RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BACE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186318

Ensembl transcript IDs: ENST00000313005.10, ENST00000313005.11, ENST00000392937.10, ENST00000428381.6, ENST00000445823.6, ENST00000509916.5, ENST00000510630.5, ENST00000510915.6, ENST00000513780.5, ENST00000514464.2, ENST00000528053.5, ENST00000530824.1, ENST00000679585.1, ENST00000680271.1, ENST00000680681.1, ENST00000680800.1, ENST00000680971.1, ENST00000681753.1

Found 1045 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCAGATG +
Preference number: 1 (lower is better)
Translates to: AKSSCCWRRQRRQRH*HTMRQSGSMKRAQM
Trigger: CATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR CCA 90 bp GCGCAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCAGATGGCAGCCATGACATAGGCTAT +
Preference number: 1 (lower is better)
Translates to: AQAAEAAPLTHHEAE*QHEEGADGSHDIGY
Trigger: ATAGCCTATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR CCA 90 bp GGGAAGCCAGCACCAGGTAGAGGCCTGTCTCCCTTCCCAAGTCACTaGGAGCAGCAGCCCTTCCTTGTATACCCAGCTGGTAGGAGTGAT +
Preference number: 1 (lower is better)
Translates to: GKPAPGRGLSPFPSH*EQQPFLVYPAGRSD
Trigger: ATCACTCCTACCAGCTGGGTATACAAGGAAGGGCTGCTGCTCCCAGTGACTTGGGAAGGGAGACAGGCCTCTACCTGGTGCTGGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp GCCAGCACTTCAGACTGGTTGAGGGGGAAGCCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGAACGTGGGTCTGCTTTACCAGAGAG +
Preference number: 1 (lower is better)
Translates to: ASTSDWLRGKPAPQS*REKRLGTWVCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR GCA 90 bp AAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTaGACTGGGGAGAGGGCAAATGTGAATGGACAGCTCTCATTGTCA +
Preference number: 1 (lower is better)
Translates to: KVTKGPSTAAVLNSS*TGERANVNGQLSLS
Trigger: TGACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CCA 90 bp ACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTCTGTCCACTaGCCTGCAATGATAAAAGACATGCAGACCAATGGGAAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: TQVLATPVLPSPSVH*PAMIKDMQTNGKGP
Trigger: GGGGCCTTTCCCATTGGTCTGCATGTCTTTTATCATTGCAGGCCAGTGGACAGAGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CCA 90 bp TGGATGACTGTGAGATGGCAAACTTGTAACAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGATGG +
Preference number: 1 (lower is better)
Translates to: WMTVRWQTCNSRLGT*PHLPLAAGIAAEGW
Trigger: CCATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR CCA 90 bp GACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCACTaGGGAGAGGGCAAATGTGAATGGACAGCTCTCATTGTCATAGAG +
Preference number: 1 (lower is better)
Translates to: DKRAFHRCRPELIVH*GEGKCEWTALIVIE
Trigger: CTCTATGACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp CAGCCTCACCATGTGGCAGCTGACAGGGTCACTATAGACTCAGTCTaGTACCCTTGCATCAAGAGCTTCCCAAGGTACCCAGGTAACTCT +
Preference number: 1 (lower is better)
Translates to: QPHHVAADRVTIDSV*YPCIKSFPRYPGNS
Trigger: AGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGAGTCTATAGTGACCCTGTCAGCTGCCACATGGTGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CCA 90 bp CCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTAT +
Preference number: 1 (lower is better)
Translates to: PSPLSGNSTLSRSHT*KQRVDQVGVGCSGY
Trigger: ATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR TCA 90 bp GAGGGCGCAGATGGCAGCCATGACATAGGCTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAATGTTGTAGCCACAGTCTTCCATGTC +
Preference number: 1 (lower is better)
Translates to: EGADGSHDIGYGHEG*LICLWNVVATVFHV
Trigger: GACATGGAAGACTGTGGCTACAACATTCCACAGACAGATGAGTCAACCCTCATGACCATAGCCTATGTCATGGCTGCCATCTGCGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR GCA 90 bp ATCAGGGAACTTCTCCGTGGAGGAGGCTGCCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTTGGGCAAACGAAGGTTGGTGGTGCC +
Preference number: 1 (lower is better)
Translates to: IRELLRGGGCLDGFD*SFKHFLGQTKVGGA
Trigger: GGCACCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAGAAGTTCCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR GCA 90 bp TGCTACCCTTGCATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTaGTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGT +
Preference number: 1 (lower is better)
Translates to: CYPCIKSFPRYPGNS*CSGFPTEVTNPGSG
Trigger: ACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCAAGGGTAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp CATGTGGCAGCTGACAGGGTCACTATAGACTCAGTCTGCTACCCTTaGATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: HVAADRVTIDSVCYP*IKSFPRYPGNSCCS
Trigger: AGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGAGTCTATAGTGACCCTGTCAGCTGCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp TACCCTTGCATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTGCTaGTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCAT +
Preference number: 1 (lower is better)
Translates to: YPCIKSFPRYPGNSC*SGFPTEVTNPGSGH
Trigger: ATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCAAGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp CTGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTaGATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGAT +
Preference number: 1 (lower is better)
Translates to: LESPLLQEDKCFGEL*MGASASVLLFLVQD
Trigger: ATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 90 bp GCAGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTaGTTACCGAAAGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACT +
Preference number: 1 (lower is better)
Translates to: ADLKPGAHPLSNQMP*LPKASRSLSIVLAT
Trigger: AGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR CCA 90 bp CTGACTCAGTATTCTTGTTTTATTGGTTTATGGCTTGTGGGCAGCTaGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCT +
Preference number: 1 (lower is better)
Translates to: LTQYSCFIGLWLVGS*LRPGTPEALLVFPS
Trigger: AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCACAAGCCATAAACCAATAAAACAAGAATACTGAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR GCA 90 bp CTAGTCCATTTCCTTAAGGCTCATGTATGCAGATTTAAAGCCTGGTaGTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCTC +
Preference number: 1 (lower is better)
Translates to: LVHFLKAHVCRFKAW*SPTVQPDALLTESL
Trigger: GAGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCATACATGAGCCTTAAGGAAATGGACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR GCA 90 bp TTTGGTTTGGCTCAGCCTCTAGTCCATTTCCTTAAGGCTCATGTATaGAGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCC +
Preference number: 1 (lower is better)
Translates to: FGLAQPLVHFLKAHV*RFKAWCSPTVQPDA
Trigger: GGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCATACATGAGCCTTAAGGAAATGGACTAGAGGCTGAGCCAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR CCA 90 bp AAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATaGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGT +
Preference number: 1 (lower is better)
Translates to: KAHSCRRISVLESCA*ERAPQCYSFLFRIS
Trigger: ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CCA 90 bp CCTCTAGTCCATTTCCTTAAGGCTCATGTATGCAGATTTAAAGCCTaGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGC +
Preference number: 1 (lower is better)
Translates to: PLVHFLKAHVCRFKA*CSPTVQPDALLTES
Trigger: GCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCATACATGAGCCTTAAGGAAATGGACTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR CCA 90 bp TGCCGTCCTGAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATaGACAGCTCTCATTGTCATAGAGGAGTTAACAAAAAGAACTTCC +
Preference number: 1 (lower is better)
Translates to: CRPELIVHWGEGKCE*TALIVIEELTKRTS
Trigger: GGAAGTTCTTTTTGTTAACTCCTCTATGACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 90 bp CTATCACCTCACAGATGGATTCTTCCTCATTTCTCTTGCCTCACTTaGCCAGGTTTATTGACTAGCGTCAGTTTAAGGAGCTGGACTTCC +
Preference number: 1 (lower is better)
Translates to: LSPHRWILPHFSCLT*PGLLTSVSLRSWTS
Trigger: GGAAGTCCAGCTCCTTAAACTGACGCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAGAATCCATCTGTGAGGTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 90 bp CATCCTTGCCTATCACCTCACAGATGGATTCTTCCTCATTTCTCTTaGCTCACTTGCCCAGGTTTATTGACTAGCGTCAGTTTAAGGAGC +
Preference number: 1 (lower is better)
Translates to: HPCLSPHRWILPHFS*LTCPGLLTSVSLRS
Trigger: GCTCCTTAAACTGACGCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 90 bp GCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAGGAACCTaGTGTTGCTCTAAGGCCATTCTGCTTTGGTTTGGCTCAGCCTCT +
Preference number: 1 (lower is better)
Translates to: AQGCFQIQYKNHLGT*CCSKAILLWFGSAS
Trigger: AGAGGCTGAGCCAAACCAAAGCAGAATGGCCTTAGAGCAACAGCAGGTTCCTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR TCA 90 bp GGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: GLKFQAAEFPDLNLR*PRVFPPAECFFLLF
Trigger: AAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR TCA 90 bp GCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAATGGAGGGGCCATTAGAGAGGGTAGG +
Preference number: 1 (lower is better)
Translates to: ALYFSYSWYNASATV*CFSQINGGAIREGR
Trigger: CCTACCCTCTCTAATGGCCCCTCCATTTATTTGACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CCA 90 bp ATATTATGCAGAAACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTaGGGGATGCAGATTGTAGGGAAGATGATGTTTAGTTTGGCCTTG +
Preference number: 1 (lower is better)
Translates to: ILCRNSLFPLILQFL*GMQIVGKMMFSLAL
Trigger: CAAGGCCAAACTAAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCTGCATAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 2 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR-3UTR CCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR-3UTR GCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 2 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
3UTR-3UTR GCA 90 bp ACCGCTGCCGTCCTGAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATGGAGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: TAAVLNSSCTGERANVNGGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...TCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp GAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCATACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: EAAPLTHHEAEWQHEEGAYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAG +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSSRSHT*KQRVDQ
Trigger: CTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCT...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAATGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHECSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp ATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGTTTTCGGGCCCGATCGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 2 (lower is better)
Translates to: IVHMASADSKANSFSGPIAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...GATCGGGCCCGAAAACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCACCCTGCCACCTTTCTaGAGTAGCATTCAGCCTCAC +
Preference number: 2 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRTLPPF*SSIQPH
Trigger: GTGAGGCTGAATGCTACTTCAGAAAGGTGGCAGGGT...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRADRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GTCTTGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGATCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 2 (lower is better)
Translates to: VLGRGHIFHWPQVLLRKDLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...ATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp GAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCATCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 2 (lower is better)
Translates to: EAAPLTHHEAEWQHEEGASPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCGGGAGAGGGCAAATGTaGATGGACAGCTCTCATTGT +
Preference number: 2 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRGRGQM*MDSSHC
Trigger: ACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCC...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAACAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: CRPELIVHMASADSKANSASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...CGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp AGGTATTGCTGCGGAAGGATGGTGATGCGGAAGGACTGGTTGGTAACCTCACCCACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: RYCCGRMVMRKDWLVTSPTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...GGGTGAGGTTACCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGCAATACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp ACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGTGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: TKGPSTAAVLNSSCTWQAWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...CGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTCATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCATGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTCAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCTGCTGAAATCCAACTaGAAAACCCTGCCACCTTTC +
Preference number: 2 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRLLKSN*KTLPPF
Trigger: GAAAGGTGGCAGGGTTTTGCAGTTGGATTTCAGCAG...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 2 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR TCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTCAGTAGTTCTGAGTTaGCCAAAAGCCACCCCCTTG +
Preference number: 2 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELSVVLS*PKATPL
Trigger: CAAGGGGGTGGCTTTTGGTCAACTCAGAACTACTGA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTCAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAA +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSQVGVG*SGYTRK
Trigger: TTTCCTAGTATACCCACTGCATCCTACTCCTACCTG...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp CACTGGCCGCAGGTATTGCTGCGGAAGGATGGTGATGCGGAAGGACTGGTTGGTTTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: HWPQVLLRKDGDAEGLVGLGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...ACCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGCAATACCTGCGGCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSSAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR CCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SCAWERAPQCYSFLFRISQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR CCA 90 bp ATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGTTTTCGGGCCCGATCGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 2 (lower is better)
Translates to: IVHMASADSKANSFSGPIANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...GATCGGGCCCGAAAACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCAAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR CAA 90 bp AGGGGGCTTAACTGCTTCCCAGTAAAGACCCTGGAAAGCCCACTCTaGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGCGAGC +
Preference number: 2 (lower is better)
Translates to: RGLNCFPVKTLESPL*QEDKCFGELCMGAS
Trigger: GCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCAGGGTCTTTACTGGGAAGCAGTTAAGCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCACTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 2 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR-3UTR GCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR GCA 90 bp GACACACGCCAAGGTAACCTGCGTGTGATGCCAGTACTTCTGAAACTAAGAAAAGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: DTRQGNLRVMPVLLKLRKGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...TTTTCTTAGTTTCAGAAGTACTGGCATCACACGCAGGTTACCTTGGCGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAADRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CAGGTATTGCTGCGGAAGGATGGTGATGCGGAAGGACTGGTTGGTAACCTCACCAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 2 (lower is better)
Translates to: QVLLRKDGDAEGLVGNLTKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...GGTGAGGTTACCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGCAATACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: SHKALYFSYSWYNASATVGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 2 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 2 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR-3UTR TCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACTGTTGACTTGGGTTTaGGGCAACTGTTACTACCCT +
Preference number: 2 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSLLTWV*GNCYYP
Trigger: AGGGTAGTAACAGTTGCCTCAAACCCAAGTCAACAG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCATTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCATCTTCTGAGATGGGATaGTATCTTGGAGATGAGGTC +
Preference number: 2 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPSSEMG*YLGDEV
Trigger: GACCTCATCTCCAAGATAGCATCCCATCTCAGAAGA...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp ACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGTGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 2 (lower is better)
Translates to: TKGPSTAAVLNSSCTWQACHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...CGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR GCA 90 bp CATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 2 (lower is better)
Translates to: HQQSHHAAGAGSGGSATDLDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...GTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: ALPTNTGTVVYYARTDREAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR GCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACACTATAGACTCAGTCTaGTACCCTTGCATCAAGAGC +
Preference number: 2 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNTIDSV*YPCIKS
Trigger: GCTCTTGATGCAAGGGTAGCAGACTGAGTCTATAGT...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: ALPTNTGTVVYYARTDREGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CAA 90 bp TTGGAGAGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTaGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCT +
Preference number: 2 (lower is better)
Translates to: LESCAWERAPQCYSF*FRISQKATQVLATP
Trigger: AGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CAA 90 bp CCCACAGGTTTTTCCTGGGCCAAGTCTTCCTTTGCTGCCACTGTCTaGGCTTCTAATCAAGCTCTGACAGGCCAACATTGTGAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: PTGFSWAKSSFAATV*ASNQALTGQHCEVL
Trigger: GAGGACTTCACAATGTTGGCCTGTCAGAGCTTGATTAGAAGCCAAGACAGTGGCAGCAAAGGAAGACTTGGCCCAGGAAAAACCTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTTAACTTTCTGCTGCTaGAATCCAACTGCAAAACCC +
Preference number: 2 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELLTFCC*NPTAKP
Trigger: GGGTTTTGCAGTTGGATTTCAGCAGCAGAAAGTTAA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AAACCATCAGGGAACTTCTCCGTGGAGGAGGCTGCCTTGATGGATTTGACTGCAGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 2 (lower is better)
Translates to: KPSGNFSVEEAALMDLTAVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...TGCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAGAAGTTCCCTGATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR GCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGTCAGTCTGCTACCCTTaGATCAAGAGCTTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQSVCYP*IKSFPR
Trigger: CCTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGA...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAACCAACTGCAAAACCCTaGCACCTTTCTGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEPTAKP*HLSEVA
Trigger: TGCTACTTCAGAAAGGTGGCAGGGTTTTGCAGTTGG...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTGTATTCTTGTTTTATTaGTTTATGGCTTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSVFLFY*FMACGQ
Trigger: CTGCCCACAAGCCATAAACCAATAAAACAAGAATAC...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 2 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPTKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 2 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAATTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTGTTAGGATATTTCAGTaGTGCCTATCATATGTAGAA +
Preference number: 2 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSVRIFQ*CLSYVE
Trigger: TTCTACATATGATAGGCAGCACTGAAATATCCTAAC...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHDRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GTCCATTTTCAGATCCTGTCCATTGATCTCCACCCGCACAATGATCACCTCATACCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: VHFQILSIDLHPHNDHLIPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...TATGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR GCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACATTGACACTAGCTTTTaGACAACTGTTGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNIDTSF*TTVDLG
Trigger: ACCCAAGTCAACAGTTGTGCAAAAGCTAGTGTCAAT...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAATRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCATTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 2 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR CCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTTTGAGTTTTATGCCCTaGAAAGGGCTGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPLSFMP*KGLGKS
Trigger: GCTTTTTCCCAGCCCTTTCCAGGGCATAAAACTCAA...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCA +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSDLNLR*PRVFPP
Trigger: TGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAATKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHCILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 2 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCCAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAA +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSQVGVG*SGYTRK
Trigger: TTTCCTAGTATACCCACTGCATCCTACTCCTACCTG...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGCAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: WKAHSCRRISVLESCAWEQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR GCA 90 bp TGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGCATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 2 (lower is better)
Translates to: CRPELIVHMASADSKANSHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...CGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCATACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGAGAATTTAAAGGAATaGTGGACAAAGGTTCAGGGC +
Preference number: 2 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEENLKE*WTKVQG
Trigger: GCCCTGAACCTTTGTCCACCATTCCTTTAAATTCTC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAATGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKCFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAACFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CAA 90 bp AGATGGATTCTTCCTCATTTCTCTTGCCTCACTTGCCCAGGTTTATaGACTAGCGTCAGTTTAAGGAGCTGGACTTCCTGGGACCTCCTT +
Preference number: 2 (lower is better)
Translates to: RWILPHFSCLTCPGL*TSVSLRSWTSWDLL
Trigger: AAGGAGGTCCCAGGAAGTCCAGCTCCTTAAACTGACGCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAGAATCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: QCYSFLFRISQKATQVLACILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCATGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LATSYSLIGRNPGRGYRACILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 2 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGTTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: WKAHSCRRISVLESCAWEFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGTTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 2 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLNSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAG +
Preference number: 2 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPSRSHT*KQRVDQ
Trigger: CTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCT...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCA +
Preference number: 2 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWDLNLR*PRVFPP
Trigger: TGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTC...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRCILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 2 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 2 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAATCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CACTTTCTTTGGTTAATGAAATGTTACTGTCTCCAGGTTAGTAGCTGTCATGAAGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: HFLWLMKCYCLQVSSCHEGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...TTCATGACAGCTACTAACCTGGAGACAGTAACATTTCATTAACCAAAGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 2 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAAT +
Preference number: 2 (lower is better)
Translates to: SCAWERAPQCYSFLFRISASATV*CFSQIN
Trigger: ATTTATTTGACTAAAGCATCACACAGTGGCACTAGC...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGTGCTATCGAAGGGGTTaGGTTTTATGCCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: QCYSFLFRISQKATQVLACYRRG*VLCPGK
Trigger: CTTTCCAGGGCATAAAACTCAACCCCTTCGATAGCA...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: ALPTNTGTVVYYARTDREYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR GCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTTGTTTTGGAGAGTTGTaGATGGGAGCGAGCGCCTCA +
Preference number: 2 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPCFGEL*MGASAS
Trigger: TGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACA...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTTACCCAGGTAACTCTTaGTGCTCTGGGTTTCCAACA +
Preference number: 2 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSYPGNS*CSGFPT
Trigger: TGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTA...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCATTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 2 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGCTCTGTCCACTGGCCTaGAATGATAAAAGACATGCA +
Preference number: 2 (lower is better)
Translates to: QCYSFLFRISQKATQVLALCPLA*NDKRHA
Trigger: TGCATGTCTTTTATCATTGCAGGCCAGTGGACAGAG...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATGAGAATTTAAAGGAATaGTGGACAAAGGTTCAGGGC +
Preference number: 2 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHENLKE*WTKVQG
Trigger: GCCCTGAACCTTTGTCCACCATTCCTTTAAATTCTC...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGAGGGTAGGAAGGCAATaGAACCACTCTGAATTATGT +
Preference number: 2 (lower is better)
Translates to: QCYSFLFRISQKATQVLARVGRQ*NHSELC
Trigger: ACATAATTCAGAGTGGTTTCATTGCCTTCCTACCCT...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR GCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCATTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGTCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: ALPTNTGTVVYYARTDRENSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFNSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTTTGAGTTTTATGCCCTaGAAAGGGCTGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPLSFMP*KGLGKS
Trigger: GCTTTTTCCCAGCCCTTTCCAGGGCATAAAACTCAA...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTGCAGTGAGTGGAGAATaGGACAGTCATTTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPAVSGE*DSHFSG
Trigger: TCCTGAAAAATGACTGTCCCATTCTCCACTCACTGC...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVTKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTTAGGATATTTCAGTaGTGCCTATCATATGTAGAA +
Preference number: 2 (lower is better)
Translates to: ALPTNTGTVVYYARTDREVRIFQ*CLSYVE
Trigger: TTCTACATATGATAGGCAGCACTGAAATATCCTAAC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 2 (lower is better)
Translates to: QCYSFLFRISQKATQVLANSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CAA 90 bp ATGAAACTATGTATATTATGCAGAAACAGTCTGTTCCCCCTCATCTaGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT +
Preference number: 2 (lower is better)
Translates to: MKLCILCRNSLFPLI*QFLWGMQIVGKMMF
Trigger: AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCTGCATAATATACATAGTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCGCATCAGCTGTTGAATaGATGTTCAACATTATGCTT +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVASAVE*MFNIML
Trigger: AAGCATAATGTTGAACATTCATTCAACAGCTGATGC...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR GCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCGTTAGGATATTTCAGTaGTGCCTATCATATGTAGAA +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVVRIFQ*CLSYVE
Trigger: TTCTACATATGATAGGCAGCACTGAAATATCCTAAC...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCTATTTCTCATACTCTTaGTATAATGCTAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: CISHTLGIMLVPLCDALVYFSYS*YNASAT
Trigger: AGTGGCACTAGCATTATACCAAGAGTATGAGAAATA...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CCA 90 bp CACTTTCTTTGGTTAATGAAATGTTACTGTCTCCAGGTTAGTAGCTGTCATGAAGTATTCTTGTTTTATTaGTTTATGGCTTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: HFLWLMKCYCLQVSSCHEVFLFY*FMACGQ
Trigger: CTGCCCACAAGCCATAAACCAATAAAACAAGAATAC...TTCATGACAGCTACTAACCTGGAGACAGTAACATTTCATTAACCAAAGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR TCA 72 bp TCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGTGGCAGCATGAAGAGG +
Preference number: 3 (lower is better)
Translates to: SCCWRRQRRQRH*HTMRQSGSMKR
Trigger: CCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR CCA 72 bp GCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCAGATGGCAGCCATGAC +
Preference number: 3 (lower is better)
Translates to: AEAAPLTHHEAE*QHEEGADGSHD
Trigger: GTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
3UTR-3UTR CAA 90 bp GCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTAGGGGTGGTGCCTGCTaGCCAGCACACCAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: AAVLNSSCTWQALTAKPIRGGAC*PAHQLL
Trigger: GAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCCT...AATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp GAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCACTTGTAACAGTCGTCTaGGGACGTGGCCACATCTTC +
Preference number: 3 (lower is better)
Translates to: EAAPLTHHEAEWQHEEGALVTVV*GRGHIF
Trigger: GAAGATGTGGCCACGTCCCAAGACGACTGTTACAAG...TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR GCA 72 bp AAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTaGACTGGGGAGAGGGCAAATGTGAATGGACAGCTC +
Preference number: 3 (lower is better)
Translates to: KGPSTAAVLNSS*TGERANVNGQL
Trigger: GAGCTGTCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 72 bp ACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTTCAGCAGGGAGATGTC +
Preference number: 3 (lower is better)
Translates to: TTEVWSRGISIF*PWASSLQQGDV
Trigger: GACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
3UTR CCA 72 bp GTAACAGTCGTCTTGGGACGTGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGGAAGGATGGTGATGCG +
Preference number: 3 (lower is better)
Translates to: VTVVLGRGHIFH*PQVLLRKDGDA
Trigger: CGCATCACCATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp TGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGATGGTGTTCAGATCCTGTCCATaGATCTCCACCCGCACAATG +
Preference number: 3 (lower is better)
Translates to: WDVATSSTGRRYCCGRMVFRSCP*ISTRTM
Trigger: CATTGTGCGGGTGGAGATCAATGGACAGGATCTGAA...CACCATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACGCTTCAAACACTTTCTaGGGCAAACGAAGGTTGGTG +
Preference number: 3 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHASNTF*GKRRLV
Trigger: CACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAGC...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp CACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCAGATGGCAGCCATGACATAAGCAGCAGCCCTTCCTaGTATACCCAGCTGGTAGGA +
Preference number: 3 (lower is better)
Translates to: HHEAEWQHEEGADGSHDISSSPS*YTQLVG
Trigger: TCCTACCAGCTGGGTATACAAGGAAGGGCTGCTGCT...TATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CAA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACGCACCAATGTTAGGCTaGTTTATACAGTCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHAPMLG*FIQSLS
Trigger: AGACAGGGACTGTATAAACAAGCCTAACATTGGTGC...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
3UTR-3UTR CAA 90 bp TGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGTTGGGCAAACGAAGGTaGGTGGTGCCACTGTCCACA +
Preference number: 3 (lower is better)
Translates to: CRPELIVHMASADSKANSLGKRR*VVPLST
Trigger: TGTGGACAGTGGCACCACCAACCTTCGTTTGCCCAA...CGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGCTCAGTCTGCTACCCTaGCATCAAGAGCTTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSLSLLP*HQELPK
Trigger: CTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGAG...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CCA 72 bp GTGAGATGGCAAACTTGTAACAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCCGCAGGTATTGCTGCG +
Preference number: 3 (lower is better)
Translates to: VRWQTCNSRLGT*PHLPLAAGIAA
Trigger: CGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACTGTTACAAGTTTGCCATCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTGCACCAATGTTAGGCTaGTTTATACAGTCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSAPMLG*FIQSLS
Trigger: AGACAGGGACTGTATAAACAAGCCTAACATTGGTGC...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGCTTCCCATCTCACTTTaGGTCAGGCTGCAACCACAG +
Preference number: 3 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQLPISL*VRLQPQ
Trigger: CTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAAG...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGTCAGTAGTTCTGAGTaGACCAAAAGCCACCCCCTT +
Preference number: 3 (lower is better)
Translates to: WSRGISIFCPWASSLQQGVSSSE*TKSHPL
Trigger: AAGGGGGTGGCTTTTGGTCAACTCAGAACTACTGAC...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 72 bp ACCTGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAAACCCAGCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: TWKQRVDQVGVG*SGYTRKTQLFP
Trigger: TGGGAAGAGCTGGGTTTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCAGATGGCAGCCATGACATAACTGTTGACTTGGGTTaGAGGCAACTGTTACTACCC +
Preference number: 3 (lower is better)
Translates to: HHEAEWQHEEGADGSHDITVDLG*RQLLLP
Trigger: GGGTAGTAACAGTTGCCTCAAACCCAAGTCAACAGT...TATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 72 bp AAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTaGTTACCGAAAGCCTCCAGAAGCCTCAGTATTGTT +
Preference number: 3 (lower is better)
Translates to: KPGAHPLSNQMP*LPKASRSLSIV
Trigger: AACAATACTGAGGCTTCTGGAGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR GCA 72 bp CATGTGGCAGCTGACAGGGTCACTATAGACTCAGTCTaGTACCCTTGCATCAAGAGCTTCCCAAGGTACCCA +
Preference number: 3 (lower is better)
Translates to: HVAADRVTIDSV*YPCIKSFPRYP
Trigger: TGGGTACCTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGAGTCTATAGTGACCCTGTCAGCTGCCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CCA 72 bp ATGGGTGTATACCAGAGACTGCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATCATGCTCCCTCCGACA +
Preference number: 3 (lower is better)
Translates to: MGVYQRLPVYSE*SIPPMIMLPPT
Trigger: TGTCGGAGGGAGCATGATCATTGGAGGTATCGACCACTCGCTGTACACAGGCAGTCTCTGGTATACACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR-3UTR CAA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAACTGCCTTTCCTAGCTTaGATCCCACTATTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGELPFLA*IPLFPV
Trigger: GACAGGGAATAGTGGGATCAAAGCTAGGAAAGGCAG...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCCTTCCCATCTCACTTTaGGTCAGGCTGCAACCACAG +
Preference number: 3 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSLPISL*VRLQPQ
Trigger: CTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAAG...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTGCACAACTGTTGACTaGGGTTTGAGGCAACTGTTA +
Preference number: 3 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELCTTVD*GLRQLL
Trigger: TAACAGTTGCCTCAAACCCAAGTCAACAGTTGTGCA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR GCA 72 bp ATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTGCTaGTCTGGGTTTCCAACAGAGGTTACCAATCCAGGC +
Preference number: 3 (lower is better)
Translates to: IKSFPRYPGNSC*SGFPTEVTNPG
Trigger: GCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CCA 72 bp TTATCAGGTAATTCCACACTTAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGC +
Preference number: 3 (lower is better)
Translates to: LSGNSTLSRSHT*KQRVDQVGVGC
Trigger: GCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCTAAGTGTGGAATTACCTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CCA 72 bp TCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTaGCGACCCCTGTTCTCCCTTCTCCCTCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: SCSGSVRKQHKC*RPLFSLLPLST
Trigger: AGTGGACAGAGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGAGCAGGGAAACAAGCTaGGTCTCTTCTCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: ALPTNTGTVVYYARTDRESRETS*VSSLPG
Trigger: CCCTGGCAGAGAAGAGACCAAGCTTGTTTCCCTGCT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCAGCAGGGAAACAAGCTaGGTCTCTTCTCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFSRETS*VSSLPG
Trigger: CCCTGGCAGAGAAGAGACCAAGCTTGTTTCCCTGCT...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATAGCAGGGAAACAAGCTaGGTCTCTTCTCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHSRETS*VSSLPG
Trigger: CCCTGGCAGAGAAGAGACCAAGCTTGTTTCCCTGCT...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR TCA 72 bp AGACATGCAGACCAATGGGAAAGGCCCCAAATGCAGTaGGTGGAGAATGGGACAGTCATTTTTCAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: RHADQWERPQMQ*VENGTVIFQEQ
Trigger: CTGCTCCTGAAAAATGACTGTCCCATTCTCCACTCACTGCATTTGGGGCCTTTCCCATTGGTCTGCATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 72 bp CCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTaGATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: PLLQEDKCFGEL*MGASASVLLFL
Trigger: AAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 72 bp CTTCTCCGTGGAGGAGGCTGCCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTTGGGCAAACGAAGGTT +
Preference number: 3 (lower is better)
Translates to: LLRGGGCLDGFD*SFKHFLGQTKV
Trigger: AACCTTCGTTTGCCCAAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR GCA 72 bp TGCATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTaGTGCTCTGGGTTTCCAACAGAGGTTACCAATCCA +
Preference number: 3 (lower is better)
Translates to: CIKSFPRYPGNS*CSGFPTEVTNP
Trigger: TGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CAA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCCTGCCTTTCCTAGCTTaGATCCCACTATTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCLPFLA*IPLFPV
Trigger: GACAGGGAATAGTGGGATCAAAGCTAGGAAAGGCAG...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATCTTCCCATCTCACTTTaGGTCAGGCTGCAACCACAG +
Preference number: 3 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHLPISL*VRLQPQ
Trigger: CTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAAG...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCCTTCCCATCTCACTTTaGGTCAGGCTGCAACCACAG +
Preference number: 3 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFLPISL*VRLQPQ
Trigger: CTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAAG...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR GCA 72 bp GCTCAGCCTCTAGTCCATTTCCTTAAGGCTCATGTATaGAGATTTAAAGCCTGGTGCTCACCCACTGTCCAA +
Preference number: 3 (lower is better)
Translates to: AQPLVHFLKAHV*RFKAWCSPTVQ
Trigger: TTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCATACATGAGCCTTAAGGAAATGGACTAGAGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR CCA 72 bp TCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATaGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: SCRRISVLESCA*ERAPQCYSFLF
Trigger: GAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGAGCAGGGAAACAAGCTaGGTCTCTTCTCTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRSRETS*VSSLPG
Trigger: CCCTGGCAGAGAAGAGACCAAGCTTGTTTCCCTGCT...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGCCTCTCCTACTGACTTaGGCCAGCAGGGAAACAAGC +
Preference number: 3 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRPLLLT*ASRETS
Trigger: GCTTGTTTCCCTGCTGGCCAAAGTCAGTAGGAGAGG...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGCACTATTCCCTGTCTTaGTACTCCCTCTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ALPTNTGTVVYYARTDREHYSLS*YSLSFS
Trigger: GGAGAAGGAGAGGGAGTACAAAGACAGGGAATAGTG...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTCTGCCTTTCCTAGCTTaGATCCCACTATTCCCTGTC +
Preference number: 3 (lower is better)
Translates to: PLLLLFPAAPICINSQSSLPFLA*IPLFPV
Trigger: GACAGGGAATAGTGGGATCAAAGCTAGGAAAGGCAG...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGGCACCAATGTTAGGCTaGTTTATACAGTCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWAPMLG*FIQSLS
Trigger: AGACAGGGACTGTATAAACAAGCCTAACATTGGTGC...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGATTCCTTTTAGCACCTaGGCTGCAAAGCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: QCYSFLFRISQKATQVLAIPFST*AAKLQR
Trigger: CCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAAT...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTAGTATTCTTGTTTTATaGGTTTATGGCTTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPSILVL*VYGLWA
Trigger: TGCCCACAAGCCATAAACCAATAAAACAAGAATACT...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTAAGTGTTTTGGAGAGTaGTGCATGGGAGCGAGCGCC +
Preference number: 3 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPKCFGE*CMGASA
Trigger: GGCGCTCGCTCCCATGCACAACTCTCCAAAACACTT...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CCA 72 bp CATTTCCTTAAGGCTCATGTATGCAGATTTAAAGCCTaGTGCTCACCCACTGTCCAACCAGATGCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: HFLKAHVCRFKA*CSPTVQPDALL
Trigger: AAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCATACATGAGCCTTAAGGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGCAGTGTTACTCTTTCTaGTTCAGGATCAGTCAGAAA +
Preference number: 3 (lower is better)
Translates to: WKAHSCRRISVLESCAWEQCYSF*FRISQK
Trigger: TTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 72 bp CTATCACCTCACAGATGGATTCTTCCTCATTTCTCTTaGCTCACTTGCCCAGGTTTATTGACTAGCGTCAGT +
Preference number: 3 (lower is better)
Translates to: LSPHRWILPHFS*LTCPGLLTSVS
Trigger: ACTGACGCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAGAATCCATCTGTGAGGTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR GCA 72 bp CTTCAAACACTTTCTTGGGCAAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCTTGTCATAGTTGTACT +
Preference number: 3 (lower is better)
Translates to: LQTLSWANEGWW*HCPQCSCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
3UTR CCA 72 bp GAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATaGACAGCTCTCATTGTCATAGAGGAGTTAACAAAA +
Preference number: 3 (lower is better)
Translates to: ELIVHWGEGKCE*TALIVIEELTK
Trigger: TTTTGTTAACTCCTCTATGACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR-3UTR CAA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTTTAGAGTTTATAATTTaGGGGCAGGAAGGAAGTAAC +
Preference number: 3 (lower is better)
Translates to: SCAWERAPQCYSFLFRISLEFII*GQEGSN
Trigger: GTTACTTCCTTCCTGCCCCAAAATTATAAACTCTAA...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR TCA 72 bp TTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: FQAAEFPDLNLR*PRVFPPAECFF
Trigger: AAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CCA 72 bp AGAAACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTaGGGGATGCAGATTGTAGGGAAGATGATGTTTAGT +
Preference number: 3 (lower is better)
Translates to: RNSLFPLILQFL*GMQIVGKMMFS
Trigger: ACTAAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
3UTR-3UTR CAA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCATTCCTTTTAGCACCTaGGCTGCAAAGCTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: CISHTLGIMLVPLCDALVIPFST*AAKLQR
Trigger: CCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAAT...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGCACCAATGTTAGGCTaGTTTATACAGTCCCTGTCT +
Preference number: 3 (lower is better)
Translates to: SHKALYFSYSWYNASATVAPMLG*FIQSLS
Trigger: AGACAGGGACTGTATAAACAAGCCTAACATTGGTGC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGATAGGGCATCAGCTGTaGAATGAATGTTCAACATTA +
Preference number: 3 (lower is better)
Translates to: ALPTNTGTVVYYARTDREIGHQL*NECSTL
Trigger: TAATGTTGAACATTCATTCAACAGCTGATGCCCTAT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR TCA 72 bp TTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAATGGAGGGGCCATTAGA +
Preference number: 3 (lower is better)
Translates to: FSYSWYNASATV*CFSQINGGAIR
Trigger: TCTAATGGCCCCTCCATTTATTTGACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR-3UTR CAA 90 bp CACTTTCTTTGGTTAATGAAATGTTACTGTCTCCAGGTTAGTAGCTGTCATGAAAGATGGGATGCTATCTaGGAGATGAGGTCTAAAACT +
Preference number: 3 (lower is better)
Translates to: HFLWLMKCYCLQVSSCHERWDAI*EMRSKT
Trigger: AGTTTTAGACCTCATCTCCAAGATAGCATCCCATCT...TTCATGACAGCTACTAACCTGGAGACAGTAACATTTCATTAACCAAAGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGGCAGCCGGATGCCGTaGTGGGTGCCGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEGSRMP*WVPWAG
Trigger: GCCTGCCCACGGCACCCAGCACGGCATCCGGCTGCC...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTCCTCTGGGCTCGCACTaGCCCACGTCCGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSPLGSH*PTSVPG
Trigger: GCCAGGGACGGACGTGGGCCAGTGCGAGCCCAGAGG...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGGCAGGGGCAGCCGGATaGCGTGCTGGGTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSAGAAG*RAGCRG
Trigger: CCCACGGCACCCAGCACGGCATCCGGCTGCCCCTGC...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp CATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: HQQSHHAAGAGSGGSATDRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...GTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGGATGCCGTGCTGGGTaGCGTGGGCAGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRGCRAG*RGQAAL
Trigger: GAGTGCTGCCTGCCCACGGCACCCAGCACGGCATCC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCGCAGGGGCAGCCGGATaGCGTGCTGGGTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLAGAAG*RAGCRG
Trigger: CCCACGGCACCCAGCACGGCATCCGGCTGCCCCTGC...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACCGTGCTGGGTGCCGTaGGCAGGCAGCACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSPCWVP*AGSTPA
Trigger: CGCGGGAGTGCTGCCTGCCCACGGCACCCAGCACGG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp TGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CHQQSHHAAGAGSGGSATGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...AGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCAGCCAGGGCAGGGCTTaGGCCATGGTGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSASQGRA*AMVGPG
Trigger: GCCGGGGCCCACCATGGCCCAAGCCCTGCCCTGGCT...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCGTCCCTGGCGCCTaGCCCCAAGTCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLSVPGA*PQVWVV
Trigger: CACCACCCAGACTTGGGGGCAGGCGCCAGGGACGGA...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTGCTTACCAGGTCGGTaGCCAGCTCCCCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSCLPGR*PAPLPT
Trigger: AGTGGGAAGGGGAGCTGGGCACCGACCTGGTAAGCA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: CHQQSHHAAGAGSGGSATRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...AGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp GAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCATCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EAAPLTHHEAEWQHEEGASAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGCCCACGTCCGTCCCTaGCGCCTGCCCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEAHVRP*RLPPSL
Trigger: CAGACTTGGGGGCAGGCGCCAGGGACGGACGTGGGC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGCAGGGCTTGGGCCATaGTGGGCCCCGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLAGLGP*WAPAFG
Trigger: CCCGAAGGCCGGGGCCCACCATGGCCCAAGCCCTGC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCAGCCGGATGCCGTGCTaGGTGCCGTGGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLSRMPC*VPWAGS
Trigger: GCTGCCTGCCCACGGCACCCAGCACGGCATCCGGCT...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAG +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHESRSHT*KQRVDQ
Trigger: CTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCT...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp TCCACCGCTGCCGTCCTGAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATTGTTGGCACGCACAGTaGCGTTGGGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: STAAVLNSSCTGERANVNCWHAQ*RWGHGG
Trigger: TCCCCCATGGCCCCAACGTCACTGTGCGTGCCAACA...ATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACAGCCCTGCCCCGACTTaGCCCTCAGGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNSPAPT*PSGCPP
Trigger: TGGTGGACAACCTGAGGGGCAAGTCGGGGCAGGGCT...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAACCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTGGAGGTCCCGGTATGTaGTGGACCACCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSGGPGM*WTTQNR
Trigger: TCTGTTCTGGGTGGTCCAGCACATACCGGGACCTCC...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680681.1
CDS-3UTR GCA 90 bp CATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACGTCCTGAACTCATCGTaGACCCAAACCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HQQSHHAAGAGSGGSATDVLNSS*TQTLSP
Trigger: AGGGCTGAGGGTTTGGGTGCACGATGAGTTCAGGAC...GTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR CCA 90 bp AATGATCACCTCATAATACCACTCCCGCCGGATGGGTGTATACCAGAGACTGCCAGCCGGATGCCGTGCTaGGTGCCGTGGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NDHLIIPLPPDGCIPETASRMPC*VPWAGS
Trigger: GCTGCCTGCCCACGGCACCCAGCACGGCATCCGGCT...GGCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGTATTATGAGGTGATCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp ACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKGPSTAAVLNSSCTWQAKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...CGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR TCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTTGTTGGCACGCACAGTaGCGTTGGGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPACWHAQ*RWGHGG
Trigger: TCCCCCATGGCCCCAACGTCACTGTGCGTGCCAACA...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CAGCACACCAGCTGCTCTCCTAGCCAGAAACCATCAGGGAACTTCTCCGTGGAGGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QHTSCSPSQKPSGNFSVEAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...CTCCACGGAGAAGTTCCCTGATGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCAGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGTTGTGGGCAGCTGGCTaGGGCCAGGAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQLWAAG*GQEHQR
Trigger: CCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCACAA...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACCACCATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHHHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGGTG...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp CTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGCCATCTCCACAAAGCTaGCCCTCCGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSAHGPPHFSREMSSAKPSPQS*PSGRAP
Trigger: AGGAGCCCGGCCGGAGGGGCAGCTTTGTGGAGATGG...CTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGTGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAAGGGGTGGTGCCTGCTTGCCAGCACACCAGCTGCTCTCCTAGCCAGAAACCACTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: QGVVPACQHTSCSPSQKPLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCATGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEACSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR GCA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: WSRGISIFCPWASSLQQGAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp ACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TKGPSTAAVLNSSCTWQAASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...CGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: HQQSHHAAGAGSGGSATDANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...GTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAATGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTCTGGCACTCTCACCATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSLALSP*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGGTGAGAGTGCCAG...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTGTTGGCACGCACAGTaGCGTTGGGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNCWHAQ*RWGHGG
Trigger: TCCCCCATGGCCCCAACGTCACTGTGCGTGCCAACA...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCTGTTGGCACGCACAGTaGCGTTGGGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSACWHAQ*RWGHGG
Trigger: TCCCCCATGGCCCCAACGTCACTGTGCGTGCCAACA...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSARRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTTGTGGGCAGCTGGCTaGGGCCAGGAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNLWAAG*GQEHQR
Trigger: CCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCACAA...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACAAAATATGGAGAGACTaGCCCCAAACCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHKIWRD*PQTLSP
Trigger: AGGGCTGAGGGTTTGGGGTCAGTCTCTCCATATTTT...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCTGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGGTATTGCTGCGGAAGGATGGTGATGCGGAAGGACTGGTTGGTAACCTCACCGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: QVLLRKDGDAEGLVGNLTGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...GGTGAGGTTACCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGCAATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGGTCGATACCTCCAATGATCATGCTCCCTCCGACAGAGGCCAGCACTTCAGACGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: WSIPPMIMLPPTEASTSDAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...GTCTGAAGTGCTGGCCTCTGTCGGAGGGAGCATGATCATTGGAGGTATCGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CAGCACACCAGCTGCTCTCCTAGCCAGAAACCATCAGGGAACTTCTCCGTGGAGTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QHTSCSPSQKPSGNFSVESAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...CTCCACGGAGAAGTTCCCTGATGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAATGTTGGCACGCACAGTaGCGTTGGGGCCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKCWHAQ*RWGHGG
Trigger: TCCCCCATGGCCCCAACGTCACTGTGCGTGCCAACA...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAAACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHETCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR TCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRRAHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTTTTGGTGACCTTGGGTaGGCTCCAGACAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAFGDLG*APDRHW
Trigger: CCAGTGCCTGTCTGGAGCTCACCCAAGGTCACCAAA...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCATACCCTCCCCTAAACTaGCAGGGACCCAGGTATACT +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEAYPPLN*QGPRYT
Trigger: AGTATACCTGGGTCCCTGTCAGTTTAGGGGAGGGTA...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGTGCGGCTGCGTTGGCTaGTCAGGCCACCATAATCCA +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQCGCVG*SGHHNP
Trigger: TGGATTATGGTGGCCTGAGCAGCCAACGCAGCCGCA...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp ATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGTTTTCGGGCCCGATCGGGGGCAGCACCCACTaGAAAGTTACTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IVHMASADSKANSFSGPIGGSTH*KVTAAC
Trigger: ACAGGCAGCAGTAACTTTGCAGTGGGTGCTGCCCCC...GATCGGGCCCGAAAACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGCTTACCAGGTCGGTaGCCAGCTCCCCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGECLPGR*PAPLPT
Trigger: AGTGGGAAGGGGAGCTGGGCACCGACCTGGTAAGCA...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp CATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACTTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HQQSHHAAGAGSGGSATDLGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...GTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGTGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSCQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR GCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNCQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AATGATCACCTCATAATACCACTCCCGCCGGATGGGTGTATACCAGAGACTGCCGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NDHLIIPLPPDGCIPETAGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...GGCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGTATTATGAGGTGATCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPASAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGAGCAGGGGAGAGGCTaGGATCCGGAGCCCGCTACA +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSEQGRG*DPEPAT
Trigger: TGTAGCGGGCTCCGGATCCCAGCCTCTCCCCTGCTC...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGCCTGCCCCCAAGTCTaGGTGGTGCTGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSACPQV*VVLVAS
Trigger: AGAAGCCACCAGCACCACCCAGACTTGGGGGCAGGC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp GACACACGCCAAGGTAACCTGCGTGTGATGCCAGTACTTCTGAAACTAAGAAAAGGCCTTCGGGCCCTCTaGGCTCGCACTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: DTRQGNLRVMPVLLKLRKGLRAL*ARTGPR
Trigger: ACGTGGGCCAGTGCGAGCCCAGAGGGCCCGAAGGCC...TTTTCTTAGTTTCAGAAGTACTGGCATCACACGCAGGTTACCTTGGCGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGGAGTCGTCAGGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQGSRQA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCCTGACGACTCCC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAAGGGGTGGTGCCTGCTTGCCAGCACACCAGCTGCTCTCCTAGCCAGAAACCACCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: QGVVPACQHTSCSPSQKPPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPATTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEAANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp CACTGGCCGCAGGTATTGCTGCGGAAGGATGGTGATGCGGAAGGACTGGTTGGTAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: HWPQVLLRKDGDAEGLVGKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...ACCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGCAATACCTGCGGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAATTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHEFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR CCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQSRSHT*KQRVDQ
Trigger: CTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCT...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTGCCCTGGAAAGGGCTaGGAAAAAGCCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSCPGKG*EKASFS
Trigger: GGAAAAACTGGCTTTTTCCCAGCCCTTTCCAGGGCA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGCTCCAGACAGGCACTaGGGTGAGGAGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQAPDRH*GEEMSV
Trigger: CACAGACATCTCCTCACCCCAGTGCCTGTCTGGAGC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTGCTCCAGACAGGCACTaGGGTGAGGAGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAAPDRH*GEEMSV
Trigger: CACAGACATCTCCTCACCCCAGTGCCTGTCTGGAGC...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR TCA 90 bp TGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTCGCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: CRPELIVHMASADSKANSLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...CGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp TCGTCTTGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGCATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSWDVATSSTGRRYCCGRHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...CCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: CHQQSHHAAGAGSGGSATTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...AGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCCTGGAAGCAGCGGGTTaGCCAGGTAGGAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSALEAAG*PGRSRM
Trigger: CATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAG...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTTTGTGGGCAGCTGGCTaGGGCCAGGAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSLWAAG*GQEHQR
Trigger: CCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCACAA...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTGCTATCGAAGGGGTTaGGTTTTATGCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSCYRRG*VLCPGK
Trigger: CTTTCCAGGGCATAAAACTCAACCCCTTCGATAGCA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGAAGGGAACCATTGGTaGGGCTTGCTCTCCTATCTA +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAEGNHW*GLLSYL
Trigger: TAGATAGGAGAGCAAGCCTCACCAATGGTTCCCTTC...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680681.1
CDS-3UTR GCA 90 bp GTCTTGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGATCCACTGCAAAGTTACTaGTGCCTGTATCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VLGRGHIFHWPQVLLRKDPLQSY*CLYPPG
Trigger: TCCTGGTGGATACAGGCAGCAGTAACTTTGCAGTGG...ATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTGCTTACCAGGTCGGTaGCCAGCTCCCCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLCLPGR*PAPLPT
Trigger: AGTGGGAAGGGGAGCTGGGCACCGACCTGGTAAGCA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGCTTACCAGGTCGGTaGCCAGCTCCCCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSCLPGR*PAPLPT
Trigger: AGTGGGAAGGGGAGCTGGGCACCGACCTGGTAAGCA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTTGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGGTCGATACCTCCAATGATCATGCTCCCTCCGACAGAGGCCAGCACTTCAGACCCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WSIPPMIMLPPTEASTSDPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...GTCTGAAGTGCTGGCCTCTGTCGGAGGGAGCATGATCATTGGAGGTATCGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATTATGCCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LAALGFQQRLPIQAVVIMPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...CATAATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLCSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAARAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGATGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: VLGRGHIFHWPQVLLRKDGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...ATCCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGGAGGTCCCGGTATGTaGTGGACCACCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEGGPGM*WTTQNR
Trigger: TCTGTTCTGGGTGGTCCAGCACATACCGGGACCTCC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGGGAGTCGTCAGGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEGSRQA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCCTGACGACTCCC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTGGGAGTCGTCAGGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPGSRQA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCCTGACGACTCCC...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCAGATGGCAGCCATGACATATGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: HHEAEWQHEEGADGSHDIWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...TATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AAAGCTGCAGGGAGAAGAGGTTGGGAACGTGGGTCTGCTTTACCAGAGAGTCAAGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KAAGRRGWERGSALPESQGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...TTGACTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTTCTCCCTGCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGGCCACATCTTCCACTaGCCGCAGGTATTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLGHIFH*PQVLLR
Trigger: CCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRANSSCT*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCACAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAACAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCGGTCCCGGTATGTGCTaGACCACCCAGAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAGPGMC*TTQNRV
Trigger: CACTCTGTTCTGGGTGGTCCAGCACATACCGGGACC...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp CTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGCCAAACCCTCAGCCCTaGCACTCTCACCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSAHGPPHFSREMSSAKPNPQP*HSHHGK
Trigger: CTTGCCATGGTGAGAGTGCCAGGGCTGAGGGTTTGG...CTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TCCACCGCTGCCGTCCTGAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATTTCAGCCTCACCATGTaGCAGCTGACAGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: STAAVLNSSCTGERANVNFSLTM*QLTGSL
Trigger: TAGTGACCCTGTCAGCTGCCACATGGTGAGGCTGAA...ATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CAA 72 bp CCTCTCCTACTGACTTTGGCCAGCAGGGAAACAAGCTaGGTCTCTTCTCTGCCAGGGTACCACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: PLLLTLASRETS*VSSLPGYHRDT
Trigger: TGTGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGCTTGTTTCCCTGCTGGCCAAAGTCAGTAGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
3UTR CAA 72 bp CCCTGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTaGGAGAGTTGTGCATGGGAGCGAGCGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PWKAHSCRRISV*ESCAWERAPQC
Trigger: ACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHDEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQAHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSALPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TCGTCTTGGGACGTGGCCACATCTTCCACTGGCCGCAGGTATTGCTGCGGAAGGTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSWDVATSSTGRRYCCGRYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...CCTTCCGCAGCAATACCTGCGGCCAGTGGAAGATGTGGCCACGTCCCAAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCAGGGTGGGGAGGGTCCTaGGGTGCTCTGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAGWGGS*GALATG
Trigger: ACCTGTGGCCAGAGCACCTCAGGACCCTCCCCACCC...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGACACACATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 4 (lower is better)
Translates to: SKVIMLLAQAAEAAPLTHMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...GTGTGTCAGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGTGGCATCTTGTAGGGTaGTTGGAGTGGCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQWHLVG*LEWPEY
Trigger: GTACTCAGGCCACTCCAATCACCCTACAAGATGCCA...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTTTGGTGACCTTGGGTaGGCTCCAGACAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSFGDLG*APDRHW
Trigger: CCAGTGCCTGTCTGGAGCTCACCCAAGGTCACCAAA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGATCAGTAGTTCTGAGTTaGCCAAAAGCCACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: WSRGISIFCPWASSLQQGSVVLS*PKATPL
Trigger: CAAGGGGGTGGCTTTTGGTCAACTCAGAACTACTGA...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGGCAGCCGGATGCCGTaGTGGGTGCCGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFGSRMP*WVPWAG
Trigger: GCCTGCCCACGGCACCCAGCACGGCATCCGGCTGCC...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATCCATCTCCACAAAGCTaGCCCTCCGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHPSPQS*PSGRAP
Trigger: AGGAGCCCGGCCGGAGGGGCAGCTTTGTGGAGATGG...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCACTGCAAAGTTACTGCTaGCTGTATCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRALQSYC*LYPPGC
Trigger: ACATCCTGGTGGATACAGGCAGCAGTAACTTTGCAG...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGGGGGCAGCACCCACTaGAAAGTTACTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLGGSTH*KVTAAC
Trigger: ACAGGCAGCAGTAACTTTGCAGTGGGTGCTGCCCCC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTTGCTTACCAGGTCGGTaGCCAGCTCCCCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SCAWERAPQCYSFLFRISCLPGR*PAPLPT
Trigger: AGTGGGAAGGGGAGCTGGGCACCGACCTGGTAAGCA...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLCQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTTGGGAACGTGGGTCTGCTTTACCAGAGAGTCAAAGAAAGGCTCCAGGGAGTCTGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VGNVGLLYQRVKERLQGVCQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...GACTCCCTGGAGCCTTTCTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAACSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSCSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AACTCTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: NSCCSGFPTEVTNPGSGHAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...ATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAASAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTCTTCTGAGATGGGATaGTATCTTGGAGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSSSEMG*YLGDEV
Trigger: GACCTCATCTCCAAGATAGCATCCCATCTCAGAAGA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCTCTTCTGAGATGGGATaGTATCTTGGAGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRSSEMG*YLGDEV
Trigger: GACCTCATCTCCAAGATAGCATCCCATCTCAGAAGA...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR GCA 90 bp TGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTACCATTGGTGAGGCTTaGTCTCCTATCTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: CHQQSHHAAGAGSGGSATTIGEA*SPIYCS
Trigger: TGAGCAATAGATAGGAGAGCAAGCCTCACCAATGGT...AGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGGAGGTCCCGGTATGTaGTGGACCACCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYGGPGM*WTTQNR
Trigger: TCTGTTCTGGGTGGTCCAGCACATACCGGGACCTCC...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGGAGGTCCCGGTATGTaGTGGACCACCCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLGGPGM*WTTQNR
Trigger: TCTGTTCTGGGTGGTCCAGCACATACCGGGACCTCC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGACCAGGTAACTCTTGCTaGTCTGGGTTTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: WSRGISIFCPWASSLQQGPGNSC*SGFPTE
Trigger: CTCTGTTGGAAACCCAGAGCAGCAAGAGTTACCTGG...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCATACCCAGGTAACTCTTaGTGCTCTGGGTTTCCAACA +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEAYPGNS*CSGFPT
Trigger: TGTTGGAAACCCAGAGCAGCAAGAGTTACCTGGGTA...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp ACCGCTGCCGTCCTGAACTCATCGTGCACTGGGGAGAGGGCAAATGTGAATGGATCAGTCTGCTACCCTTaGATCAAGAGCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TAAVLNSSCTGERANVNGSVCYP*IKSFPR
Trigger: CCTTGGGAAGCTCTTGATGCAAGGGTAGCAGACTGA...TCCATTCACATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGACGGCAGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACACTGTCCAACCAGATaGCTTGCTTACCGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPHCPTR*LAYRKP
Trigger: AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTG...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGCCCGGGTCCGGGCTGTaGAGAGCGGTCAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKPGSGL*RAVRGD
Trigger: ATCTCCCCTGACCGCTCTCCACAGCCCGGACCCGGG...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAGGGAGTCGTCAGGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAGSRQA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCCTGACGACTCCC...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCATGCCCTGGAAAGGGCTaGGAAAAAGCCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPCPGKG*EKASFS
Trigger: GGAAAAACTGGCTTTTTCCCAGCCCTTTCCAGGGCA...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCTTGAGTTTTATGCCCTaGAAAGGGCTGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRLSFMP*KGLGKS
Trigger: GCTTTTTCCCAGCCCTTTCCAGGGCATAAAACTCAA...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR CCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTTTGGAGAGTTGTGCATaGGAGCGAGCGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPLESCA*ERAPQC
Trigger: ACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAA...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGGTCCCGGTATGTGCTaGACCACCCAGAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSGPGMC*TTQNRV
Trigger: CACTCTGTTCTGGGTGGTCCAGCACATACCGGGACC...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTGGTCCCGGTATGTGCTaGACCACCCAGAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSGPGMC*TTQNRV
Trigger: CACTCTGTTCTGGGTGGTCCAGCACATACCGGGACC...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAACCAAACCCTCAGCCCTaGCACTCTCACCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKPNPQP*HSHHGK
Trigger: CTTGCCATGGTGAGAGTGCCAGGGCTGAGGGTTTGG...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp TGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCCACTGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: CHQQSHHAAGAGSGGSATDEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...AGTGGCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR TCA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGATCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: WSRGISIFCPWASSLQQGSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESAHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000528053.5
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAACTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GACACACGCCAAGGTAACCTGCGTGTGATGCCAGTACTTCTGAAACTAAGAAAACGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DTRQGNLRVMPVLLKLRKRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...TTTTCTTAGTTTCAGAAGTACTGGCATCACACGCAGGTTACCTTGGCGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACGAGCATTGACACTAGCTTTTGCACAACTGTTGACTTGGGTTTGAGGCAACTGCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: TSIDTSFCTTVDLGLRQLRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...CAGTTGCCTCAAACCCAAGTCAACAGTTGTGCAAAAGCTAGTGTCAATGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp GTCCATTTTCAGATCCTGTCCATTGATCTCCACCCGCACAATGATCACCTCATACGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VHFQILSIDLHPHNDHLIRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...TATGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTCGGAGGCAGCGCCACTaGCACACCATGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSRRQRH*HTMRQS
Trigger: ACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCG...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRATKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTGTGATTGGAGTGGCCTaGGTACTCAGCTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPVIGVA*VLSSSE
Trigger: CTCTGAAGAGCTGAGTACTCAGGCCACTCCAATCAC...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGTGATTGGAGTGGCCTaGGTACTCAGCTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNVIGVA*VLSSSE
Trigger: CTCTGAAGAGCTGAGTACTCAGGCCACTCCAATCAC...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTTGGCATCTTGTAGGGTaGTTGGAGTGGCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPWHLVG*LEWPEY
Trigger: GTACTCAGGCCACTCCAATCACCCTACAAGATGCCA...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTAGACAGGCACTGGGGTaGGGAGATGTCTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPRQALG*GDVCAK
Trigger: TTTTGCACAGACATCTCCTCACCCCAGTGCCTGTCT...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTGACAGGCCAACATTGTaGAGTCCTCACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESDRPTL*SPHPFP
Trigger: TGGGAAAGGGTGAGGACTTCACAATGTTGGCCTGTC...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCACCCTGCCACCTTTCTaGAGTAGCATTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLTLPPF*SSIQPH
Trigger: GTGAGGCTGAATGCTACTTCAGAAAGGTGGCAGGGT...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCAGGGAGAGGGCAAATGTaGATGGACAGCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSGRGQM*MDSSHC
Trigger: ACAATGAGAGCTGTCCATTCACATTTGCCCTCTCCC...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp GTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCTTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VFHVQGDKRAFHRCRPELLGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...GAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTACCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GCTGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGCAAAGCCAATTGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: AAVLNSSCTWQALTAKPIVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...AATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp GAGACTGCCTGTGTACAGCGAGTGGTCGATACCTCCAATGATCATGCTCCCTCCAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: ETACVQRVVDTSNDHAPSNEGWW*HCPQCS
Trigger: AGAGCATTGTGGACAGTGGCACCACCAACCTTCGTT...GGAGGGAGCATGATCATTGGAGGTATCGACCACTCGCTGTACACAGGCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAACQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLCQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCCATTTTCAGATCCTGTCCATTGATCTCCACCCGCACAATGATCACCTCATACCAAGGGGTGGTGCCTaGTTGCCAGCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHFQILSIDLHPHNDHLIPRGGA*LPAHQL
Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACCACCCCTTGG...TATGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTTGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: SCAWERAPQCYSFLFRISCSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTTGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSCSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCRAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLSAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTGTTTTGGAGAGTTGTaGATGGGAGCGAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLCFGEL*MGASAS
Trigger: TGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTGTTTTGGAGAGTTGTaGATGGGAGCGAGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNCFGEL*MGASAS
Trigger: TGAGGCGCTCGCTCCCATGCACAACTCTCCAAAACA...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTAGGAGGGGGCTTAACTaGTTCCCAGTAAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPRRGLN*FPVKTL
Trigger: CAGGGTCTTTACTGGGAAGCAGTTAAGCCCCCTCCT...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGGCCAAGTCTTCCTTTaGTGCCACTGTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNGQVFL*CHCLGF
Trigger: GAAGCCAAGACAGTGGCAGCAAAGGAAGACTTGGCC...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAAACCACCTAGGAACCTaGTGTTGCTCTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPNHLGT*CCSKAI
Trigger: AATGGCCTTAGAGCAACAGCAGGTTCCTAGGTGGTT...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR GCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGGAGGTCCCGGTATGTaGTGGACCTTATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNGGPGM*WTLSHL
Trigger: GAGATGAGATAAGGTCCAGCACATACCGGGACCTCC...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCCCGTGCTGGGTGCCGTaGGCAGGCAGCACTCCCGCG +
Preference number: 4 (lower is better)
Translates to: CISHTLGIMLVPLCDALVPCWVP*AGSTPA
Trigger: CGCGGGAGTGCTGCCTGCCCACGGCACCCAGCACGG...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SEPMTRKTEPSPAIVQLLKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...GAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATTATGAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LAALGFQQRLPIQAVVIMSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...CATAATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGGGCAGCTGGCTGAGGCCAGGAACACCAGAGGCCCTCCTTGTATTTCCCTCTTGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: VGSWLRPGTPEALLVFPSWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...AGAGGGAAATACAAGGAGGGCCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTGGCAGAGGCATTTGGTaGGTGGGGAGGGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSGRGIW*VGRVLR
Trigger: CCTCAGGACCCTCCCCACCCACCAAATGCCTCTGCC...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAAGGAGCTGGACTTCCTaGGACCTCCTTGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKRSWTS*DLLGIL
Trigger: CAAGATGCCAAGGAGGTCCCAGGAAGTCCAGCTCCT...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGGTCCCGGTATGTGCTaGACCACCCAGAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLGPGMC*TTQNRV
Trigger: CACTCTGTTCTGGGTGGTCCAGCACATACCGGGACC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTACTGGCACTCTCACCATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLLALSP*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGGTGAGAGTGCCAG...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR CCA 90 bp TGGTCCAGGGGAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGATACCAATCCAGGCAGTaGTCATTATGGCAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: WSRGISIFCPWASSLQQGYQSRQ*SLWQAV
Trigger: TACTGCCTGCCATAATGACCACTGCCTGGATTGGTA...TCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCCCCTGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
3UTR CAA 72 bp CAGAAGGTTAAGGCAGTTGGTTCACAACCAAGTTGTTaGGTGACCTTGGGTGAGCTCCAGACAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QKVKAVGSQPSC*VTLGELQTGTG
Trigger: CCCAGTGCCTGTCTGGAGCTCACCCAAGGTCACCAAACAACTTGGTTGTGAACCAACTGCCTTAACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGTCGATACCTCCAATGATCATGCTCCCTCCGACAGAGGCCAGCACTTCAGACTCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: WSIPPMIMLPPTEASTSDSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...GTCTGAAGTGCTGGCCTCTGTCGGAGGGAGCATGATCATTGGAGGTATCGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLAHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000528053.5
ENST00000680971.1
CDS-3UTR TCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR TCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCAGGCAGAGTGGCAGCATaGAGAGGGCGCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAGRVAA*RGRRWQ
Trigger: CTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCC...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSCILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGACATAAGGAAGCCCTaGGGCTGCCATCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLDIRKP*GCHPFS
Trigger: GGAGAAAGGATGGCAGCCTCAGGGCTTCCTTATGTC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CACCATGAGGCAGAGTGGCAGCATGAAGAGGGCGCAGATGGCAGCCATGACATAGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HHEAEWQHEEGADGSHDIDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...TATGTCATGGCTGCCATCTGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGTGCTATCGAAGGGGTTaGGTTTTATGCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQCYRRG*VLCPGK
Trigger: CTTTCCAGGGCATAAAACTCAACCCCTTCGATAGCA...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTAGACAGGCACTGGGGTaGGGAGATGTCTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSRQALG*GDVCAK
Trigger: TTTTGCACAGACATCTCCTCACCCCAGTGCCTGTCT...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCACACCATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAHHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGGTG...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCATTAACTTTCTGCTGCTaGAATCCAACTGCAAAACCC +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEALTFCC*NPTAKP
Trigger: GGGTTTTGCAGTTGGATTTCAGCAGCAGAAAGTTAA...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGGATGCCGTGCTGGGTaGCGTGGGCAGGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFGCRAG*RGQAAL
Trigger: GAGTGCTGCCTGCCCACGGCACCCAGCACGGCATCC...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSSAHGPPHFSREMSSAKVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...CTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSANEGWW*HCPQCS
Trigger: AGAGCATTGTGGACAGTGGCACCACCAACCTTCGTT...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESNEGWW*HCPQCS
Trigger: AGAGCATTGTGGACAGTGGCACCACCAACCTTCGTT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGGCAGCGGAGGCAGCGCCACTGACACACCATGAGGCAGAGTGGCAGCATGAACTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: QAAEAAPLTHHEAEWQHELDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...TTCATGCTGCCACTCTGCCTCATGGTGTGTCAGTGGCGCTGCCTCCGCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WKAHSCRRISVLESCAWEDRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLDRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAAGGAGGGGGCTTAACTaGTTCCCAGTAAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAARRGLN*FPVKTL
Trigger: CAGGGTCTTTACTGGGAAGCAGTTAAGCCCCCTCCT...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGACTATAGACTCAGTCTaGTACCCTTGCATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSTIDSV*YPCIKS
Trigger: GCTCTTGATGCAAGGGTAGCAGACTGAGTCTATAGT...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACCAACTGCAAAACCCTaGCACCTTTCTGAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSPTAKP*HLSEVA
Trigger: TGCTACTTCAGAAAGGTGGCAGGGTTTTGCAGTTGG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGGCCCCCAAGTCTGGGTaGTGCTGGTGGCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKAPKSG*CWWLLR
Trigger: CCTGAGAAGCCACCAGCACCACCCAGACTTGGGGGC...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp GACACACGCCAAGGTAACCTGCGTGTGATGCCAGTACTTCTGAAACTAAGAAAAGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: DTRQGNLRVMPVLLKLRKVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...TTTTCTTAGTTTCAGAAGTACTGGCATCACACGCAGGTTACCTTGGCGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAAAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGCAGCAGCCCTTCCTTGTATACCCAGCTGGTAGGAGTGATAACTAAAAGTCAGGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSSPSLYTQLVGVITKSQASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...CTGACTTTTAGTTATCACTCCTACCAGCTGGGTATACAAGGAAGGGCTGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp CTCCTTGCAGTCCATTTTCAGATCCTGTCCATTGATCTCCACCCGCACAATGATACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: LLAVHFQILSIDLHPHNDTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...ATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGACTGCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCATCGCTTCAAACACTTTCTTaGGCAAACGAAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SMSKVTKGPSTAAVLNSSLQTLS*ANEGWW
Trigger: CCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAG...CGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSANSSCT*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000528053.5
ENST00000680971.1
CDS-3UTR CCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNNSSCT*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000528053.5
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCCAAGGCAGAGGCATTTaGTGGGTGGGGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFQGRGI*WVGRVL
Trigger: CAGGACCCTCCCCACCCACCAAATGCCTCTGCCTTG...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATTATGTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAALGFQQRLPIQAVVIMYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...CATAATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp AGCAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGGAGGGCAAATGTGAATaGACAGCTCTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: SREMSSAKSSCCWRRQRREGKCE*TALIVI
Trigger: TATGACAATGAGAGCTGTCCATTCACATTTGCCCTC...CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGGTCCCGGTATGTGCTaGACCTTATCTCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYGPGMC*TLSHLR
Trigger: CCTGAGATGAGATAAGGTCCAGCACATACCGGGACC...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSATCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGTT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLAHGKR*QQSQFV
Trigger: AACGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000528053.5
ENST00000680971.1
CDS-3UTR TCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCCCATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: CDQSEPRRCGPGESLSSAHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...GGCAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPATKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGCTGGAAGCAGCGGGTTaGCCAGGTAGGAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRELEAAG*PGRSRM
Trigger: CATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAG...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCTTGTGGGCAGCTGGCTaGGGCCAGGAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVLWAAG*GQEHQR
Trigger: CCTCTGGTGTTCCTGGCCTCAGCCAGCTGCCCACAA...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAACCAAGTTGTTTGGTaGCCTTGGGTGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSNQVVW*PWVSSR
Trigger: TCTGGAGCTCACCCAAGGTCACCAAACAACTTGGTT...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGAAGGGAACCATTGGTaGGGCTTGCTCTCCTATCTA +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSEGNHW*GLLSYL
Trigger: TAGATAGGAGAGCAAGCCTCACCAATGGTTCCCTTC...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCATGGGGCCATGGGGGATaGTTACCAGGTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAWGHGG*LPGRCP
Trigger: TGGGCACCGACCTGGTAAGCATCCCCCATGGCCCCA...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGAGGCCAGCCCCAGGATaGCTTCCCAGTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRRPAPG*LPSWSR
Trigger: ACGGCTCCAACTGGGAAGGCATCCTGGGGCTGGCCT...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLLGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: QSSMSKVTKGPSTAAVLNCHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...GTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLNEGWW*HCPQCS
Trigger: AGAGCATTGTGGACAGTGGCACCACCAACCTTCGTT...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGAGGGCCTTCCACCGCTaGCGTCCTGAACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLARAFHR*RPELIV
Trigger: CACGATGAGTTCAGGACGGCAGCGGTGGAAGGCCCT...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCAGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGGCAAAGTCATCATGCTaGTGGCGCAGGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKAKSSC*WRRQRR
Trigger: CCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGC...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGCAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQQVGVG*SGYTRK
Trigger: TTTCCTAGTATACCCACTGCATCCTACTCCTACCTG...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGATTTGGGGGAAAGAGTGAGCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTTTCTCTTGCCTCACTTaGCCAGGTTTATTGACTAGC +
Preference number: 4 (lower is better)
Translates to: RFGGKSEPMTRKTEPSPAFSCLT*PGLLTS
Trigger: GCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAA...AGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAATTGACACTAGCTTTTaGACAACTGTTGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEAIDTSF*TTVDLG
Trigger: ACCCAAGTCAACAGTTGTGCAAAAGCTAGTGTCAAT...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTGCTGAAATCCAACTaGAAAACCCTGCCACCTTTC +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESLLKSN*KTLPPF
Trigger: GAAAGGTGGCAGGGTTTTGCAGTTGGATTTCAGCAG...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCCAACCAGATGCCTTaGTTACCGAAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSSNQMP*LPKASR
Trigger: TCTGGAGGCTTTCGGTAAGCAAGGCATCTGGTTGGA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTGCTCTAAGGCCATTCTaGTTTGGTTTGGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSALRPF*FGLAQP
Trigger: AGGCTGAGCCAAACCAAAGCAGAATGGCCTTAGAGC...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGGGAATCCTAGAGTCTaGTTTCAGGCTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLGNPRV*FQAAQQ
Trigger: TTGCTGAGCAGCCTGAAAGCAGACTCTAGGATTCCC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCACCACTCCCGCCGGATaGGTGTATACCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFTTPAG*VYTRDC
Trigger: GCAGTCTCTGGTATACACCCATCCGGCGGGAGTGGT...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGTGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: WKAHSCRRISVLESCAWEWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR CCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQNSSCT*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGCACCATGAGGCAGAGTaGCAGCATGAAGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREHHEAE*QHEEGA
Trigger: TGCGCCCTCTTCATGCTGCCACTCTGCCTCATGGTG...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCAGCGCAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: EMSSAKSSCCWRRQRRQRNSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...GCGCTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR CCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTGCCCTGGAAAGGGCTaGGAAAAAGCCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSCPGKG*EKASFS
Trigger: GGAAAAACTGGCTTTTTCCCAGCCCTTTCCAGGGCA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGAAGCAACACAAGTGTTaGCGACCCCTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLKQHKC*RPLFSL
Trigger: AAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTT...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCTTGGAGAGTTGTGCATaGGAGCGAGCGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCLESCA*ERAPQC
Trigger: ACACTGAGGCGCTCGCTCCCATGCACAACTCTCCAA...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCCCACAGGTTTTTCCTaGGCCAAGTCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSPTGFS*AKSSFA
Trigger: AGCAAAGGAAGACTTGGCCCAGGAAAAACCTGTGGG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCAGCACCACAAAGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLQHHKA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCTTTGTGGTGCTG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510630.5
3UTR CAA 72 bp TTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTaGGCGACCCCTGTTCTCCCTTCTCCCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: FLFRISQKATQV*ATPVLPSPSVH
Trigger: GTGGACAGAGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp CTCCCTTCCCAAGTCACTGGGAGCAGCAGCCCTTCCTaGTATACCCAGCTGGTAGGAGTGATAACTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LPSQVTGSSSPS*YTQLVGVITKS
Trigger: ACTTTTAGTTATCACTCCTACCAGCTGGGTATACAAGGAAGGGCTGCTGCTCCCAGTGACTTGGGAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSTCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAATCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGCATCAAGAGCTTCCCAAGGTACCCAGGTAACTCTTGCTGCTCTGGGTTTCCACATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: CIKSFPRYPGNSCCSGFPHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...TGGAAACCCAGAGCAGCAAGAGTTACCTGGGTACCTTGGGAAGCTCTTGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGAAAGCCCACTCTTGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATGGGAGATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WKAHSCRRISVLESCAWEIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...CTCCCATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp ACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGGCAGCATCAGCTGTTGAATaGATGTTCAACATTATGCTT +
Preference number: 4 (lower is better)
Translates to: TRKTEPSPAIVQLLSHRAASAVE*MFNIML
Trigger: AAGCATAATGTTGAACATTCATTCAACAGCTGATGC...TGCCCTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAAT +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPASATV*CFSQIN
Trigger: ATTTATTTGACTAAAGCATCACACAGTGGCACTAGC...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGACATAAGGAAGCCCTaGGGCTGCCATCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFDIRKP*GCHPFS
Trigger: GGAGAAAGGATGGCAGCCTCAGGGCTTCCTTATGTC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGCTATCGAAGGGGTTaGGTTTTATGCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLCYRRG*VLCPGK
Trigger: CTTTCCAGGGCATAAAACTCAACCCCTTCGATAGCA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTCTTCTAATCAAGCTCTaGCAGGCCAACATTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPLLIKL*QANIVK
Trigger: CTTCACAATGTTGGCCTGTCAGAGCTTGATTAGAAG...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGAAGGGAACCATTGGTaGGGCTTGCTCTCCTATCTA +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLEGNHW*GLLSYL
Trigger: TAGATAGGAGAGCAAGCCTCACCAATGGTTCCCTTC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGAGCCCTGCCCCGACTTaGCCCTCAGGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVSPAPT*PSGCPP
Trigger: TGGTGGACAACCTGAGGGGCAAGTCGGGGCAGGGCT...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCTGCAAAGTTACTGCTaGCTGTATCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQLQSYC*LYPPGC
Trigger: ACATCCTGGTGGATACAGGCAGCAGTAACTTTGCAG...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCATTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSLGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp CAGGGAGATGTCATCAGCAAAGTCATCATGCTGCTGGCGCAGGCAGCGGAGGCACTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: QGDVISKVIMLLAQAAEALDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...TGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGATGACATCTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp ACGAGCATTGACACTAGCTTTTGCACAACTGTTGACTTGGGTTTGAGGCAACTGCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: TSIDTSFCTTVDLGLRQLLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...CAGTTGCCTCAAACCCAAGTCAACAGTTGTGCAAAAGCTAGTGTCAATGCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGTGCCAGCACACCAGCTaGTCTCCTAGCCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRECQHTS*SPSQKP
Trigger: TGGTTTCTGGCTAGGAGAGCAGCTGGTGTGCTGGCA...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTGGGGTGGTGCCTGCTTaGCAGCACACCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPGVVPA*QHTSCS
Trigger: AGAGCAGCTGGTGTGCTGGCAAGCAGGCACCACCCC...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp AACTCTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: NSCCSGFPTEVTNPGSGHGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...ATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGGGAGGGTCCTGAGGTaGTCTGGCCACAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFGRVLR*SGHRCH
Trigger: ATGGCACCTGTGGCCAGAGCACCTCAGGACCCTCCC...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCATCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTCTGAGATGGGATaGTATCTTGGAGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGESSEMG*YLGDEV
Trigger: GACCTCATCTCCAAGATAGCATCCCATCTCAGAAGA...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTCTTCTGAGATGGGATaGTATCTTGGAGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESSSEMG*YLGDEV
Trigger: GACCTCATCTCCAAGATAGCATCCCATCTCAGAAGA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATGGAAAGCCCACTCTTaGAGGAGGATAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SVSPTCDQSEPRRCGPGEWKAHS*RRISVL
Trigger: CAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA...TTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTACTTCTCCGTCTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESTSPSP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGACGGAGAAGT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCGTGACGTTGGGGCCATaGGGGATGCTTACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVVTLGP*GMLTRS
Trigger: CGACCTGGTAAGCATCCCCCATGGCCCCAACGTCAC...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCAGGGAGTCGTCAGGCCTaGCAATCTCAGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAGSRQA*QSQHRP
Trigger: TGGCCTATGCTGAGATTGCCAGGCCTGACGACTCCC...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTCAAACACTTTCTTaGGCAAACGAAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNLQTLS*ANEGWW
Trigger: CCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAG...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GAGACTGCCTGTGTACAGCGAGTGGTCGATACCTCCAATGATCATGCTCCCTCCTGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: ETACVQRVVDTSNDHAPSWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...GGAGGGAGCATGATCATTGGAGGTATCGACCACTCGCTGTACACAGGCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGAAGTCATCATGCTGCTaGCGCAGGCAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRKSSCC*RRQRRQ
Trigger: CTGCCTCCGCTGCCTGCGCCAGCAGCATGATGACTT...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATTACAGGTACAGTCCCTaGAACCCACCTTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHYRYSP*NPPCQP
Trigger: AGGCTGGCAAGGTGGGTTCCAGGGACTGTACCTGTA...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGAGCAGGTCCCATACCTaGAAGCAGCGGGTTGACCAG +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLASRSHT*KQRVDQ
Trigger: CTGGTCAACCCGCTGCTTCCAGGTATGGGACCTGCT...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTTGAGTTTTATGCCCTaGAAAGGGCTGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLLSFMP*KGLGKS
Trigger: GCTTTTTCCCAGCCCTTTCCAGGGCATAAAACTCAA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAACATATTTCCTGTCCTaGGAAAAATGGAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPTYFLS*EKWRPK
Trigger: CTTTGGTCTCCATTTTTCCCAGGACAGGAAATATGT...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTCCCACAGGTTTTTCCTaGGCCAAGTCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SCAWERAPQCYSFLFRISPTGFS*AKSSFA
Trigger: AGCAAAGGAAGACTTGGCCCAGGAAAAACCTGTGGG...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTGCAGATTTAAAGCCTaGTGCTCACCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLCRFKA*CSPTVQ
Trigger: TTGGACAGTGGGTGAGCACCAGGCTTTAAATCTGCA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTATCTTGCAATTCCTTTaGGGGATGCAGATTGTAGGG +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESILQFL*GMQIVG
Trigger: CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGAT...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESDEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGCTGCGGAAGGATGGTaGTGCGGAAGGACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVAAEGW*CGRTGW
Trigger: CCAACCAGTCCTTCCGCATCACCATCCTTCCGCAGC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TGGAAGCAGCGGGTTGACCAGGTAGGAGTAGGATGCAGTGGGTATACTAGGAAAACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WKQRVDQVGVGCSGYTRKTKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...TTTCCTAGTATACCCACTGCATCCTACTCCTACCTGGTCAACCCGCTGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSCILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGGACATAAGGAAGCCCTaGGGCTGCCATCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKDIRKP*GCHPFS
Trigger: GGAGAAAGGATGGCAGCCTCAGGGCTTCCTTATGTC...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCCTGGAAGCAGCGGGTTaGCCAGGTAGGAGTAGGATG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVLEAAG*PGRSRM
Trigger: CATCCTACTCCTACCTGGTCAACCCGCTGCTTCCAG...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGCTGCTCTGGGTTTCCAACAGAGGTTACCAATCCAGGCAGTGGTCATTATGCTGTTGACTTGGGTTTaGGGCAACTGTTACTACCCT +
Preference number: 4 (lower is better)
Translates to: LAALGFQQRLPIQAVVIMLLTWV*GNCYYP
Trigger: AGGGTAGTAACAGTTGCCTCAAACCCAAGTCAACAG...CATAATGACCACTGCCTGGATTGGTAACCTCTGTTGGAAACCCAGAGCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGCCCAAGTCTGGGTGGTaGTGGTGGCTTCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRPKSGW*WWLLRR
Trigger: TCTCCTGAGAAGCCACCAGCACCACCCAGACTTGGG...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp TCTTCCATGTCCAAGGTGACAAAAGGGCCTTCCACCGCTGCCGTCCTGAACTCACATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SSMSKVTKGPSTAAVLNSHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...TGAGTTCAGGACGGCAGCGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000514464.2
CDS-3UTR GCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESCHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCAACGAAGGTTGGTGGTaGCACTGTCCACAATGCTCT +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCNEGWW*HCPQCS
Trigger: AGAGCATTGTGGACAGTGGCACCACCAACCTTCGTT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTCCGTGGAGGAGGCTaGCTTGATGGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSLRGGG*LDGFDC
Trigger: GCAGTCAAATCCATCAAGGCAGCCTCCTCCACGGAG...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGGCCGCAGGTATTGCTaGGGAAGGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFGRRYC*GRMVMR
Trigger: CCGCATCACCATCCTTCCGCAGCAATACCTGCGGCC...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVSAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLADRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTCAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGGAAAGCCCACTCTTaGAGGAGGATAAGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSWKAHS*RRISVL
Trigger: CAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATTCTCTTGCCTCACTTaGCCAGGTTTATTGACTAGC +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLFSCLT*PGLLTS
Trigger: GCTAGTCAATAAACCTGGGCAAGTGAGGCAAGAGAA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTACTTCCTCATTTCTCTTaGCTCACTTGCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLLPHFS*LTCPGL
Trigger: TAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAG...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp TATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGTACCATTGGTGAGGCTTaGTCTCCTATCTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: YLLPMGLLTSAGRCHQQSTIGEA*SPIYCS
Trigger: TGAGCAATAGATAGGAGAGCAAGCCTCACCAATGGT...ACTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510915.6
ENST00000680681.1
CDS-3UTR GCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGTCCTGAACTCATCGTaGACTGGGGAGAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFVLNSS*TGERAN
Trigger: ATTTGCCCTCTCCCCAGTGCACGATGAGTTCAGGAC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTCTAGGAACCTGCTGTTaGTCTAAGGCCATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSLGTCC*SKAILL
Trigger: AAGCAGAATGGCCTTAGAGCAACAGCAGGTTCCTAG...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCAGCCAGCACTTCAGACTaGTTGAGGGGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAASTSD*LRGKPA
Trigger: TGCTGGCTTCCCCCTCAACCAGTCTGAAGTGCTGGC...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTCCATTTTCAGATCCTGTCCATTGATCTCCACCCGCACAATGATCACCTCATATGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: VHFQILSIDLHPHNDHLIWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...TATGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATCTGAAAATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCTGGGCAAACGAAGGTTaGTGGTGCCACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFWANEG*WCHCPQ
Trigger: TTGTGGACAGTGGCACCACCAACCTTCGTTTGCCCA...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCTTCAAACACTTTCTTaGGCAAACGAAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSLQTLS*ANEGWW
Trigger: CCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGGTCCTGAGGTGCTCTaGCCACAGGTGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVGPEVL*PQVPSV
Trigger: CACAGATGGCACCTGTGGCCAGAGCACCTCAGGACC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATTGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYCFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLCFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GCCTATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCAGTATTCTTGTTTTATTaGTTTATGGCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AYDQEDRAQPCYSPVALPVFLFY*FMACGQ
Trigger: CTGCCCACAAGCCATAAACCAATAAAACAAGAATAC...TGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTGCAGTGAGTGGAGAATaGGACAGTCATTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSAVSGE*DSHFSG
Trigger: TCCTGAAAAATGACTGTCCCATTCTCCACTCACTGC...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCCCAAATGCAGTGAGTaGAGAATGGGACAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSPKCSE*RMGQSF
Trigger: AAATGACTGTCCCATTCTCCACTCACTGCATTTGGG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCAGACATGCAGACCAATaGGAAAGGCCCCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCRHADQ*ERPQMQ
Trigger: CTGCATTTGGGGCCTTTCCCATTGGTCTGCATGTCT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGAAGCAACACAAGTGTTaGCGACCCCTGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWKQHKC*RPLFSL
Trigger: AAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTT...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp TGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTaGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: CAWERAPQCYSF*FRISQKATQVL
Trigger: CAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp AACTGCTTCCCAGTAAAGACCCTGGAAAGCCCACTCTaGCAGGAGGATAAGTGTTTTGGAGAGTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: NCFPVKTLESPL*QEDKCFGELCM
Trigger: CATGCACAACTCTCCAAAACACTTATCCTCCTGCAAGAGTGGGCTTTCCAGGGTCTTTACTGGGAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp GAACCTGCTGTTGCTCTAAGGCCATTCTGCTTTGGTTaGGCTCAGCCTCTAGTCCATTTCCTTAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: EPAVALRPFCFG*AQPLVHFLKAH
Trigger: ATGAGCCTTAAGGAAATGGACTAGAGGCTGAGCCAAACCAAAGCAGAATGGCCTTAGAGCAACAGCAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLDEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: NLYLLPMGLLTSAGRCHQLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...CTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR TCA 90 bp CAGGGAGAAGAGGTTGGGAACGTGGGTCTGCTTTACCAGAGAGTCAAAGAAAGGTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QGEEVGNVGLLYQRVKERLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...CCTTTCTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTTCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR TCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSDLNLR*PRVFPP
Trigger: TGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTC...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TATGACCAGGAAGACAGAGCCCAGCCCTGCTATAGTCCAGTTGCTCTCCCACAGGCATCAGCTGTTGAATaGATGTTCAACATTATGCTT +
Preference number: 4 (lower is better)
Translates to: YDQEDRAQPCYSPVALPQASAVE*MFNIML
Trigger: AAGCATAATGTTGAACATTCATTCAACAGCTGATGC...CTGTGGGAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTCTTCCTGGTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCAGCAAAGGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAAT +
Preference number: 4 (lower is better)
Translates to: LSSAHGPPHFSREMSSAKASATV*CFSQIN
Trigger: ATTTATTTGACTAAAGCATCACACAGTGGCACTAGC...CTTTGCTGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680681.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGAAGGGAACCATTGGTaGGGCTTGCTCTCCTATCTA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREEGNHW*GLLSYL
Trigger: TAGATAGGAGAGCAAGCCTCACCAATGGTTCCCTTC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680681.1
CDS-3UTR TCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTCTTTTGCACAACTGTTaGCTTGGGTTTGAGGCAACT +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSLLHNC*LGFEAT
Trigger: AGTTGCCTCAAACCCAAGTCAACAGTTGTGCAAAAG...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTTCACCATGTGGCAGCTaGCAGGGTCACTATAGACTC +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSSPCGS*QGHYRL
Trigger: GAGTCTATAGTGACCCTGTCAGCTGCCACATGGTGA...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510915.6
CDS-3UTR TCA 90 bp CTGTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATTGTTTAGTTTGGCCTTaGAATTATGATATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLLLVTKVNHGGVVQGNCLVWP*NYDIPA
Trigger: GGCAGGGATATCATAATTTCAAGGCCAAACTAAACA...ATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCCCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTGTATACCAGAGACTaGCTGTGTACAGCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREVYTRD*LCTASG
Trigger: ACCACTCGCTGTACACAGGCAGTCTCTGGTATACAC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCCATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGTGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLCHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLCHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGCCACTGTCCACAATaGTCTTGTCATAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSCHCPQ*SCHSCT
Trigger: AGTACAACTATGACAAGAGCATTGTGGACAGTGGCA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGTTCCAAGGGGTGGTaGCTGCTTGCCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVCSKGW*LLASTP
Trigger: TGGTGTGCTGGCAAGCAGGCACCACCCCTTGGAACA...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTCAGCAAAGTCATCATaGTGCTGGCGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVSAKSS*CWRRQR
Trigger: CCGCTGCCTGCGCCAGCAGCATGATGACTTTGCTGA...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLLLVTKVNHGGVVQGNLSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...GAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp ACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTCTCTGTCCACTGGCCTaGAATGATAAAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: TCDQSEPRRCGPGESLSSLCPLA*NDKRHA
Trigger: TGCATGTCTTTTATCATTGCAGGCCAGTGGACAGAG...AGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTGGCCAAGTCTTCCTTTaGTGCCACTGTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSGQVFL*CHCLGF
Trigger: GAAGCCAAGACAGTGGCAGCAAAGGAAGACTTGGCC...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTAGTCGTCTTGGGACGTaGCCACATCTTCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFSRLGT*PHLPLA
Trigger: GGCCAGTGGAAGATGTGGCCACGTCCCAAGACGACT...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCATGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCAGAGAATTTAAAGGAATaGTGGACAAAGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAENLKE*WTKVQG
Trigger: GCCCTGAACCTTTGTCCACCATTCCTTTAAATTCTC...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AAAAGAGCTCTTTGGCTAGATAAGCCCTTCCCATCTCACTTTTGGTCAGGCTGCACTAGGACTGGTGAGTaGTTGTGTTTCTGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KRALWLDKPFPSHFWSGCTRTGE*LCFCLS
Trigger: GGAAAGGCAGAAACACAACCACTCACCAGTCCTAGT...GCAGCCTGACCAAAAGTGAGATGGGAAGGGCTTATCTAGCCAAAGAGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLCFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCAGACATGCAGACCAATaGGAAAGGCCCCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFRHADQ*ERPQMQ
Trigger: CTGCATTTGGGGCCTTTCCCATTGGTCTGCATGTCT...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTGTCAGTTTAAGGAGCTaGACTTCCTGGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSVSLRS*TSWDLL
Trigger: AAGGAGGTCCCAGGAAGTCCAGCTCCTTAAACTGAC...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATGTCAGTTTAAGGAGCTaGACTTCCTGGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHVSLRS*TSWDLL
Trigger: AAGGAGGTCCCAGGAAGTCCAGCTCCTTAAACTGAC...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGGTCCACCCTATTTTCTaGACAGAAATTAGCACAACC +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLVHPIF*TEISTT
Trigger: GGTTGTGCTAATTTCTGTCCAGAAAATAGGGTGGAC...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CCTCTCCTTCTCCTCTTTCCAGCCGCCCCCATTTGTATAAATAGTCAATCTAGTACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PLLLLFPAAPICINSQSSTCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...ACTAGATTGACTATTTATACAAATGGGGGCGGCTGGAAAGAGGAGAAGGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GACACACGCCAAGGTAACCTGCGTGTGATGCCAGTACTTCTGAAACTAAGAAAACATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: DTRQGNLRVMPVLLKLRKHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...TTTTCTTAGTTTCAGAAGTACTGGCATCACACGCAGGTTACCTTGGCGTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGACAAAGGTTCAGGGCTaGAGTTTCAAGCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWTKVQG*SFKQQN
Trigger: ATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGT...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTGCATCAGCTGTTGAATaGATGTTCAACATTATGCTT +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPASAVE*MFNIML
Trigger: AAGCATAATGTTGAACATTCATTCAACAGCTGATGC...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTAGGGTAGGAAGGCAATaGAACCACTCTGAATTATGT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLRVGRQ*NHSELC
Trigger: ACATAATTCAGAGTGGTTTCATTGCCTTCCTACCCT...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGGACAGGCCAACATTGTaGAGTCCTCACCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRDRPTL*SPHPFP
Trigger: TGGGAAAGGGTGAGGACTTCACAATGTTGGCCTGTC...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCACCACTGCAAAGTTACTaGTGCCTGTATCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAPLQSY*CLYPPG
Trigger: TCCTGGTGGATACAGGCAGCAGTAACTTTGCAGTGG...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528053.5
CDS-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGTTGGGAACGTGGGTCTaGTTTACCAGAGAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRELGTWV*FTRESK
Trigger: CTTTGACTCTCTGGTAAAGCAGACCCACGTTCCCAA...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCAGCACCACAAAGCTaGAGGGAGAAGAGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFPAPQS*REKRLG
Trigger: TCCCAACCTCTTCTCCCTGCAGCTTTGTGGTGCTGG...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCACATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VFLSDSVVMGCSQSAKAAHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...TGCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AAAGCTGCAGGGAGAAGAGGTTGGGAACGTGGGTCTGCTTTACCAGAGAGTCAACATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: KAAGRRGWERGSALPESQHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...TTGACTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTTCTCCCTGCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514464.2
CDS-3UTR GCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTACATAGTTGTACTCCTTaGAGTCCATTTTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLHSCTP*SPFSDP
Trigger: AGGATCTGAAAATGGACTGCAAGGAGTACAACTATG...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTGGAATCTCTATCTTCTaGCCATGGGCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSGISIF*PWASSL
Trigger: AAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTCC...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGACAGAGCCCAGCCCTaGTATAGTCCAGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFDRAQP*YSPVAL
Trigger: GAGAGCAACTGGACTATAGCAGGGCTGGGCTCTGTC...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGCAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWQVGVG*SGYTRK
Trigger: TTTCCTAGTATACCCACTGCATCCTACTCCTACCTG...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGCTCTGTCCACTGGCCTaGAATGATAAAAGACATGCA +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWLCPLA*NDKRHA
Trigger: TGCATGTCTTTTATCATTGCAGGCCAGTGGACAGAG...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTTCTGGGACCTAAAATaGTTACAGGTACTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSFWDLK*LQVLAV
Trigger: TACTGCTAGTACCTGTAAGCATTTTAGGTCCCAGAA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGTGTTCCCCCTCATCTTaGAATTCCTTTGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKCSPSS*NSFGGC
Trigger: GCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACA...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTAAGAGGTTGGGAACGTaGGTCTGCTTTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSKRLGT*VCFTRE
Trigger: CTCTCTGGTAAAGCAGACCCACGTTCCCAACCTCTT...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCAGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGCTTCAAACACTTTCTTaGGCAAACGAAGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWLQTLS*ANEGWW
Trigger: CCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAG...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCAAATGTTCCAAGGGGTaGTGCCTGCTTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVKCSKG*CLLAST
Trigger: TGTGCTGGCAAGCAGGCACCACCCCTTGGAACATTT...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLAVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTGAGAATTTAAAGGAATaGTGGACAAAGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCAWERAPQCYSFLFRISENLKE*WTKVQG
Trigger: GCCCTGAACCTTTGTCCACCATTCCTTTAAATTCTC...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGTTCCCATCTCACTTTTaGTCAGGCTGCAACCACAGA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREFPSHF*SGCNHR
Trigger: TCTGTGGTTGCAGCCTGACCAAAAGTGAGATGGGAA...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTGGAAAGGTGGCAAAATaGAAGACCAGTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSGKVAK*KTSSIV
Trigger: AACAATAGAACTGGTCTTCCATTTTGCCACCTTTCC...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTTTCCCATTCACTTCTaGTCTCCTAGTCTAGCTAAT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSFPIHF*SPSLAN
Trigger: ATTAGCTAGACTAGGAGACCAGAAGTGAATGGGAAA...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCCTTCCATGTCCAAGGTaGCAAAAGGGCCTTCCACCG +
Preference number: 4 (lower is better)
Translates to: CISHTLGIMLVPLCDALVLPCPR*QKGLPP
Trigger: CGGTGGAAGGCCCTTTTGTCACCTTGGACATGGAAG...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCACATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRAHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREDLNLR*PRVFPP
Trigger: TGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTTGCATCCTCTCCTACTaGCTTTGGCCAGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPCILSY*LWPAGK
Trigger: TTTCCCTGCTGGCCAAAGTCAGTAGGAGAGGATGCA...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAAT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLASATV*CFSQIN
Trigger: ATTTATTTGACTAAAGCATCACACAGTGGCACTAGC...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGCTTCTAATCAAGCTCTaGCAGGCCAACATTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRELLIKL*QANIVK
Trigger: CTTCACAATGTTGGCCTGTCAGAGCTTGATTAGAAG...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTCDQSEPRRCGPGESLSLDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...AGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GAATCTCTATCTTCTGCCCATGGGCCTCCTCACTTCAGCAGGGAGATGTCATCACTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESLSSAHGPPHFSREMSSLDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...TGATGACATCTCCCTGCTGAAGTGAGGAGGCCCATGGGCAGAAGATAGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510915.6
ENST00000514464.2
ENST00000680681.1
CDS-3UTR GCA 90 bp CTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTGCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVTKVNHGGVVQGNLYLLLDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...CAGAAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTTGCTCTGGCCACAGGTaGCATCTGTGTCTCCTACTT +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFCSGHR*HLCLLL
Trigger: AAGTAGGAGACACAGATGGCACCTGTGGCCAGAGCA...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCGCTTGGTCTCTTCTCTaGCAGGGTACCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: CISHTLGIMLVPLCDALVAWSLL*QGTTGT
Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAGAGACCAAGC...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGACCATTGGTGAGGCTTaGTCTCCTATCTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRETIGEA*SPIYCS
Trigger: TGAGCAATAGATAGGAGAGCAAGCCTCACCAATGGT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680681.1
CDS-3UTR GCA 90 bp GGATCAGTCAGAAAGCAACACAAGTGTTGGCGACCCCTGTTCTCCCTTCTCCCTAAACTATGTATATTATaGAGAAACAGTCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GSVRKQHKCWRPLFSLLPKLCIL*RNSLFP
Trigger: GGGGAACAGACTGTTTCTGCATAATATACATAGTTT...AGGGAGAAGGGAGAACAGGGGTCGCCAACACTTGTGTTGCTTTCTGACTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCACCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGCAAACGAAGGTTGGTaGTGCCACTGTCCACAATGC +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVANEGW*CHCPQC
Trigger: GCATTGTGGACAGTGGCACCACCAACCTTCGTTTGC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCGTGATGCGGAAGGACTaGTTGGTAACCTCACCCATT +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVVMRKD*LVTSPI
Trigger: AATGGGTGAGGTTACCAACCAGTCCTTCCGCATCAC...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRNSSCT*QALTAK
Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680971.1
CDS-3UTR CCA 90 bp TCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTAGTATTCTTGTTTTATTaGTTTATGGCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPTCDQSEPRRCGPGESLVFLFY*FMACGQ
Trigger: CTGCCCACAAGCCATAAACCAATAAAACAAGAATAC...TAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCTGCCCTGGAAAGGGCTaGGAAAAAGCCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVCPGKG*EKASFS
Trigger: GGAAAAACTGGCTTTTTCCCAGCCCTTTCCAGGGCA...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGCAGTGAGTGGAGAATaGGACAGTCATTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREAVSGE*DSHFSG
Trigger: TCCTGAAAAATGACTGTCCCATTCTCCACTCACTGC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCAGGAGCTGGACTTCCTaGGACCTCCTTGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: CISHTLGIMLVPLCDALVRSWTS*DLLGIL
Trigger: CAAGATGCCAAGGAGGTCCCAGGAAGTCCAGCTCCT...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp GTGTCTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTTTTAGGTTTTATACCTaGGAAAGCTGTGACTCTATT +
Preference number: 4 (lower is better)
Translates to: VSPTCDQSEPRRCGPGESFRFYT*ESCDSI
Trigger: AATAGAGTCACAGCTTTCCCAGGTATAAAACCTAAA...AGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp GAAAACAACACCCATCTTCTGAGATGGGATGCTATCTaGGAGATGAGGTCTAAAACTAGGACTGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ENNTHLLRWDAI*EMRSKTRTGEW
Trigger: CCACTCACCAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313005.10
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRTCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREDEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCTCTCCACCCGCACAATaGTCACCTCATAATACCACT +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVSPPAQ*SPHNTT
Trigger: AGTGGTATTATGAGGTGATCATTGTGCGGGTGGAGA...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGATGCTATCTTGGAGATaGGGTCTAAAACTAGGACTG +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDREMLSWR*GLKLGL
Trigger: CAGTCCTAGTTTTAGACCTCATCTCCAAGATAGCAT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp GCTCTTCCCACTAACACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGAGGGTAGGAAGGCAATaGAACCACTCTGAATTATGT +
Preference number: 4 (lower is better)
Translates to: ALPTNTGTVVYYARTDRERVGRQ*NHSELC
Trigger: ACATAATTCAGAGTGGTTTCATTGCCTTCCTACCCT...CTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGTGTTAGTGGGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTAACCAAGTTGTTTGGTaGCCTTGGGTGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFNQVVW*PWVSSR
Trigger: TCTGGAGCTCACCCAAGGTCACCAAACAACTTGGTT...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTCTTGATGGATTTGACTaGAGCTTCAAACACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLLDGFD*SFKHFL
Trigger: AAGAAAGTGTTTGAAGCTGCAGTCAAATCCATCAAG...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510630.5
ENST00000510915.6
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTTTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGTTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLAFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATGTTAGGATATTTCAGTaGTGCCTATCATATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYVRIFQ*CLSYVE
Trigger: TTCTACATATGATAGGCAGCACTGAAATATCCTAAC...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCACAAAGCAGCACCAAGTaGAGTGGGAATGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAQSSTK*SGNEEN
Trigger: GTTCTCTTCATTCCCACTGCACTTGGTGCTGCTTTG...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CAGTGTTACTCTTTCTTGTTCAGGATCAGTCAGAAAGCAACACAAGTGTTGGCGCTTCCTCATTTCTCTTaGCTCACTTGCCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: QCYSFLFRISQKATQVLALPHFS*LTCPGL
Trigger: TAAACCTGGGCAAGTGAGGCAAGAGAAATGAGGAAG...CGCCAACACTTGTGTTGCTTTCTGACTGATCCTGAACAAGAAAGAGTAACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGTTCTGGGACCTAAAATaGTTACAGGTACTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWFWDLK*LQVLAV
Trigger: TACTGCTAGTACCTGTAAGCATTTTAGGTCCCAGAA...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp CTCCTTGTATTTCCCTCTCCCTTATCAGGTAATTCCACACTTAGCAGGTCCCATCTTAAGGCTCATGTATaGAGATTTAAAGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLVFPSPLSGNSTLSRSHLKAHV*RFKAWC
Trigger: GCACCAGGCTTTAAATCTGCATACATGAGCCTTAAG...ATGGGACCTGCTAAGTGTGGAATTACCTGATAAGGGAGAGGGAAATACAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTCCTGTGTACAGCGAGTaGTCGATACCTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPPVYSE*SIPPMI
Trigger: GATCATTGGAGGTATCGACCACTCGCTGTACACAGG...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCGAGAATTTAAAGGAATaGTGGACAAAGGTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFENLKE*WTKVQG
Trigger: GCCCTGAACCTTTGTCCACCATTCCTTTAAATTCTC...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATCTTAATTCATGTGTTAAGTaGAACTTCTTAGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLVTKVNHGGVVQGNLYLNSCVK*NFLVGT
Trigger: AGTGCCCACTAAGAAGTTCCACTTAACACATGAATT...AAGATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATTATTTCTCATACTCTTaGTATAATGCTAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYYFSYS*YNASAT
Trigger: AGTGGCACTAGCATTATACCAAGAGTATGAGAAATA...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp AGTCTTCCTGTCAGACTCTGTAGTTATGGGGTGTTCCCAGTCAGCCAAAGCAGCTATTTCTCATACTCTTaGTATAATGCTAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: SLPVRLCSYGVFPVSQSSYFSYS*YNASAT
Trigger: AGTGGCACTAGCATTATACCAAGAGTATGAGAAATA...GCTGCTTTGGCTGACTGGGAACACCCCATAACTACAGAGTCTGACAGGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACTTGTGACCAAAGTGAACCACGGAGGTGTGGTCCAGGGGAATCTCTATTTTAGGTTTTATACCTaGGAAAGCTGTGACTCTATT +
Preference number: 4 (lower is better)
Translates to: LLLVTKVNHGGVVQGNLYFRFYT*ESCDSI
Trigger: AATAGAGTCACAGCTTTCCCAGGTATAAAACCTAAA...ATAGAGATTCCCCTGGACCACACCTCCGTGGTTCACTTTGGTCACAAGTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGTTTCCCATTCACTTCTaGTCTCCTAGTCTAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWFPIHF*SPSLAN
Trigger: ATTAGCTAGACTAGGAGACCAGAAGTGAATGGGAAA...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
3UTR CAA 72 bp TGTATATTATGCAGAAACAGTCTGTTCCCCCTCATCTaGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CILCRNSLFPLI*QFLWGMQIVGK
Trigger: CTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCTGCATAATATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313005.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTACTTGTCTGATTCAGTaGTGGCAGCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFTCLIQ*WQQCWH
Trigger: GTGCCAACATTGCTGCCATCACTGAATCAGACAAGT...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTGCTACTTCTTATAGCCTAATAGGAAGAAATCCAGGCAGGGGTTATAGGGCAGATGAAGAACTTGTCTaGTTCAGTGATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LATSYSLIGRNPGRGYRADEELV*FSDGSN
Trigger: ATTGCTGCCATCACTGAATCAGACAAGTTCTTCATC...TGCCCTATAACCCCTGCCTGGATTTCTTCCTATTAGGCTATAAGAAGTAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGCATAGGCTATGGTCATaGGGGTTGACTCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVHRLWS*GLTHLS
Trigger: AGACAGATGAGTCAACCCTCATGACCATAGCCTATG...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTACAACACCCATCTTCTaGGATGGGATGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPTTPIF*DGMLSW
Trigger: CCAAGATAGCATCCCATCTCAGAAGATGGGTGTTGT...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR TCA 90 bp TGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTGATGCTTTAGTCATTTGGGGGAAAGAGTaGGCCTATGACCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CISHTLGIMLVPLCDALVIWGKE*AYDQED
Trigger: GTCTTCCTGGTCATAGGCTCACTCTTTCCCCCAAAT...GACTAAAGCATCACACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTAGGGTAGGAAGGCAATaGAACCACTCTGAATTATGT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSRVGRQ*NHSELC
Trigger: ACATAATTCAGAGTGGTTTCATTGCCTTCCTACCCT...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTCTTTTCTCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: FEVTKSIPASRVLLSSLFSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...GAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp AGTTGTGCATGGGAGCGAGCGCCTCAGTGTTACTCTTTCTTGTTCAGGATCAGTGTTAGGATATTTCAGTaGTGCCTATCATATGTAGAA +
Preference number: 4 (lower is better)
Translates to: SCAWERAPQCYSFLFRISVRIFQ*CLSYVE
Trigger: TTCTACATATGATAGGCAGCACTGAAATATCCTAAC...ACTGATCCTGAACAAGAAAGAGTAACACTGAGGCGCTCGCTCCCATGCACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp GGCAATCTTTGCACCAATGTTAGGCTTGTTTATACAGTCCCTGTCTCTAAAGCACAGGTAGGAGTAGGATaGAGTGGGTATACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: GNLCTNVRLVYTVPVSKAQVGVG*SGYTRK
Trigger: TTTCCTAGTATACCCACTGCATCCTACTCCTACCTG...TGCTTTAGAGACAGGGACTGTATAAACAAGCCTAACATTGGTGCAAAGATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTAGATTTAAAGCCTGGTaGTCACCCACTGTCCAACCA +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPRFKAW*SPTVQP
Trigger: TGGTTGGACAGTGGGTGAGCACCAGGCTTTAAATCT...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680971.1
CDS-3UTR CCA 90 bp AGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGTGACCAAGTGGATGACTGTGAGATaGCAAACTTGTAACAGTCGT +
Preference number: 4 (lower is better)
Translates to: RAEVSSSRISRLKFEVTKWMTVR*QTCNSR
Trigger: ACGACTGTTACAAGTTTGCCATCTCACAGTCATCCA...CTTGGTCACCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392937.10
ENST00000510915.6
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCTGTTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVCFIGL*LVGSWL
Trigger: CAGCCAGCTGCCCACAAGCCATAAACCAATAAAACA...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp CTCCTACCTATTCCTTTTAGCACCTTGGCTGCAAAGCTCCAGAGGAAGATTTGGGTATTCTTGTTTTATTaGTTTATGGCTTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLPIPFSTLAAKLQRKIWVFLFY*FMACGQ
Trigger: CTGCCCACAAGCCATAAACCAATAAAACAAGAATAC...CCAAATCTTCCTCTGGAGCTTTGCAGCCAAGGTGCTAAAAGGAATAGGTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTTATGGTCATGAGGGTTaGCTCATCTGTCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFYGHEG*LICLWN
Trigger: ATTCCACAGACAGATGAGTCAACCCTCATGACCATA...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGGACTTAAATTTGAGGTaGCCAAGAGTATTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVDLNLR*PRVFPP
Trigger: TGGCGGGAATACTCTTGGTCACCTCAAATTTAAGTC...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTTCCTTCTTTGTCTTTCATCCTTGCCTATCACCTCACAGATGGATTCTTCCTGATAGGGGAAAAAGATaGCCTTCATCAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSFFVFHPCLSPHRWILPDRGKR*PSSRSS
Trigger: AGAGCTCCTTGATGAAGGTCATCTTTTTCCCCTATC...AGGAAGAATCCATCTGTGAGGTGATAGGCAAGGATGAAAGACAAAGAAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR GCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTTTCCCGCCAGCAGAGTaGTTCTTTCTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFFPPAE*FFLLFS
Trigger: AGAAAAGAGAAGAAAGAAGCACTCTGCTGGCGGGAA...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR GCA 90 bp CTTAAATTTGAGGTGACCAAGAGTATTCCCGCCAGCAGAGTGCTTCTTTCTTCTTCAAGAGGCAATCTTTaGACCAATGTTAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LKFEVTKSIPASRVLLSSSRGNL*TNVRLV
Trigger: AACAAGCCTAACATTGGTGCAAAGATTGCCTCTTGA...AGAAGAAAGAAGCACTCTGCTGGCGGGAATACTCTTGGTCACCTCAAATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AGCCATAAAGCACTGTATTTCTCATACTCTTGGTATAATGCTAGTGCCACTGTGTTAGGTAGAGTGAGATaGCTGGGAAAATGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHKALYFSYSWYNASATVLGRVR*LGKCSK
Trigger: CTTGGAACATTTTCCCAGTCATCTCACTCTACCTAA...CACAGTGGCACTAGCATTATACCAAGAGTATGAGAAATACAGTGCTTTATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTAGGGTAGGAAGGCAATaGAACCACTCTGAATTATGT +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFRVGRQ*NHSELC
Trigger: ACATAATTCAGAGTGGTTTCATTGCCTTCCTACCCT...AAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTTGTCCACCATTCCTTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR TCA 90 bp AAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTCCCGACTTAAATTTGAGGGCTAGTGCCACTGTGTaGTGCTTTAGTCAAATAAAT +
Preference number: 4 (lower is better)
Translates to: KGSGLKFQAAEFPDLNLRASATV*CFSQIN
Trigger: ATTTATTTGACTAAAGCATCACACAGTGGCACTAGC...CCTCAAATTTAAGTCGGGAAATTCTGCTGCTTGAAACTTCAGCCCTGAACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392937.10
ENST00000528053.5
ENST00000680681.1
ENST00000680971.1
CDS-3UTR CCA 90 bp ACTGGTACCGTAGTTTACTATGCTAGAACTGATAGGGAGGTAATGAACTTGGTCGGAAAGGTGGCAAAATaGAAGACCAGTTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: TGTVVYYARTDREVMNLVGKVAK*KTSSIV
Trigger: AACAATAGAACTGGTCTTCCATTTTGCCACCTTTCC...GACCAAGTTCATTACCTCCCTATCAGTTCTAGCATAGTAAACTACGGTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392937.10
ENST00000680971.1
CDS-3UTR CCA 90 bp TTTAAAGGAATGGTGGACAAAGGTTCAGGGCTGAAGTTTCAAGCAGCAGAATTTGTCCACCCTATTTTCTaGACAGAAATTAGCACAACC +
Preference number: 4 (lower is better)
Translates to: FKGMVDKGSGLKFQAAEFVHPIF*TEISTT
Trigger: