RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BABAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158019

Ensembl transcript IDs: ENST00000342045.6, ENST00000344773.6, ENST00000361704.6, ENST00000379624.6, ENST00000379629.7, ENST00000379632.6, ENST00000436924.5, ENST00000492702.1, ENST00000496951.1, ENST00000603461.1, ENST00000604932.1

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTaGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCT +
Preference number: 1 (lower is better)
Translates to: FQAASRKRLYVLTRM*TGSLAGHLSRLVFP
Trigger: AGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR GCA 90 bp ACCTCTCAAGACTGGTGTTTCCTAGAGCTTTCCATTGGCAAATGCTaGCTCCTGGAACTGAGGGACAAAGGTTTTGAAATAAGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: TSQDWCFLELSIGKC*LLELRDKGFEISPK
Trigger: CTTTGGGCTTATTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
3UTR GCA 90 bp ACCTCTCAAGACTGGTGTTTCCTAGAGCTTTCCATTGGCAAATGCTaGCTCCTGGAACTGAGGGACAAAGGTTTTGAAATAAGCCCTATG +
Preference number: 1 (lower is better)
Translates to: TSQDWCFLELSIGKC*LLELRDKGFEISPM
Trigger: CATAGGGCTTATTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
3UTR CCA 90 bp GGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTaGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAA +
Preference number: 1 (lower is better)
Translates to: GHLILELKRSQRQRL*KKGVGIPEALLSPE
Trigger: TTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp CCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PPASSSWISAVGAAWGVQAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...TTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 2 (lower is better)
Translates to: GPPASSSWISAVGAAWGVAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: RCREDIPGGFQEAAVCADDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAATGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: VKGSRIQGPPASSSWISAAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAAGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: VKGSRIQGPPASSSWISAGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp GCTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: ADTHVDRQSGWPPLKTGVDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...AACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTSGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: ACGQAVWLATSQDWCFLESGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...CTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKSGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 2 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp TCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 2 (lower is better)
Translates to: SRIQGPPASSSWISAVGAAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 2 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGAGGGACAAAGGTTTTaGAATAAGCCCAAAGTGATC +
Preference number: 2 (lower is better)
Translates to: QGPPASSSWISAVGAAWGEGQRF*NKPKVI
Trigger: GATCACTTTGGGCTTATTTCAAAACCTTTGTCCCTC...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344773.6
3UTR-3UTR GCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACACTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGG +
Preference number: 2 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTLSIGK*CLLELR
Trigger: CCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAG...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGGGAGTAACCCGAAGTaGAGGGCTCTAGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPGSNPK*RALGSR
Trigger: CCTGGATCCTAGAGCCCTTCACTTCGGGTTACTCCC...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 2 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCATGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: GRKAWAFLRLYFPRKITACGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTGGGAGTAACCCGAAGTaGAGGGCTCTAGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: GVGIPEALLSPENYCTIIGSNPK*RALGSR
Trigger: CCTGGATCCTAGAGCCCTTCACTTCGGGTTACTCCC...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GAAGTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: EVKGSRIQGPPASSSWISAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...TGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCCCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: KKGVGIPEALLSPENYCTPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 2 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGGGGAGTAACCCGAAGTaGAGGGCTCTAGGATCCAGG +
Preference number: 2 (lower is better)
Translates to: SEGHLILELKRSQRQRLWGSNPK*RALGSR
Trigger: CCTGGATCCTAGAGCCCTTCACTTCGGGTTACTCCC...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGGAGGGACAAAGGTTTTaGAATAAGCCCTATGCAATT +
Preference number: 2 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKEGQRF*NKPYAI
Trigger: AATTGCATAGGGCTTATTTCAAAACCTTTGTCCCTC...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp GAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGAGGGACAAAGGTTTTaGAATAAGCCCTATGCAATT +
Preference number: 2 (lower is better)
Translates to: EQNAAVKTFQAASRKRLYEGQRF*NKPYAI
Trigger: AATTGCATAGGGCTTATTTCAAAACCTTTGTCCCTC...ATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: SEGHLILELKRSQRQRLWCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: SEGHLILELKRSQRQRLWSKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR TCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 2 (lower is better)
Translates to: IPEALLSPENYCTIICEFSKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CCA 90 bp AGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAATTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 2 (lower is better)
Translates to: RKNSEGHLILELKRSQRQFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...TTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR GCA 90 bp AGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAATCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: RKNSEGHLILELKRSQRQSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...TTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR TCA 72 bp CATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCAGTCTGGCTGGCCACC +
Preference number: 3 (lower is better)
Translates to: HSRRLPGSGCMC*HACGQAVWLAT
Trigger: GGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR CCA 72 bp GGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAA +
Preference number: 3 (lower is better)
Translates to: GSRIQGPPASSS*ISAVGAAWGVQ
Trigger: TTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR-3UTR CAA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 3 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKTSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR TCA 72 bp GCGTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGT +
Preference number: 3 (lower is better)
Translates to: ACKSCCVSKTLP*RHSRRLPGSGC
Trigger: ACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR CCA 72 bp TGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTaGTGTTTCCTAGAGCTTTCCATTGGCAAATGCTGC +
Preference number: 3 (lower is better)
Translates to: CGQAVWLATSQD*CFLELSIGKCC
Trigger: GCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR CCA 72 bp CACCTCTCAAGACTGGTGTTTCCTAGAGCTTTCCATTaGCAAATGCTGCCTCCTGGAACTGAGGGACAAAGG +
Preference number: 3 (lower is better)
Translates to: HLSRLVFPRAFH*QMLPPGTEGQR
Trigger: CCTTTGTCCCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTGAGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR TCA 72 bp GAGACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGAAAATTACTGCACCAT +
Preference number: 3 (lower is better)
Translates to: ETKALEERRGHS*GFTFPGKLLHH
Trigger: ATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
3UTR GCA 72 bp CAAGACTGGTGTTTCCTAGAGCTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGGGACAAAGGTTTTGAA +
Preference number: 3 (lower is better)
Translates to: QDWCFLELSIGK*CLLELRDKGFE
Trigger: TTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
3UTR TCA 72 bp TTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTaGGTTTATTTCTTCCAACTAAGAAATAGAGGCAAG +
Preference number: 3 (lower is better)
Translates to: FTFPGKLLHHNL*VYFFQLRNRGK
Trigger: CTTGCCTCTATTTCTTAGTTGGAAGAAATAAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ADTHVDRQSGWPPLKTGVAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...AACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGGAAAAGCTGGGATATaGAGAGCTGAGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGPPASSSWISAVGAAWGGKAGI*RAEEPP
Trigger: TGGAGGCTCCTCAGCTCTTCATATCCCAGCTTTTCC...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: PPASSSWISAVGAAWGVQSKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...TTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACGGGAGTAACCCGAAGTaGAGGGCTCTAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADGSNPK*RALGSR
Trigger: CCTGGATCCTAGAGCCCTTCACTTCGGGTTACTCCC...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RIQGPPASSSWISAVGAARRGHS*GFTFPG
Trigger: TCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCT...GGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTGCAAAGGCCAGGACTTaGTCCCACGGGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFAKART*SHGLQA
Trigger: TGCCTGCAGCCCGTGGGAGCAAGTCCTGGCCTTTGC...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CCA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPPASSSWISAVGAAWGVVTSTA*GTPGWL
Trigger: AAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCAC...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADSGIQT*GGSSPG
Trigger: TCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGA...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RIQGPPASSSWISAVGAASGIQT*GGSSPG
Trigger: TCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGA...GGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCAAACGGACTGAAATGTaGGAGTTGGCTGGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: QGPPASSSWISAVGAAWGKRTEM*ELAGLE
Trigger: CTCGAGACCAGCCAACTCTCACATTTCAGTCCGTTT...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADSKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKSKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACAAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAVKTFQAASRKRLYVLTRRGHS*GFTFPG
Trigger: TCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCT...TGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGGGCTGCAGGCATCTCTaGTCCCTTGGCATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLGCRHL*SLGIPL
Trigger: CAAAGGGATGCCAAGGGAGCAGAGATGCCTGCAGCC...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CCA 90 bp AGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RIQGPPASSSWISAVGAASLGYT*VASVSS
Trigger: TGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCT...GGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCATGCTCAATTCGAGGTaGCAAGTACAGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QGPPASSSWISAVGAAWGMLNSR*QVQLGV
Trigger: TACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAT...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCTGGGATATGAAGAGCTaGGGAGCCTCCAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGWDMKS*GASKCM
Trigger: CATGCACTTGGAGGCTCCTCAGCTCTTCATATCCCA...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAACTGCACCTTGTTGGTaGGCAGGTGGCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKTAPCW*AGGILE
Trigger: CTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGT...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGGGGAGTAACCCGAAGTaGAGGGCTCTAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ACGQAVWLATSQDWCFLEGSNPK*RALGSR
Trigger: CCTGGATCCTAGAGCCCTTCACTTCGGGTTACTCCC...CTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFRRGHS*GFTFPG
Trigger: TCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCT...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTRRGHS*GFTFPG
Trigger: TCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCT...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGCAATTTGGAGAGGATaGCTGGATGTCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKAIWRG*LDVRQS
Trigger: GCTCTGCCTGACATCCAGGCATCCTCTCCAAATTGC...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLVTSTA*GTPGWL
Trigger: AAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCAC...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFDRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: SRIQGPPASSSWISAVGADRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: SRIQGPPASSSWISAVGACGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGTTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GPPASSSWISAVGAAWGVFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGCAGTTCCTCTGGGGCTaGAGCAGCTTGCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ACGQAVWLATSQDWCFLEQFLWG*SSLQPV
Trigger: AACTGGCTGCAAGCTGCTCCAGCCCCAGAGGAACTG...CTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR TCA 90 bp CCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAGAGGAACGTAATCAATaGGACATCCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PPASSSWISAVGAAWGVQEERNQ*DILLLE
Trigger: TTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTC...TTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGAAACGGACTGAAATGTaGGAGTTGGCTGGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLKRTEM*ELAGLE
Trigger: CTCGAGACCAGCCAACTCTCACATTTCAGTCCGTTT...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAASGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: KRCREDIPGGFQEAAVCASKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...AGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFSLGYT*VASVSS
Trigger: TGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCT...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVSLGYT*VASVSS
Trigger: TGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCT...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGACAGGCAGTCTGGCTaGCCACCTCTCAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: VKGSRIQGPPASSSWISADRQSG*PPLKTG
Trigger: ACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTC...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAACGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGCAGTCGGGGCTGCCTaGGGCGTGCAAAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPAVGAA*GVQKLL
Trigger: CAGCAGCTTTTGCACGCCCCAGGCAGCCCCGACTGC...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGCCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGAAGATTCTGCAAAGCTaGGGGGTCTGGCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLKILQS*GVWQEF
Trigger: GAATTCCTGCCAGACCCCTCAGCTTTGCAGAATCTT...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAASGIQT*GGSSPG
Trigger: TCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGA...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCATGTGGGGATATTGCTaGAATCTACGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGMWGYC*NLRAAS
Trigger: TGAAGCTGCCCGTAGATTTCAGCAATATCCCCACAT...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTTGGGATATGAAGAGCTaGGGAGCCTCCAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCWDMKS*GASKCM
Trigger: CATGCACTTGGAGGCTCCTCAGCTCTTCATATCCCA...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTTGGGATATGAAGAGCTaGGGAGCCTCCAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: TRMWTGSLAGHLSRLVFPWDMKS*GASKCM
Trigger: CATGCACTTGGAGGCTCCTCAGCTCTTCATATCCCA...AGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACT +
Preference number: 4 (lower is better)
Translates to: GPPASSSWISAVGAAWGVLCQSD*EKQQYT
Trigger: AGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAG...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACT +
Preference number: 4 (lower is better)
Translates to: QGPPASSSWISAVGAAWGLCQSD*EKQQYT
Trigger: AGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAG...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GSRIQGPPASSSWISAVGAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...CCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp GCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: AAVKTFQAASRKRLYVLTLSIGK*CLLELR
Trigger: CCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAG...TGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCGGGCTGCCTGGGGCGTaGAAAAGCTGCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTGLPGA*KSCCVS
Trigger: GCTCACACAGCAGCTTTTGCACGCCCCAGGCAGCCC...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGTGGGGTACACCTGGGTaGCTTCAGTGTCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKWGTPG*LQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCA...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTTGGGGTACACCTGGGTaGCTTCAGTGTCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFWGTPG*LQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCA...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWVTSTA*GTPGWL
Trigger: AAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCAC...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFVTSTA*GTPGWL
Trigger: AAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCAC...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: KRCREDIPGGFQEAAVCAVTSTA*GTPGWL
Trigger: AAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCAC...AGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCGAGACATCCTCCTCCTaGAAAAGCTGGGATATGAAG +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGETSSS*KSWDMK
Trigger: CTTCATATCCCAGCTTTTCCAGGAGGAGGATGTCTC...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACTTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTGATGTCAGGCAGAGCTaGATTCCTCCCCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFDVRQS*IPPHLC
Trigger: ACAGAGATGGGGAGGAATCCAGCTCTGCCTGACATC...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGATGTGGGGATATTGCTaGAATCTACGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSRIQGPPASSSWISAVGMWGYC*NLRAAS
Trigger: TGAAGCTGCCCGTAGATTTCAGCAATATCCCCACAT...CCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGAAACGGACTGAAATGTaGGAGTTGGCTGGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWKRTEM*ELAGLE
Trigger: CTCGAGACCAGCCAACTCTCACATTTCAGTCCGTTT...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGGAGGGACAAAGGTTTTaGAATAAGCCCTATGCAATT +
Preference number: 4 (lower is better)
Translates to: GPPASSSWISAVGAAWGVEGQRF*NKPYAI
Trigger: AATTGCATAGGGCTTATTTCAAAACCTTTGTCCCTC...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAACCCTTGGCATCCCTTTaGTCTTTTGGCCATTTCATT +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKPLASL*SFGHFI
Trigger: AATGAAATGGCCAAAAGAGCAAAGGGATGCCAAGGG...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR GCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGGGGGCTGGAGCAGCTTaGAGCCAGTTTTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRGAGAA*SQFLQL
Trigger: CAGTTGCAAAAACTGGCTGCAAGCTGCTCCAGCCCC...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR GCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGCAATTTGGAGAGGATaGCTGGATGTCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VKGSRIQGPPASSSWISAAIWRG*LDVRQS
Trigger: GCTCTGCCTGACATCCAGGCATCCTCTCCAAATTGC...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCTGGGGTACACCTGGGTaGCTTCAGTGTCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASWGTPG*LQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCA...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRSLGYT*VASVSS
Trigger: TGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCT...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGGAGACATCCTCCTCCTaGAAAAGCTGGGATATGAAG +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLETSSS*KSWDMK
Trigger: CTTCATATCCCAGCTTTTCCAGGAGGAGGATGTCTC...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAAATGTGAGAGTTGGCTaGTCTCGAGGGAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKNVRVG*SRGKNR
Trigger: TCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATT...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCCTGAAATGTGAGAGTTaGCTGGTCTCGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGLKCES*LVSREK
Trigger: TTTTTCCCTCGAGACCAGCCAACTCTCACATTTCAG...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAACTACATTGGAATTGGTaGTATTGTTGCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PPASSSWISAVGAAWGVQLHWNW*YCCTSS
Trigger: GGAACTTGTGCAACAATATCACCAATTCCAATGTAG...TTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACCAAAAGGAAACGAGCTaGAAATTCACCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADQKETS*KFTSPV
Trigger: AACTGGACTGGTGAATTTTCAGCTCGTTTCCTTTTG...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTATGCTCAATTCGAGGTaGCAAGTACAGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFMLNSR*QVQLGV
Trigger: TACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAT...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGGGAAAAGCTGGGATATaGAGAGCTGAGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRGKAGI*RAEEPP
Trigger: TGGAGGCTCCTCAGCTCTTCATATCCCAGCTTTTCC...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGGAGGAACGTAATCAATaGGACATCCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKEERNQ*DILLLE
Trigger: TTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTC...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGACTGCACCTTGTTGGTaGGCAGGTGGCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRTAPCW*AGGILE
Trigger: CTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGT...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTSGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCAAGGCGTGGGCATTCCTaGGGCTTTACTTTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRKAWAFLRLYFPRKITARRGHS*GFTFPG
Trigger: TCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCT...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCGGGGACATTTTAACTTaGCTTGTAAATCACCACTGG +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGGDILT*LVNHHW
Trigger: CCAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCC...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR GCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCCTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASLSIGK*CLLELR
Trigger: CCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAG...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGGAGACATCCTCCTCCTaGAAAAGCTGGGATATGAAG +
Preference number: 4 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMETSSS*KSWDMK
Trigger: CTTCATATCCCAGCTTTTCCAGGAGGAGGATGTCTC...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGAGACATCCTCCTCCTaGAAAAGCTGGGATATGAAG +
Preference number: 4 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCETSSS*KSWDMK
Trigger: CTTCATATCCCAGCTTTTCCAGGAGGAGGATGTCTC...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGAGACATCCTCCTCCTaGAAAAGCTGGGATATGAAG +
Preference number: 4 (lower is better)
Translates to: EQNAAVKTFQAASRKRLYETSSS*KSWDMK
Trigger: CTTCATATCCCAGCTTTTCCAGGAGGAGGATGTCTC...ATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGAATGTGAGAGTTGGCTaGTCTCGAGGGAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: GSRIQGPPASSSWISAVGNVRVG*SRGKNR
Trigger: TCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATT...CCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTAATGTGAGAGTTGGCTaGTCTCGAGGGAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: ADTHVDRQSGWPPLKTGVNVRVG*SRGKNR
Trigger: TCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATT...AACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCCATTTCCATCCCATCTaGGGCTGTACGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGHFHPI*GCTDNF
Trigger: AAAATTATCCGTACAGCCCCAGATGGGATGGAAATG...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAATGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCTGTGGACAGGCAGTCTaGCTGGCCACCTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTCGQAV*LATSQD
Trigger: GTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACA...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTTTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGAAGCCCTATGCAATTTaGAGAGGATGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWKPYAI*RGCLDV
Trigger: GACATCCAGGCATCCTCTCCAAATTGCATAGGGCTT...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGCTACATTGGAATTGGTaGTATTGTTGCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLLHWNW*YCCTSS
Trigger: GGAACTTGTGCAACAATATCACCAATTCCAATGTAG...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCATCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRKAWAFLRLYFPRKITASGIQT*GGSSPG
Trigger: TCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGA...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTSGIQT*GGSSPG
Trigger: TCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGA...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCATGTGGGGATATTGCTaGAATCTACGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASMWGYC*NLRAAS
Trigger: TGAAGCTGCCCGTAGATTTCAGCAATATCCCCACAT...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAATGTGGGGATATTGCTaGAATCTACGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VKGSRIQGPPASSSWISAMWGYC*NLRAAS
Trigger: TGAAGCTGCCCGTAGATTTCAGCAATATCCCCACAT...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACCTTCATTTACATCCTTaGGAAGGTATGTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADLHLHP*EGMWGY
Trigger: ATATCCCCACATACCTTCTCAAGGATGTAAATGAAG...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACT +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLLCQSD*EKQQYT
Trigger: AGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAG...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAACACCTGTGCCAAAGTaGCTGAGAAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTTPVPK*LRKAAI
Trigger: TATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGT...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIISGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACTTTTGTAAAGCCTTCTaGATCATATTCCACGACACC +
Preference number: 4 (lower is better)
Translates to: RCREDIPGGFQEAAVCADFCKAF*IIFHDT
Trigger: GGTGTCGTGGAATATGATGCAGAAGGCTTTACAAAA...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTTTTGTAAAGCCTTCTaGATCATATTCCACGACACC +
Preference number: 4 (lower is better)
Translates to: RIQGPPASSSWISAVGAAFCKAF*IIFHDT
Trigger: GGTGTCGTGGAATATGATGCAGAAGGCTTTACAAAA...GGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGTTTATCTCTTGCTTCTaGAACTTAGTCCGATCGGTA +
Preference number: 4 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLFISCF*NLVRSV
Trigger: TACCGATCGGACTAAGTTCCAGAAGCAAGAGATAAA...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGTCCTCCAGTAATGTCTaGTATTCAAACATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVSSSNV*YSNMRR
Trigger: CCGCCTCATGTTTGAATACCAGACATTACTGGAGGA...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTCCTCCAGTAATGTCTaGTATTCAAACATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMSSSNV*YSNMRR
Trigger: CCGCCTCATGTTTGAATACCAGACATTACTGGAGGA...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGCTGAAATGTGAGAGTTaGCTGGTCTCGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVLKCES*LVSREK
Trigger: TTTTTCCCTCGAGACCAGCCAACTCTCACATTTCAG...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTCTGAAATGTGAGAGTTaGCTGGTCTCGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SRIQGPPASSSWISAVGALKCES*LVSREK
Trigger: TTTTTCCCTCGAGACCAGCCAACTCTCACATTTCAG...AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTCATTTCCATCCCATCTaGGGCTGTACGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: ADTHVDRQSGWPPLKTGVHFHPI*GCTDNF
Trigger: AAAATTATCCGTACAGCCCCAGATGGGATGGAAATG...AACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACATTTCCATCCCATCTaGGGCTGTACGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: AAVKTFQAASRKRLYVLTHFHPI*GCTDNF
Trigger: AAAATTATCCGTACAGCCCCAGATGGGATGGAAATG...TGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGCATTTCCATCCCATCTaGGGCTGTACGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLHFHPI*GCTDNF
Trigger: AAAATTATCCGTACAGCCCCAGATGGGATGGAAATG...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCACCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTCCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAACCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGGGGACATTTTAACTTaGCTTGTAAATCACCACTAT +
Preference number: 4 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKGDILT*LVNHHY
Trigger: ATAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCC...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACTACATTGGAATTGGTaGTATTGTTGCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: AAVKTFQAASRKRLYVLTLHWNW*YCCTSS
Trigger: GGAACTTGTGCAACAATATCACCAATTCCAATGTAG...TGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCAAAAGGAAACGAGCTaGAAATTCACCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKQKETS*KFTSPV
Trigger: AACTGGACTGGTGAATTTTCAGCTCGTTTCCTTTTG...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGCAAAAGGAAACGAGCTaGAAATTCACCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVQKETS*KFTSPV
Trigger: AACTGGACTGGTGAATTTTCAGCTCGTTTCCTTTTG...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGCAAAAGGAAACGAGCTaGAAATTCACCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWQKETS*KFTSPV
Trigger: AACTGGACTGGTGAATTTTCAGCTCGTTTCCTTTTG...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGCTTCATTTACATCCTTaGGAAGGTATGTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLLHLHP*EGMWGY
Trigger: ATATCCCCACATACCTTCTCAAGGATGTAAATGAAG...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GAAGTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAATGCTCAATTCGAGGTaGCAAGTACAGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: EVKGSRIQGPPASSSWISMLNSR*QVQLGV
Trigger: TACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAT...TGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAGGAAAAGCTGGGATATaGAGAGCTGAGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKGKAGI*RAEEPP
Trigger: TGGAGGCTCCTCAGCTCTTCATATCCCAGCTTTTCC...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCTTGTTGGTaGGCAGGTGGCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKITAPCW*AGGILE
Trigger: CTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGT...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAACTGCACCTTGTTGGTaGGCAGGTGGCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKTAPCW*AGGILE
Trigger: CTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGT...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACT +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFLCQSD*EKQQYT
Trigger: AGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAG...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCACACCTGTGCCAAAGTaGCTGAGAAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASTPVPK*LRKAAI
Trigger: TATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGT...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGGAGGGACAAAGGTTTTaGAATAAGCCTTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLEGQRF*NKPLLF
Trigger: AAAGAGCAAAGGCTTATTTCAAAACCTTTGTCCCTC...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379624.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTAGCAAAACGCTGCCGTaGAGACATTCCAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIISKTLP*RHSRRL
Trigger: AAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCT...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGGGGGACATTTTAACTTaGCTTGTAAATCACCACTGG +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWGDILT*LVNHHW
Trigger: CCAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCC...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR TCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTGAGGGACAAAGGTTTTaGAATAAGCCCAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFEGQRF*NKPKVI
Trigger: GATCACTTTGGGCTTATTTCAAAACCTTTGTCCCTC...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCATGGGGTACACCTGGGTaGCTTCAGTGTCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GRKAWAFLRLYFPRKITAWGTPG*LQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCA...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTTGGGGTACACCTGGGTaGCTTCAGTGTCCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIWGTPG*LQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCA...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCACTGAAATGTGAGAGTTaGCTGGTCTCGAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: VKGSRIQGPPASSSWISALKCES*LVSREK
Trigger: TTTTTCCCTCGAGACCAGCCAACTCTCACATTTCAG...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGCATTTCCATCCCATCTaGGGCTGTACGGATAATTTT +
Preference number: 4 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMHFHPI*GCTDNF
Trigger: AAAATTATCCGTACAGCCCCAGATGGGATGGAAATG...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGTTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTCTTGTAAATCACCACTaGAACTTAGTCCGATCGGTA +
Preference number: 4 (lower is better)
Translates to: KRCREDIPGGFQEAAVCALVNHH*NLVRSV
Trigger: TACCGATCGGACTAAGTTCCAGTGGTGATTTACAAG...AGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR CCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCGATGTCAGGCAGAGCTaGATTCCTCCCCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTDVRQS*IPPHLC
Trigger: ACAGAGATGGGGAGGAATCCAGCTCTGCCTGACATC...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAAAGATTCTGCAAAGCTaGGGGGTCTGGCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKKILQS*GVWQEF
Trigger: GAATTCCTGCCAGACCCCTCAGCTTTGCAGAATCTT...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTCTACATTGGAATTGGTaGTATTGTTGCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCLHWNW*YCCTSS
Trigger: GGAACTTGTGCAACAATATCACCAATTCCAATGTAG...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACACTTCATTTACATCCTTaGGAAGGTATGTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTLHLHP*EGMWGY
Trigger: ATATCCCCACATACCTTCTCAAGGATGTAAATGAAG...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTGGAAAAGCTGGGATATaGAGAGCTGAGGAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIIGKAGI*RAEEPP
Trigger: TGGAGGCTCCTCAGCTCTTCATATCCCAGCTTTTCC...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGAGGGACAAAGGTTTTaGAATAAGCCCTATGCAATT +
Preference number: 4 (lower is better)
Translates to: RMWTGSLAGHLSRLVFPREGQRF*NKPYAI
Trigger: AATTGCATAGGGCTTATTTCAAAACCTTTGTCCCTC...TCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR GCA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCACCAGCATATGGTATGTaGAGTTTAAATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VKGSRIQGPPASSSWISAPAYGM*SLNRSQ
Trigger: CTGTGACCGATTTAAACTGCACATACCATATGCTGG...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCCCAGCATATGGTATGTaGAGTTTAAATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASPAYGM*SLNRSQ
Trigger: CTGTGACCGATTTAAACTGCACATACCATATGCTGG...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp GAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATTTTTGTAAAGCCTTCTaGATCATATTCCACGACACC +
Preference number: 4 (lower is better)
Translates to: EQNAAVKTFQAASRKRLYFCKAF*IIFHDT
Trigger: GGTGTCGTGGAATATGATGCAGAAGGCTTTACAAAA...ATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp GCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACATCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AAVKTFQAASRKRLYVLTSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...TGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGTCCAAGGAGGCCCTCTaGAGCTTGGCCAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWSKEAL*SLASSS
Trigger: AGAGGAACTGGCCAAGCTCCAGAGGGCCTCCTTGGA...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTAAGATTCTGCAAAGCTaGGGGGTCTGGCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIIKILQS*GVWQEF
Trigger: GAATTCCTGCCAGACCCCTCAGCTTTGCAGAATCTT...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GAAGTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCACAAAAGGAAACGAGCTaGAAATTCACCAGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EVKGSRIQGPPASSSWISQKETS*KFTSPV
Trigger: AACTGGACTGGTGAATTTTCAGCTCGTTTCCTTTTG...TGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCCTTCATTTACATCCTTaGGAAGGTATGTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASLHLHP*EGMWGY
Trigger: ATATCCCCACATACCTTCTCAAGGATGTAAATGAAG...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAGAGGAACGTAATCAATaGGACATCCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKEERNQ*DILLLE
Trigger: TTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTC...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCAGAGGAACGTAATCAATaGGACATCCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRKAWAFLRLYFPRKITAEERNQ*DILLLE
Trigger: TTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTC...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIIAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGCGGCTGTATGTGCTaGCACGCATGTGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RKNSEGHLILELKRSQRQSGCMC*HACGQA
Trigger: TGCCTGTCCACATGCGTGTCAGCACATACAGCCGCT...TTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTTCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGGTTGCTCTCTCTTTTTaGTCTTTTGGCCATTTCATT +
Preference number: 4 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWVALSF*SFGHFI
Trigger: AATGAAATGGCCAAAAGAGCAAAAAGAGAGAGCAAC...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGCCAGCCAGCTCAAGTTaGATTTCAGCAGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWPASSS*ISAVGA
Trigger: AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGG...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTTTTGGAAGAAAGGCGTaGGCATTCCTGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIFGRKA*AFLRLY
Trigger: GTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTATGCTCAATTCGAGGTaGCAAGTACAGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIIMLNSR*QVQLGV
Trigger: TACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAT...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTGAGGAACGTAATCAATaGGACATCCTCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GVGIPEALLSPENYCTIIEERNQ*DILLLE
Trigger: TTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTC...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGACTGCACCTTGTTGGTaGGCAGGTGGCATACTTGAG +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWTAPCW*AGGILE
Trigger: CTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGT...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCACACCTGTGCCAAAGTaGCTGAGAAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTTPVPK*LRKAAI
Trigger: TATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGT...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAACACCTGTGCCAAAGTaGCTGAGAAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPTPVPK*LRKAAI
Trigger: TATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGT...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTCTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITLSIGK*CLLELR
Trigger: CCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAG...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGTGGGATATGAAGAGCTaGGGAGCCTCCAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQWDMKS*GASKCM
Trigger: CATGCACTTGGAGGCTCCTCAGCTCTTCATATCCCA...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGAAACGGACTGAAATGTaGGAGTTGGCTGGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWKRTEM*ELAGLE
Trigger: CTCGAGACCAGCCAACTCTCACATTTCAGTCCGTTT...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AAATGCTGCCTCCTGGAACTGAGGGACAAAGGTTTTGAAATAAGCCCTATGCAAGCTGCCTCCTGGAACTaGGGGACAAAGGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: KCCLLELRDKGFEISPMQAASWN*GTKVLK
Trigger: TTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGC...TTGCATAGGGCTTATTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGGCAAAAGCTGCTGTGTaGGCAAAACGCTGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQAKAAV*AKRCRE
Trigger: TTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGC...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCAAGTGATCAAAATTACTaGGCAGTTCTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPSDQNY*AVLSPS
Trigger: AGAGGGAGAGAGAACTGCTCAGTAATTTTGATCACT...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR TCA 90 bp GAAGTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGAAATAAGCCCAAAGTaGTCAAAATTACTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EVKGSRIQGPPASSSWISEISPK*SKLLSS
Trigger: ACTGCTCAGTAATTTTGATCACTTTGGGCTTATTTC...TGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR GCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCACCAGCATATGGTATGTaGAGTTTAAATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPPAYGM*SLNRSQ
Trigger: CTGTGACCGATTTAAACTGCACATACCATATGCTGG...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGCTTTCCATTGGCAAATaGTGCCTCCTGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWLSIGK*CLLELR
Trigger: CCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAG...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACTTGTAAATCACCACTaGAACTTAGTCCGATCGGTA +
Preference number: 4 (lower is better)
Translates to: GRKAWAFLRLYFPRKITALVNHH*NLVRSV
Trigger: TACCGATCGGACTAAGTTCCAGTGGTGATTTACAAG...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAAACGGACTGAAATGTaGGAGTTGGCTGGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQKRTEM*ELAGLE
Trigger: CTCGAGACCAGCCAACTCTCACATTTCAGTCCGTTT...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAATTTTGTAAAGCCTTCTaGATCATATTCCACGACACC +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKFCKAF*IIFHDT
Trigger: GGTGTCGTGGAATATGATGCAGAAGGCTTTACAAAA...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATTTATCTCTTGCTTCTaGAACTTAGTCCGATCGGTA +
Preference number: 4 (lower is better)
Translates to: RKAWAFLRLYFPRKITAPFISCF*NLVRSV
Trigger: TACCGATCGGACTAAGTTCCAGAAGCAAGAGATAAA...TGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR CCA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTAATGTGAGAGTTGGCTaGTCTCGAGGGAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITNVRVG*SRGKNR
Trigger: TCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATT...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AAATGCTGCCTCCTGGAACTGAGGGACAAAGGTTTTGAAATAAGCCCTATGCAAAAGCCCTATGCAATTTaGAGAGGATGCCTGGATGTC +
Preference number: 4 (lower is better)
Translates to: KCCLLELRDKGFEISPMQKPYAI*RGCLDV
Trigger: GACATCCAGGCATCCTCTCCAAATTGCATAGGGCTT...TTGCATAGGGCTTATTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGATGTGGGGATATTGCTaGAATCTACGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQMWGYC*NLRAAS
Trigger: TGAAGCTGCCCGTAGATTTCAGCAATATCCCCACAT...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGATGCTCAATTCGAGGTaGCAAGTACAGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQMLNSR*QVQLGV
Trigger: TACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAT...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTTGGGATATGAAGAGCTaGGGAGCCTCCAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFWDMKS*GASKCM
Trigger: CATGCACTTGGAGGCTCCTCAGCTCTTCATATCCCA...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAATCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCTCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KKGVGIPEALLSPENYCTSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGTCCTCCAGTAATGTCTaGTATTCAAACATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWSSSNV*YSNMRR
Trigger: CCGCCTCATGTTTGAATACCAGACATTACTGGAGGA...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTCTACATTGGAATTGGTaGTATTGTTGCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITLHWNW*YCCTSS
Trigger: GGAACTTGTGCAACAATATCACCAATTCCAATGTAG...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp TTTCAGAGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGACACCTGTGCCAAAGTaGCTGAGAAAAGCAGCAATA +
Preference number: 4 (lower is better)
Translates to: FQRKNSEGHLILELKRSQTPVPK*LRKAAI
Trigger: TATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGT...CTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGGGGGACATTTTAACTTaGCTTGTAAATCACCACTGG +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWGDILT*LVNHHW
Trigger: CCAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCC...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR GCA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAATATTACTTTATCTCTTaGTTCTGGAACTTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKYYFIS*FWNLVR
Trigger: TCGGACTAAGTTCCAGAAGCAAGAGATAAAGTAATA...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR GCA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTTATTACTTTATCTCTTaGTTCTGGAACTTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIYYFIS*FWNLVR
Trigger: TCGGACTAAGTTCCAGAAGCAAGAGATAAAGTAATA...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR GCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTCTTGCAGCCAGTTTTTaGAACTGCAAAGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFLAASF*NCKGQD
Trigger: GTCCTGGCCTTTGCAGTTGCAAAAACTGGCTGCAAG...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CCA 90 bp AGGAAGAACAGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAATGTGAGAGTTGGCTaGTCTCGAGGGAAAAACAGA +
Preference number: 4 (lower is better)
Translates to: RKNSEGHLILELKRSQRQNVRVG*SRGKNR
Trigger: TCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATT...TTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCTGTTCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGCTTGTAAATCACCACTaGAACTTAGTCCGATCGGTA +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWLVNHH*NLVRSV
Trigger: TACCGATCGGACTAAGTTCCAGTGGTGATTTACAAG...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
CDS-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGCTTCATTTACATCCTTaGGAAGGTATGTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWLHLHP*EGMWGY
Trigger: ATATCCCCACATACCTTCTCAAGGATGTAAATGAAG...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGGGGGACATTTTAACTTaGCTTGTAAATCACCACTAT +
Preference number: 4 (lower is better)
Translates to: SEGHLILELKRSQRQRLWGDILT*LVNHHY
Trigger: ATAGTGGTGATTTACAAGTCAAGTTAAAATGTCCCC...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACT +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFLCQSD*EKQQYT
Trigger: AGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAG...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR TCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTGAGGGACAAAGGTTTTaGAATAAGCCTTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFEGQRF*NKPLLF
Trigger: AAAGAGCAAAGGCTTATTTCAAAACCTTTGTCCCTC...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379624.6
CDS-3UTR GCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTTCCCCGGAAAATTACTaGACCATAATTTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFSPENY*TIICEF
Trigger: AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGA...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR GCA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTGTTGCTCTCTCTTTTTaGTCTTTTGGCCATTTCATT +
Preference number: 4 (lower is better)
Translates to: IPEALLSPENYCTIICEFVALSF*SFGHFI
Trigger: AATGAAATGGCCAAAAGAGCAAAAAGAGAGAGCAAC...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: QGPPASSSWISAVGAAWGTSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RCREDIPGGFQEAAVCADGDKYS*GYTWVA
Trigger: AGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACC...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCACGTACTGCACCTTGTaGGTGAGCAGGTGGCATACT +
Preference number: 5 (lower is better)
Translates to: QGPPASSSWISAVGAAWGTYCTL*VSRWHT
Trigger: AGTATGCCACCTGCTCACCAACAAGGTGCAGTACGT...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGATCACGTACTGCACCTaGTTGGTGAGCAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: GPPASSSWISAVGAAWGVITYCT*LVSRWH
Trigger: ATGCCACCTGCTCACCAACAAGGTGCAGTACGTGAT...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCCCGGAGGCGGCTACATaGGAATTGGTGATATTGTTG +
Preference number: 5 (lower is better)
Translates to: QGPPASSSWISAVGAAWGPEAAT*ELVILL
Trigger: CAACAATATCACCAATTCCAATGTAGCCGCCTCCGG...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GPPASSSWISAVGAAWGVRYVGI*LKSTGS
Trigger: GCTGCCCGTAGATTTCAGCAATATCCCCACATACCT...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWGDKYS*GYTWVA
Trigger: AGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACC...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp TTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACAGGCACGTACTGCACCTTGTaGGTGAGCAGGTGGCATACT +
Preference number: 5 (lower is better)
Translates to: FQAASRKRLYVLTRMWTGTYCTL*VSRWHT
Trigger: AGTATGCCACCTGCTCACCAACAAGGTGCAGTACGT...GCCTGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVTSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGCAAAGGCATCTCTGCTCCCTaGGCATCCCTTTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: HQPAQVGFQQSGLPGACKGISAP*ASLCSF
Trigger: AAAAGAGCAAAGGGATGCCAAGGGAGCAGAGATGCC...TTTGCACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CAA 90 bp CGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACCCGGAGGCGGCTACATaGGAATTGGTGATATTGTTG +
Preference number: 5 (lower is better)
Translates to: RCREDIPGGFQEAAVCADPEAAT*ELVILL
Trigger: CAACAATATCACCAATTCCAATGTAGCCGCCTCCGG...GTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLRYVGI*LKSTGS
Trigger: GCTGCCCGTAGATTTCAGCAATATCCCCACATACCT...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: QKLLCEQNAAVKTFQAASTSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...GGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGTGGGGCTGGAGCAGCTaGCAGCCAGTTTTTGCAACT +
Preference number: 5 (lower is better)
Translates to: ACGQAVWLATSQDWCFLEWGWSS*QPVFAT
Trigger: AGTTGCAAAAACTGGCTGCAAGCTGCTCCAGCCCCA...CTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CAA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGACGTACTGCACCTTGTaGGTGAGCAGGTGGCATACT +
Preference number: 5 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMTYCTL*VSRWHT
Trigger: AGTATGCCACCTGCTCACCAACAAGGTGCAGTACGT...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp ACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTATCACGTACTGCACCTaGTTGGTGAGCAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: TRMWTGSLAGHLSRLVFPITYCT*LVSRWH
Trigger: ATGCCACCTGCTCACCAACAAGGTGCAGTACGTGAT...AGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTATCACGTACTGCACCTaGTTGGTGAGCAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LTRMWTGSLAGHLSRLVFITYCT*LVSRWH
Trigger: ATGCCACCTGCTCACCAACAAGGTGCAGTACGTGAT...AAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGGCTTGCAGCCAGTTTTaGCAACTGCAAAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: KTFQAASRKRLYVLTRMWACSQF*QLQRPG
Trigger: TCCTGGCCTTTGCAGTTGCAAAAACTGGCTGCAAGC...CCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CAA 90 bp CAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCTTGGAATTGGTGATATaGTTGCACAAGTTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: QGPPASSSWISAVGAAWGLELVI*LHKFLH
Trigger: GTGAAGGAACTTGTGCAACAATATCACCAATTCCAA...GCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGCCGGAGGCGGCTACATaGGAATTGGTGATATTGTTG +
Preference number: 5 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVPEAAT*ELVILL
Trigger: CAACAATATCACCAATTCCAATGTAGCCGCCTCCGG...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMRYVGI*LKSTGS
Trigger: GCTGCCCGTAGATTTCAGCAATATCCCCACATACCT...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp TCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRIQGPPASSSWISAVGARYVGI*LKSTGS
Trigger: GCTGCCCGTAGATTTCAGCAATATCCCCACATACCT...AGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RMWTGSLAGHLSRLVFPRRYVGI*LKSTGS
Trigger: GCTGCCCGTAGATTTCAGCAATATCCCCACATACCT...TCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GCTGACACGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAG +
Preference number: 5 (lower is better)
Translates to: ADTHVDRQSGWPPLKTGVEQVAY*RNVINE
Trigger: CTCATTGATTACGTTCCTCAAGTATGCCACCTGCTC...AACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCGTGTCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTATCACGTACTGCACCTaGTTGGTGAGCAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAAITYCT*LVSRWH
Trigger: ATGCCACCTGCTCACCAACAAGGTGCAGTACGTGAT...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAATCACGTACTGCACCTaGTTGGTGAGCAGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VKGSRIQGPPASSSWISAITYCT*LVSRWH
Trigger: ATGCCACCTGCTCACCAACAAGGTGCAGTACGTGAT...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGCATCCCTTTGCTCTTTaGGCCATTTCATTTCCATCC +
Preference number: 5 (lower is better)
Translates to: DPGTTSQLKLDFSSRGCLHPFAL*AISFPS
Trigger: GGATGGAAATGAAATGGCCAAAAGAGCAAAGGGATG...CAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS-3UTR CAA 90 bp GGACCACCAGCCAGCTCAAGTTGGATTTCAGCAGTCGGGGCTGCCTGGGGCGTGTGTTGCTCTCTCTTTTaGCTCTTTTGGCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: GPPASSSWISAVGAAWGVCCSLF*LFWPFH
Trigger: ATGAAATGGCCAAAAGAGCAAAAAGAGAGAGCAACA...CACGCCCCAGGCAGCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGCAAAAGCTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTCCGGAGGCGGCTACATaGGAATTGGTGATATTGTTG +
Preference number: 5 (lower is better)
Translates to: VQKLLCEQNAAVKTFQAAPEAAT*ELVILL
Trigger: CAACAATATCACCAATTCCAATGTAGCCGCCTCCGG...AGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAGCTTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCAGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GRKAWAFLRLYFPRKITAGDKYS*GYTWVA
Trigger: AGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACC...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KKGVGIPEALLSPENYCTGDKYS*GYTWVA
Trigger: AGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACC...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAG +
Preference number: 5 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVEQVAY*RNVINE
Trigger: CTCATTGATTACGTTCCTCAAGTATGCCACCTGCTC...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAG +
Preference number: 5 (lower is better)
Translates to: ACGQAVWLATSQDWCFLEEQVAY*RNVINE
Trigger: CTCATTGATTACGTTCCTCAAGTATGCCACCTGCTC...CTCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CGCATGTGGACAGGCAGTCTGGCTGGCCACCTCTCAAGACTGGTGTTTCCTAGAGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAG +
Preference number: 5 (lower is better)
Translates to: RMWTGSLAGHLSRLVFPREQVAY*RNVINE
Trigger: CTCATTGATTACGTTCCTCAAGTATGCCACCTGCTC...TCTAGGAAACACCAGTCTTGAGAGGTGGCCAGCCAGACTGCCTGTCCACATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344773.6
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKITSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp ACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGGACATCCCTTGGCATCCCTTaGCTCTTTTGGCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: TFQAASRKRLYVLTRMWTSLGIP*LFWPFH
Trigger: ATGAAATGGCCAAAAGAGCAAAGGGATGCCAAGGGA...TGTCCACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS TCA 90 bp TCTCTCCATACTGTGGCTCCTCCAGTAATGTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGAGGCGGCTACATTGGAATTGGTGAT +
Preference number: 5 (lower is better)
Translates to: SLHTVAPPVMSGIQT*GGSSPGGGYIGIGD
Trigger: ATCACCAATTCCAATGTAGCCGCCTCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGACATTACTGGAGGAGCCACAGTATGGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CCA 90 bp AGTGCATGCTCAATTCGAGGTGACAAGTACAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCAAAACTAACAGAGAGGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: SACSIRGDKYSLGYT*VASVSSKLTERRAT
Trigger: TGTGGCCCTCCTCTCTGTTAGTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCATGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGGCGGCTACATTGGAATaGGTGATATTGTTGCACAAG +
Preference number: 5 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMAATLE*VILLHK
Trigger: CTTGTGCAACAATATCACCAATTCCAATGTAGCCGC...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCGGCTACATTGGAATaGGTGATATTGTTGCACAAG +
Preference number: 5 (lower is better)
Translates to: AKRCREDIPGGFQEAAVCAATLE*VILLHK
Trigger: CTTGTGCAACAATATCACCAATTCCAATGTAGCCGC...ACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTACCAGCCAGCTCAAGTaGGATTTCAGCAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: GVGIPEALLSPENYCTIITSQLK*DFSSRG
Trigger: GCCCCGACTGCTGAAATCCAACTTGAGCTGGCTGGT...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS TCA 90 bp GGCCTGACTAACCCACTAAGTGGCTGGGGAAGAATTATGAGGAGATaGAAGGGACCACTTGGCACTGATACTTCTGATCCCCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: GLTNPLSGWGRIMRR*KGPLGTDTSDPQSG
Trigger: ACCACTCTGGGGATCAGAAGTATCAGTGCCAAGTGGTCCCTTTCATCTCCTCATAATTCTTCCCCAGCCACTTAGTGGGTTAGTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS CCA 90 bp CTTAACTGCTCAATTCGAGGTGACAAGTACAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCAAAACTAACAGAGAGGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LNCSIRGDKYSLGYT*VASVSSKLTERRAT
Trigger: TGTGGCCCTCCTCTCTGTTAGTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS-3UTR CAA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGGAATTGGTGATATTGTaGCACAAGTTCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMELVIL*HKFLHH
Trigger: GTGGTGAAGGAACTTGTGCAACAATATCACCAATTC...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGTTGGAATTGGTGATATaGTTGCACAAGTTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: NAAVKTFQAASRKRLYVLLELVI*LHKFLH
Trigger: GTGAAGGAACTTGTGCAACAATATCACCAATTCCAA...CAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTCTTTTGTGATACCCTaGAATCACGTACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: VKTFQAASRKRLYVLTRMSFVIP*NHVLHL
Trigger: AAGGTGCAGTACGTGATTCAAGGGTATCACAAAAGA...CATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTGACACGCATGTGTTGGAATTGGTGATATaGTTGCACAAGTTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: EDIPGGFQEAAVCADTHVLELVI*LHKFLH
Trigger: GTGAAGGAACTTGTGCAACAATATCACCAATTCCAA...CACATGCGTGTCAGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTCCGGAGGCGGCTACATaGGAATTGGTGATATTGTTG +
Preference number: 5 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKIPEAAT*ELVILL
Trigger: CAACAATATCACCAATTCCAATGTAGCCGCCTCCGG...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTTCTTCATTTACATCCTaGAGAAGGTATGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: KRCREDIPGGFQEAAVCASSFTS*RRYVGI
Trigger: TATCCCCACATACCTTCTCAAGGATGTAAATGAAGA...AGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AGCGAGGGGCATTTAATCTTAGAACTTAAGAGGTCTCAGAGACAAAGGCTTTGGGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SEGHLILELKRSQRQRLWGDKYS*GYTWVA
Trigger: AGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACC...CCAAAGCCTTTGTCTCTGAGACCTCTTAAGTTCTAAGATTAAATGCCCCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCATCTTTTGTGATACCCTaGAATCACGTACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: VKGSRIQGPPASSSWISASFVIP*NHVLHL
Trigger: AAGGTGCAGTACGTGATTCAAGGGTATCACAAAAGA...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGCGGCTGTATGTGCTTGTTGCTCTCTCTTTTaGCTCTTTTGGCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: KRCREDIPGGFQEAAVCACCSLF*LFWPFH
Trigger: ATGAAATGGCCAAAAGAGCAAAAAGAGAGAGCAACA...AGCACATACAGCCGCTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS TCA 90 bp AACATGAGGCGGGAGCTCTCCCGGAGGCGGCTACATTGGAATTGGTaGTATTGTTGCACAAGTTCCTTCACCACAAGTAAGAGACATTCA +
Preference number: 5 (lower is better)
Translates to: NMRRELSRRRLHWNW*YCCTSSFTTSKRHS
Trigger: TGAATGTCTCTTACTTGTGGTGAAGGAACTTGTGCAACAATATCACCAATTCCAATGTAGCCGCCTCCGGGAGAGCTCCCGCCTCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CCA 90 bp GACAAAGGTTTTGAAATAAGCCCTATGCAATTTGGAGAGGATGCCTaGATGTCAGGCAGAGCTGGATTCCTCCCCATCTCTGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: DKGFEISPMQFGEDA*MSGRAGFLPISVAL
Trigger: GAGAGCAACAGAGATGGGGAGGAATCCAGCTCTGCCTGACATCCAGGCATCCTCTCCAAATTGCATAGGGCTTATTTCAAAACCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361704.6
ENST00000379632.6
CDS-3UTR CAA 90 bp CTGCTGTGTGAGCAAAACGCTGCCGTGAAGACATTCCAGGCGGCTTCCAGGAAGTTATTACTTTATCTCTaGCTTCTGGAACTTAGTCCG +
Preference number: 5 (lower is better)
Translates to: LLCEQNAAVKTFQAASRKLLLYL*LLELSP
Trigger: CGGACTAAGTTCCAGAAGCAAGAGATAAAGTAATAA...CTTCCTGGAAGCCGCCTGGAATGTCTTCACGGCAGCGTTTTGCTCACACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCAGCATCTTCATTTACATCCTaGAGAAGGTATGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: VKGSRIQGPPASSSWISASSFTS*RRYVGI
Trigger: TATCCCCACATACCTTCTCAAGGATGTAAATGAAGA...TGCTGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTACGTACTGCACCTTGTaGGTGAGCAGGTGGCATACT +
Preference number: 5 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITTYCTL*VSRWHT
Trigger: AGTATGCCACCTGCTCACCAACAAGGTGCAGTACGT...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GAAGTGAAGGGCTCTAGGATCCAGGGACCACCAGCCAGCTCAAGTTGGATTTCATCTTTTGTGATACCCTaGAATCACGTACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: EVKGSRIQGPPASSSWISSFVIP*NHVLHL
Trigger: AAGGTGCAGTACGTGATTCAAGGGTATCACAAAAGA...TGAAATCCAACTTGAGCTGGCTGGTGGTCCCTGGATCCTAGAGCCCTTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCGCGGCTACATTGGAATaGGTGATATTGTTGCACAAG +
Preference number: 5 (lower is better)
Translates to: KKGVGIPEALLSPENYCTAATLE*VILLHK
Trigger: CTTGTGCAACAATATCACCAATTCCAATGTAGCCGC...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GACAAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGTCTTCATTTACATCCTaGAGAAGGTATGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: DKGFGRKAWAFLRLYFPRSSFTS*RRYVGI
Trigger: TATCCCCACATACCTTCTCAAGGATGTAAATGAAGA...CCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAG +
Preference number: 5 (lower is better)
Translates to: GVGIPEALLSPENYCTIIEQVAY*RNVINE
Trigger: CTCATTGATTACGTTCCTCAAGTATGCCACCTGCTC...AATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS GCA 90 bp ACCTCTCAAGACTGGTGTTTCCTAGAGCTTTCCATTGGCAAATGCTaGCTCCTGGAACTGAGGGACAAAGGTTTTGAAATAAGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: TSQDWCFLELSIGKC*LLELRDKGFEISLC
Trigger: GCAAAGGCTTATTTCAAAACCTTTGTCCCTCAGTTCCAGGAGGCAGCATTTGCCAATGGAAAGCTCTAGGAAACACCAGTCTTGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379624.6
CDS-3UTR CAA 90 bp GGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCAGAATTGGTGATATTGTaGCACAAGTTCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: GRKAWAFLRLYFPRKITAELVIL*HKFLHH
Trigger: GTGGTGAAGGAACTTGTGCAACAATATCACCAATTC...TGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTTCTTTTGTGATACCCTaGAATCACGTACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKISFVIP*NHVLHL
Trigger: AAGGTGCAGTACGTGATTCAAGGGTATCACAAAAGA...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp GGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTTTGGAATTGGTGATATaGTTGCACAAGTTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GFGRKAWAFLRLYFPRKILELVI*LHKFLH
Trigger: GTGAAGGAACTTGTGCAACAATATCACCAATTCCAA...AATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAAGGCTTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAATCTTCATTTACATCCTaGAGAAGGTATGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: KGFGRKAWAFLRLYFPRKSSFTS*RRYVGI
Trigger: TATCCCCACATACCTTCTCAAGGATGTAAATGAAGA...TTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp AAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCTCTTCATTTACATCCTaGAGAAGGTATGTGGGGATA +
Preference number: 5 (lower is better)
Translates to: KKGVGIPEALLSPENYCTSSFTS*RRYVGI
Trigger: TATCCCCACATACCTTCTCAAGGATGTAAATGAAGA...GGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTACGTACTGCACCTTGTaGGTGAGCAGGTGGCATACT +
Preference number: 5 (lower is better)
Translates to: IPEALLSPENYCTIICEFTYCTL*VSRWHT
Trigger: AGTATGCCACCTGCTCACCAACAAGGTGCAGTACGT...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS-3UTR CAA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTTTATTACTTTATCTCTaGCTTCTGGAACTTAGTCCG +
Preference number: 5 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITLLLYL*LLELSP
Trigger: CGGACTAAGTTCCAGAAGCAAGAGATAAAGTAATAA...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR CAA 90 bp TTTGGAAGAAAGGCGTGGGCATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTCACTATATTACCGAATaGTTCTTCTGTGTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: FGRKAWAFLRLYFPRKITHYITE*FFCVFP
Trigger: GGGAAAAACACAGAAGAACAATTCGGTAATATAGTG...AGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAATGCCCACGCCTTTCTTCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342045.6
ENST00000379632.6
CDS-3UTR CAA 90 bp ATTCCTGAGGCTTTACTTTCCCCGGAAAATTACTGCACCATAATTTGTGAGTTTGCGGCTACATTGGAATaGGTGATATTGTTGCACAAG +
Preference number: 5 (lower is better)
Translates to: IPEALLSPENYCTIICEFAATLE*VILLHK
Trigger: CTTGTGCAACAATATCACCAATTCCAATGTAGCCGC...AAACTCACAAATTATGGTGCAGTAATTTTCCGGGGAAAGTAAAGCCTCAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS TCA 90 bp AATTTTTATGAGTCTGGTAAGGAAGGGCTGTCATTAGGTAAAGGTTaGATTGGTTCTGGTACATTGACTGAATTCATTCTGGTACATACC +
Preference number: 5 (lower is better)
Translates to: NFYESGKEGLSLGKG*IGSGTLTEFILVHT
Trigger: GGTATGTACCAGAATGAATTCAGTCAATGTACCAGAACCAATTCAACCTTTACCTAATGACAGCCCTTCCTTACCAGACTCATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492702.1
CDS GCA 90 bp AATTTCTGTGCATGCCTATTTAACCACAACGTATTCCCTGCCAACTaGCTTACTTTTAATCAAACTAGAATTGAATGGCAGATAAGAAAA +
Preference number: 5 (lower is better)
Translates to: NFCACLFNHNVFPAN*LTFNQTRIEWQIRK
Trigger: TTTTCTTATCTGCCATTCAATTCTAGTTTGATTAAAAGTAAGGCAGTTGGCAGGGAATACGTTGTGGTTAAATAGGCATGCACAGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496951.1
CDS GCA 72 bp TTACTCAGTCTGCGGCTCGGGGGAGGAGGCGTGCCGTaGGCTATGCGCCCAGTGGAGCTTTTGGGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: LLSLRLGGGGVP*AMRPVELLGAG
Trigger: CCCAGCGCCCAAAAGCTCCACTGGGCGCATAGCGCACGGCACGCCTCCTCCCCCGAGCCGCAGACTGAGTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436924.5
CDS GCA 72 bp GCCAGTTACTCAGTCTGCGGCTCGGGGGAGGAGGCGTaGCGTGCGCTATGCGCCCAGTGGAGCTTTTGGGCG +
Preference number: 6 (lower is better)
Translates to: ASYSVCGSGEEA*RALCAQWSFWA
Trigger: CGCCCAAAAGCTCCACTGGGCGCATAGCGCACGGCACGCCTCCTCCCCCGAGCCGCAGACTGAGTAACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436924.5
CDS CAA 72 bp CTCAAAGCGCTCCCCAAAGACCTGCCCTCCAAAGACTaGCGCCCCCAAAGACCTTTCTTGGCCCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LKALPKDLPSKD*RPQRPFLARLL
Trigger: CAGCAGCCGGGCCAAGAAAGGTCTTTGGGGGCGCAAGTCTTTGGAGGGCAGGTCTTTGGGGAGCGCTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436924.5
CDS GCA 72 bp TGGAGCTTGGCCAGTTCCTCTGGGGCTGGAGCAGCTTaGAGCCAGTTTTTGCAACTGCAAAGGCCAGGACTT +
Preference number: 6 (lower is better)
Translates to: WSLASSSGAGAA*SQFLQLQRPGL
Trigger: AAGTCCTGGCCTTTGCAGTTGCAAAAACTGGCTGCAAGCTGCTCCAGCCCCAGAGGAACTGGCCAAGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344773.6
CDS TCA 72 bp ACTGTGGCTCCTCCAGTAATGTCTGGTATTCAAACATaGGGCGGGAGCTCTCCCGGAGGCGGCTACATTGGA +
Preference number: 6 (lower is better)
Translates to: TVAPPVMSGIQT*GGSSPGGGYIG
Trigger: TCCAATGTAGCCGCCTCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGACATTACTGGAGGAGCCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CAA 72 bp GAGGCGGGAGCTCTCCCGGAGGCGGCTACATTGGAATaGGTGATATTGTTGCACAAGTTCCTTCACCACAAG +
Preference number: 6 (lower is better)
Translates to: EAGALPEAATLE*VILLHKFLHHK
Trigger: CTTGTGGTGAAGGAACTTGTGCAACAATATCACCAATTCCAATGTAGCCGCCTCCGGGAGAGCTCCCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CCA 72 bp ATGTTCTCTCCATACTGTGGCTCCTCCAGTAATGTCTaGTATTCAAACATGAGGCGGGAGCTCTCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: MFSPYCGSSSNV*YSNMRRELSRR
Trigger: CCTCCGGGAGAGCTCCCGCCTCATGTTTGAATACCAGACATTACTGGAGGAGCCACAGTATGGAGAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000603461.1
ENST00000604932.1
CDS CAA 90 bp GAGGAGCCTCCAAGTGCATGCTCAATTCGAGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAACTAACAGAG +
Preference number: 6 (lower is better)
Translates to: EEPPSACSIRGDKYS*GYTWVASVSSKLTE
Trigger: CTCTGTTAGTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCATGCACTTGGAGGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS CAA 90 bp CAAGGGCTCAGGCTTAACTGCTCAATTCGAGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAACTAACAGAG +
Preference number: 6 (lower is better)
Translates to: QGLRLNCSIRGDKYS*GYTWVASVSSKLTE
Trigger: CTCTGTTAGTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAGTTAAGCCTGAGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS TCA 72 bp CGGGAGCTCTCCCGGAGGCGGCTACATTGGAATTGGTaGTATTGTTGCACAAGTTCCTTCACCACAAGTAAG +
Preference number: 6 (lower is better)
Translates to: RELSRRRLHWNW*YCCTSSFTTSK
Trigger: CTTACTTGTGGTGAAGGAACTTGTGCAACAATATCACCAATTCCAATGTAGCCGCCTCCGGGAGAGCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CCA 72 bp CAAGTGCATGCTCAATTCGAGGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAAC +
Preference number: 6 (lower is better)
Translates to: QVHAQFEVTSTA*GTPGWLQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCATGCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS CCA 72 bp GGCTTAACTGCTCAATTCGAGGTGACAAGTACAGCTTaGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAAC +
Preference number: 6 (lower is better)
Translates to: GLTAQFEVTSTA*GTPGWLQCPQN
Trigger: GTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAGTTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS CAA 72 bp CCAAGTGCATGCTCAATTCGAGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: PSACSIRGDKYS*GYTWVASVSSK
Trigger: TTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCATGCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS CAA 72 bp CACGTACTGCACCTTGTTGGTGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAGACATCCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: HVLHLVGEQVAY*RNVINETSSSW
Trigger: CCAGGAGGAGGATGTCTCATTGATTACGTTCCTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGTACGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS CAA 90 bp CCCTTGAATCACGTACTGCACCTTGTTGGTGAGCAGGTGGCATACTaGAGGAACGTAATCAATGAGACATCCTCCTCCTGGAAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: PLNHVLHLVGEQVAY*RNVINETSSSWKSW
Trigger: CCAGCTTTTCCAGGAGGAGGATGTCTCATTGATTACGTTCCTCAAGTATGCCACCTGCTCACCAACAAGGTGCAGTACGTGATTCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS CCA 72 bp TCAATTCGAGGTGACAAGTACAGCTTGGGGTACACCTaGGTGGCTTCAGTGTCCTCAAAACTAACAGAGAGG +
Preference number: 6 (lower is better)
Translates to: SIRGDKYSLGYT*VASVSSKLTER
Trigger: CCTCTCTGTTAGTTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
CDS CAA 72 bp AGGCTTAACTGCTCAATTCGAGGTGACAAGTACAGCTaGGGGTACACCTGGGTGGCTTCAGTGTCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: RLNCSIRGDKYS*GYTWVASVSSK
Trigger: TTTTGAGGACACTGAAGCCACCCAGGTGTACCCCAAGCTGTACTTGTCACCTCGAATTGAGCAGTTAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS TCA 72 bp AACCCACTAAGTGGCTGGGGAAGAATTATGAGGAGATaGAAGGGACCACTTGGCACTGATACTTCTGATCCC +
Preference number: 6 (lower is better)
Translates to: NPLSGWGRIMRR*KGPLGTDTSDP
Trigger: GGGATCAGAAGTATCAGTGCCAAGTGGTCCCTTTCATCTCCTCATAATTCTTCCCCAGCCACTTAGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379629.7
CDS CAA 90 bp ATTGTTGCACAAGTTCCTTCACCACAAGTAAGAGACATTCAGGATTaGAAGGATTCCAGGAGGCAAGATTCTGCAAAGCTGAGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: IVAQVPSPQVRDIQD*KDSRRQDSAKLRGL
Trigger: CAGACCCCTCAGCTTTGCAGAATCTTGCCTCCTGGAATCCTTCAAATCCTGAATGTCTCTTACTTGTGGTGAAGGAACTTGTGCAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6
ENST00000436924.5
ENST00000603461.1
ENST00000604932.1
CDS CAA 72 bp AAAAGCAGCAATATACTCTCTTCTTTTGTGATACCCTaGAATCACGTACTGCACCTTGTTGGTGAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: KSSNILSSFVIP*NHVLHLVGEQV
Trigger: CACCTGCTCACCAACAAGGTGCAGTACGTGATTCAAGGGTATCACAAAAGAAGAGAGTATATTGCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS TCA 72 bp CTGCATCATATTCCACGACACCTGTGCCAAAGTGACTaGGAAAAGCAGCAATATACTCTCTTCTTTTGTGAT +
Preference number: 6 (lower is better)
Translates to: LHHIPRHLCQSD*EKQQYTLFFCD
Trigger: ATCACAAAAGAAGAGAGTATATTGCTGCTTTTCTCAGTCACTTTGGCACAGGTGTCGTGGAATATGATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379632.6
CDS TCA 72 bp GAGTCTGGTAAGGAAGGGCTGTCATTAGGTAAAGGTTaGATTGGTTCTGGTACATTGACTGAATTCATTCTG +
Preference number: 6 (lower is better)
Translates to: ESGKEGLSLGKG*IGSGTLTEFIL
Trigger: CAGAATGAATTCAGTCAATGTACCAGAACCAATTCAACCTTTACCTAATGACAGCCCTTCCTTACCAGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492702.1
CDS CAA 72 bp TCTTCATTTACATCCTTGAGAAGGTATGTGGGGATATaGCTGAAATCTACGGGCAGCTTCAAAAGGAAACGA +
Preference number: 6 (lower is better)
Translates to: SSFTSLRRYVGI*LKSTGSFKRKR
Trigger: TCGTTTCCTTTTGAAGCTGCCCGTAGATTTCAGCAATATCCCCACATACCTTCTCAAGGATGTAAATGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342045.6
ENST00000344773.6
ENST00000361704.6
ENST00000379624.6
ENST00000379629.7
ENST00000379632.6