTACTGTaGATACAAACGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATTRSLL*IQTILL
Trigger: CAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAGAAGCTCCCCGCCTCTaGAACCTAACACAATACAAC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKREAPRL*NLTQYN
Trigger: GTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTC...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGGGGACGTTCTTGGCTaGTGCGGACCTCCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWGDVLG*CGPPCP
Trigger: GGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCGAGGCATCTCTAGTTTaGTTAGGACAGACGTGTTTT +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATEASLV*LGQTCF
Trigger: AAAACACGTCTGTCCTAATCAAACTAGAGATGCCTC...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAATAGATTCCAGCCACTaGTGCAACCTGAGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQIDSSH*CNLRFA
Trigger: AGCGAACCTCAGGTTGCATCAGTGGCTGGAATCTAT...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTTTTCTAGCCTTTTATTaGTACCACGAAAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGFLAFY*YHESDS
Trigger: GCTGTCACTTTCGTGGTATCAATAAAAGGCTAGAAA...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTACACTTCCCTGCTTATaGTATTCTTATCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPTLPCL*YSYLSV
Trigger: CACAGACAGATAAGAATATCATAAGCAGGGAAGTGT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTAGACACTGCAGCACCTaGAATTTCTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTRHCST*NFCTGA
Trigger: AGCCCCTGTGCAGAAATTGCAGGTGCTGCAGTGTCT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTCTGATTGGATGGGTATaGTTGAGGCTAACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIALIGWV*LRLTSS
Trigger: AGAACTGGTTAGCCTCAAGCATACCCATCCAATCAG...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCAACGGAACAGAAGATaGCTGTATGAAGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFQRNRR*LYEEIS
Trigger: GCTTATTTCTTCATACAGGCATCTTCTGTTCCGTTG...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAACCTAATGCTAAGTTaGACCTTTTCAGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPNLMLS*TFSGKD
Trigger: GTCCTTGCCTGAAAAGGTGCAACTTAGCATTAGGTT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTATTACCCAAAGCACTaGGGAGTCACTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLYYPKH*GVTNAV
Trigger: GACAGCATTAGTGACTCCGCAGTGCTTTGGGTAATA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAAGCTCACTACAACCTCTaGCTCCCCGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEAHYNL*LPGSSD
Trigger: ATCGCTTGAACCGGGGAGGCAGAGGTTGTAGTGAGC...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGGCTCCTTCTTGCCCTaGCCTCTTTTCAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILGSFLP*PLFRFW
Trigger: CCAGAATCTGAAAAGAGGGCAGGGCAAGAAGGAGCC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTACACTGTCAGGTAACTaGTGCCAGGAGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTTLSGN*CQEPSR
Trigger: TCTGGAAGGCTCCTGGCAGCAGTTACCTGACAGTGT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACAGAGCCCAGGGAGCCTaGTCACGTCTGAAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNRAQGA*SRLKAV
Trigger: CACGGCTTTCAGACGTGAGCAGGCTCCCTGGGCTCT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCAGACACCAGGATGGCTaGTCTCACAATAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETRHQDG*SHNSVQ
Trigger: TTGGACACTATTGTGAGAGCAGCCATCCTGGTGTCT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAACTCACTTCTCAGGGCTaGCCTGATTCCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLELTSQG*PDSQRR
Trigger: TCTCCTCTGGGAATCAGGGCAGCCCTGAGAAGTGAG...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCTCCACACATCTGCATaGAGAAAACGTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETLHTSA*RKRWGC
Trigger: ACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAACAAGACTACCTCCGTTaGTCCCAGATCCAGCAACGG +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEQDYLR*SQIQQR
Trigger: CCGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTG...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGAGGGGCCTGTGGCTCTaGTTCCAGGTCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITRGLWL*FQVSRV
Trigger: TACCCTTGAGACCTGGAACCAGAGCCACAGGCCCCT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGCCTCCTAGTGAATTCTaGCTCCCATTCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGPPSEF*LPFRAQ
Trigger: CTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGG...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTTGGGTCTTGGCTGTTaGGATGATAATTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATLGLGC*DDNSFG
Trigger: CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATCCTTCCCTGACAGCTaGTCAGAAATAGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSFPDS*SEIGAS
Trigger: TGATGCCCCTATTTCTGACCAGCTGTCAGGGAAGGA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGGTTCTTCTGGCTGCTaGAGAGTCTTCCAGGACACC +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSGSSGC*RVFQDT
Trigger: GGTGTCCTGGAAGACTCTCCAGCAGCCAGAAGAACC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAACACAGAAGGTTCTTCTaGCTGCTGGAGAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQHRRFF*LLESLP
Trigger: TGGAAGACTCTCCAGCAGCCAGAAGAACCTTCTGTG...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCAATGGGATGAGAATTaGACTTCCAGACATCTCTCC +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLQWDEN*TSRHLS
Trigger: GGAGAGATGTCTGGAAGTCCAATTCTCATCCCATTG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAAGCCTCCAGAGTAGCTaGGATTACAGACAGGCATCA +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQSLQSS*DYRQAS
Trigger: TGATGCCTGTCTGTAATCCCAGCTACTCTGGAGGCT...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCGACGTGTTTTACACATaGCTGTCAAGCAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPDVFYT*LSSKFL
Trigger: GAGAAACTTGCTTGACAGCCATGTGTAAAACACGTC...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATTTACCGGCCCCCTTTaGCCTCAGTTGCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEFTGPL*PQLLDP
Trigger: AGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCTTTGTGATGTCTCTTaGCCCAGTCACTACCCACGG +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTLCDVS*PSHYPR
Trigger: CCGTGGGTAGTGACTGGGCCAAGAGACATCACAAAG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTACGTCGCTCTTGCCGTaGCTGGATTCAAATTTATCA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLTSLLP*LDSNLS
Trigger: TGATAAATTTGAATCCAGCCACGGCAAGAGCGACGT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAATATTTTACTCAGATaGCTATGTGTGAGGCACACG +
Preference number: 4 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISNILLR*LCVRHT
Trigger: CGTGTGCCTCACACATAGCCATCTGAGTAAAATATT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGAGCAGAACAGAGATTaGAGACGGGTGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKEQNRD*RRVGTG
Trigger: TCCTGTGCCCACCCGTCTTCAATCTCTGTTCTGCTC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGAAGTAGGGAGGATTTaGAAGCTTGAAAATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPEVGRI*KLENQE
Trigger: TTCTTGATTTTCAAGCTTTCAAATCCTCCCTACTTC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACTTCCTGTACCACTTTaGCCCAGGTTGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLPVPL*PRLRSG
Trigger: GCCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTAGAACTCTTCCTGGTTaGTGCACAGTTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILRTLPG*CTVQHL
Trigger: CAGGTGCTGAACTGTGCATCAACCAGGAAGAGTTCT...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCTCTGTGTTTCACCATaGATCAGGCAAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTLCVSP*IRQGPS
Trigger: GGAAGGACCTTGCCTGATTCATGGTGAAACACAGAG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTACGATTTATTCCCAATaGTATCGAGTGGCACTAGTC +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLTIYSQ*YRVALV
Trigger: GACTAGTGCCACTCGATATCATTGGGAATAAATCGT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCAAACGTGGGGTGAAATaGGGTGCCCACGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESKRGVK*GAHGIL
Trigger: CAGGATGCCGTGGGCACCTCATTTCACCCCACGTTT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGAGCCTGCTCACGTCTaGAAGCCGTGGTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESEPAHV*KPWFLL
Trigger: GAGCAGAAACCACGGCTTTCAGACGTGAGCAGGCTC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCCCTCTCATATGTGCTaGGTAACTGCTACACAGAAT +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETPSHMC*VTATQN
Trigger: ATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTAACGTTGGGGATGTTTaGTTGTGTCACCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILNVGDV*LCHQGV
Trigger: GACTCCCTGGTGACACAAGCAAACATCCCCAACGTT...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGATTGTGGATGGGGAAATaGCGAATCGGTAACATTCAT +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRLWMGK*RIGNIH
Trigger: ATGAATGTTACCGATTCGGCATTTCCCCATCCACAA...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGGAGGCTAACCAGTTCTaGAAAGGGAAACACACGGTT +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGEANQF*KGKHTV
Trigger: AACCGTGTGTTTCCCTTTGCAGAACTGGTTAGCCTC...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTTGGCTTCACTCCTGTaGAAAGCGGCCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTLASLL*KAAHKT
Trigger: TGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCTATTACCCAAAGCACTaGGGAGTCACTAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETYYPKH*GVTNAV
Trigger: GACAGCATTAGTGACTCCGCAGTGCTTTGGGTAATA...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGCATGGAGAAAACGTTaGGGATGTTTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETAWRKR*GCLLVS
Trigger: TGACACAAGCAAACATCCCCAACGTTTTCTCCATGC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCAAGACTACCTCCGTTaGTCCCAGATCCAGCAACGG +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITQDYLR*SQIQQR
Trigger: CCGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGACCATCAGAGAATTCTaGAATCAGAGATGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMTIREF*NQRCAG
Trigger: GCCCGCGCATCTCTGATTCCAGAATTCTCTGATGGT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000330333.11
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCTCAAGGGTACAGCTTaGTTACATCCCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITLKGTA*LHPQAP
Trigger: TGGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCAGGGGCCTGTGGCTCTaGTTCCAGGTCTCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESRGLWL*FQVSRV
Trigger: TACCCTTGAGACCTGGAACCAGAGCCACAGGCCCCT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGATTGGGTCTTGGCTGTTaGGATGATAATTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRLGLGC*DDNSFG
Trigger: CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAA...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCAGCGCATTTGTGGATaGGGAAATGCCGAATCGGTA +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILQRICG*GNAESV
Trigger: TACCGATTCGGCATTTCCCCATCCACAAATGCGCTG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTATCAATTTGCATAACTaGAGGAGGTGGGTGTCACTA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLINLHN*RRWVSL
Trigger: TAGTGACACCCACCTCCTCCAGTTATGCAAATTGAT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTTTACCGGCCCCCTTTaGCCTCAGTTGCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITFTGPL*PQLLDP
Trigger: AGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAATATTTTACTCAGATaGCTATGTGTGAGGCACACG +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPNILLR*LCVRHT
Trigger: CGTGTGCCTCACACATAGCCATCTGAGTAAAATATT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTATTTCCAGCGATGTCTaGCCAGAGAGGACTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTISSDV*PERTHH
Trigger: ATGATGAGTCCTCTCTGGTCAGACATCGCTGGAAAT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCGAAGTAGGGAGGATTTaGAAGCTTGAAAATCAAGAA +
Preference number: 4 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLIEVGRI*KLENQE
Trigger: TTCTTGATTTTCAAGCTTTCAAATCCTCCCTACTTC...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGACAGAAGATGCCTGTATaGAGAAATAAGCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRQKMPV*RNKQEN
Trigger: GTTTTCCTGCTTATTTCTTCATACAGGCATCTTCTG...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCATGAAATACAGAGCATaGCGGCAAACTTCATTCACC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETMKYRA*RQTSFT
Trigger: GGTGAATGAAGTTTGCCGTCATGCTCTGTATTTCAT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTTGATACCACGAAAGTaGCAGCTGTGCCCAACTTAC +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMLIPRK*QLCPTY
Trigger: GTAAGTTGGGCACAGCTGTCACTTTCGTGGTATCAA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAAACGTTGGGGATGTTTaGTTGTGTCACCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSNVGDV*LCHQGV
Trigger: GACTCCCTGGTGACACAAGCAAACATCCCCAACGTT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCCGGCTCCACACATCTaGATGGAGAAAACGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESPAPHI*MEKTLG
Trigger: CCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTACAAACGATACTTCTaGAGGAGGGGACACTTAGCA +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGYKRYF*RRGHLA
Trigger: TGCTAAGTGTCCCCTCCTGCAGAAGTATCGTTTGTA...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGAAGGTTCTTCTGGCTaGTGGAGAGTCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKEGSSG*WRVFQD
Trigger: GTCCTGGAAGACTCTCCAGCAGCCAGAAGAACCTTC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCATAGTGTACAGTATATaGTGGGAGATCGGACACCAA +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETIVYSI*WEIGHQ
Trigger: TTGGTGTCCGATCTCCCAGCATATACTGTACACTAT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGCTCACTACAACCTCTaGCTCCCCGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESAHYNL*LPGSSD
Trigger: ATCGCTTGAACCGGGGAGGCAGAGGTTGTAGTGAGC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCACTTCTGGCTCCTTCTTaGCCTGCCCTCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSLLAPS*PALFSD
Trigger: ATCTGAAAAGAGGGCAGGGCAAGAAGGAGCCAGAAG...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTGGGGTGAAATGAGGTaGCCACGGCATCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSWGEMR*PRHPGD
Trigger: GTCCCCAGGATGCCGTGGGCACCTCATTTCACCCCA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAAGGGAGCTTACTGAAATaGAGATTCCCTGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEGSLLK*RFPVPS
Trigger: GGAGGGAACAGGGAATCTGCATTTCAGTAAGCTCCC...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTATGGCTTGGCAAGTGTaGCATAAGCTAGGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTMAWQV*HKLGQV
Trigger: TACTTGGCCTAGCTTATGCCACACTTGCCAAGCCAT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGGAGAACTTGATGGCTTaGCAAGTGTGGCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGENLMA*QVWHKL
Trigger: TAGCTTATGCCACACTTGCCAAGCCATCAAGTTCTC...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTCTCCACACATCTGCATaGAGAAAACGTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILLHTSA*RKRWGC
Trigger: ACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAG...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGATCCAGATTAAGGCTTTaGCCTCCAATTTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRSRLRL*PPISNF
Trigger: GAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGA...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCACAAAAGGGGCCTGTaGCTCTGGTTCCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESHKRGL*LWFQVS
Trigger: TGAGACCTGGAACCAGAGCCACAGGCCCCTTTTGTG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTTCACCTACTCTACCTaGAAACCTCACTTGTTACTT +
Preference number: 4 (lower is better)
Translates to: SATIDPGCCPGNVIFLIAFTYST*KPHLLL
Trigger: AAGTAACAAGTGAGGTTTCCAGGTAGAGTAGGTGAA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTAATTACTGTTGTTTGTaGAACAGACTGTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPNYCCL*NRLLNN
Trigger: GTTGTTCAACAGTCTGTTCCACAAACAACAGTAATT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGCAAGAGAAAACACATaGGGATTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRARENT*GFHSII
Trigger: AATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGC...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGCAAGAGAAAACACATaGGGATTCCACTCCATTATT +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGARENT*GFHSII
Trigger: AATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTCTGAGGCAGGATTGTaGTACGGAATGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNSEAGL*YGMTCW
Trigger: CCAGCAGGTCATTCCGTATCACAATCCTGCCTCAGA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR TCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTTCAGAAGAGGCTTGTaGGGACCATCGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITFRRGL*GPSVDD
Trigger: GTCATCAACCGATGGTCCTCACAAGCCTCTTCTGAA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGATAATTCTTTTGGGTaGGGGGAACAGCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKDNSFG*GEQPWS
Trigger: TGACCACGGCTGTTCCCCTCACCCAAAAGAATTATC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGTGCATTCTGAGATTATaGGTTTTCAACAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGCILRL*VFNKLR
Trigger: TCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCA...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGAAAAAGCCAATGGGATaGGAATTGGACTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGKKPMG*ELDFQT
Trigger: TGTCTGGAAGTCCAATTCTCATCCCATTGGCTTTTT...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATTTTCACAGCAAGGGTaGAGGCACAATCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKFSQQG*RHNLGV
Trigger: CACCCCTAGATTGTGCCTTCACCCTTGCTGTGAAAA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTTTTCACAGCAAGGGTaGAGGCACAATCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITFSQQG*RHNLGV
Trigger: CACCCCTAGATTGTGCCTTCACCCTTGCTGTGAAAA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGATGAAATACAGAGCATaGCGGCAAACTTCATTCACC +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGMKYRA*RQTSFT
Trigger: GGTGAATGAAGTTTGCCGTCATGCTCTGTATTTCAT...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTCACTAACAGGGTTTTaGCTGGAAGTCCGATTCTCA +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTSLTGF*LEVRFS
Trigger: TGAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTAATGGTTTCAGTTACTaGAGGCAGGATTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLNGFSY*RQDLFQ
Trigger: CTGAAATAAATCCTGCCTTCAGTAACTGAAACCATT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTCTACTTTCACAATTTTaGACAGTAACTGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLLLSQF*TVTDPK
Trigger: TTTGGGGTCAGTTACTGTTCAAAATTGTGAAAGTAG...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACGTCCTGCGTGGGCCTTaGGGCATCTCTAGTTTGATT +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNVLRGP*GISSLI
Trigger: AATCAAACTAGAGATGCCTCAAGGCCCACGCAGGAC...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATTGGCCTCAGTTGCTTaGCCCTCCCCTACAAATTTC +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLASVA*PSPTNF
Trigger: GAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGATCGATCCCGGCTGCTaGCCTGGAAATGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITIDPGC*PGNVIF
Trigger: GAAAATCACATTTCCAGGGCAGCAGCCGGGATCGAT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGAACCCCATAGAGCCTaGAGCCCAATCCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESEPHRA*SPIHSV
Trigger: AACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACAGACACTGCAGCACCTaGAATTTCTGCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNRHCST*NFCTGA
Trigger: AGCCCCTGTGCAGAAATTGCAGGTGCTGCAGTGTCT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTTCCCTGTTCCCTCCTaGACTGACCCTGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSFPVPS*TDPEWG
Trigger: GCCCCATTCAGGGTCAGTGCAGGAGGGAACAGGGAA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGGGAGCTTACTGAAATaGAGATTCCCTGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKGSLLK*RFPVPS
Trigger: GGAGGGAACAGGGAATCTGCATTTCAGTAAGCTCCC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGAGCGTGGCTATGTTCTaGCTTCCACATTCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITSVAMF*LPHSAD
Trigger: ATCTGCGGAATGTGGAAGGCAGAACATAGCCACGCT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTCACTACCCACGGTGTaGTTTTTAAGCACACAAGTG +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTSLPTV*FLSTQV
Trigger: CACTTGTGTGCTTAAAAAGCACACCGTGGGTAGTGA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTGCATGGAGAAAACGTTaGGGATGTTTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILAWRKR*GCLLVS
Trigger: TGACACAAGCAAACATCCCCAACGTTTTCTCCATGC...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATACGGAATGACCTGCTaGAGTTCTCGTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKYGMTC*SSRLSG
Trigger: ACCTGAGAGACGAGAACTCCAGCAGGTCATTCCGTA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330333.11
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTCCCGGCTGCTGCCCTaGAAATGTGATTTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMSRLLP*KCDFLN
Trigger: ATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACCTCCTAGTGAATTCTaGCTCCCATTCAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKPPSEF*LPFRAQ
Trigger: CTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTCACCAGCGCATTTGTaGATGGGGAAATGCCGAATC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITSPAHL*MGKCRI
Trigger: GATTCGGCATTTCCCCATCCACAAATGCGCTGGTGA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATTTAAGCTGATTGGATaGGTATGCTTGAGGCTAACC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRFKLIG*VCLRLT
Trigger: GGTTAGCCTCAAGCATACCCATCCAATCAGCTTAAA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCAATTACTGTTGTTTGTaGAACAGACTGTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPNYCCL*NRLLNN
Trigger: GTTGTTCAACAGTCTGTTCCACAAACAACAGTAATT...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTATAACTTCTGTGGCATaGACTTTTCTCGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLITSVA*TFLGIK
Trigger: TTTAATGCCGAGAAAAGTCCATGCCACAGAAGTTAT...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCAATATTCCTGAAGTTTaGAATTGGTGGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: NLGVLASLLCKAAHKTATNIPEV*NWWICK
Trigger: TTTGCAGATCCACCAATTCCAAACTTCAGGAATATT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACCTTTGTGATGTCTCTTaGCCCAGTCACTACCCACGG +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNLCDVS*PSHYPR
Trigger: CCGTGGGTAGTGACTGGGCCAAGAGACATCACAAAG...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAATATGTCCTGACCTTTaGAGACACTTCCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQICPDL*RHFPAY
Trigger: ATAAGCAGGGAAGTGTCTCCAAAGGTCAGGACATAT...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp ACTGCTGAACAATTTAAGCTGATTGGATGGGTATGCTaGAGGCTAACCAGTTCTGCAAAGGGAAACACACGG +
Preference number: 4 (lower is better)
Translates to: TAEQFKLIGWVC*RLTSSAKGNTR
Trigger: CCGTGTGTTTCCCTTTGCAGAACTGGTTAGCCTCAAGCATACCCATCCAATCAGCTTAAATTGTTCAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGGCTACATCCTCTGTTaGGAAAGGCCCGGAAATTTC +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESGYILC*ERPGNF
Trigger: GAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATCTTCACCTCTTAAATaGAATGATGGAATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSSPLK*NDGIPN
Trigger: GTTGGGGATTCCATCATTTCATTTAAGAGGTGAAGA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTTCTCAGGGCTGCCCTaGTTCCCAGAGGAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWFSGLP*FPEERQ
Trigger: CTGTCTCTCCTCTGGGAATCAGGGCAGCCCTGAGAA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTTTCTAGCCTTTTATTaGTACCACGAAAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGFLAFY*YHESDS
Trigger: GCTGTCACTTTCGTGGTATCAATAAAAGGCTAGAAA...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACCACGATGGCCTTGTCTaGGTTATACTCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNHDGLV*VILSAV
Trigger: GACTGCAGAGAGTATAACGCAGACAAGGCCATCGTG...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCATCTGTAAAGGGAACTaGTCACTTCTCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESICKGN*SLLRAA
Trigger: GGCAGCCCTGAGAAGTGAGCAGTTCCCTTTACAGAT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCTCCTTTATACAAACTTaGTTCAATTCCACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETSFIQT*FNSTQD
Trigger: GTCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGA...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTGCCACTGTCCACGATaGCCTTGTCTGCGTTATACT +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNCHCPR*PCLRYT
Trigger: AGTATAACGCAGACAAGGCCATCGTGGACAGTGGCA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTCTTGGCTGTTaGGATGATAATTCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILLGLGC*DDNSFG
Trigger: CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAA...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCAGCGCATTTGTGGATaGGGAAATGCCGAATCGGTA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESQRICG*GNAESV
Trigger: TACCGATTCGGCATTTCCCCATCCACAAATGCGCTG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCTCACCAGCGCATTTGTaGATGGGGAAATGCCGAATC +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESSPAHL*MGKCRI
Trigger: GATTCGGCATTTCCCCATCCACAAATGCGCTGGTGA...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTTAAGCTGATTGGATaGGTATGCTTGAGGCTAACC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILFKLIG*VCLRLT
Trigger: GGTTAGCCTCAAGCATACCCATCCAATCAGCTTAAA...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCATAACTGGAGGAGGTaGGTGTCACTAACAGGGTTT +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITHNWRR*VSLTGF
Trigger: AAACCCTGTTAGTGACACCCACCTCCTCCAGTTATG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTGACACCAATCACTTGTaGCTCTTTCAAATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTDTNHL*LFQIPK
Trigger: CTTGGGAATTTGAAAGAGCCACAAGTGATTGGTGTC...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAAACACGTAGCCTACTGTaGATACAAACGATACTTCTG +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLETRSLL*IQTILL
Trigger: CAGAAGTATCGTTTGTATTCACAGTAGGCTACGTGT...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTCTTCACCTCTTAAATaGAATGATGGAATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILSSPLK*NDGIPN
Trigger: GTTGGGGATTCCATCATTTCATTTAAGAGGTGAAGA...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAACCGCTTGAATATTCCTaGAGTTTGGAATTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLEPLEYS*SLELVD
Trigger: ATCCACCAATTCCAAACTTCAGGAATATTCAAGCGG...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCACATGACTCCCGCTTaGATATTCCTGAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITHMTPA*IFLKFG
Trigger: TCCAAACTTCAGGAATATTCAAGCGGGAGTCATGTG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGAACCCCATAGAGCCTaGAGCCCAATCCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSEPHRA*SPIHSV
Trigger: AACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCAACGGAACAGAAGATaGCTGTATGAAGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTQRNRR*LYEEIS
Trigger: GCTTATTTCTTCATACAGGCATCTTCTGTTCCGTTG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCTACAAATTTCCAGGTaGATGACCTTGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITLQISR*MTLNLP
Trigger: AGGCAGGTTCAAGGTCATGCACCTGGAAATTTGTAG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACTACAAATTTCCAGGTaGATGACCTTGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLQISR*MTLNLP
Trigger: AGGCAGGTTCAAGGTCATGCACCTGGAAATTTGTAG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAATCTCATTCATTCGCTaGCCTCTCATATGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKISFIR*PLICAE
Trigger: CTCAGCACATATGAGAGGGCAGCGAATGAATGAGAT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGAGTTTGCAGCTCTCCTaGCAGAAGCAAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITSLQLS*QKQNTD
Trigger: GTCAGTATTTTGCTTCTGGCAGGAGAGCTGCAAACT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCTCCACACATCTGCATaGAGAAAACGTTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESLHTSA*RKRWGC
Trigger: ACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATCCTTTATACAAACTTaGTTCAATTCCACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSFIQT*FNSTQD
Trigger: GTCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAACACAATCCACAAAATaGGCTCGCTCAAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKTQSTK*ARSKTE
Trigger: CTCAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAGTGTACAGTATATGCTaGGAGATCGGACACCAATCA +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKVYSIC*EIGHQS
Trigger: TGATTGGTGTCCGATCTCCCAGCATATACTGTACAC...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGTGTGTACTTCACTGTaGCGTCAAAGCCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWVCTSL*RQSPWS
Trigger: GCTCCAAGGGCTTTGACGTCACAGTGAAGTACACAC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATGTGGAACAGACTGTTaGACAACGATTTATTCCCAA +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLECGTDC*TTIYSQ
Trigger: TTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTCTCCATCCGTTGAATaGACCAATCCTTGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWSPSVE*TNPCSA
Trigger: CGCGGAGCAAGGATTGGTTCATTCAACGGATGGAGA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCTTTCCTGGAAGTCTCTaGCAGAAGACATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESFPGSL*QKTFWR
Trigger: TCTCCAGAATGTCTTCTGTCAGAGACTTCCAGGAAA...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGAAAAACATATGTCCTaGCCTTTGGAGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESEKHMS*PLETLP
Trigger: GGGAAGTGTCTCCAAAGGTCAGGACATATGTTTTTC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGACCATCGATCCCGGCTaGTGCCCTGGAAATGTGATT +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWTIDPG*CPGNVI
Trigger: AATCACATTTCCAGGGCAGCAGCCGGGATCGATGGT...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAAACCTAATGCTAAGTTaGACCTTTTCAGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKNLMLS*TFSGKD
Trigger: GTCCTTGCCTGAAAAGGTGCAACTTAGCATTAGGTT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTAGCGTGGCTATGTTCTaGCTTCCACATTCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSSVAMF*LPHSAD
Trigger: ATCTGCGGAATGTGGAAGGCAGAACATAGCCACGCT...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATCCAGATTAAGGCTTTaGCCTCCAATTTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLESRLRL*PPISNF
Trigger: GAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTGCCACTGTCCACGATaGCCTTGTCTGCGTTATACT +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSCHCPR*PCLRYT
Trigger: AGTATAACGCAGACAAGGCCATCGTGGACAGTGGCA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACACACAATCCACAAAATaGGCTCGCTCAAAGACTGAG +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNTQSTK*ARSKTE
Trigger: CTCAGTCTTTGAGCGAGCCCATTTTGTGGATTGTGT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCAGTTCAGCACCTGTTaGGTCTTGGCTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWQFSTC*VLAVGM
Trigger: CATCCCAACAGCCAAGACCCAACAGGTGCTGAACTG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTCACAGAAGGTTCTTCTaGCTGCTGGAGAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSHRRFF*LLESLP
Trigger: TGGAAGACTCTCCAGCAGCCAGAAGAACCTTCTGTG...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGTGTACAGTATATGCTaGGAGATCGGACACCAATCA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESVYSIC*EIGHQS
Trigger: TGATTGGTGTCCGATCTCCCAGCATATACTGTACAC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGCCAAGTGTTCAGAAGTaGAACCTGTTGTGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITPSVQK*NLLWKN
Trigger: GTTTTTCCACAACAGGTTCCACTTCTGAACACTTGG...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTATAACTTCTGTGGCATaGACTTTTCTCGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTITSVA*TFLGIK
Trigger: TTTAATGCCGAGAAAAGTCCATGCCACAGAAGTTAT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAGAAGTTTGGAATTGGTaGATCTGCAAAATAAATCAC +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQEVWNW*ICKINH
Trigger: GTGATTTATTTTGCAGATCCACCAATTCCAAACTTC...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAGAAGTTTGGAATTGGTaGATCTGCAAAATAAATCAC +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKREVWNW*ICKINH
Trigger: GTGATTTATTTTGCAGATCCACCAATTCCAAACTTC...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAACCTGAAGTTTGGAATTaGTGGATCTGCAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQPEVWN*WICKIN
Trigger: ATTTATTTTGCAGATCCACCAATTCCAAACTTCAGG...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTAGGGAGCTCCTTTCCTaGAAGTCTCTGACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSRELLS*KSLTED
Trigger: GTCTTCTGTCAGAGACTTCCAGGAAAGGAGCTCCCT...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAGTTTGGACTTTATCTaGTTGGTCTTACACAAACAA +
Preference number: 4 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSLDFI*LVLHKQ
Trigger: TTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp TGGCTATGTGTGAGGCACACGTGTGTTCTACACAGTTaGGACTTTATCTGGTTGGTCTTACACAAACAATTA +
Preference number: 4 (lower is better)
Translates to: WLCVRHTCVLHS*DFIWLVLHKQL
Trigger: TAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGTGCCTCACACATAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCACTACTTTCACAATTTTaGACAGTAACTGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSLLSQF*TVTDPK
Trigger: TTTGGGGTCAGTTACTGTTCAAAATTGTGAAAGTAG...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACACGATTTATTCCCAATaGTATCGAGTGGCACTAGTC +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNTIYSQ*YRVALV
Trigger: GACTAGTGCCACTCGATATCATTGGGAATAAATCGT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCCCGCTTGAATATTCCTaGAGTTTGGAATTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESPLEYS*SLELVD
Trigger: ATCCACCAATTCCAAACTTCAGGAATATTCAAGCGG...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGACCTCCTTGAAAGCTTaGCAAGCTAAGCATCAATTT +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITTSLKA*QAKHQF
Trigger: AAATTGATGCTTAGCTTGGCAAGCTTTCAAGGAGGT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAATCCTTTATACAAACTTaGTTCAATTCCACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: DTLKGLLIPFLFQANLLESFIQT*FNSTQD
Trigger: GTCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGA...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTCCTGAAGTTTGGAATTaGTGGATCTGCAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTPEVWN*WICKIN
Trigger: ATTTATTTTGCAGATCCACCAATTCCAAACTTCAGG...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTGTGGAACAGACTGTTaGACAACGATTTATTCCCAA +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNCGTDC*TTIYSQ
Trigger: TTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCACACTTCCCTGCTTATaGTATTCTTATCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESTLPCL*YSYLSV
Trigger: CACAGACAGATAAGAATATCATAAGCAGGGAAGTGT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGAAAAACATATGTCCTaGCCTTTGGAGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSEKHMS*PLETLP
Trigger: GGGAAGTGTCTCCAAAGGTCAGGACATATGTTTTTC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTGGAATTGGTGGATCTaGAAAATAAATCACATCTCC +
Preference number: 4 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITWNWWI*KINHIS
Trigger: GGAGATGTGATTTATTTTGCAGATCCACCAATTCCA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTCACTACCCACGGTGTaGTTTTTAAGCACACAAGTG +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSSLPTV*FLSTQV
Trigger: CACTTGTGTGCTTAAAAAGCACACCGTGGGTAGTGA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGAGACACCAGGATGGCTaGTCTCACAATAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWRHQDG*SHNSVQ
Trigger: TTGGACACTATTGTGAGAGCAGCCATCCTGGTGTCT...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp CACACGTGTGTTCTACACAGTTTGGACTTTATCTGGTaGGTCTTACACAAACAATTATCCATCTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: HTCVLHSLDFIW*VLHKQLSICKG
Trigger: CCCTTTACAGATGGATAATTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACTGTGTAGAACACACGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTGCATTCTGAGATTATaGGTTTTCAACAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNCILRL*VFNKLR
Trigger: TCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCAATGGTTTCAGTTACTaGAGGCAGGATTTATTTCAG +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESNGFSY*RQDLFQ
Trigger: CTGAAATAAATCCTGCCTTCAGTAACTGAAACCATT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTACTGGATTTATTGCTaGGAGTTACGTATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSYWIYC*ELRIPN
Trigger: GTTGGGGATACGTAACTCCCAGCAATAAATCCAGTA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp AGTGTATTACAAGGTAAAAATGACACCCTCAAAGGGTaGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVLQGKNDTLKG*LIPFLFQANLL
Trigger: AAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTCATTTTTACCTTGTAATACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTTGTGGATGGGGAAATaGCGAATCGGTAACATTCAT +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWLWMGK*RIGNIH
Trigger: ATGAATGTTACCGATTCGGCATTTCCCCATCCACAA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTTCACCTACTCTACCTaGAAACCTCACTTGTTACTT +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSFTYST*KPHLLL
Trigger: AAGTAACAAGTGAGGTTTCCAGGTAGAGTAGGTGAA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGACACCAATCACTTGTaGCTCTTTCAAATTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWDTNHL*LFQIPK
Trigger: CTTGGGAATTTGAAAGAGCCACAAGTGATTGGTGTC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACAATATTCCTGAAGTTTaGAATTGGTGGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNNIPEV*NWWICK
Trigger: TTTGCAGATCCACCAATTCCAAACTTCAGGAATATT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCAGTTTGGACTTTATCTaGTTGGTCTTACACAAACAA +
Preference number: 4 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESSLDFI*LVLHKQ
Trigger: TTGTTTGTGTAAGACCAACCAGATAAAGTCCAAACT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGATATGTCCTGACCTTTaGAGACACTTCCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWICPDL*RHFPAY
Trigger: ATAAGCAGGGAAGTGTCTCCAAAGGTCAGGACATAT...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGAAGTAGGGAGGATTTaGAAGCTTGAAAATCAAGAA +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSEVGRI*KLENQE
Trigger: TTCTTGATTTTCAAGCTTTCAAATCCTCCCTACTTC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR TCA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCAGAAGATGCCTGTATaGAGAAATAAGCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWQKMPV*RNKQEN
Trigger: GTTTTCCTGCTTATTTCTTCATACAGGCATCTTCTG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR GCA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTGGAATTGGTGGATCTaGAAAATAAATCACATCTCC +
Preference number: 4 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSWNWWI*KINHIS
Trigger: GGAGATGTGATTTATTTTGCAGATCCACCAATTCCA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp TGCAAGAGAAAACACATGGGGATTCCACTCCATTATTaGATTTCCACTAATCAGGATAAAGTCTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: CKRKHMGIPLHY*ISTNQDKVCEI
Trigger: AATTTCACAGACTTTATCCTGATTAGTGGAAATCAAATAATGGAGTGGAATCCCCATGTGTTTTCTCTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
3UTR CAA 72 bp ATCAGGATAAAGTCTGTGAAATTCAATTACTGTTGTTaGTGGAACAGACTGTTGAACAACGATTTATTCCCA +
Preference number: 4 (lower is better)
Translates to: IRIKSVKFNYCC*WNRLLNNDLFP
Trigger: TGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACAGTAATTGAATTTCACAGACTTTATCCTGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS CCA 90 bp CGCGGCCAGAGTCCCCCTGCAGGTTGTCTACCATGGCCAAGAAGTTaGCGGCGCCCGCGGGGGACGCCAGGGCAGGCTCCAGGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: RGQSPPAGCLPWPRS*RRPRGTPGQAPGRA
Trigger: CGCTCGCCCTGGAGCCTGCCCTGGCGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGCAGGGGGACTCTGGCCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS CCA 90 bp CCAGGTAGTAGCCGCGGCCAGAGTCCCCCTGCAGGTTGTCTACCATaGCCAAGAAGTTGGCGGCGCCCGCGGGGGACGCCAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PGSSRGQSPPAGCLP*PRSWRRPRGTPGQA
Trigger: AGCCTGCCCTGGCGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGCAGGGGGACTCTGGCCGCGGCTACTACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS TCA 90 bp GCTGCTCCTCAGCAGGTGACTGTAACTCAGCAACTCGGGGACCCGTaGGTGTCCCGAGGACTCACCAGAGATGCGCGGGCCACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: AAPQQVTVTQQLGDP*VSRGLTRDARATAS
Trigger: GGAAGCTGTGGCCCGCGCATCTCTGGTGAGTCCTCGGGACACTCACGGGTCCCCGAGTTGCTGAGTTACAGTCACCTGCTGAGGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491838.5
CDS GCA 90 bp TCAGCAACTCGGGGACCCGTGAGTGTCCCGAGGACTCACCAGAGATaGGCGGGCCACAGCTTCCACCACCGCATCAAACACCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SATRGPVSVPRTHQR*AGHSFHHRIKHLLG
Trigger: CCCCAGAAGGTGTTTGATGCGGTGGTGGAAGCTGTGGCCCGCGCATCTCTGGTGAGTCCTCGGGACACTCACGGGTCCCCGAGTTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491838.5
CDS-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGAGAGAGGACTCATCATaGACGACCTCAGGGTCACGG +
Preference number: 5 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLREDSS*TTSGSR
Trigger: CCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS TCA 90 bp AGGGGCTCGCTGCGAAGCCCACCCTCTTCTGGGCTCTGTCGAAGATaGCGTAGAAGCCCTCCATCACCGTGGCACCGATCACCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: RGSLRSPPSSGLCRR*RRSPPSPWHRSPAH
Trigger: ATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCTTCTACGTCATCTTCGACAGAGCCCAGAAGAGGGTGGGCTTCGCAGCGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS-3UTR CAA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGGTTGGGGATGTTTGCTaGTGTCACCAGGGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: AHGILGTFLADADLRAPLVGDVC*CHQGVE
Trigger: TTCGACTCCCTGGTGACACAAGCAAACATCCCCAAC...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGCACAATCTAGGGGTGTaGGCTTCACTCCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLHNLGV*ASLLCK
Trigger: TTTGCACAGGAGTGAAGCCAACACCCCTAGATTGTG...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTTGAGGATACACAGTTaGCAGCTCTCCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLLRIHS*QLSCQK
Trigger: CTTCTGGCAGGAGAGCTGCAAACTGTGTATCCTCAA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 90 bp CCACCACCGCATCAAACACCTTCTGGGGCAGGCGCAGCAGCGTGGTaGCACTGTCCACGATGGCCTTGTCTGCGTTATACTCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PPPHQTPSGAGAAAW*HCPRWPCLRYTLCS
Trigger: ACTGCAGAGAGTATAACGCAGACAAGGCCATCGTGGACAGTGGCACCACGCTGCTGCGCCTGCCCCAGAAGGTGTTTGATGCGGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS GCA 90 bp TGTGTCACCAGGGAGTCGAAGAAGGTCTCCAGAGAACTTGATGGCTaGGGGAGGGCGACAGAGAGGGGCACCCGCTTAGGACTCACAGTG +
Preference number: 5 (lower is better)
Translates to: CVTRESKKVSRELDG*GRATERGTRLGLTV
Trigger: CACTGTGAGTCCTAAGCGGGTGCCCCTCTCTGTCGCCCTCCCGCAGCCATCAAGTTCTCTGGAGACCTTCTTCGACTCCCTGGTGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463674.5
CDS-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGTCCAAGCAAACCTCCTaGAAAGCTTGCCAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLSKQTS*KACQAK
Trigger: CTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGGA...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCTCTCAAGGGTACAGCTaGGTTACATCCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGSQGYS*VTSPGP
Trigger: GGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAGA...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGCAACCTAATGCTAAGTaGCACCTTTTCAGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: AHGILGTFLADADLRAPLQPNAK*HLFRQG
Trigger: TCCTTGCCTGAAAAGGTGCAACTTAGCATTAGGTTG...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 90 bp CCGTTGGTCCCAGATCCAGCAACGGGCAAGCCGGCTCCACACATCTaGATGGAGAAAACGTTGGGGATGTTTGCTTGTGTCACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PLVPDPATGKPAPHI*MEKTLGMFACVTRE
Trigger: CTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCCCGTTGCTGGATCTGGGACCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS-3UTR CAA 90 bp GCGATGTCTGACCAGAGAGGACTCATCATTGACGACCTCAGGGTCACGGGGGCGAGGTCTCCAGAGAACTaGATGGCTTGGCAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: AMSDQRGLIIDDLRVTGARSPEN*MAWQVW
Trigger: CCACACTTGCCAAGCCATCAAGTTCTCTGGAGACCT...CGCCCCCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCTGGTCAGACATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CAA 90 bp GGGGCACCCAAGCATCAGGGACCAGGTACCCGCACGTCGCTCTTGCCGTGGCTGAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 5 (lower is better)
Translates to: GAPKHQGPGTRTSLLPWLRTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...CAGCCACGGCAAGAGCGACGTGCGGGTACCTGGTCCCTGATGCTTGGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS CCA 90 bp TGGTCCCAGATCCAGCAACGGGCAAGCCGGCTCCACACATCTGCATaGAGAAAACGTTGGGGATGTTTGCTTGTGTCACCAGGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: WSQIQQRASRLHTSA*RKRWGCLLVSPGSR
Trigger: TCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCCCGTTGCTGGATCTGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CCA 90 bp GAAGCCCTCCATCACCGTGGCACCGATCACCAGCGCATTTGTGGATaGGGAAATGCCGAATCGGTAACATTCATAATTCAGGCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: EALHHRGTDHQRICG*GNAESVTFIIQAGP
Trigger: GGGGCCGGCCTGAATTATGAATGTTACCGATTCGGCATTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS-3UTR CAA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGTTGAGTGCTAAGTACTaGGTTTTGGTTCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: AHGILGTFLADADLRAPLLSAKY*VLVQEK
Trigger: TTTCTCCTGAACCAAAACCAAGTACTTAGCACTCAA...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTCCCCTTTGGCCTCAGTaGCTTGACCCTCCCCTACAA +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPPLWPQ*LDPPLQ
Trigger: TTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGG...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCCCCTTTGGCCTCAGTaGCTTGACCCTCCCCTACAA +
Preference number: 5 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGPLWPQ*LDPPLQ
Trigger: TTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 90 bp CCATCACCGTGGCACCGATCACCAGCGCATTTGTGGATGGGGAAATaGCGAATCGGTAACATTCATAATTCAGGCCGGCCCCCATCATGG +
Preference number: 5 (lower is better)
Translates to: PSPWHRSPAHLWMGK*RIGNIHNSGRPPSW
Trigger: CCATGATGGGGGCCGGCCTGAATTATGAATGTTACCGATTCGGCATTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPVTSKP*ERYVLD
Trigger: GTCTAGCACATACCGCTCCAAGGGCTTTGACGTCAC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGACTCCTTTATACAAACTaGGTTCAATTCCACCCAAGA +
Preference number: 5 (lower is better)
Translates to: RRVGTGESATIDPGCCPGLLYTN*VQFHPR
Trigger: TCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGAG...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCGGCCTCCACGTCTCTTaGGCAGAGTCCTATATTTCT +
Preference number: 5 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGGLHVS*AESYIS
Trigger: AGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCC...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCCACAATCTAGGGGTGTaGGCTTCACTCCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGHNLGV*ASLLCK
Trigger: TTTGCACAGGAGTGAAGCCAACACCCCTAGATTGTG...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCCACGGCATCCTGGGGACGTTCTTGGCTGATGCGGACCTCCGTGCCCCACTGTTCAATTACTGTTGTTaGTGGAACAGACTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: AHGILGTFLADADLRAPLFNYCC*WNRLLN
Trigger: GTTCAACAGTCTGTTCCACAAACAACAGTAATTGAA...CAGTGGGGCACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGATGCCGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGACGGGTGGGCACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAGCAAAGCACTACTTTTaGCATCTGTTTGAGGATACA +
Preference number: 5 (lower is better)
Translates to: RRVGTGESATIDPGCCPGAKHYF*HLFEDT
Trigger: TGTATCCTCAAACAGATGCAAAAAGTAGTGCTTTGC...TCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTGCCCACCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS CCA 90 bp CGTAGAAGCCCTCCATCACCGTGGCACCGATCACCAGCGCATTTGTaGATGGGGAAATGCCGAATCGGTAACATTCATAATTCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RRSPPSPWHRSPAHL*MGKCRIGNIHNSGR
Trigger: CCGGCCTGAATTATGAATGTTACCGATTCGGCATTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCTTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS-3UTR CAA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCACAAGACTACCTCCGTaGGTCCCAGATCCAGCAACG +
Preference number: 5 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLITRLPP*VPDPAT
Trigger: CGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTGT...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCACAAGACTACCTCCGTaGGTCCCAGATCCAGCAACG +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATTRLPP*VPDPAT
Trigger: CGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTGT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCTTGAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACAGAGAGGACTCATCATaGACGACCTCAGGGTCACGG +
Preference number: 5 (lower is better)
Translates to: CLRSGLAIHFQRCLTREDREDSS*TTSGSR
Trigger: CCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCT...GTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CAA 90 bp GAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACTCATCCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: EVRPGYSFPAMSDQRGLIPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...GATGAGTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTCTCAAGGGTACAGCTaGGTTACATCCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIASQGYS*VTSPGP
Trigger: GGGGCCTGGGGATGTAACCAAGCTGTACCCTTGAGA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTACAGTTCAGCACCTGTaGGGTCTTGGCTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFTVQHL*GLGCWD
Trigger: ATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGT...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACCGATCACCAGCGCATTaGTGGATGGGGAAATGCCGA +
Preference number: 5 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNRSPAH*WMGKCR
Trigger: TCGGCATTTCCCCATCCACAAATGCGCTGGTGATCG...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GGGGCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAATTGGATGGGTATGCTaGAGGCTAACCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GACGSGSRSQGYSLVTSPIGWVC*RLTSSA
Trigger: TGCAGAACTGGTTAGCCTCAAGCATACCCATCCAAT...TGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCTGCAGTGGCGCAATCTaGGCTCACTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPCSGAI*AHYNLC
Trigger: GCAGAGGTTGTAGTGAGCCAAGATTGCGCCACTGCA...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGGCCCGTCCAGCTTCCTaGTGTGTACTTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGARPAS*CVLHCD
Trigger: GTCACAGTGAAGTACACACAAGGAAGCTGGACGGGC...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTGAAGTATTGAAGCCTTaGGGGATGGTGACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFEVLKP*GMVTRS
Trigger: AGACCTCGTCACCATCCCCAAAGGCTTCAATACTTC...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAAACGTTGGGGATGTTaGCTTGTGTCACCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISKRWGC*LVSPGS
Trigger: ACTCCCTGGTGACACAAGCAAACATCCCCAACGTTT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGT +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPGMIIL*GEGNSR
Trigger: ACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGGCCTCCACGTCTCTTaGGCAGAGTCCTATATTTCT +
Preference number: 5 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGGLHVS*AESYIS
Trigger: AGAAATATAGGACTCTGCCAAAGAGACGTGGAGGCC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCACCCGCACGTCGCTCTaGCCGTGGCTGGATTCAAAT +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETTRTSL*PWLDSN
Trigger: ATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS TCA 90 bp GCTCAAAGACTGAGCGGGGACACAGTTGCTGGCTACATCCTCTGTTaGGAAAGGCCCGGAAATTTCAGACACTGCAGCACCTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: AQRLSGDTVAGYILC*ERPGNFRHCSTCNF
Trigger: GAAATTGCAGGTGCTGCAGTGTCTGAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCAGCAACTGTGTCCCCGCTCAGTCTTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000466122.5
CDS CCA 90 bp TCCACAAAATGGGCTCGCTCAAAGACTGAGCGGGGACACAGTTGCTaGCTACATCCTCTGTTGAGAAAGGCCCGGAAATTTCAGACACTG +
Preference number: 5 (lower is better)
Translates to: STKWARSKTERGHSC*LHPLLRKARKFQTL
Trigger: CAGTGTCTGAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCAGCAACTGTGTCCCCGCTCAGTCTTTGAGCGAGCCCATTTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000466122.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGTTGGGGATGTTTGCTaGTGTCACCAGGGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLVGDVC*CHQGVE
Trigger: TTCGACTCCCTGGTGACACAAGCAAACATCCCCAAC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGGGATGATAATTCTTTaGGGTGAGGGGAACAGCCGT +
Preference number: 5 (lower is better)
Translates to: PQADSPAIILQAFLYHFDGMIIL*GEGNSR
Trigger: ACGGCTGTTCCCCTCACCCAAAAGAATTATCATCCC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACAGGAGAAAGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATT +
Preference number: 5 (lower is better)
Translates to: HRRKRHHRSRLLPWKCDFSTCWV*AVGMII
Trigger: AATTATCATCCCAACAGCCAAGACCCAACAGGTGCT...AAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCTTTCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATT +
Preference number: 5 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISSTCWV*AVGMII
Trigger: AATTATCATCCCAACAGCCAAGACCCAACAGGTGCT...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCTCGGACACCAATCACTaGTGGCTCTTTCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISSDTNH*WLFQIP
Trigger: GGGAATTTGAAAGAGCCACAAGTGATTGGTGTCCGA...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCCAGAAGTGGAACCTGTaGTGGAAAAACACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATQKWNL*WKNTPL
Trigger: GAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTG...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTATCCTGGGGACGTTCTaGGCTGATGCGGACCTCCGT +
Preference number: 5 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILILGTF*ADADLR
Trigger: ACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGAT...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 90 bp ACGTGTCTATGTAGGAGTGCGGGGTTCCTGCCACGGCAAAGTTACTaGTTCCAGTGTCAACGAGAATCTGTAGCTGGTGAGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: TCLCRSAGFLPRQSY*FQCQRESVAGEFWH
Trigger: ATGCCAAAACTCACCAGCTACAGATTCTCGTTGACACTGGAAGCAGTAACTTTGCCGTGGCAGGAACCCCGCACTCCTACATAGACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470864.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGAAGTATTGAAGCCTTaGGGGATGGTGACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLEVLKP*GMVTRS
Trigger: AGACCTCGTCACCATCCCCAAAGGCTTCAATACTTC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTGCATGGAGAAAACGTaGGGGATGTTTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATCMEKT*GMFACV
Trigger: GACACAAGCAAACATCCCCAACGTTTTCTCCATGCA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCCTGTCCACGATGGCCTaGTCTGCGTTATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETLSTMA*SALYSL
Trigger: CAGAGAGTATAACGCAGACAAGGCCATCGTGGACAG...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAACGATCACCAGCGCATTaGTGGATGGGGAAATGCCGA +
Preference number: 5 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQRSPAH*WMGKCR
Trigger: TCGGCATTTCCCCATCCACAAATGCGCTGGTGATCG...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGAAGGGAACACTGAACTaGGCACACAAGCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGKGTLN*AHKQER
Trigger: TCTCTCCTGCTTGTGTGCCAAGTTCAGTGTTCCCTT...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCGTCACTAACAGGGTTTaGACTGGAAGTCCGATTCTC +
Preference number: 5 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPVTNRV*TGSPIL
Trigger: GAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGAC...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTAAGCTAAGCATCAATTaGCATAACTGGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPKLSIN*HNWRRW
Trigger: CCACCTCCTCCAGTTATGCAAATTGATGCTTAGCTT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTGACACCCTCAAAGGGTaGTTAATTCCTTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGDTLKG*LIPFLF
Trigger: GAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTACACATGACTCCCGCTaGAATATTCCTGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPTHDSR*NIPEVW
Trigger: CCAAACTTCAGGAATATTCAAGCGGGAGTCATGTGT...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAATCCTGGGGACGTTCTaGGCTGATGCGGACCTCCGT +
Preference number: 5 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSILGTF*ADADLR
Trigger: ACGGAGGTCCGCATCAGCCAAGAACGTCCCCAGGAT...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ACGTCTCTTTGGCAGAGTCCTATATTTCTCAGTATGGTGGTGACCCGGGGACCCTTTGGCCTCAGTTGCTaGACCCTCCCCTACAAATTT +
Preference number: 5 (lower is better)
Translates to: TSLWQSPIFLSMVVTRGPFGLSC*TLPYKF
Trigger: AAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAA...GGGTCCCCGGGTCACCACCATACTGAGAAATATAGGACTCTGCCAAAGAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTACCCGCACGTCGCTCTaGCCGTGGCTGGATTCAAAT +
Preference number: 5 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTTRTSL*PWLDSN
Trigger: ATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGT...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTVTSKP*ERYVLD
Trigger: GTCTAGCACATACCGCTCCAAGGGCTTTGACGTCAC...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAAGGTCTCCAGAGAACTaGATGGCTTGGCAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQRSPEN*MAWQVW
Trigger: CCACACTTGCCAAGCCATCAAGTTCTCTGGAGACCT...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGGTTGGGGATGTTTGCTaGTGTCACCAGGGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGVGDVC*CHQGVE
Trigger: TTCGACTCCCTGGTGACACAAGCAAACATCCCCAAC...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GGACCATCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGATGCATGGAGAAAACGTaGGGGATGTTTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: GPSVDDLLVNSGSHSEHRCMEKT*GMFACV
Trigger: GACACAAGCAAACATCCCCAACGTTTTCTCCATGCA...TCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTGGTTACATCCCCAGGCCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTGTCCAGATTAAGGCTTaGGCCTCCAATTTCCAATTT +
Preference number: 5 (lower is better)
Translates to: LVTSPGPRLILLPSYCKPVQIKA*ASNFQF
Trigger: AAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGAC...AGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGGCCTGGGGATGTAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGCTGTCCACGATGGCCTaGTCTGCGTTATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGLSTMA*SALYSL
Trigger: CAGAGAGTATAACGCAGACAAGGCCATCGTGGACAG...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCTTGAGGTCAGGCCTGGCTATTCATTTCCAGCGATGTCTGACCAGAGAGGACAGCCAAGGCTTGGTTTaGTTTTATGTTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: CLRSGLAIHFQRCLTREDSQGLV*FYVGGT
Trigger: TGTGCCACCAACATAAAACAAAACCAAGCCTTGGCT...GTCCTCTCTGGTCAGACATCGCTGGAAATGAATAGCCAGGCCTGACCTCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAACAGTTCAGCACCTGTaGGGTCTTGGCTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRTVQHL*GLGCWD
Trigger: ATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GCCTGTGGCTCTGGTTCCAGGTCTCAAGGGTACAGCTTGGTTACATCCCCAGGCATGTCCCACATTCAATaGTCTATCTCATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ACGSGSRSQGYSLVTSPGMSHIQ*SISFLL
Trigger: CAACAAGAATGAGATAGACAATTGAATGTGGGACAT...GCCTGGGGATGTAACCAAGCTGTACCCTTGAGACCTGGAACCAGAGCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGTCACTAACAGGGTTTaGACTGGAAGTCCGATTCTC +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLVTNRV*TGSPIL
Trigger: GAGAATCGGACTTCCAGTCAAAACCCTGTTAGTGAC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCTGCTGCAGGAGGAAGCTCCCCGCCTCTGAAACCTAACACAATACAACGGAACAAGCTAAGCATCAATTaGCATAACTGGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SAAGGSSPPLKPNTIQRNKLSIN*HNWRRW
Trigger: CCACCTCCTCCAGTTATGCAAATTGATGCTTAGCTT...GTTCCGTTGTATTGTGTTAGGTTTCAGAGGCGGGGAGCTTCCTCCTGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTCCAAGCAAACCTCCTaGAAAGCTTGCCAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIASKQTS*KACQAK
Trigger: CTTAGCTTGGCAAGCTTTCAAGGAGGTTTGCTTGGA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCAGCCACAGTCTCTCTTaGTCAAAGCTGTCACTTACA +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATSHSLS*SKLSLT
Trigger: TGTAAGTGACAGCTTTGACAAAGAGAGACTGTGGCT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCATGTCAAAGGCTAGGTaGCCAAGGACACCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETMSKAR*PRTPKV
Trigger: AACCTTGGGTGTCCTTGGCAACCTAGCCTTTGACAT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGCCCGCGCCGCCAAGTaGGGCAAGTTCTTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSARAAK*GKFFSA
Trigger: AGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGGC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCTGCATGGAGAAAACGTaGGGGATGTTTGCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETCMEKT*GMFACV
Trigger: GACACAAGCAAACATCCCCAACGTTTTCTCCATGCA...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCGTCCAGATTAAGGCTTaGGCCTCCAATTTCCAATTT +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATVQIKA*ASNFQF
Trigger: AAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGAC...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATRTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGACAGTTCAGCACCTGTaGGGTCTTGGCTGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMTVQHL*GLGCWD
Trigger: ATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTGACACCCTCAAAGGGTaGTTAATTCCTTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIADTLKG*LIPFLF
Trigger: GAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTTGTACTCTCCATCCGTaGAATGAACCAATCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLCTLHP*NEPILA
Trigger: AGCAAGGATTGGTTCATTCAACGGATGGAGAGTACA...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AATCTAGGGGTGTTGGCTTCACTCCTGTGCAAAGCGGCCCACAAAACAGCAACCTGTGTTCTACACAGTTaGGACTTTATCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLGVLASLLCKAAHKTATCVLHS*DFIWLV
Trigger: GACCAACCAGATAAAGTCCAAACTGTGTAGAACACA...GGTTGCTGTTTTGTGGGCCGCTTTGCACAGGAGTGAAGCCAACACCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAAATGTCAAAGGCTAGGTaGCCAAGGACACCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQMSKAR*PRTPKV
Trigger: AACCTTGGGTGTCCTTGGCAACCTAGCCTTTGACAT...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGCCCGCGCCGCCAAGTaGGGCAAGTTCTTCTCCGCT +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWARAAK*GKFFSA
Trigger: AGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGGC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAACAAGACTACCTCCGTaGGTCCCAGATCCAGCAACG +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKTRLPP*VPDPAT
Trigger: CGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTGT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCACTGTCCACGATGGCCTaGTCTGCGTTATACTCTCTG +
Preference number: 5 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSLSTMA*SALYSL
Trigger: CAGAGAGTATAACGCAGACAAGGCCATCGTGGACAG...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAAGAGAGGACTCATCATaGACGACCTCAGGGTCACGG +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKREDSS*TTSGSR
Trigger: CCGTGACCCTGAGGTCGTCAATGATGAGTCCTCTCT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTAGAACGAGCCAAGGCTaGGTTTTGTTTTATGTTGGT +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIARTSQG*VLFYVG
Trigger: ACCAACATAAAACAAAACCAAGCCTTGGCTCGTTCT...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATGTCTTCTGCACATCTaGCATCTTCCTTCCCTGACA +
Preference number: 5 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRCLLHI*HLPSLT
Trigger: TGTCAGGGAAGGAAGATGCAAGATGTGCAGAAGACA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTTGTGTTCTACACAGTTaGGACTTTATCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIACVLHS*DFIWLV
Trigger: GACCAACCAGATAAAGTCCAAACTGTGTAGAACACA...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CCCCAGGCTGATTCTCCTGCCATCATACTGCAAGCCTTCCTGTACCACTTTGACGCAAAGCACTACTTTTaGCATCTGTTTGAGGATACA +
Preference number: 5 (lower is better)
Translates to: PQADSPAIILQAFLYHFDAKHYF*HLFEDT
Trigger: TGTATCCTCAAACAGATGCAAAAAGTAGTGCTTTGC...GTCAAAGTGGTACAGGAAGGCTTGCAGTATGATGGCAGGAGAATCAGCCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCAGGTCAGAAAACAAACGTTTaGCAAAGCACTACTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LPAPFGLSCLTLPYKFPGQKTNV*QSTTFC
Trigger: GCAAAAAGTAGTGCTTTGCAAAACGTTTGTTTTCTG...ACCTGGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CACTTTACCGGCCCCCTTTGGCCTCAGTTGCTTGACCCTCCCCTACAAATTTCCCAGAAAACAAACGTTTaGCAAAGCACTACTTTTTGC +
Preference number: 5 (lower is better)
Translates to: HFTGPLWPQLLDPPLQISQKTNV*QSTTFC
Trigger: GCAAAAAGTAGTGCTTTGCAAAACGTTTGTTTTCTG...GGAAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAAGGGGGCCGGTAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCGCCCGTCCAGCTTCCTaGTGTGTACTTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESARPAS*CVLHCD
Trigger: GTCACAGTGAAGTACACACAAGGAAGCTGGACGGGC...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCTCCTGCCAGAAGCAAAATACTGACTCTAGCACAGCAGAAAAGGCATCAACTTGGCTACATCCTCTGTaGAGAAAGGCCCGGAAATTT +
Preference number: 5 (lower is better)
Translates to: LSCQKQNTDSSTAEKASTWLHPL*RKARKF
Trigger: AAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCA...AGTTGATGCCTTTTCTGCTGTGCTAGAGTCAGTATTTTGCTTCTGGCAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGATTGGATGGGTATGCTaGAGGCTAACCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMIGWVC*RLTSSA
Trigger: TGCAGAACTGGTTAGCCTCAAGCATACCCATCCAAT...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCAGAAATAGGGGCATCAGGCCATTTCCCTGTTTCCCAACAGGGTAATAGCCAACAACCTAATGCTAAGTaGCACCTTTTCAGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SEIGASGHFPVSQQGNSQQPNAK*HLFRQG
Trigger: TCCTTGCCTGAAAAGGTGCAACTTAGCATTAGGTTG...TTGGCTATTACCCTGTTGGGAAACAGGGAAATGGCCTGATGCCCCTATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTCATTTCCCATCAGACTaGACAAGGTTTCTGATAACA +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIAHFPSD*TRFLIT
Trigger: TGTTATCAGAAACCTTGTCAAGTCTGATGGGAAATG...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTCGGACACCAATCACTaGTGGCTCTTTCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMSDTNH*WLFQIP
Trigger: GGGAATTTGAAAGAGCCACAAGTGATTGGTGTCCGA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAAGCCACAGTCTCTCTTaGTCAAAGCTGTCACTTACA +
Preference number: 5 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSHSLS*SKLSLT
Trigger: TGTAAGTGACAGCTTTGACAAAGAGAGACTGTGGCT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTGTACTCTCCATCCGTaGAATGAACCAATCCTTGCT +
Preference number: 5 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGCTLHP*NEPILA
Trigger: AGCAAGGATTGGTTCATTCAACGGATGGAGAGTACA...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GACAGTGAATCTAGAAGGCATCTGGGAGCAGAACAGAGATTGAAGACGGGTGGGACTTTTTGCATCTGTTaGAGGATACACAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: DSESRRHLGAEQRLKTGGTFCIC*RIHSLQ
Trigger: CTGCAAACTGTGTATCCTCAAACAGATGCAAAAAGT...CCCACCCGTCTTCAATCTCTGTTCTGCTCCCAGATGCCTTCTAGATTCACTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 90 bp AAACCAAGATGCAGAAACTTCTATTCACCTCAAAAGGTTCCTTTATaGCCCTTTCCCTTCTGGTCCCCAGAAGCAACCACTTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: KPRCRNFYSPQKVPL*PFPFWSPEATTFWL
Trigger: AAGCCAGAAAGTGGTTGCTTCTGGGGACCAGAAGGGAAAGGGGCATAAAGGAACCTTTTGAGGTGAATAGAAGTTTCTGCATCTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470864.5
CDS-3UTR CAA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGGAAGTATTGAAGCCTTaGGGGATGGTGACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITEVLKP*GMVTRS
Trigger: AGACCTCGTCACCATCCCCAAAGGCTTCAATACTTC...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAAAACGTTGGGGATGTTaGCTTGTGTCACCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKKRWGC*LVSPGS
Trigger: ACTCCCTGGTGACACAAGCAAACATCCCCAACGTTT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGAAGGGAACACTGAACTaGGCACACAAGCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITKGTLN*AHKQER
Trigger: TCTCTCCTGCTTGTGTGCCAAGTTCAGTGTTCCCTT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGGACACTTAGCACTTTaGGTGGAATTCTGTAATATA +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLGHLAL*VEFCNI
Trigger: TATATTACAGAATTCCACCAAAAGTGCTAAGTGTCC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGCGCCACCATCGATCCCGGCTGCTGCCCTGGAAATGTGATTTTCTTAATAGCTACCTGGAAACCTCACTaGTTACTTTCCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: SATIDPGCCPGNVIFLIATWKPH*LLSCIL
Trigger: TAAAATACAGGAAAGTAACAAGTGAGGTTTCCAGGT...AGCTATTAAGAAAATCACATTTCCAGGGCAGCAGCCGGGATCGATGGTGGCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp AGGTACCCGCACGTCGCTCTTGCCGTGGCTGGATTCAAATTTATCAGGAAGCTTGCTAAGTACTTGGTTTaGGTTCAGGAGAAATACAAA +
Preference number: 5 (lower is better)
Translates to: RYPHVALAVAGFKFIRKLAKYLV*VQEKYK
Trigger: TTTGTATTTCTCCTGAACCAAAACCAAGTACTTAGC...AAGCTTCCTGATAAATTTGAATCCAGCCACGGCAAGAGCGACGTGCGGGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GTTGATGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTACACATGACTCCCGCTaGAATATTCCTGAAGTTTGG +
Preference number: 5 (lower is better)
Translates to: VDAQFSTCWVLAVGMIILTHDSR*NIPEVW
Trigger: CCAAACTTCAGGAATATTCAAGCGGGAGTCATGTGT...AAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS CCA 90 bp AGTTACTGCTTCCAGTGTCAACGAGAATCTGTAGCTGGTGAGTTTTaGCATGTGTGCCAAACCAAGATGCAGAAACTTCTATTCACCTCA +
Preference number: 5 (lower is better)
Translates to: SYCFQCQRESVAGEF*HVCQTKMQKLLFTS
Trigger: TGAGGTGAATAGAAGTTTCTGCATCTTGGTTTGGCACACATGCCAAAACTCACCAGCTACAGATTCTCGTTGACACTGGAAGCAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470864.5
CDS-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTGCCCGTCCAGCTTCCTaGTGTGTACTTCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSARPAS*CVLHCD
Trigger: GTCACAGTGAAGTACACACAAGGAAGCTGGACGGGC...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACAAACGTTGGGGATGTTaGCTTGTGTCACCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNKRWGC*LVSPGS
Trigger: ACTCCCTGGTGACACAAGCAAACATCCCCAACGTTT...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAAAGCACCTGTTGGGTCTaGGCTGTTGGGATGATAATT +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKSTCWV*AVGMII
Trigger: AATTATCATCCCAACAGCCAAGACCCAACAGGTGCT...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGATCTTATTTCAGGGCTTaGAATTTTTCACAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRSYFRA*NFSQQG
Trigger: CCCTTGCTGTGAAAAATTCAAAGCCCTGAAATAAGA...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCACCTGGAAACCTCACTaGTTACTTTCCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETTWKPH*LLSCIL
Trigger: TAAAATACAGGAAAGTAACAAGTGAGGTTTCCAGGT...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TCGGTTGATGACCTCCTAGTGAATTCTGGCTCCCATTCAGAGCACAGAGAAACCGCTAAGTACTTGGTTTaGGTTCAGGAGAAATACAAA +
Preference number: 5 (lower is better)
Translates to: SVDDLLVNSGSHSEHRETAKYLV*VQEKYK
Trigger: TTTGTATTTCTCCTGAACCAAAACCAAGTACTTAGC...GGTTTCTCTGTGCTCTGAATGGGAGCCAGAATTCACTAGGAGGTCATCAACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGCACAGTTCAGCACCTGTTGGGTCTTGGCTGTTGGGATGATAATTCTTTTGGGTTGAGTGCTAAGTACTaGGTTTTGGTTCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CTVQHLLGLGCWDDNSFGLSAKY*VLVQEK
Trigger: TTTCTCCTGAACCAAAACCAAGTACTTAGCACTCAA...CCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGCTGAACTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACCAGAAGTGGAACCTGTaGTGGAAAAACACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNQKWNL*WKNTPL
Trigger: GAGGGGAGTGTTTTTCCACAACAGGTTCCACTTCTG...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAATTTGGCCTCAGTTGCTaGACCCTCCCCTACAAATTT +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKFGLSC*TLPYKF
Trigger: AAATTTGTAGGGGAGGGTCAAGCAACTGAGGCCAAA...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GAGCAGAGCAGATGGCTGAAACATCCACACGTAGCCTACTGTGAATACAAACGAACTTTTTGCATCTGTTaGAGGATACACAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: EQSRWLKHPHVAYCEYKRTFCIC*RIHSLQ
Trigger: CTGCAAACTGTGTATCCTCAAACAGATGCAAAAAGT...TCGTTTGTATTCACAGTAGGCTACGTGTGGATGTTTCAGCCATCTGCTCTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWVTSKP*ERYVLD
Trigger: GTCTAGCACATACCGCTCCAAGGGCTTTGACGTCAC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCAGTCCAGATTAAGGCTTaGGCCTCCAATTTCCAATTT +
Preference number: 5 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSVQIKA*ASNFQF
Trigger: AAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGAC...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGCCTTCCTGTACCACTTaGACCCAGGTTGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWPSCTT*TQVEVW
Trigger: CCAGACCTCAACCTGGGTCAAAGTGGTACAGGAAGG...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TACAACATAAGTATTGGGTACAAAAGAGGAGATTTCCTTCCCCTCTACCTCAACTGTCTTCTGCACATCTaGCATCTTCCTTCCCTGACA +
Preference number: 5 (lower is better)
Translates to: YNISIGYKRGDFLPLYLNCLLHI*HLPSLT
Trigger: TGTCAGGGAAGGAAGATGCAAGATGTGCAGAAGACA...GTTGAGGTAGAGGGGAAGGAAATCTCCTCTTTTGTACCCAATACTTATGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATAACGAACCCCATAGAGCCTGCAGCCCAATCCACTCTGTTTTGGTTTAGAATGTCTTATTTCAGGGCTTaGAATTTTTCACAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: ITNPIEPAAQSTLFWFRMSYFRA*NFSQQG
Trigger: CCCTTGCTGTGAAAAATTCAAAGCCCTGAAATAAGA...CATTCTAAACCAAAACAGAGTGGATTGGGCTGCAGGCTCTATGGGGTTCGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp GACACCCTCAAAGGGTTGTTAATTCCTTTCCTGTTCCAAGCAAACCTCCTTGAAAATCTAGTACCTCTCTaGGCCAGAACCCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: DTLKGLLIPFLFQANLLENLVPL*ARTPNF
Trigger: AAAATTAGGGGTTCTGGCCAAGAGAGGTACTAGATT...TTCAAGGAGGTTTGCTTGGAACAGGAAAGGAATTAACAACCCTTTGAGGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp ATCTCTCCGTGTGAAATGCATTCTGAGATTATGAGTTTTCAACAAGCTGAGAGCAGCCAAGGCTTGGTTTaGTTTTATGTTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: ISPCEMHSEIMSFQQAESSQGLV*FYVGGT
Trigger: TGTGCCACCAACATAAAACAAAACCAAGCCTTGGCT...GCTCTCAGCTTGTTGAAAACTCATAATCTCAGAATGCATTTCACACGGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTCGCTGCCCTCTCATATGTGCTGAGTAACTGCTACACAGAATTTCAAACCTCATTGTGGAACAGACTGTaGAACAACGATTTATTCCCA +
Preference number: 5 (lower is better)
Translates to: FAALSYVLSNCYTEFQTSLWNRL*NNDLFP
Trigger: TGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAA...TGAGGTTTGAAATTCTGTGTAGCAGTTACTCAGCACATATGAGAGGGCAGCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TTTACACATGGCTGTCAAGCAAGTTTCTCTTGGCCTAATTGTTCCTCTGGCAAACTCCTTTATACAAACTaGGTTCAATTCCACCCAAGA +
Preference number: 5 (lower is better)
Translates to: FTHGCQASFSWPNCSSGKLLYTN*VQFHPR
Trigger: TCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGAG...TTTGCCAGAGGAACAATTAGGCCAAGAGAAACTTGCTTGACAGCCATGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp TGTTGTTTGTGGAACAGACTGTTGAACAACGATTTATTCCCAATGATATCGAGTTGGCTACATCCTCTGTaGAGAAAGGCCCGGAAATTT +
Preference number: 5 (lower is better)
Translates to: CCLWNRLLNNDLFPMISSWLHPL*RKARKF
Trigger: AAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCA...ACTCGATATCATTGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAAACAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTTGAGGATACACAGTTaGCAGCTCTCCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWLRIHS*QLSCQK
Trigger: CTTCTGGCAGGAGAGCTGCAAACTGTGTATCCTCAA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTGGCTACATCCTCTGTaGAGAAAGGCCCGGAAATTT +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWWLHPL*RKARKF
Trigger: AAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGGCTTCCACTTTTCTTaGGCAAAGGCCTCGATAAGT +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWGFHFS*AKASIS
Trigger: ACTTATCGAGGCCTTTGCCAAAGAAAAGTGGAAGCC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGATGTCCCACATTCAATaGTCTATCTCATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITMSHIQ*SISFLL
Trigger: CAACAAGAATGAGATAGACAATTGAATGTGGGACAT...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CAAGGCTTGGTTTTGTTTTATGTTGGTGGCACATGTAGACACTTTGGCATAACGTTCAATTACTGTTGTTaGTGGAACAGACTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QGLVLFYVGGTCRHFGITFNYCC*WNRLLN
Trigger: GTTCAACAGTCTGTTCCACAAACAACAGTAATTGAA...CGTTATGCCAAAGTGTCTACATGTGCCACCAACATAAAACAAAACCAAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGTTGTGGAACAGACTGTaGAACAACGATTTATTCCCA +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWLWNRL*NNDLFP
Trigger: TGGGAATAAATCGTTGTTCAACAGTCTGTTCCACAA...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS-3UTR CAA 90 bp CTCAAAAGAGGTAGTGTTTTTACTTTCGCACCAACAATACAACATAAGTATTGGGGACACTTAGCACTTTaGGTGGAATTCTGTAATATA +
Preference number: 5 (lower is better)
Translates to: LKRGSVFTFAPTIQHKYWGHLAL*VEFCNI
Trigger: TATATTACAGAATTCCACCAAAAGTGCTAAGTGTCC...CCAATACTTATGTTGTATTGTTGGTGCGAAAGTAAAAACACTACCTCTTTTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330333.11
ENST00000347667.5
CDS GCA 72 bp AGCCCGCGCCGCCAAGTTGGGCAAGTTCTTCTCCGCTaGCCCCTCTGGCGGCCGCGACTGCCCCGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: SPRRQVGQVLLR*PLWRPRLPRSG
Trigger: GCCGCTGCGGGGCAGTCGCGGCCGCCAGAGGGGGCAGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000347667.5
CDS CCA 72 bp GGAGGCGCAGAGCCGCCCCAGCCCGCGCCGCCAAGTTaGGCAAGTTCTTCTCCGCTGCCCCCTCTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: GGAEPPQPAPPS*ASSSPLPPLAA
Trigger: GGCCGCCAGAGGGGGCAGCGGAGAAGAACTTGCCCAACTTGGCGGCGCGGGCTGGGGCGGCTCTGCGCCTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328735.10
ENST00000347667.5
CDS CCA 72 bp AGTCCCCCTGCAGGTTGTCTACCATGGCCAAGAAGTTaGCGGCGCCCGCGGGGGACGCCAGGGCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: SPPAGCLPWPRS*RRPRGTPGQAP
Trigger: TGGAGCCTGCCCTGGCGTCCCCCGCGGGCGCCGCCAACTTCTTGGCCATGGTAGACAACCTGCAGGGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
CDS GCA 72 bp CGGGGACCCGTGAGTGTCCCGAGGACTCACCAGAGATaGGCGGGCCACAGCTTCCACCACCGCATCAAACAC +
Preference number: 6 (lower is better)
Translates to: RGPVSVPRTHQR*AGHSFHHRIKH
Trigger: GTGTTTGATGCGGTGGTGGAAGCTGTGGCCCGCGCATCTCTGGTGAGTCCTCGGGACACTCACGGGTCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491838.5
CDS TCA 72 bp CAGCAGGTGACTGTAACTCAGCAACTCGGGGACCCGTaGGTGTCCCGAGGACTCACCAGAGATGCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: QQVTVTQQLGDP*VSRGLTRDARA
Trigger: GGCCCGCGCATCTCTGGTGAGTCCTCGGGACACTCACGGGTCCCCGAGTTGCTGAGTTACAGTCACCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491838.5
CDS TCA 72 bp CTGCGAAGCCCACCCTCTTCTGGGCTCTGTCGAAGATaGCGTAGAAGCCCTCCATCACCGTGGCACCGATCA +
Preference number: 6 (lower is better)
Translates to: LRSPPSSGLCRR*RRSPPSPWHRS
Trigger: TGATCGGTGCCACGGTGATGGAGGGCTTCTACGTCATCTTCGACAGAGCCCAGAAGAGGGTGGGCTTCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS GCA 72 bp CACTGCAGCACCTGCAATTTCTGCACAGGGGCTCGCTaGGAAGCCCACCCTCTTCTGGGCTCTGTCGAAGAT +
Preference number: 6 (lower is better)
Translates to: HCSTCNFCTGAR*EAHPLLGSVED
Trigger: ATCTTCGACAGAGCCCAGAAGAGGGTGGGCTTCGCAGCGAGCCCCTGTGCAGAAATTGCAGGTGCTGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000466122.5
CDS GCA 72 bp CATCAAACACCTTCTGGGGCAGGCGCAGCAGCGTGGTaGCACTGTCCACGATGGCCTTGTCTGCGTTATACT +
Preference number: 6 (lower is better)
Translates to: HQTPSGAGAAAW*HCPRWPCLRYT
Trigger: AGTATAACGCAGACAAGGCCATCGTGGACAGTGGCACCACGCTGCTGCGCCTGCCCCAGAAGGTGTTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 90 bp GGGGATGGTGACGAGGTCTTCCCCAACGAAGCCCGTCCAGCTTCCTaGTGTGTACTTCACTGTGACGTCAAAGCCCTTGGAGCGGTATGT +
Preference number: 6 (lower is better)
Translates to: GDGDEVFPNEARPAS*CVLHCDVKALGAVC
Trigger: ACATACCGCTCCAAGGGCTTTGACGTCACAGTGAAGTACACACAAGGAAGCTGGACGGGCTTCGTTGGGGAAGACCTCGTCACCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000465326.5
ENST00000466122.5
ENST00000470864.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 90 bp CCAGCAACGGGCAAGCCGGCTCCACACATCTGCATGGAGAAAACGTaGGGGATGTTTGCTTGTGTCACCAGGGAGTCGAAGAAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PATGKPAPHICMEKT*GMFACVTRESKKVS
Trigger: GGAGACCTTCTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCCCGTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CCA 72 bp TTGGTTCAATTCCACCCAAGACAAGACTACCTCCGTTaGTCCCAGATCCAGCAACGGGCAAGCCGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LVQFHPRQDYLR*SQIQQRASRLH
Trigger: GTGGAGCCGGCTTGCCCGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTGTCTTGGGTGGAATTGAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000491838.5
CDS CAA 72 bp CTTGGTTCAATTCCACCCAAGACAAGACTACCTCCGTaGGTCCCAGATCCAGCAACGGGCAAGCCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LGSIPPKTRLPP*VPDPATGKPAP
Trigger: TGGAGCCGGCTTGCCCGTTGCTGGATCTGGGACCAACGGAGGTAGTCTTGTCTTGGGTGGAATTGAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000491838.5
CDS TCA 72 bp CTGAGCGGGGACACAGTTGCTGGCTACATCCTCTGTTaGGAAAGGCCCGGAAATTTCAGACACTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: LSGDTVAGYILC*ERPGNFRHCST
Trigger: GGTGCTGCAGTGTCTGAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCAGCAACTGTGTCCCCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000466122.5
CDS GCA 72 bp CCAGATCCAGCAACGGGCAAGCCGGCTCCACACATCTaGATGGAGAAAACGTTGGGGATGTTTGCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: PDPATGKPAPHI*MEKTLGMFACV
Trigger: GACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCCCGTTGCTGGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp GACGAGGTCTTCCCCAACGAAGCCCGTCCAGCTTCCTaGTGTGTACTTCACTGTGACGTCAAAGCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: DEVFPNEARPAS*CVLHCDVKALG
Trigger: TCCAAGGGCTTTGACGTCACAGTGAAGTACACACAAGGAAGCTGGACGGGCTTCGTTGGGGAAGACCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000465326.5
ENST00000466122.5
ENST00000470864.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp GGCAAGCCGGCTCCACACATCTGCATGGAGAAAACGTaGGGGATGTTTGCTTGTGTCACCAGGGAGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GKPAPHICMEKT*GMFACVTRESK
Trigger: CTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CCA 72 bp ATCCAGCAACGGGCAAGCCGGCTCCACACATCTGCATaGAGAAAACGTTGGGGATGTTTGCTTGTGTCACCA +
Preference number: 6 (lower is better)
Translates to: IQQRASRLHTSA*RKRWGCLLVSP
Trigger: TGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGCCCGTTGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CCA 72 bp GACCAAGGTGTTTCCGAATTCGTCCAGCACGCCAGCTaGGACCCAGTCCAGAAACCATCAGAGAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: DQGVSEFVQHAS*DPVQKPSENSG
Trigger: TCCAGAATTCTCTGATGGTTTCTGGACTGGGTCCCAGCTGGCGTGCTGGACGAATTCGGAAACACCTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
CDS CCA 72 bp ATCGGTAACATTCATAATTCAGGCCGGCCCCCATCATaGGCTGAATGTAAAGCAGAGATGCGCGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: IGNIHNSGRPPS*AECKAEMRGPQ
Trigger: CTGTGGCCCGCGCATCTCTGCTTTACATTCAGCCCATGATGGGGGCCGGCCTGAATTATGAATGTTACCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347667.5
CDS CAA 72 bp AGCCCTCCATCACCGTGGCACCGATCACCAGCGCATTaGTGGATGGGGAAATGCCGAATCGGTAACATTCAT +
Preference number: 6 (lower is better)
Translates to: SPPSPWHRSPAH*WMGKCRIGNIH
Trigger: ATGAATGTTACCGATTCGGCATTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000475618.1
ENST00000487994.5
CDS CAA 72 bp CTTCCTTGTGTGTACTTCACTGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGACCTGCTGAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LPCVYFTVTSKP*ERYVLDLLKPR
Trigger: CCTGGGCTTCAGCAGGTCTAGCACATACCGCTCCAAGGGCTTTGACGTCACAGTGAAGTACACACAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465326.5
CDS CAA 90 bp GCAAGCCGGCTCCACACATCTGCATGGAGAAAACGTTGGGGATGTTaGCTTGTGTCACCAGGGAGTCGAAGAAGGTCTCCAGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: ASRLHTSAWRKRWGC*LVSPGSRRRSPENL
Trigger: CAAGTTCTCTGGAGACCTTCTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS GCA 72 bp GTCAAAGTACGTGTCTATGTAGGAGTGCGGGGTTCCTaGCACGGCAAAGTTACTGCTTCCAGTGTCAACGAG +
Preference number: 6 (lower is better)
Translates to: VKVRVYVGVRGS*HGKVTASSVNE
Trigger: CTCGTTGACACTGGAAGCAGTAACTTTGCCGTGGCAGGAACCCCGCACTCCTACATAGACACGTACTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000470864.5
ENST00000487994.5
CDS CAA 90 bp CGCTCAAAGACTGAGCGGGGACACAGTTGCTGGCTACATCCTCTGTaGAGAAAGGCCCGGAAATTTCAGACACTGCAGCACCTGCAATTT +
Preference number: 6 (lower is better)
Translates to: RSKTERGHSCWLHPL*RKARKFQTLQHLQF
Trigger: AAATTGCAGGTGCTGCAGTGTCTGAAATTTCCGGGCCTTTCTCAACAGAGGATGTAGCCAGCAACTGTGTCCCCGCTCAGTCTTTGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000466122.5
CDS GCA 72 bp TCCACACATCTGCATGGAGAAAACGTTGGGGATGTTTaGTTGTGTCACCAGGGAGTCGAAGAAGGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: STHLHGENVGDV*LCHQGVEEGLQ
Trigger: CTGGAGACCTTCTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp CTCCACACATCTGCATGGAGAAAACGTTGGGGATGTTaGCTTGTGTCACCAGGGAGTCGAAGAAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LHTSAWRKRWGC*LVSPGSRRRSP
Trigger: TGGAGACCTTCTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS TCA 72 bp CACCTGCAATTTCTGAGGCAGGATTGTGATACGGAATaGCCTGCTGGAGTTCTCGTCTCTCAGGTAGATGGA +
Preference number: 6 (lower is better)
Translates to: HLQFLRQDCDTE*PAGVLVSQVDG
Trigger: TCCATCTACCTGAGAGACGAGAACTCCAGCAGGTCATTCCGTATCACAATCCTGCCTCAGAAATTGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328735.10
CDS CCA 72 bp CTTGGAGCGGTATGTGCTAGACCTCAAACGCAGAAGTaGGATGCGTCACATCTGATTCAGCCAAGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: LGAVCARPQTQK*DASHLIQPRRN
Trigger: GTTTCTTCTTGGCTGAATCAGATGTGACGCATCCCACTTCTGCGTTTGAGGTCTAGCACATACCGCTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466122.5
CDS CAA 72 bp CTTCCTTGTGTGTACTTCACTGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGACCTCTCTGTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: LPCVYFTVTSKP*ERYVLDLSVSK
Trigger: CTTTGACACAGAGAGGTCTAGCACATACCGCTCCAAGGGCTTTGACGTCACAGTGAAGTACACACAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000470864.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp ACACATCTGCATGGAGAAAACGTTGGGGATGTTTGCTaGTGTCACCAGGGAGTCGAAGAAGGTCTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: THLHGENVGDVC*CHQGVEEGLQR
Trigger: TCTCTGGAGACCTTCTTCGACTCCCTGGTGACACAAGCAAACATCCCCAACGTTTTCTCCATGCAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp CTTCCTTGTGTGTACTTCACTGTGACGTCAAAGCCCTaGGAGCGGTATGTGCTAGACCTCAAACGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: LPCVYFTVTSKP*ERYVLDLKRRS
Trigger: ACTTCTGCGTTTGAGGTCTAGCACATACCGCTCCAAGGGCTTTGACGTCACAGTGAAGTACACACAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466122.5
CDS GCA 72 bp TGCAGAAACTTCTATTCACCTCAAAAGGTTCCTTTATaGCCCTTTCCCTTCTGGTCCCCAGAAGCAACCACT +
Preference number: 6 (lower is better)
Translates to: CRNFYSPQKVPL*PFPFWSPEATT
Trigger: AGTGGTTGCTTCTGGGGACCAGAAGGGAAAGGGGCATAAAGGAACCTTTTGAGGTGAATAGAAGTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470864.5
CDS GCA 72 bp CATGGGCTGAATGTAAAGCCTAAAGATAAGATTCCATaGCAGATGAGCAGACCAGAAAATATGCGTGCTGAG +
Preference number: 6 (lower is better)
Translates to: HGLNVKPKDKIP*QMSRPENMRAE
Trigger: CTCAGCACGCATATTTTCTGGTCTGCTCATCTGGCATGGAATCTTATCTTTAGGCTTTACATTCAGCCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475618.1
CDS CCA 72 bp TTCCAGTGTCAACGAGAATCTGTAGCTGGTGAGTTTTaGCATGTGTGCCAAACCAAGATGCAGAAACTTCTA +
Preference number: 6 (lower is better)
Translates to: FQCQRESVAGEF*HVCQTKMQKLL
Trigger: TAGAAGTTTCTGCATCTTGGTTTGGCACACATGCCAAAACTCACCAGCTACAGATTCTCGTTGACACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470864.5
CDS CAA 90 bp GATGGCCTTGTCTGCGTTATACTCTCTGCAGTCCAGATTAAGGCTTaGGCCTCCAATTTCCAATTTCAGAATTTCTATCTGGTAGTACCA +
Preference number: 6 (lower is better)
Translates to: DGLVCVILSAVQIKA*ASNFQFQNFYLVVP
Trigger: TGGTACTACCAGATAGAAATTCTGAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGACTGCAGAGAGTATAACGCAGACAAGGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CCA 72 bp AATAGGGGTATACCAGATGTCTCCTTTATACAAACTTaGTTCAATTCCACCCAAGACAAGACTACCTCCGTT +
Preference number: 6 (lower is better)
Translates to: NRGIPDVSFIQT*FNSTQDKTTSV
Trigger: AACGGAGGTAGTCTTGTCTTGGGTGGAATTGAACCAAGTTTGTATAAAGGAGACATCTGGTATACCCCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000491838.5
CDS CCA 72 bp TCTGCGTTATACTCTCTGCAGTCCAGATTAAGGCTTTaGCCTCCAATTTCCAATTTCAGAATTTCTATCTGG +
Preference number: 6 (lower is better)
Translates to: SALYSLQSRLRL*PPISNFRISIW
Trigger: CCAGATAGAAATTCTGAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGACTGCAGAGAGTATAACGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5
CDS CAA 72 bp GTCTGCGTTATACTCTCTGCAGTCCAGATTAAGGCTTaGGCCTCCAATTTCCAATTTCAGAATTTCTATCTG +
Preference number: 6 (lower is better)
Translates to: VCVILSAVQIKA*ASNFQFQNFYL
Trigger: CAGATAGAAATTCTGAAATTGGAAATTGGAGGCCAAAGCCTTAATCTGGACTGCAGAGAGTATAACGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000328735.10
ENST00000330333.11
ENST00000347667.5
ENST00000463674.5
ENST00000465326.5
ENST00000466122.5
ENST00000487994.5
ENST00000491838.5