RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B9D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108641

Ensembl transcript IDs: ENST00000261499.10, ENST00000268841.10, ENST00000395616.7, ENST00000440841.1, ENST00000461069.6, ENST00000468679.4, ENST00000476298.2, ENST00000477478.7, ENST00000477683.5, ENST00000487415.6, ENST00000574508.7, ENST00000575478.7, ENST00000582857.2, ENST00000642870.2, ENST00000645021.1, ENST00000646248.1, ENST00000647056.1, ENST00000647252.1, ENST00000663089.1, ENST00000671102.1, ENST00000674596.1, ENST00000675510.1

Found 1216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCGGGAGGACACGTGCATCTCCAGGCAGCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGG +
Preference number: 1 (lower is better)
Translates to: RREDTCISRQQRWKR*SGHGKRQGRGRGGW
Trigger: CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp GCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTGGGACTGCCC +
Preference number: 1 (lower is better)
Translates to: ARPRQRRLGDPDGKG*RGLETSLEGGLGLP
Trigger: GGGCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp GTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTaGGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCT +
Preference number: 1 (lower is better)
Translates to: VPTGPWATVPRLRQG*GAKGPGLALIHLPA
Trigger: AGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp CTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTaGCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAG +
Preference number: 1 (lower is better)
Translates to: LLPELQACGWVLGSR*HLGKPVAGLVCRGK
Trigger: CTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 90 bp AGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGGGTTGGAGAGGCCTTGAGACGAGCC +
Preference number: 1 (lower is better)
Translates to: RCSGHGKRQGRGRGG*ETLMGRVGEALRRA
Trigger: GGCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp GGAGGACACGTGCATCTCCAGGCAGCAGAGGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGAC +
Preference number: 1 (lower is better)
Translates to: GGHVHLQAAEVEEVL*SREEARPRQRRLGD
Trigger: GTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTGCTGCCTGGAGATGCACGTGTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp AAACACAGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTaGGGGCTCAGGCAGGTGCAGGGCAGGCGAAGGAACAGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: KHRPGPWMEREPLWL*GLRQVQGRRRNSWL
Trigger: CAGCCAGCTGTTCCTTCGCCTGCCCTGCACCTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCTGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp CTAGGGAAACACAGACCTGGGCCATGGATGGAACGCGAGCCGTTGTaGCTCTGGGGGCTCAGGCAGGTGCAGGGCAGGCGAAGGAACAGC +
Preference number: 1 (lower is better)
Translates to: LGKHRPGPWMEREPL*LWGLRQVQGRRRNS
Trigger: GCTGTTCCTTCGCCTGCCCTGCACCTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCTGTGTTTCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp GCTCTGCTTCCAGAAGGGCCTGGACAACCTCAGAGGTCAGGGTGTTaGGCCAGGGGGCTCACCTTCCTCTCCTGCCAAGGGGCTGCCAGA +
Preference number: 1 (lower is better)
Translates to: ALLPEGPGQPQRSGC*ARGLTFLSCQGAAR
Trigger: TCTGGCAGCCCCTTGGCAGGAGAGGAAGGTGAGCCCCCTGGCTCAACACCCTGACCTCTGAGGTTGTCCAGGCCCTTCTGGAAGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp AAAGGCAGAAGAGGGTCGGCCCAGATGGTCTCAGGGCAAGTGCCATaGCGACAGTCCAGGGCAACATGGGCGAGGCTGGGAGGTGGGGGT +
Preference number: 1 (lower is better)
Translates to: KGRRGSAQMVSGQVP*RQSRATWARLGGGG
Trigger: ACCCCCACCTCCCAGCCTCGCCCATGTTGCCCTGGACTGTCGTCATGGCACTTGCCCTGAGACCATCTGGGCCGACCCTCTTCTGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 90 bp CACTGCCTGTCAGCTGAGGCAACAGAGGGAGGGAGTGCGTGGAGCTaGCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGC +
Preference number: 1 (lower is better)
Translates to: HCLSAEATEGGSAWS*PANCVFLRGRACWS
Trigger: GCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 90 bp GCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTaGACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGA +
Preference number: 1 (lower is better)
Translates to: AHCTDHEATGHCHAC*TCAIVLPPDGHRGG
Trigger: TCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 90 bp GAGTTCCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTaGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: EFLTSHLLPELQACG*VLGSRCHLGKPVAG
Trigger: ACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 90 bp GCTGATGGTTGGCGAAAAGGGGCTGGGCCAGGAGCTTGGAGGGCCTaGTGGTTTGAAGAGCACAGGGAAGCGCCACATGAGGGAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ADGWRKGAGPGAWRA*WFEEHREAPHEGGP
Trigger: AGGCCCTCCCTCATGTGGCGCTTCCCTGTGCTCTTCAAACCACCAGGCCCTCCAAGCTCCTGGCCCAGCCCCTTTTCGCCAACCATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp CGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTC +
Preference number: 1 (lower is better)
Translates to: RPLPRMLHLCHRAPS*WAPWWRKSPSCFSV
Trigger: GACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp AGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTaGATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCC +
Preference number: 1 (lower is better)
Translates to: RRQPPAPSSGTGHPE*MSLLPTALIMKPPA
Trigger: GGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR TCA 90 bp AAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTAGGGACTGGTGGCAGGGGGTGCCCG +
Preference number: 1 (lower is better)
Translates to: KCLAPGVHPRISRQA*LRARRLGTGGRGCP
Trigger: CGGGCACCCCCTGCCACCAGTCCCTAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 90 bp GCCTGTTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGG +
Preference number: 1 (lower is better)
Translates to: ACWSHWFLGGLLCNS*PTEGLCLRATNQTR
Trigger: CCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 90 bp TGGTCTGCAGTTATTGAGGCCACCAGCCTGGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCCCCTGAACCTCAGGGAAAGGGGGTG +
Preference number: 1 (lower is better)
Translates to: WSAVIEATSLVLVPA*AGHLVAPEPQGKGV
Trigger: CACCCCCTTTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACGCGGGCACTAGGACCAGGCTGGTGGCCTCAATAACTGCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 90 bp GCTGAGGCAACAGAGGGAGGGAGTGCGTGGAGCTGCCCAGCCAACTaGGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTA +
Preference number: 1 (lower is better)
Translates to: AEATEGGSAWSCPAN*VFLRGRACWSHWFL
Trigger: TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTCTGTTGCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 90 bp CATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTaGCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGG +
Preference number: 1 (lower is better)
Translates to: HVPVAHCTDHEATGH*HACCTCAIVLPPDG
Trigger: CCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp TGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTaGGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTG +
Preference number: 1 (lower is better)
Translates to: CLEFLTSHLLPELQA*GWVLGSRCHLGKPV
Trigger: CACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGAACTCTAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp GGAGGCCCAGGGTCAGGGCCTCCCAAAGTAATGCTGAAGGGGCTCTaGTTCCAGAAGGGCCTGGACAACCTCAGAGGTCAGGGTGTTGAG +
Preference number: 1 (lower is better)
Translates to: GGPGSGPPKVMLKGL*FQKGLDNLRGQGVE
Trigger: CTCAACACCCTGACCTCTGAGGTTGTCCAGGCCCTTCTGGAAGCAGAGCCCCTTCAGCATTACTTTGGGAGGCCCTGACCCTGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: YQRLCSLWSLHWGKL*GGLGPNTPCVSEGP
Trigger: TGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR CCA 90 bp CCCTTGATGTGGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTCCGGGGAGCTGTGATAGCTTCCCGG +
Preference number: 1 (lower is better)
Translates to: PLMWTKASALGEVRP*TEKTAFRGAVIASR
Trigger: CCGGGAAGCTATCACAGCTCCCCGGAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647056.1
3UTR CCA 90 bp CACCACAGGCTAGAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTaGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCATGGACAGAG +
Preference number: 1 (lower is better)
Translates to: HHRLEASGKLQVPLM*TKASALGEVRPWTE
Trigger: CTCTGTCCATGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTCTAGCCTGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR CCA 90 bp GCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCCACCAGCCTGGTCCTAGTGCCCGCG +
Preference number: 1 (lower is better)
Translates to: ATGEVGDEGADSCGA*SAVIEATSLVLVPA
Trigger: CGCGGGCACTAGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 90 bp GGAGAGATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTaGGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTC +
Preference number: 1 (lower is better)
Translates to: GEILNGLWAAGTCRL*VGTAPTHAVPEAAL
Trigger: GAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 90 bp CGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGGTaGCTTGCTGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: RVPERKGLLEPLVLR*LAVQQLTDRGPVPQ
Trigger: CTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp CTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTaGGAAGCCACTGCCTGTCAGCTGAGGCAACAGAGGGAGGGAGTG +
Preference number: 1 (lower is better)
Translates to: LCSASSCVHAAEELL*EATACQLRQQREGV
Trigger: CACTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp CAGCTGAGGGTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTaGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAA +
Preference number: 1 (lower is better)
Translates to: QLRVLGFCSVSSHDT*GTCGGWREGARVGK
Trigger: TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp CTCATGTCCTTGGTCACCACGTTGAAGAGGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACTGGGGACAGAAGGGCAGCATCAGCC +
Preference number: 1 (lower is better)
Translates to: LMSLVTTLKRRVTKP*ERTRVTGDRRAASA
Trigger: GGCTGATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGACATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR GCA 90 bp GAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCC +
Preference number: 1 (lower is better)
Translates to: EVKGLPGQADMTNPL*SNQALIWEHLWASS
Trigger: GGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR GCA 90 bp CAGAACCTGGTTATGTCAAAGCTCCCATCCCACATGCCATCCTGCTaGACGGTCTGGTCTCCTGGCAGCTTCCACGGCACAAGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: QNLVMSKLPSHMPSC*TVWSPGSFHGTRGR
Trigger: CCTACCCCTTGTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCTTTGACATAACCAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp CCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTaGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGT +
Preference number: 1 (lower is better)
Translates to: PSHRHRRDLKWSLGC*DMQALSGDCTHSCC
Trigger: ACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp GCTTTGAGTGGCAGAACCTGGTTATGTCAAAGCTCCCATCCCACATaGCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCA +
Preference number: 1 (lower is better)
Translates to: ALSGRTWLCQSSHPT*HPAARSGLLAASTA
Trigger: TGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCTTTGACATAACCAGGTTCTGCCACTCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 90 bp CGGGGTACCTCACCATTCCAGCTCCCAATAACAGGGTTCTGTCCTTaGCAAGGGAGGCTGGTGGCCAGAAGCATGGCTGAACGGGTGATT +
Preference number: 1 (lower is better)
Translates to: RGTSPFQLPITGFCP*QGRLVARSMAERVI
Trigger: AATCACCCGTTCAGCCATGCTTCTGGCCACCAGCCTCCCTTGGCAAGGACAGAACCCTGTTATTGGGAGCTGGAATGGTGAGGTACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp TTCCTCAGAGAATGCATGAGGGAGTTGTCTAGGGAAACACAGACCTaGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: FLRECMRELSRETQT*AMDGTRAVVALGAQ
Trigger: CTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTCTCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp CCCTTGATGTGGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTCCGGGGAGCTGTGATAGCTGTGATA +
Preference number: 1 (lower is better)
Translates to: PLMWTKASALGEVRP*TEKTAFRGAVIAVI
Trigger: TATCACAGCTATCACAGCTCCCCGGAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 90 bp GGGGTGCCCGTTCAGTGCAGGGGACAGGAGAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCA +
Preference number: 1 (lower is better)
Translates to: GVPVQCRGQERKKGV*DALGYAAVTHLQVS
Trigger: TGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp GTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATaGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC +
Preference number: 1 (lower is better)
Translates to: VPEDYPSHRHRRDLK*SLGCWDMQALSGDC
Trigger: GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 90 bp TCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTaGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTA +
Preference number: 1 (lower is better)
Translates to: SPLALRAADHLPAPL*FQKITLRTGTGEIL
Trigger: TAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTT +
Preference number: 1 (lower is better)
Translates to: GTGEKEGCVGCSWLR*SNTSPGLSGFPRKF
Trigger: AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 90 bp TCCTTCTCCCACCCCATCTTCATCAGTCCTGTGCCACTGGAGAGGTaGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTA +
Preference number: 1 (lower is better)
Translates to: SFSHPIFISPVPLER*EMREPILVELGLQL
Trigger: TAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATGAAGATGGGGTGGGAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 90 bp AGGGGAGAAGAAAGACCCTTGAGAGCACTGTATCTCCCACACACCTaGGGCATGTCCTCAGGTAGGGTAAGGAAGGCAGCTAATGTGGGG +
Preference number: 1 (lower is better)
Translates to: RGEERPLRALYLPHT*GMSSGRVRKAANVG
Trigger: CCCCACATTAGCTGCCTTCCTTACCCTACCTGAGGACATGCCTCAGGTGTGTGGGAGATACAGTGCTCTCAAGGGTCTTTCTTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp CTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTaGCCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCG +
Preference number: 1 (lower is better)
Translates to: LFPPWEFLTSSSKGS*PPASPSLVPEDYPS
Trigger: CGAAGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR TCA 90 bp GTAGGAAAACTCACGATGGAGGGAGAAGGGGAGAAGAAAGACCCTTaGGAGCACTGTATCTCCCACACACCTGAGGCATGTCCTCAGGTA +
Preference number: 1 (lower is better)
Translates to: VGKLTMEGEGEKKDP*EHCISHTPEACPQV
Trigger: TACCTGAGGACATGCCTCAGGTGTGTGGGAGATACAGTGCTCTCAAGGGTCTTTCTTCTCCCCTTCTCCCTCCATCGTGAGTTTTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp GTTCAAGGAACAATGTGTTGCGGTATAGAAAAGGCCACACAGCTTTaGGTGGCAGAACCTGGTTATGTCAAAGCTCCCATCCCACATGCC +
Preference number: 1 (lower is better)
Translates to: VQGTMCCGIEKATQL*VAEPGYVKAPIPHA
Trigger: GGCATGTGGGATGGGAGCTTTGACATAACCAGGTTCTGCCACTCAAAGCTGTGTGGCCTTTTCTATACCGCAACACATTGTTCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 90 bp GAACGGGTGATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGCCATaGCCAGTTAGTTCAAGGAACAATGTGTTGCGGTATAGAAAAGGC +
Preference number: 1 (lower is better)
Translates to: ERVILLNPKPLRRVP*PVSSRNNVLRYRKG
Trigger: GCCTTTTCTATACCGCAACACATTGTTCCTTGAACTAACTGGGCATGGCACCCTCCTTAGAGGCTTGGGGTTAAGTAGAATCACCCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 90 bp GACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTaGATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGCATA +
Preference number: 1 (lower is better)
Translates to: DSCEFKVNTTTVDNS*IKSTRASFKTNLSI
Trigger: TATGCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR-3UTR TCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR CAA 90 bp CCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTaGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: PELQACGWVLGSRCH*GKPVAGLVCRGKGG
Trigger: CCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: APQADGQRLTSGRQPFIICPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAAGCTTCAGGTCCCCTTaGTGTGGACCAAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WPPGCPSGRWAAADFGKASFRSP*CGPRPV
Trigger: CACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR GCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR GCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: TADRQRACASEPPTRRGQRREDT*ISRQQR
Trigger: CCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: CPSGRWAAADFGKAALHYCPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGGCCTGGAGGGAGGTCTaGGACTGCCCTGCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: VSGLLGHAGSEWGLHPLMAWREV*DCPAAL
Trigger: GAGGGCTGCAGGGCAGTCCCAGACCTCCCTCCAGGC...CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 2 (lower is better)
Translates to: GGASVPTGPWATVPRLRQEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CAA 90 bp GGCTCTGCTTCCAGAAGGGCCTGGACAACCTCAGAGGTCAGGGTGTaGAGCCAGGGGGCTCACCTTCCTCTCCTGCCAAGGGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GSASRRAWTTSEVRV*SQGAHLPLLPRGCQ
Trigger: CTGGCAGCCCCTTGGCAGGAGAGGAAGGTGAGCCCCCTGGCTCAACACCCTGACCTCTGAGGTTGTCCAGGCCCTTCTGGAAGCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp GGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGCCACTGCCTGTCAGCTaGGGCAACAGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GHRGGGSHPAVSQSQRPVPLPVS*GNRGRE
Trigger: CTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGG...CACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGACTGGTGGCAGGGGGTaGCCGTTCAGTGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: DGHRGGGSHPAVSQSQRPTGGRG*PFSAGD
Trigger: GTCCCCTGCACTGAACGGGCACCCCCTGCCACCAGT...CGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCCTGAGACTGGTGGCCTaGACGGGTGTGCTGGGGGAA +
Preference number: 2 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLLRLVA*TGVLGE
Trigger: TTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAG...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 2 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQCPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 2 (lower is better)
Translates to: DGHRGGGSHPAVSQSQRPEARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...CGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 2 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAEARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 2 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCATTTGGGTAAGCCGGTaGCTGGTCTCGTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: GTAPTHAVPEAALSSPRSIWVSR*LVSSAG
Trigger: CCCGGCAGACGAGACCAGCCACCGGCTTACCCAAAT...GCTCCTGGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: QAGQMGPEACTCTPQARGSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
3UTR-3UTR TCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCCCACTGCCTGTCAGCTaGGGCAACAGAGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAPLPVS*GNRGRE
Trigger: CTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGG...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GGASVPTGPWATVPRLRQGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GGGAAGGGTTGGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTGGGACTGCCCTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 2 (lower is better)
Translates to: GKGWRGLETSLEGGLGLPCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...GGGCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGAGCTCCCATCCCACATaGCATCCTGCTGCACGGTCT +
Preference number: 2 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQSSHPT*HPAARS
Trigger: AGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCT...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp GGAGGGCCTGGCCTGAGGGAGGGATGCCTCAATCCAGACTTTGGAGGCAGTGCCACGGACACGGGTCACTaGGGACAGAAGGGCAGCATC +
Preference number: 2 (lower is better)
Translates to: GGPGLREGCLNPDFGGSATDTGH*GQKGSI
Trigger: GATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGT...GGCACTGCCTCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp GTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGGCCTTGAGACGAGCCTaGAGGGAGGTCTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: VSGLLGHAGSEWGLHPLMALRRA*REVWDC
Trigger: GCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGC...CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGC +
Preference number: 2 (lower is better)
Translates to: GAETGGLHGCAGGSASHCPDGKG*RGLETS
Trigger: GCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGG...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CAA 90 bp CGTGCACACCACAGGCTAGAGGCTTCAGGGAAGCTTCAGGTCCCCTaGATGTGGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: RAHHRLEASGKLQVP*MWTKASALGEVRPW
Trigger: CCATGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTCTAGCCTGTGGTGTGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp CCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTTGGATGAGGTGGAAGTaGCAGTGTGCCGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PSARTAGLRLGLRLPLPFWMRWK*QCAGSP
Trigger: TGGGGACCCGGCACACTGTCACTTCCACCTCATCCA...AAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GGAGGGCCTGGCCTGAGGGAGGGATGCCTCAATCCAGACTTTGGAGGCAGTGCCATGCCTGCCTGGCTGTaGGGGGTAGAGGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: GGPGLREGCLNPDFGGSAMPAWL*GVEVKT
Trigger: TGTCTTCACCTCTACCCCTCACAGCCAGGCAGGCAT...GGCACTGCCTCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR GCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCCAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 2 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTGGTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 2 (lower is better)
Translates to: ASVPTGPWATVPRLRQGWCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...CCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: LVACTGVLGEVLATALYPQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CCCCGGGGTACCTCACCATTCCAGCTCCCAATAACAGGGTTCTGTCCTTGCCAACACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: PRGTSPFQLPITGFCPCQHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...TTGGCAAGGACAGAACCCTGTTATTGGGAGCTGGAATGGTGAGGTACCCCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp GGAGGGCCTGGCCTGAGGGAGGGATGCCTCAATCCAGACTTTGGAGGCAGTGCCAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GGPGLREGCLNPDFGGSARLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...GGCACTGCCTCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp CAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGC +
Preference number: 2 (lower is better)
Translates to: QQLTDRGPVPQSHQPDEGPDGKG*RGLETS
Trigger: GCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGG...GCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGGCCTGTTGGAGCCACTaGTTCTTAGGTGGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPEACWSH*FLGGLL
Trigger: CAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 2 (lower is better)
Translates to: PVPLERWEMREPILVELGEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...ACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATCGGCCTTGTCACTGGTaGAGGCTGCTTTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDRPCHW*RLLWMR
Trigger: CCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCG...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAGAGCCGTTGTGGCTCTaGGGGCTCAGGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: HDTWGTCGGWREGARVGKEPLWL*GLRQVQ
Trigger: CTGCACCTGCCTGAGCCCCCAGAGCCACAACGGCTC...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp CTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LHYQRLCSLWSLHWGKLWPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...CCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGCATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRHRAPS*WAPWWR
Trigger: CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATG...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGCACTCATGCTGTTCCTaGGGCCGCCCTCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWHSCCS*GRPLQS
Trigger: GGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTG...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTCAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 2 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCACTGGTGGCAGGGGGTaGCCGTTCAGTGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RGFLCSASSCVHAAEELLTGGRG*PFSAGD
Trigger: GTCCCCTGCACTGAACGGGCACCCCCTGCCACCAGT...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: EASCALPPLVSMLQKSCSRREDT*ISRQQR
Trigger: CCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGGGCGAGGCTGGGAGGTGGGGGTTTGCCAGGAGCCTGTGGTTTCTCTTGGATCATGCTGAAGGGGCTCTaGTTCCAGAAGGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: WARLGGGGLPGACGFSWIMLKGL*FQKGLD
Trigger: GTCCAGGCCCTTCTGGAAGCAGAGCCCCTTCAGCAT...GATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAGCCTCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR GCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGCTGGGGCACCATGTCTaGCGAAAGCTCAGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: EASGKLQVPLMWTKASALLGHHV*RKLSGR
Trigger: CCTGCCACTGAGCTTTCGGCAGACATGGTGCCCCAG...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGACGGACACGGGTCACTaGGGACAGAAGGGCAGCATC +
Preference number: 2 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGTDTGH*GQKGSI
Trigger: GATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGT...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp AGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 2 (lower is better)
Translates to: RLPVLCLLLCPCCRRAALEARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCCGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RGFLCSASSCVHAAEELLRGRGG*ETLMGR
Trigger: CCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCG...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGCCTGTTGGAGCCACTaGTTCTTAGGTGGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGACWSH*FLGGLL
Trigger: CAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAGAACGCACAGTGAGTTaGGGGGAGGGCACGGGAGTG +
Preference number: 2 (lower is better)
Translates to: HDTWGTCGGWREGARVGKERTVS*GEGTGV
Trigger: CACTCCCGTGCCCTCCCCCCAACTCACTGTGCGTTC...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAGACCTGGGCCATGGATaGAACGCGAGCCGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: HDTWGTCGGWREGARVGKDLGHG*NASRCG
Trigger: GCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTC...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CAA 90 bp TGTGTCCGCCCTCTTAATGCGGCCTTGTCACTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACAGTGTGCCGGGTCCCCAGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: CVRPLNAALSLVEAA*DEVEVTVCRVPRGF
Trigger: GAAGCCTCTGGGGACCCGGCACACTGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGGGCGGACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCAGGGGACAACAGTGCCTaGCCCAAGCCCCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSGDNSA*PKPLTG
Trigger: CCCAGTGAGGGGCTTGGGTCAGGCACTGTTGTCCCC...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGGAAGGGTGTGTGGGATaGTCTTGGTTACGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: TADRQRACASEPPTRRGQEGCVG*SWLRCS
Trigger: ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 2 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTATGCTGCAGAAGAGCTaGTCTGGGAAGCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVAMLQKS*SGKPLP
Trigger: AGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCAT...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGGGGAGGCAGGATGCTTaGCCAGAAAGGTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: VSGLLGHAGSEWGLHPLMGRQDA*PERCFP
Trigger: AGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCC...CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGCCTTGAGACGAGCCTaGAGGGAGGTCTGGGACTGC +
Preference number: 2 (lower is better)
Translates to: EASCALPPLVSMLQKSCSALRRA*REVWDC
Trigger: GCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGC...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCGTGAGCTGGGCATTTaGTTGCCCCTGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQRRELGI*LPLNLR
Trigger: CCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACG...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGATTTGGGTAAGCCGGTaGCTGGTCTCGTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWIWVSR*LVSSAG
Trigger: CCCGGCAGACGAGACCAGCCACCGGCTTACCCAAAT...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCCTGAAGGGAGCCCCGTaGCTCAGCACTCCCAGGGGA +
Preference number: 2 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGLKGAP*LSTPRG
Trigger: TCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTCAG...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
3UTR-3UTR TCA 90 bp CAGCTGAGGGTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTGGGGCACAGAGAGAGACCCAGGTTaGTCTGGGAATCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QLRVLGFCSVSSHDTWGTERDPG*SGNLSL
Trigger: GAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTC...TGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWISRQA*LRARRL
Trigger: TAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTAT...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: RGFLCSASSCVHAAEELLLLCNS*PTEGLC
Trigger: GCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAA...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGGATGAGGTGGAAGTaGCAGTGTGCCGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRWMRWK*QCAGSP
Trigger: TGGGGACCCGGCACACTGTCACTTCCACCTCATCCA...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLVLVPA*AGHLVA
Trigger: GGCAACCAAATGCCCAGCTCACGCGGGCACTAGGAC...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 2 (lower is better)
Translates to: CPSGRWAAADFGKAALHYQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 2 (lower is better)
Translates to: AGLGQRETQVDLGISASAMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 2 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp TGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: WHRPSRVHVPVAHCTDHEGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...TTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CATCAGTCCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGATGCCCTGCAGCCCTCTaGTCTCTGTGCAAGTGCCTG +
Preference number: 2 (lower is better)
Translates to: HQSCATGEVGDEGADSCGCPAAL*SLCKCL
Trigger: CAGGCACTTGCACAGAGAGCAGAGGGCTGCAGGGCA...TCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTCTCTCCTCTTGTGTCCATaGTGCAGAAGAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: VACTGVLGEVLATALYPSLLLCP*CRRAAL
Trigger: CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAG...AGAAGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGCTTCCTGTGCTCTaGCTCCTCTTGTGTCCATGC +
Preference number: 2 (lower is better)
Translates to: LLGHAGSEWGLHPLMLFLRLPVL*LLLCPC
Trigger: GCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT...CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTGCACCTGTGCCATCGTaGTCCCTCCTGATGGGCACC +
Preference number: 2 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLAPVPS*SLLMGT
Trigger: GGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGC...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 2 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWRKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGACAAGTGCCTGGCTCCTaGTGTCCACCCAAGGATAAG +
Preference number: 2 (lower is better)
Translates to: CATADRQRACASEPPTRRQVPGS*CPPKDK
Trigger: CTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTG...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGCGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RWEMREPILVELGLQLLRRGRGG*ETLMGR
Trigger: CCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCG...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp ACTGAGTGGGCTTCAGTAAGGCCAGAAGGCAGAGGGAACTTCCTATTCCGAGAAGGGCTGCCAGAAAGCTaGACCCCAGCCAGCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TEWASVRPEGRGNFLFREGLPES*TPASGL
Trigger: GAGGCCGCTGGCTGGGGTCCAGCTTTCTGGCAGCCC...TTCTCGGAATAGGAAGTTCCCTCTGCCTTCTGGCCTTACTGAAGCCCACTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp GGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGGGGGATGGAGGGCACTATaGGAAGTGCATGCAGATGAC +
Preference number: 2 (lower is better)
Translates to: GFREASGPLDVDQGQCPGGWRAL*EVHADD
Trigger: GTCATCTGCATGCACTTCCCATAGTGCCCTCCATCC...CCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CAA 90 bp GCTGTGAGGGGTAGAGGTGAAGACAGACTGTTCCAAGTGAGGAGGTaGAGGAAGAGGCAAGGACACACCCCTGCTCTAGGCTCACCGCAC +
Preference number: 2 (lower is better)
Translates to: AVRGRGEDRLFQVRR*RKRQGHTPALGSPH
Trigger: GTGCGGTGAGCCTAGAGCAGGGGTGTGTCCTTGCCTCTTCCTCAACCTCCTCACTTGGAACAGTCTGTCTTCACCTCTACCCCTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCCCAACTGCGTGTTCCTaGGAGGAAGGGCCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: RGFLCSASSCVHAAEELLPTACS*EEGPVG
Trigger: TCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGG...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp ACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTCCTTTTGTGAGGTGCTaGGACTGGTGGCCTGCACGG +
Preference number: 2 (lower is better)
Translates to: TGEVGDEGADSCGAWSAVPFVRC*DWWPAR
Trigger: CCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGG...AACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp ATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCTTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: MGGRMLAQKGAFLQTVQGLVCSY*GHQPGP
Trigger: AGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAA...GCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 2 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: EASCALPPLVSMLQKSCSQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATAGCTGCCCAGCCAACTaGGTGTTCCTGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: FWHRPSRVHVPVAHCTDHSCPAN*VFLRGR
Trigger: CCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCT...ATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTATGCTGCAGAAGAGCTaGTCTGGGAAGCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: PVPLERWEMREPILVELGMLQKS*SGKPLP
Trigger: AGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCAT...ACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGAAGAAGACAGCCCCCTaGCCCATCTTCTGGCACAGG +
Preference number: 2 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRKKTAP*PIFWHR
Trigger: CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTT...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CAACAGTGCCTGACCCAAGCCCCTCACTGGGAGGTAAAGGGGCTGCCGGGACAGATCTGGGAACATTTGTaGGCTAGCTCCTATGTGCCT +
Preference number: 2 (lower is better)
Translates to: QQCLTQAPHWEVKGLPGQIWEHL*ASSYVP
Trigger: AGGCACATAGGAGCTAGCCCACAAATGTTCCCAGAT...CTGTCCCGGCAGCCCCTTTACCTCCCAGTGAGGGGCTTGGGTCAGGCACTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGAACCAGGCCCTCATCTaGGAACATTTGTGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: EASGKLQVPLMWTKASALNQALI*EHLWAS
Trigger: GCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTT...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 2 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTC +
Preference number: 2 (lower is better)
Translates to: QAGQMGPEACTCTPQARGGEVRP*TEKTAF
Trigger: GAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACC...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCAGCCTGGAGGGAGGTCTaGGACTGCCCTGCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPAWREV*DCPAAL
Trigger: GAGGGCTGCAGGGCAGTCCCAGACCTCCCTCCAGGC...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: HGNFSPLALRAADHLPAPVEEVL*SREEAR
Trigger: CCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCAC...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: RLPVLCLLLCPCCRRAALVEEVL*SREEAR
Trigger: CCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCAC...CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CAA 90 bp AGCCACTGCCCTTTACCCTTCTGTGTCCGCCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCTTTGGATGAGGTGGAAGTGACAGTG +
Preference number: 2 (lower is better)
Translates to: SHCPLPFCVRPLNAA*SLVEAALDEVEVTV
Trigger: CACTGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGGGCGGACACAGAAGGGTAAAGGGCAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTGAGAGAGACCCAGGTTaGTCTGGGAATCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFERDPG*SGNLSL
Trigger: GAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTC...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp CTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 2 (lower is better)
Translates to: LHYQRLCSLWSLHWGKLWRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...CCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GGCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAAAATGGGGACAACAGTaGCTGACCCAAGCCCCTCAC +
Preference number: 2 (lower is better)
Translates to: GSPSLSETVQPVEPSLGEKWGQQ*LTQAPH
Trigger: GTGAGGGGCTTGGGTCAGGCACTGTTGTCCCCATTT...TTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGCAAGGAACAATGTGTTaGGGTATAGAAAAGGCCACA +
Preference number: 2 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQQGTMC*GIEKAT
Trigger: TGTGGCCTTTTCTATACCGCAACACATTGTTCCTTG...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CCA 90 bp CCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTAGAGGAAGGGCCTGTTaGAGCCACTGGTTCTTAGGT +
Preference number: 2 (lower is better)
Translates to: PVPLERWEMREPILVELGRGRAC*SHWFLG
Trigger: ACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCT...ACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTCGTGAGCTGGGCATTTaGTTGCCCCTGAACCTCAGG +
Preference number: 2 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLRELGI*LPLNLR
Trigger: CCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACG...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAGGAAGGCAGCTAATGTaGGGTGGTTGTGGGAACAGA +
Preference number: 2 (lower is better)
Translates to: HDTWGTCGGWREGARVGKGRQLM*GGCGNR
Trigger: TCTGTTCCCACAACCACCCCACATTAGCTGCCTTCC...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR GCA 90 bp GGCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAACAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 2 (lower is better)
Translates to: GSPSLSETVQPVEPSLGEQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...TTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTTGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGATGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: CATADRQRACASEPPTRRCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGATCTGGGAACATTTGTaGGCTAGCTCCTATGTGCCT +
Preference number: 2 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGIWEHL*ASSYVP
Trigger: AGGCACATAGGAGCTAGCCCACAAATGTTCCCAGAT...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp CAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCAACCAGGCCCTCATCTaGGAACATTTGTGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: QPFIIRDCAACGAFTGGSNQALI*EHLWAS
Trigger: GCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTT...GCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGAACCAGGCCCTCATCTaGGAACATTTGTGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKNQALI*EHLWAS
Trigger: GCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTT...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGC +
Preference number: 2 (lower is better)
Translates to: RWEMREPILVELGLQLLRSHRSQ*LRDSSR
Trigger: GCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGA...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR-3UTR TCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTTTATCATTTGTACCATaGTGCGGTTTCTGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVALSFVP*CGFWLC
Trigger: ACACAGCCAGAAACCGCATCATGGTACAAATGATAA...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCGAAGCCACCGGCCACTaGCACGCATGTTGCACCTGT +
Preference number: 2 (lower is better)
Translates to: CTNITSLFQTPTVLTSPTEATGH*HACCTC
Trigger: ACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTC...GGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGGGGTAAAATCTAGGTGGTaGGTATGTGGTGTTCACTGT +
Preference number: 2 (lower is better)
Translates to: GFREASGPLDVDQGQCPGVKSRW*VCGVHC
Trigger: ACAGTGAACACCACATACCCACCACCTAGATTTTAC...CCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp TTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: FWHRPSRVHVPVAHCTDHISRQA*LRARRL
Trigger: TAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTAT...ATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACAAATGGGGACAACAGTaGCTGACCCAAGCCCCTCAC +
Preference number: 2 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHKWGQQ*LTQAPH
Trigger: GTGAGGGGCTTGGGTCAGGCACTGTTGTCCCCATTT...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 2 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRRKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 2 (lower is better)
Translates to: RGFLCSASSCVHAAEELLRKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp ACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCAGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCC +
Preference number: 2 (lower is better)
Translates to: TGHPECMSLLPTALIMKPDSCGA*SAVIEA
Trigger: GGCCTCAATAACTGCAGACCAAGCTCCACAAGAATC...TGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR TCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCATCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGC +
Preference number: 2 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPSHRSQ*LRDSSR
Trigger: GCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGA...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
3UTR-3UTR TCA 90 bp TGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCGGAGGCTGCTTTGGATaGGGTGGAAGTGACAGTGTG +
Preference number: 2 (lower is better)
Translates to: CTNITSLFQTPTVLTSPTGGCFG*GGSDSV
Trigger: CACACTGTCACTTCCACCTCATCCAAAGCAGCCTCC...GGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGACCGGCCTTCTGCTGCTaGAACAGGGCTGAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRPAFCC*NRAEGS
Trigger: GCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
3UTR-3UTR CCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 2 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp AGAAGCATGGCTGAACGGGTGATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTC +
Preference number: 2 (lower is better)
Translates to: RSMAERVILLNPKPLRRVGEVRP*TEKTAF
Trigger: GAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACC...CACCCTCCTTAGAGGCTTGGGGTTAAGTAGAATCACCCGTTCAGCCATGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CAA 90 bp AAGAGACAAAGGCTGTTAAGTTTCCTCAGAGAATGCATGAGGGAGTaGTCTAGGGAAACACAGACCTGGGCCATGGATGGAACGCGAGCC +
Preference number: 2 (lower is better)
Translates to: KRQRLLSFLRECMRE*SRETQTWAMDGTRA
Trigger: GGCTCGCGTTCCATCCATGGCCCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTCTCTGAGGAAACTTAACAGCCTTTGTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp TTAAGTTTCCTCAGAGAATGCATGAGGGAGTTGTCTAGGGAAACACAGACCTGGGTATTTCCCAGCTGCTaGCAGGCTGGACAAATGGGG +
Preference number: 2 (lower is better)
Translates to: LSFLRECMRELSRETQTWVFPSC*QAGQMG
Trigger: CCCCATTTGTCCAGCCTGTCAGCAGCTGGGAAATAC...CCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTCTCTGAGGAAACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGGGGGACAACAGTGCCTaGCCCAAGCCCCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRGDNSA*PKPLTG
Trigger: CCCAGTGAGGGGCTTGGGTCAGGCACTGTTGTCCCC...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR TCA 90 bp AAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAATATTACCTCCCGCATTTGGTTGCCCCTaGACCTCAGGGAAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: KVIHLGGIFNKHALILPPAFGCP*TSGKGG
Trigger: ACCCCCTTTCCCTGAGGTTCAGGGGCAACCAAATGC...GGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCCTCCCAGGTGAATGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp AAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAATATTACCTCCCCACTGCCACGCATGTTaGACCTGTGCCATCGTGCTC +
Preference number: 2 (lower is better)
Translates to: KVIHLGGIFNKHALILPPHCHAC*TCAIVL
Trigger: GAGCACGATGGCACAGGTGCAACATGCGTGGCAGTG...GGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCCTCCCAGGTGAATGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGGCTCTGAGTGGGGACTaGACCCACTCATGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: GIFNKHALILPPSSKLLLALSGD*THSCCS
Trigger: GGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGC...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp ATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCGCTCCCGCTGCCATTTaGGTAAGCCGGTGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: ITWFLFNCLVLIEFTRSGAPAAI*VSRWLV
Trigger: GACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGC...GCCAGACCTGGTAAATTCTATCAAAACTAGACAGTTAAATAAGAACCACGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR-3UTR TCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATGGACAAATGGGGCCTaGGGCTTGTACGTGCACACC +
Preference number: 2 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKWTNGA*GLYVHT
Trigger: GGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCA...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAGTATTTCCCAGCTGCTaGCAGGCTGGACAAATGGGG +
Preference number: 2 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPVFPSC*QAGQMG
Trigger: CCCCATTTGTCCAGCCTGTCAGCAGCTGGGAAATAC...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGAGCTTCAGGTCCCCTTaGTGTGGACCAAGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLSFRSP*CGPRPV
Trigger: CACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCT...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR TCA 90 bp AAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAATATTACCTCCCTTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: KVIHLGGIFNKHALILPPLVCSY*GHQPGP
Trigger: AGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAA...GGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCCTCCCAGGTGAATGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR GCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACCCTGAGGCTTGTACGTaGACACCACAGGCTAGAGGC +
Preference number: 2 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNPEACT*TPQARG
Trigger: GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGG...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR GCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTGTGTCTGGGCAGCTTaGCTGGTGGATGTTTCTGGC +
Preference number: 2 (lower is better)
Translates to: GIFNKHALILPPSSKLLLCVWAA*LVDVSG
Trigger: GCCAGAAACATCCACCAGGCAAGCTGCCCAGACACA...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGACAGGCTGGACAAATaGGGCCTGAGGCTTGTACGT +
Preference number: 2 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNDRLDK*GLRLVR
Trigger: ACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
3UTR-3UTR CCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGGCAATAAAAATAGGATaGATTGAAGCAGGGATGAAT +
Preference number: 2 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRAIKIG*IEAGMN
Trigger: ATTCATCCCTGCTTCAATCCATCCTATTTTTATTGC...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461069.6
ENST00000647056.1
3UTR CCA 72 bp CCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTaGGGGCTCAGGCAGGTGCAGGGCAGGCGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: PGPWMEREPLWL*GLRQVQGRRRN
Trigger: GTTCCTTCGCCTGCCCTGCACCTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp GGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGGGTTGGAGAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: GHGKRQGRGRGG*ETLMGRVGEAL
Trigger: CAAGGCCTCTCCAACCCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 72 bp GGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTaGGGGGCTAAGGGACCAGGGCTGGCCCTGATCCAC +
Preference number: 3 (lower is better)
Translates to: GPWATVPRLRQG*GAKGPGLALIH
Trigger: GTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 72 bp GGGCTCAGGCAGGTGCAGGGCAGGCGAAGGAACAGCTaGCTGTCACCAGGGTGGAGACCTTGCCAGGTGAGC +
Preference number: 3 (lower is better)
Translates to: GLRQVQGRRRNS*LSPGWRPCQVS
Trigger: GCTCACCTGGCAAGGTCTCCACCCTGGTGACAGCCAGCTGTTCCTTCGCCTGCCCTGCACCTGCCTGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CAA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGCTCCCGCTGCCATTaGGGTAAGCCGGTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: GGASVPTGPWATVPRLRQGSRCH*GKPVAG
Trigger: ACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCC...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR TCA 72 bp TTCCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGC +
Preference number: 3 (lower is better)
Translates to: FRGAVIASRPSP*ATTLGSVYSGR
Trigger: GCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
3UTR GCA 72 bp CCACCAACCAGACGAGGGCAGCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGGTGGAAGAGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: PPTRRGQRREDT*ISRQQRWKRCS
Trigger: AGAGCACCTCTTCCACCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCGCTGCCCTCGTCTGGTTGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp GAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTaGCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGC +
Preference number: 3 (lower is better)
Translates to: ELQACGWVLGSR*HLGKPVAGLVC
Trigger: GCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp CCGCTGAGGGCAGTATCTAGGCTGGGGCACCATGTCTaGCGAAAGCTCAGTGGCAGGGCAGAGAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: PLRAVSRLGHHV*RKLSGRAERAW
Trigger: CCAGGCCCTCTCTGCCCTGCCACTGAGCTTTCGGCAGACATGGTGCCCCAGCCTAGATACTGCCCTCAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp AGGCAGAGGCGGCTGGGAGACCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: RQRRLGDPDGKG*RGLETSLEGGL
Trigger: CAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp AGAGGGTCGGCCCAGATGGTCTCAGGGCAAGTGCCATaGCGACAGTCCAGGGCAACATGGGCGAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: RGSAQMVSGQVP*RQSRATWARLG
Trigger: TCCCAGCCTCGCCCATGTTGCCCTGGACTGTCGTCATGGCACTTGCCCTGAGACCATCTGGGCCGACCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 72 bp TCAGCTGAGGCAACAGAGGGAGGGAGTGCGTGGAGCTaGCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: SAEATEGGSAWS*PANCVFLRGRA
Trigger: GGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTCTGTTGCCTCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTaGACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: RRAFCEVLRLVA*TGVLGEVLATA
Trigger: GGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 72 bp CTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAACACACCCTGTGTATCA +
Preference number: 3 (lower is better)
Translates to: LCSLWSLHWGKL*GGLGPNTPCVS
Trigger: TGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR CCA 72 bp ACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTaGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCG +
Preference number: 3 (lower is better)
Translates to: TSHLLPELQACG*VLGSRCHLGKP
Trigger: CGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCAGGGTTGGAGAGGCCTaGAGACGAGCCTGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVARVGEA*RRAWRE
Trigger: CTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCT...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp GCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTGGCCACTGCCACGCATGTaGCACCTGTGCCATCGTGCT +
Preference number: 3 (lower is better)
Translates to: ASVPTGPWATVPRLRQGWPLPRM*HLCHRA
Trigger: AGCACGATGGCACAGGTGCAACATGCGTGGCAGTGG...CCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp GGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: GHRGGGSHPAVSQSQRPVELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...CACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp AACCTCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTaGGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: NLRERGWEACLL*GAETGGLHGCA
Trigger: AGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp CCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGGAAGTCACCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: PRMLHLCHRAPS*WAPWWRKSPSC
Trigger: ACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp CACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTaGACTGATCATGAAGCCACCGGCCACTGCCACGCA +
Preference number: 3 (lower is better)
Translates to: HRPSRVHVPVAH*TDHEATGHCHA
Trigger: TGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 72 bp GGAGGTGGGGGTTTGCCAGGAGCCTGTGGTTTCTCTTaGATCCCGCTGAGGGCAGTATCTAGGCTGGGGCAC +
Preference number: 3 (lower is better)
Translates to: GGGGLPGACGFS*IPLRAVSRLGH
Trigger: GTGCCCCAGCCTAGATACTGCCCTCAGCGGGATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp CGAAAAGGGGCTGGGCCAGGAGCTTGGAGGGCCTGGTaGTTTGAAGAGCACAGGGAAGCGCCACATGAGGGA +
Preference number: 3 (lower is better)
Translates to: RKGAGPGAWRAW*FEEHREAPHEG
Trigger: TCCCTCATGTGGCGCTTCCCTGTGCTCTTCAAACCACCAGGCCCTCCAAGCTCCTGGCCCAGCCCCTTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp GTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTaGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGT +
Preference number: 3 (lower is better)
Translates to: VLGFCSVSSHDT*GTCGGWREGAR
Trigger: ACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CAA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCCTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 3 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPLIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CAA 90 bp GGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGCTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACA +
Preference number: 3 (lower is better)
Translates to: GHRGGGSHPAVSQSQRPVLVEAA*DEVEVT
Trigger: TGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAG...CACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGCTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACA +
Preference number: 3 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGLVEAA*DEVEVT
Trigger: TGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAG...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp GTTATTGAGGCCACCAGCCTGGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCCCCTGAACCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: VIEATSLVLVPA*AGHLVAPEPQG
Trigger: TCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACGCGGGCACTAGGACCAGGCTGGTGGCCTCAATAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp GGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCTAGTGCCCGCGTGAGC +
Preference number: 3 (lower is better)
Translates to: GSRFLWSLVCSY*GHQPGPSARVS
Trigger: GCTCACGCGGGCACTAGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp TGGGACTGCCCTGCAGCCCTCTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGA +
Preference number: 3 (lower is better)
Translates to: WDCPAALCSLCK*LAPGVHPRISR
Trigger: TCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCAGAGGGCTGCAGGGCAGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp ACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTaGACCTGTGCCATCGTGCTCCCTCCTGATGGGCAC +
Preference number: 3 (lower is better)
Translates to: TDHEATGHCHAC*TCAIVLPPDGH
Trigger: GTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp GTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTaGCACGCATGTTGCACCTGTGCCATCGTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: VAHCTDHEATGH*HACCTCAIVLP
Trigger: AGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp CCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTaGATGTCCCTGTTGCCCACTGCACTGATCATGAAG +
Preference number: 3 (lower is better)
Translates to: PPAPSSGTGHPE*MSLLPTALIMK
Trigger: CTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp GGTGGGGAGGTGCAATGGGATGGGAGGCAGGATGCTTaGCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GGEVQWDGRQDA*PERCFPSDGAG
Trigger: CCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR GCA 72 bp GGCAGAGGACAGGAGCAGCTGAGGGTGCTGGGCTTTTaGTCTGTGTCGTCCCATGACACGTGGGGCACATGT +
Preference number: 3 (lower is better)
Translates to: GRGQEQLRVLGF*SVSSHDTWGTC
Trigger: ACATGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTGCTCCTGTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp CTAGAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTaGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: LEASGKLQVPLM*TKASALGEVRP
Trigger: TGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR CCA 72 bp GCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTaGTTCCAGAAGATTACCCTTCGCACCGGCACAGGA +
Preference number: 3 (lower is better)
Translates to: ALRAADHLPAPL*FQKITLRTGTG
Trigger: TCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCTTGGTCTGCAGTTATaGAGGCCACCAGCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQRLGLQL*RPPAWS
Trigger: GGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAG...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp AGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGCCTCAGAGCCACCAAC +
Preference number: 3 (lower is better)
Translates to: SHWFLGGLLCNS*PTEGLCLRATN
Trigger: GTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp GGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATCTGGGAACATTTGTGG +
Preference number: 3 (lower is better)
Translates to: GLPGQADMTNPL*SNQALIWEHLW
Trigger: CCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR GCA 72 bp GGGTCAGGGCCTCCCAAAGTAATGCTGAAGGGGCTCTaGTTCCAGAAGGGCCTGGACAACCTCAGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: GSGPPKVMLKGL*FQKGLDNLRGQ
Trigger: CTGACCTCTGAGGTTGTCCAGGCCCTTCTGGAAGCAGAGCCCCTTCAGCATTACTTTGGGAGGCCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp TGGACCAAGGCCAGTGCCCTGGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTCCGGGGAGCTGTGATA +
Preference number: 3 (lower is better)
Translates to: WTKASALGEVRP*TEKTAFRGAVI
Trigger: TATCACAGCTCCCCGGAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACCCAGGGCACTGGCCTTGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
3UTR CCA 72 bp GAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGGTaGCTTGCTGTGCAACAGCTGACCGACAGAGGGCCT +
Preference number: 3 (lower is better)
Translates to: ERKGLLEPLVLR*LAVQQLTDRGP
Trigger: AGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 72 bp CGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTaGGACATGCAGGCTCTGAGTGGGGACTGCACCCAC +
Preference number: 3 (lower is better)
Translates to: RHRRDLKWSLGC*DMQALSGDCTH
Trigger: GTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp AGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGCTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 3 (lower is better)
Translates to: RDCAACGAFTGGSSGVGWLIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...CCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CAA 90 bp GGGAAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: GKLWGGLGPNTPCVSEGPSFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...TGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CAA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTCCACTGCCACGCATGTaGCACCTGTGCCATCGTGCT +
Preference number: 3 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLPLPRM*HLCHRA
Trigger: AGCACGATGGCACAGGTGCAACATGCGTGGCAGTGG...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGGAGTGCATGTCCCTGTaGCCCACTGCACTGATCATG +
Preference number: 3 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWECMSL*PTALIM
Trigger: CATGATCAGTGCAGTGGGCAACAGGGACATGCACTC...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp TGGGCGAGGCTGGGAGGTGGGGGTTTGCCAGGAGCCTGTGGTTTCTCTTGGATCAAAGGCCACACAGCTTaGAGTGGCAGAACCTGGTTA +
Preference number: 3 (lower is better)
Translates to: WARLGGGGLPGACGFSWIKGHTA*SGRTWL
Trigger: TAACCAGGTTCTGCCACTCAAAGCTGTGTGGCCTTT...GATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAGCCTCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 72 bp TTGGTCACCACGTTGAAGAGGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACTGGGGACAGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: LVTTLKRRVTKP*ERTRVTGDRRA
Trigger: TGCCCTTCTGTCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTGGTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR TCA 72 bp GCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTAGGGACTGGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: APGVHPRISRQA*LRARRLGTGGR
Trigger: CCTGCCACCAGTCCCTAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp GTTATGTCAAAGCTCCCATCCCACATGCCATCCTGCTaGACGGTCTGGTCTCCTGGCAGCTTCCACGGCACA +
Preference number: 3 (lower is better)
Translates to: VMSKLPSHMPSC*TVWSPGSFHGT
Trigger: TGTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCTTTGACATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 72 bp GGCAGAACCTGGTTATGTCAAAGCTCCCATCCCACATaGCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: GRTWLCQSSHPT*HPAARSGLLAA
Trigger: AGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCTTTGACATAACCAGGTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 72 bp TTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTaGGTGGGGACTGCACCCACTCATGCTGTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: LNGLWAAGTCRL*VGTAPTHAVPE
Trigger: CTCAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CCA 72 bp GAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCCACCAGCCTGGTCCTA +
Preference number: 3 (lower is better)
Translates to: EVGDEGADSCGA*SAVIEATSLVL
Trigger: TAGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 72 bp GAATGCATGAGGGAGTTGTCTAGGGAAACACAGACCTaGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: ECMRELSRETQT*AMDGTRAVVAL
Trigger: CAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CAA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTTCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 3 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFSLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
3UTR-3UTR CAA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: RWEMREPILVELGLQLLRPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp TCTTCATCAGTCCTGTGCCACTGGAGAGGTGGGAGATaGGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: SSSVLCHWRGGR*GSRFLWSLVCS
Trigger: ACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGTCTCAGCGGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: EKEGCVGCSWLR*SNTSPGLSGFP
Trigger: CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR GCA 72 bp TCACCATTCCAGCTCCCAATAACAGGGTTCTGTCCTTaGCAAGGGAGGCTGGTGGCCAGAAGCATGGCTGAA +
Preference number: 3 (lower is better)
Translates to: SPFQLPITGFCP*QGRLVARSMAE
Trigger: TTCAGCCATGCTTCTGGCCACCAGCCTCCCTTGGCAAGGACAGAACCCTGTTATTGGGAGCTGGAATGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 72 bp GGAGGCAGTGCCTTCACCAGTAACAAGAGATATGCCTaGCTGGCTGTGAGGGGTAGAGGTGAAGACAGACTG +
Preference number: 3 (lower is better)
Translates to: GGSAFTSNKRYA*LAVRGRGEDRL
Trigger: CAGTCTGTCTTCACCTCTACCCCTCACAGCCAGGCAGGCATATCTCTTGTTACTGGTGAAGGCACTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATaGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: DYPSHRHRRDLK*SLGCWDMQALS
Trigger: ACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR-3UTR CAA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGTGCTCTGCCTCCTCTaGTGTCCATGCTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GEVGDEGADSCGAWSAVIVLCLL*CPCCRR
Trigger: TCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCAC...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR TCA 72 bp GAAAGACCCTTGAGAGCACTGTATCTCCCACACACCTaGGGCATGTCCTCAGGTAGGGTAAGGAAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: ERPLRALYLPHT*GMSSGRVRKAA
Trigger: AGCTGCCTTCCTTACCCTACCTGAGGACATGCCTCAGGTGTGTGGGAGATACAGTGCTCTCAAGGGTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR CCA 72 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACATCTCCAGGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: GTGEKEGCVGCS*LRCSNTSPGLS
Trigger: GCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
3UTR CCA 72 bp GGGTGGAGACCTTGCCAGGTGAGCATAAACGAAGGATaGAGGGCACTATGGGAAGTGCATGCAGATGACCAA +
Preference number: 3 (lower is better)
Translates to: GWRPCQVSINEG*RALWEVHADDQ
Trigger: TTGGTCATCTGCATGCACTTCCCATAGTGCCCTCCATCCTTCGTTTATGCTCACCTGGCAAGGTCTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CAA 90 bp TGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: CTNITSLFQTPTVLTSPTELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...GGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR TCA 72 bp CAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGCTTTCATCTTGAAACA +
Preference number: 3 (lower is better)
Translates to: QRLPAEVSHRSQ*LRDSSRFHLET
Trigger: TGTTTCAAGATGAAAGCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
3UTR TCA 72 bp CGAAGGATGGAGGGCACTATGGGAAGTGCATGCAGATaGCCAAGAGTTCTAAACTGGGCTGGGAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: RRMEGTMGSACR*PRVLNWAGRKA
Trigger: TGCTTTCCTCCCAGCCCAGTTTAGAACTCTTGGTCATCTGCATGCACTTCCCATAGTGCCCTCCATCCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR-3UTR CAA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 3 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHLIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR CCA 72 bp AAAAGATTCCACTTAAGAGGGCTGCAGGGTACTGAGTaGGCTTCAGTAAGGCCAGAAGGCAGAGGGAACTTC +
Preference number: 3 (lower is better)
Translates to: KRFHLRGLQGTE*ASVRPEGRGNF
Trigger: GAAGTTCCCTCTGCCTTCTGGCCTTACTGAAGCCCACTCAGTACCCTGCAGCCCTCTTAAGTGGAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 72 bp ATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGCCATaGCCAGTTAGTTCAAGGAACAATGTGTTGCGGTAT +
Preference number: 3 (lower is better)
Translates to: ILLNPKPLRRVP*PVSSRNNVLRY
Trigger: ATACCGCAACACATTGTTCCTTGAACTAACTGGGCATGGCACCCTCCTTAGAGGCTTGGGGTTAAGTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR GCA 72 bp CTGAAGAGACAAAGGCTGTTAAGTTTCCTCAGAGAATaGATGAGGGAGTTGTCTAGGGAAACACAGACCTGG +
Preference number: 3 (lower is better)
Translates to: LKRQRLLSFLRE*MRELSRETQTW
Trigger: CCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTCTCTGAGGAAACTTAACAGCCTTTGTCTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 72 bp TCCTATTCCGAGAAGATGGAATCACAGGAATTTTGCTaGCAACAGACGATGAGTTTCAGAACGCACAGTGAG +
Preference number: 3 (lower is better)
Translates to: SYSEKMESQEFC*QQTMSFRTHSE
Trigger: CTCACTGTGCGTTCTGAAACTCATCGTCTGTTGTCAGCAAAATTCCTGTGATTCCATCTTCTCGGAATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
3UTR TCA 72 bp AACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCTaGATGAAGATGTTGGCACGTGTCATTTTAGTGGTT +
Preference number: 3 (lower is better)
Translates to: NCLVLIEFTRSG*MKMLARVILVV
Trigger: AACCACTAAAATGACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR TCA 72 bp GAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTaGATTAAATCCACTAGAGCGAGCTTTAAAACTAAT +
Preference number: 3 (lower is better)
Translates to: EFKVNTTTVDNS*IKSTRASFKTN
Trigger: ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR-3UTR CAA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGTACGGAACAGGAAATaGGTAATGGTAAAATCTAGG +
Preference number: 3 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNVRNRK*VMVKSR
Trigger: CCTAGATTTTACCATTACCAATTTCCTGTTCCGTAC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCCTCTGTGGTTGGCCGTaGCGGGCACCCTCTACCGGG +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPLCGWP*RAPSTG
Trigger: CCCGGTAGAGGGTGCCCGTCACGGCCAACCACAGAG...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTGACTCGCGGTCGCCATaGCAGGTCTGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALDSRSP*QVWGCR
Trigger: CCGGCACCCCCAGACCTGCCATGGCGACCGCGAGTC...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQCPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCACCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGAGCTCTGGGGTGGGCTaGGCCCCAACACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQSSGVG*APTHPV
Trigger: CACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCAGCTCTGGGGTGGGCTaGGCCCCAACACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPSSGVG*APTHPV
Trigger: CACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTGGGGACAACAGTGCCTaGCCCAAGCCCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALGDNSA*PKPLTG
Trigger: CCCAGTGAGGGGCTTGGGTCAGGCACTGTTGTCCCC...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCACTGGTGGCAGGGGGTaGCCGTTCAGTGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPTGGRG*PFSAGD
Trigger: GTCCCCTGCACTGAACGGGCACCCCCTGCCACCAGT...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGACCCAAGCCCCTCACTaGGAGGTAAAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQTQAPH*EVKGLP
Trigger: CGGCAGCCCCTTTACCTCCCAGTGAGGGGCTTGGGT...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
3UTR CAA 72 bp CAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTaGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QACGWVLGSRCH*GKPVAGLVCRG
Trigger: CCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: RPAFCCWNRAEGSPVTQHFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...GTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTGACTCGCGGTCGCCATaGCAGGTCTGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACDSRSP*QVWGCR
Trigger: CCGGCACCCCCAGACCTGCCATGGCGACCGCGAGTC...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCAGCTCTGGGGTGGGCTaGGCCCCAACACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPSSGVG*APTHPV
Trigger: CACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFICPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAACCCAAGCCCCTCACTaGGAGGTAAAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKATQAPH*EVKGLP
Trigger: CGGCAGCCCCTTTACCTCCCAGTGAGGGGCTTGGGT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCACGGACACGGGTCACTaGGGACAGAAGGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPTDTGH*GQKGSI
Trigger: GATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGCCTGGAGGGAGGTCTaGGACTGCCCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWAWREV*DCPAAL
Trigger: GAGGGCTGCAGGGCAGTCCCAGACCTCCCTCCAGGC...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
CDS-3UTR TCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCACTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKALVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
CDS-3UTR TCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp AGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCTGTGTACTCGGGCCGTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: SFPAFTLSHHLGVCVLGPFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...CGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR TCA 90 bp CCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGSCDSFPAFTLSHHLGVSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...GACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR TCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: APQADGQRLTSGRQPFIIPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGCATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWHRAPS*WAPWWR
Trigger: CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATG...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPKRRRR*PRNRRR
Trigger: ACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCGCCCGGCCTTCTGCTaGTGGAACAGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSRPAFC*WNRAEG
Trigger: CCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGTGGTCTCAGGGCAAGTaGCATGACGACAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQWSQGK*HDDSPG
Trigger: CCCTGGACTGTCGTCATGGCACTTGCCCTGAGACCA...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLCPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCGGTGGGGAGGTGCAATaGGATGGGAGGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPGGEVQ*DGRQDA
Trigger: AGCATCCTGCCTCCCATCCCATTGCACCTCCCCACC...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp AGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: RDCAACGAFTGGSSGVGWFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...CCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GHRGGGSHPAVSQSQRPVSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...CACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000674596.1
CDS-3UTR TCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKARVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGCTGAAGGGAGCCCCGTaGCTCAGCACTCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQLKGAP*LSTPRG
Trigger: TCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTCAG...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCAGCCCTGATGCACTCTaGACTTCCAGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPSPDAL*TSRRPA
Trigger: AGCTGGCCTTCTGGAAGTTCAGAGTGCATCAGGGCT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAATGTGGAGGCTGGCGTaGAGGAGCCCGTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAMWRLA*RSPCRK
Trigger: TTTCCTACACGGGCTCCTTCACGCCAGCCTCCACAT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCCCAACTGCGTGTTCCTaGGAGGAAGGGCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPPTACS*EEGPVG
Trigger: TCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGG...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCTGGAGAGGTGGGAGATaGGGGAGCCGATTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPWRGGR*GSRFLW
Trigger: CCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCA...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALQETAS*SPTWPE
Trigger: TTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTG...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000642870.2
CDS-3UTR GCA 90 bp GGGAAGGGTTGGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTGGGACTGCCCGCACCTGTGCCATCGTaGTCCCTCCTGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: GKGWRGLETSLEGGLGLPAPVPS*SLLMGT
Trigger: GGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGC...GGGCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGTGCCCCTCAGGCCGATaGGCAGCGGCTGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQCPSGR*AAADFG
Trigger: CCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGGACCGGGATCTCTGTaGTTGGCCGTGACGGGCACC +
Preference number: 4 (lower is better)
Translates to: RDCAACGAFTGGSSGVGWGPGSL*LAVTGT
Trigger: GGTGCCCGTCACGGCCAACCACAGAGATCCCGGTCC...CCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCCACGGTCTGGTCTCCTaGCAGCTTCCACGGCACAAG +
Preference number: 4 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPHGLVS*QLPRHK
Trigger: CTTGTGCCGTGGAAGCTGCCAGGAGACCAGACCGTG...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGCGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQRGRGG*ETLMGR
Trigger: CCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCG...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: ATHVAPVPSCSLLMGTVVEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...CACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGGGCCTGGGGCTGCCTCGTaGGGTGCGAGGGGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GFREASGPLDVDQGQCPGPGAAS*GARGSC
Trigger: ACAAGAACCCCTCGCACCTCACGAGGCAGCCCCAGG...CCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPELLCNS*PTEGLC
Trigger: GCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAA...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGTGGATGAGGTGGAAGTaGCAGTGTGCCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWWMRWK*QCAGSP
Trigger: TGGGGACCCGGCACACTGTCACTTCCACCTCATCCA...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: QQLTDRGPVPQSHQPDEGVLVPA*AGHLVA
Trigger: GGCAACCAAATGCCCAGCTCACGCGGGCACTAGGAC...GCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCTTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPLVCSY*GHQPGP
Trigger: AGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAA...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGAAGAGGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGACCAGGGCTGGCCCTaGTCCACCTACCTGCTAACT +
Preference number: 4 (lower is better)
Translates to: WKRCSGHGKRQGRGRGGWDQGWP*STYLLT
Trigger: AGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTC...CCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCCAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCGTGGGTGGAGCAGCTTaGAGATCTGAGGAGGCGACC +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSVGGAA*RSEEAT
Trigger: GGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCAC...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR GCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPEGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGCACATGCCATCCTGCTaGACGGTCTGGTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQHMPSC*TVWSPG
Trigger: GCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTG...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGCTGAGACTGGTGGCCTaGACGGGTGTGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQLRLVA*TGVLGE
Trigger: TTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAG...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGCCGGCCTTCTGCTGCTaGAACAGGGCTGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQPAFCC*NRAEGS
Trigger: GCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTGCCAGGAGCCTGTaGTTTCTCTTGGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPFARSL*FLLDPA
Trigger: AGCGGGATCCAAGAGAAACCACAGGCTCCTGGCAAA...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTGCCTGGAGGGAGGTCTaGGACTGCCCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVAWREV*DCPAAL
Trigger: GAGGGCTGCAGGGCAGTCCCAGACCTCCCTCCAGGC...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGCTCCCGCTGCCATTTaGGTAAGCCGGTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGAPAAI*VSRWLV
Trigger: GACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGC...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCTCTGGGCAGCTTGCCTaGTGGATGTTTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPSGQLA*WMFLAL
Trigger: AAGGGCCAGAAACATCCACCAGGCAAGCTGCCCAGA...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CAA 72 bp TCCAGGGCAACATGGGCGAGGCTGGGAGGTGGGGGTTaGCCAGGAGCCTGTGGTTTCTCTTGGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SRATWARLGGGG*PGACGFSWIPL
Trigger: CAGCGGGATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAGCCTCGCCCATGTTGCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGACTGAAGGGAGCCCCGTaGCTCAGCACTCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGLKGAP*LSTPRG
Trigger: TCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTCAG...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGGGGACAACAGTGCCTaGCCCAAGCCCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRGDNSA*PKPLTG
Trigger: CCCAGTGAGGGGCTTGGGTCAGGCACTGTTGTCCCC...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGAAGGGTTGGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTGGGACTGCCCTTTGACAGACAGCCCTaGAGGTGGCTTCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GKGWRGLETSLEGGLGLPFDRQP*RWLPGL
Trigger: AAGGCCGGGAAGCCACCTTCAGGGCTGTCTGTCAAA...GGGCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp GGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACAGGGAAGCGCCACATaGGGGAGGGCCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GGKGAAGTGRHDKPSVLQQGSAT*GRAWPE
Trigger: CTCAGGCCAGGCCCTCCCTCATGTGGCGCTTCCCTG...TTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCCCTTTTGTGAGGTGCTaGGACTGGTGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: QQLTDRGPVPQSHQPDEGPFVRC*DWWPAR
Trigger: CCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGG...GCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSKRRRR*PRNRRR
Trigger: ACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTT...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR GCA 90 bp AGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCTGTGTACTCGGGCCGTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SFPAFTLSHHLGVCVLGPWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...CGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCCATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAACTGGTGGCAGGGGGTaGCCGTTCAGTGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CATADRQRACASEPPTRRTGGRG*PFSAGD
Trigger: GTCCCCTGCACTGAACGGGCACCCCCTGCCACCAGT...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GTAPTHAVPEAALSSPRSCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...GCTCCTGGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLGHAGSEWGLHPLMLFLRREDT*ISRQQR
Trigger: CCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG...CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCGCACCTGTGCCATCGTaGTCCCTCCTGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAAPVPS*SLLMGT
Trigger: GGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGC...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGGAAGGGTTGGAGAGGCCTTGAGACGAGCCTGGAGGGAGGTCTGGGACTGCCCGCTCTGAGTGGGGACTaGACCCACTCATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKGWRGLETSLEGGLGLPALSGD*THSCCS
Trigger: GGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGC...GGGCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGCTGACCACCTaGCAGCCCCTCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: CATADRQRACASEPPTRRGQLTT*QPLSGS
Trigger: GGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCC...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000674596.1
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGGCGGACACAATTCCCTaGGCGGAAGGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQADTIP*AEGDFG
Trigger: CCCGAAGTCCCCTTCCGCCCAGGGAATTGTGTCCGC...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGGCCACCGGAAGTCAGTaGAGGGTTCGGCCGGACGCT +
Preference number: 4 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGATGSQ*RVRPDA
Trigger: AGCGTCCGGCCGAACCCTCCACTGACTTCCGGTGGC...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACGAACGCACAGTGAGTTaGGGGGAGGGCACGGGAGTG +
Preference number: 4 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHERTVS*GEGTGV
Trigger: CACTCCCGTGCCCTCCCCCCAACTCACTGTGCGTTC...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCGAACGCGAGCCGTTGTaGCTCTGGGGGCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGEREPL*LWGLRQ
Trigger: CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTC...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCACATGTGGAGGCTaGCGTGAAGGAGCCCGTGTA +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLGTCGG*REGARV
Trigger: TACACGGGCTCCTTCACGCCAGCCTCCACATGTGCC...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQREARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGGAGGTGCAATGGGATaGGAGGCAGGATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGGGAMG*EAGCLP
Trigger: GGGCAAGCATCCTGCCTCCCATCCCATTGCACCTCC...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTGGAGGTGCAATGGGATaGGAGGCAGGATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVACTGVLGEVLATALYPGGAMG*EAGCLP
Trigger: GGGCAAGCATCCTGCCTCCCATCCCATTGCACCTCC...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTGGTGGGGAGGTGCAATaGGATGGGAGGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: LVACTGVLGEVLATALYPGGEVQ*DGRQDA
Trigger: AGCATCCTGCCTCCCATCCCATTGCACCTCCCCACC...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCCCAATCCTGTGTCTaGGCAGCTTGCCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GAETGGLHGCAGGSASHCPQSCV*AACLVD
Trigger: ATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGG...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
CDS-3UTR TCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
CDS-3UTR TCA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLESRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSWLRCSNTSPGLSGFPRSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...CCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
CDS-3UTR TCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: APQADGQRLTSGRQPFIIRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CAACAGTGCCTGACCCAAGCCCCTCACTGGGAGGTAAAGGGGCTGCCGGGACAGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: QQCLTQAPHWEVKGLPGQRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...CTGTCCCGGCAGCCCCTTTACCTCCCAGTGAGGGGCTTGGGTCAGGCACTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTCTCTGTGGTTGGCCGTaGCGGGCACCCTCTACCGGG +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSLCGWP*RAPSTG
Trigger: CCCGGTAGAGGGTGCCCGTCACGGCCAACCACAGAG...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR TCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACAGAGGTCAGGGTGTTaGGCCAGGGGGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRQRSGC*ARGLTF
Trigger: GAAGGTGAGCCCCCTGGCTCAACACCCTGACCTCTG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGGAGGACAGGAGCAGCTaGGGGTGCTGGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVEDRSS*GCWAFA
Trigger: AGCAAAAGCCCAGCACCCTCAGCTGCTCCTGTCCTC...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGCATTTGGTTGCCCCTaGACCTCAGGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPATATHVAPVPSCSLLMAFGCP*TSGKGG
Trigger: ACCCCCTTTCCCTGAGGTTCAGGGGCAACCAAATGC...CATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLKRRRR*PRNRRR
Trigger: ACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTT...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: APQADGQRLTSGRQPFIIWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLGQRETQVDLGISASAGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCGGCAGGCTGAGGGTCTaGCATCCCCCGGGGTACCTC +
Preference number: 4 (lower is better)
Translates to: SNQALIWEHLWASSYVPGGRLRV*HPPGYL
Trigger: GAGGTACCCCGGGGGATGGCAGACCCTCAGCCTGCC...GCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GCTTGCTGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCTGCCCTGCAGCCCTCTaGTCTCTGTGCAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACCATADRQRACASEPPTCPAAL*SLCKCL
Trigger: CAGGCACTTGCACAGAGAGCAGAGGGCTGCAGGGCA...GGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTTGCCCTGCAGCCCTCTaGTCTCTGTGCAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVACPAAL*SLCKCL
Trigger: CAGGCACTTGCACAGAGAGCAGAGGGCTGCAGGGCA...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWRREDT*ISRQQR
Trigger: CCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGAGGCTTCCTGTGCTCTaGCTCCTCTTGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPERLPVL*LLLCPC
Trigger: GCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGTGGAAGTGACAGTGTaGCGGGTCCCCAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSARTAGLRLGLRLPLPFVEVTV*RVPRGF
Trigger: GAAGCCTCTGGGGACCCGGCACACTGTCACTTCCAC...AAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGAAGCCACCGGCCACTaGCACGCATGTTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: PSARTAGLRLGLRLPLPFEATGH*HACCTC
Trigger: ACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTC...AAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGCCAGAACTGCAGGCCTaGGGCTGGGTCTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLGHAGSEWGLHPLMLFLPELQA*GWVLGS
Trigger: GGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGG...CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCTGTGTCTGGGCAGCTTaGCTGGTGGATGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GAETGGLHGCAGGSASHCCVWAA*LVDVSG
Trigger: GCCAGAAACATCCACCAGGCAAGCTGCCCAGACACA...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: APQADGQRLTSGRQPFIISYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAAGCTCTGGGGTGGGCTaGGCCCCAACACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRSSGVG*APTHPV
Trigger: CACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGACCCAAGCCCCTCACTaGGAGGTAAAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQTQAPH*EVKGLP
Trigger: CGGCAGCCCCTTTACCTCCCAGTGAGGGGCTTGGGT...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGACGGACACGGGTCACTaGGGACAGAAGGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: AGLGQRETQVDLGISASATDTGH*GQKGSI
Trigger: GATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGT...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACTCCTGCTGCACGGTCTaGTCTCCTGGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHSCCTV*SPGSFH
Trigger: GTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGA...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAGAGCCGTTGTGGCTCTaGGGGCTCAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQREPLWL*GLRQVQ
Trigger: CTGCACCTGCCTGAGCCCCCAGAGCCACAACGGCTC...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGCCTGGAGGGAGGTCTaGGACTGCCCTGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSAWREV*DCPAAL
Trigger: GAGGGCTGCAGGGCAGTCCCAGACCTCCCTCCAGGC...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLVEEVL*SREEAR
Trigger: CCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCAC...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTCGGCCTTGTCACTGGTaGAGGCTGCTTTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LVACTGVLGEVLATALYPRPCHW*RLLWMR
Trigger: CCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCG...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTATTTGGGTAAGCCGGTaGCTGGTCTCGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVAIWVSR*LVSSAG
Trigger: CCCGGCAGACGAGACCAGCCACCGGCTTACCCAAAT...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CATCAGTCCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGACTGCAGGCCTGCGGCTaGGTCTTAGGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQSCATGEVGDEGADSCGLQACG*VLGSRC
Trigger: GCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAG...TCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTGGTCTCTGGGCTGCTaGGACATGCAGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LVACTGVLGEVLATALYPWSLGC*DMQALS
Trigger: ACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCA...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTGGTGGTCTCTGGGCTGCTaGGACATGCAGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ASVPTGPWATVPRLRQGWWSLGC*DMQALS
Trigger: ACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCA...CCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CAA 72 bp TCCAGAAGGGCCTGGACAACCTCAGAGGTCAGGGTGTaGAGCCAGGGGGCTCACCTTCCTCTCCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRRAWTTSEVRV*SQGAHLPLLPR
Trigger: CCTTGGCAGGAGAGGAAGGTGAGCCCCCTGGCTCAACACCCTGACCTCTGAGGTTGTCCAGGCCCTTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQLGCDL*DPLLQT
Trigger: GGTCTGGAGGAGGGGATCTCACAGATCACATCCAAG...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461069.6
CDS-3UTR TCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
CDS-3UTR TCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACATTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QPFIIRDCAACGAFTGGSSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...GCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGGGCGAGGCTGGGAGGTGGGGGTTTGCCAGGAGCCTGTGGTTTCTCTTGGATCCTGGTCCATACACGCTaGGCACGATCTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: WARLGGGGLPGACGFSWILVHTR*ARSVAL
Trigger: AAGGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...GATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAGCCTCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGGGAGGCTGCTTTGGATaGGGTGGAAGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQGGCFG*GGSDSV
Trigger: CACACTGTCACTTCCACCTCATCCAAAGCAGCCTCC...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGAGGCTGCTTTGGATaGGGTGGAAGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDGGCFG*GGSDSV
Trigger: CACACTGTCACTTCCACCTCATCCAAAGCAGCCTCC...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGACCTTTTGTGAGGTGCTaGGACTGGTGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: CATADRQRACASEPPTRRPFVRC*DWWPAR
Trigger: CCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGG...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWVLVPA*AGHLVA
Trigger: GGCAACCAAATGCCCAGCTCACGCGGGCACTAGGAC...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATTTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDLVCSY*GHQPGP
Trigger: AGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAA...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: AGLGQRETQVDLGISASAWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTCTTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: VACTGVLGEVLATALYPSWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...AGAAGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp AGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCTGTGTACTCGGGCCGTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SFPAFTLSHHLGVCVLGPFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...CGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR GCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGGGCCTGAGGCTTGTACGTaGACACCACAGGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GFREASGPLDVDQGQCPGPEACT*TPQARG
Trigger: GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGG...CCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCQETAS*SPTWPE
Trigger: TTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTG...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR GCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAGGGCTAGCTCCTATGTaGCTGGCAGGTCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HDTWGTCGGWREGARVGKGLAPM*LAGPRH
Trigger: ATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCC...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGGCCCTCAAATGGGGACAACAGTaGCTGACCCAAGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GLPGQADMTNPLCSNQALKWGQQ*LTQAPH
Trigger: GTGAGGGGCTTGGGTCAGGCACTGTTGTCCCCATTT...GAGGGCCTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCCTGGGGCACCATGTCTaGCGAAAGCTCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WEVKGLPGQADMTNPLCSLGHHV*RKLSGR
Trigger: CCTGCCACTGAGCTTTCGGCAGACATGGTGCCCCAG...GGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTACTGGTGGCAGGGGGTaGCCGTTCAGTGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSTGGRG*PFSAGD
Trigger: GTCCCCTGCACTGAACGGGCACCCCCTGCCACCAGT...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTCAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSARTAGLRLGLRLPLPFQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...AAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTCGGCGGGAGGACACGTaGATCTCCAGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSRREDT*ISRQQR
Trigger: CCTCTGCTGCCTGGAGATGCACGTGTCCTCCCGCCG...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGAGGCTTCCTGTGCTCTaGCTCCTCTTGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: GGASVPTGPWATVPRLRQRLPVL*LLLCPC
Trigger: GCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGCTGAGACTGGTGGCCTaGACGGGTGTGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: CSWLRCSNTSPGLSGFPRLRLVA*TGVLGE
Trigger: TTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAG...CCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCCACTGCCACGCATGTTaGACCTGTGCCATCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAHCHAC*TCAIVL
Trigger: GAGCACGATGGCACAGGTGCAACATGCGTGGCAGTG...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCGTGGCTGGTCTCGTCTaGCGGGGGAAGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WDALGYAAVTHLQVSAASVAGLV*RGKGGE
Trigger: CTCCCCACCCTTCCCCCGGCAGACGAGACCAGCCAC...GGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGTGTGTCTGGGCAGCTTaGCTGGTGGATGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQCVWAA*LVDVSG
Trigger: GCCAGAAACATCCACCAGGCAAGCTGCCCAGACACA...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DGHRGGGSHPAVSQSQRPSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...CGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPEVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: APQADGQRLTSGRQPFIIGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGACCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACGTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTGGGGACCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: HVEEEGDKALRTDTGHWGPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...TCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LCAPTRPSSGNICGLAPMHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...CATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGGCGAGGCTGGGAGGTGGGGGTTTGCCAGGAGCCTGTGGTTTCTCTTGGATCAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WARLGGGGLPGACGFSWIRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...GATCCAAGAGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAGCCTCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCAGGTCCCCTTGATGTaGACCAAGGCCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGQVPLM*TKASAL
Trigger: CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTG...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPASKGS*VFLVPN
Trigger: GTTTGGGACCAAGAACACCCATGAACCCTTAGAAGC...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR CCA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACGCCCTTTTACAGGCGTaGCCACTAGCCCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHALLQA*PLALMH
Trigger: GTGCATCAGGGCTAGTGGCCACGCCTGTAAAAGGGC...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACTTGCCAAGGGAGGCTaGTGGCCAGAAGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRLAKGG*WPEAWL
Trigger: CAGCCATGCTTCTGGCCACCAGCCTCCCTTGGCAAG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTCGTCCCATGACACGTaGGGCACATGTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGSSHDT*GTCGGW
Trigger: CCAGCCTCCACATGTGCCCCACGTGTCATGGGACGA...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCAGAGGAAGGGCCTGTTaGAGCCACTGGTTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: GTAPTHAVPEAALSSPRSRGRAC*SHWFLG
Trigger: ACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCT...GCTCCTGGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGCCCCAATCCTGTGTCTaGGCAGCTTGCCTGGTGGAT +
Preference number: 4 (lower is better)
Translates to: DGHRGGGSHPAVSQSQRPPQSCV*AACLVD
Trigger: ATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGG...CGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp ATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCAGGCTAAGACAGGGGTaGGGGGCTAAGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: MGGRMLAQKGAFLQTVQGRLRQG*GAKGPG
Trigger: CCCTGGTCCCTTAGCCCCCCACCCCTGTCTTAGCCT...GCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CAA 72 bp CACAGGCTAGAGGCTTCAGGGAAGCTTCAGGTCCCCTaGATGTGGACCAAGGCCAGTGCCCTGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRLEASGKLQVP*MWTKASALGEV
Trigger: CACCTCACCCAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTCTAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYLGCDL*DPLLQT
Trigger: GGTCTGGAGGAGGGGATCTCACAGATCACATCCAAG...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGCTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQLGCDL*DPLLQT
Trigger: GGTCTGGAGGAGGGGATCTCACAGATCACATCCAAG...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGGCCCTCCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLPGQADMTNPLCSNQALLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...GAGGGCCTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LCAPTRPSSGNICGLAPMSRPSP*ATTLGS
Trigger: AGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGA...CATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAAGCAGCTTGCAGATCTaGGGAGGCGACCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGSSLQI*GGDQAQ
Trigger: TTGTGCCTGGTCGCCTCCTCAGATCTGCAAGCTGCT...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR TCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTGAGAGAGACCCAGGTTaGTCTGGGAATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCERDPG*SGNLSL
Trigger: GAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTC...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCAGCTTCAGGTCCCCTTaGTGTGGACCAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGSFRSP*CGPRPV
Trigger: CACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCT...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGTGGACAAATGGGGCCTaGGGCTTGTACGTGCACACC +
Preference number: 4 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGWTNGA*GLYVHT
Trigger: GGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCA...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGAGGGAGGGCCTGGCCTaGGGGAGGGATGCCTCAATC +
Preference number: 4 (lower is better)
Translates to: LCAPTRPSSGNICGLAPMREGLA*GRDASI
Trigger: GATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCCCT...CATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGGCATTTGGTTGCCCCTaGACCTCAGGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQRAFGCP*TSGKGG
Trigger: ACCCCCTTTCCCTGAGGTTCAGGGGCAACCAAATGC...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGGTCCTAGTGCCCGCGTaGGCTGGGCATTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRVLVPA*AGHLVA
Trigger: GGCAACCAAATGCCCAGCTCACGCGGGCACTAGGAC...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAACATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQHRAPS*WAPWWR
Trigger: CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATG...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGGGACATGCAGGCTCTaGGTGGGGACTGCACCCACT +
Preference number: 4 (lower is better)
Translates to: WHRPSRVHVPVAHCTDHEGTCRL*VGTAPT
Trigger: AGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCC...TTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGCCCTGAAGGTGGCTTaGCTTCCCGGCCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLALKVA*LPGLHP
Trigger: AGGGTGAAGGCCGGGAAGTCAAGCCACCTTCAGGGC...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GGAGGGCCTGGCCTGAGGGAGGGATGCCTCAATCCAGACTTTGGAGGCAGTGCCGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGPGLREGCLNPDFGGSAEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...GGCACTGCCTCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCCTGAGGCTTGTACGTaGACACCACAGGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGPEACT*TPQARG
Trigger: GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGG...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CAGCTGAGGGTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTGGGGCACACCTGAGGCTTGTACGTaGACACCACAGGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLRVLGFCSVSSHDTWGTPEACT*TPQARG
Trigger: GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGG...TGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCTGTTCCATTGGTGCCTaGAATACCCCTAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAETGGLHGCAGGSASHCCSIGA*NTPRSQ
Trigger: CTGGCTTCTAGGGGTATTGCAGGCACCAATGGAACA...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR GCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGAGCTCCCATCCCACATaGCATCCTGCTGCACGGTCT +
Preference number: 4 (lower is better)
Translates to: EASGKLQVPLMWTKASALSSHPT*HPAARS
Trigger: AGACCGTGCAGCAGGATGGCATGTGGGATGGGAGCT...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGCTCACCTTCCTCTCCTaGCAAGGGGCTGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: EASGKLQVPLMWTKASALLTFLS*QGAARK
Trigger: CTTTCTGGCAGCCCCTTGGCAGGAGAGGAAGGTGAG...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp TATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGTGGGAGGTGGGGGTTTaGCAGGAGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: YQRLCSLWSLHWGKLWGGWEVGV*QEPVVS
Trigger: AGAAACCACAGGCTCCTGGCAAACCCCCACCTCCCA...CCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTGAGACTGGTGGCCTaGACGGGTGTGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPLRLVA*TGVLGE
Trigger: TTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAG...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCTTGCTGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCGGGAGGCAGGATGCTTaGCCAGAAAGGTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ACCATADRQRACASEPPTGRQDA*PERCFP
Trigger: AGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCC...GGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGGCTGGTCTCGTCTaGCGGGGGAAGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSVAGLV*RGKGGE
Trigger: CTCCCCACCCTTCCCCCGGCAGACGAGACCAGCCAC...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCCAGAACTGCAGGCCTaGGGCTGGGTCTTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPPELQA*GWVLGS
Trigger: GGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGG...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGGGCAGCTGACCACCTaGCAGCCCCTCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: AVTHLQVSAASRGSFSQKGQLTT*QPLSGS
Trigger: GGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCC...CTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGGACTCGCGGTCGCCATaGCAGGTCTGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARDSRSP*QVWGCR
Trigger: CCGGCACCCCCAGACCTGCCATGGCGACCGCGAGTC...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR CCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EASGKLQVPLMWTKASALSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGASVPTGPWATVPRLRQVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000674596.1
CDS-3UTR CCA 90 bp TTTCCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGACAGGCTGGACAAATaGGGCCTGAGGCTTGTACGT +
Preference number: 4 (lower is better)
Translates to: FPGSCDSFPAFTLSHHLGDRLDK*GLRLVR
Trigger: ACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC...CCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp TCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTCAGGACCGGGATCTCTGTaGTTGGCCGTGACGGGCACC +
Preference number: 4 (lower is better)
Translates to: SPGLSGFPRKFLTEVSDSGPGSL*LAVTGT
Trigger: GGTGCCCGTCACGGCCAACCACAGAGATCCCGGTCC...TGAGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp CATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTGCCACCGGAAGTCAGTaGAGGGTTCGGCCGGACGCT +
Preference number: 4 (lower is better)
Translates to: HLQVSAASRGSFSQKSVTATGSQ*RVRPDA
Trigger: AGCGTCCGGCCGAACCCTCCACTGACTTCCGGTGGC...AGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp GGAGGGCCTGGCCTGAGGGAGGGATGCCTCAATCCAGACTTTGGAGGCAGTGCCAACCAGGCCCTCATCTaGGAACATTTGTGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: GGPGLREGCLNPDFGGSANQALI*EHLWAS
Trigger: GCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTT...GGCACTGCCTCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCCAGGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCATTGAGTGGCAGAACCTaGTTATGTCAAAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WPPGCPSGRWAAADFGKALSGRT*LCQSSH
Trigger: ATGGGAGCTTTGACATAACCAGGTTCTGCCACTCAA...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GAGGCTTCAGGGAAGCTTCAGGTCCCCTTGATGTGGACCAAGGCCAGTGCCCTGGCTTCCAGAAGGGCCTaGACAACCTCAGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EASGKLQVPLMWTKASALASRRA*TTSEVR
Trigger: CCTGACCTCTGAGGTTGTCCAGGCCCTTCTGGAAGC...CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCTTCCCTGAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGACCGCACATGGGGAGTaGGAGGAAAAAGATTCCACT +
Preference number: 4 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQTAHGE*EEKDST
Trigger: AGTGGAATCTTTTTCCTCCCACTCCCCATGTGCGGT...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACGCTTGGAGGGCCTGGTaGTTTGAAGAGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHAWRAW*FEEHRE
Trigger: TTCCCTGTGCTCTTCAAACCACCAGGCCCTCCAAGC...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGACCTGGGCCATGGATGGAACGCGAGCCGTTGTGGCTCTGGGGGCTCAGGCAGCCAAGAGTTCTAAACTaGGCTGGGAGGAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RPGPWMEREPLWLWGLRQPRVLN*AGRKAR
Trigger: CCTTGCTTTCCTCCCAGCCCAGTTTAGAACTCTTGG...CTGCCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGTGGCTGTCACCAGGGTaGAGACCTTGCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VKGLPGQADMTNPLCSNQWLSPG*RPCQVS
Trigger: GCTCACCTGGCAAGGTCTCCACCCTGGTGACAGCCA...CTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACACAGACCTGGGCCATaGATGGAACGCGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GGKGAAGTGRHDKPSVLQHRPGP*MEREPL
Trigger: CAACGGCTCGCGTTCCATCCATGGCCCAGGTCTGTG...TTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGCAGCTAATGTGGGGTaGTTGTGGGAACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLAANVG*LWEQKG
Trigger: TCCCTTCTGTTCCCACAACCACCCCACATTAGCTGC...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLEARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCCAAGTGCCTGGCTCCTaGTGTCCACCCAAGGATAAG +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVAQVPGS*CPPKDK
Trigger: CTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTG...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAACGAGGCAGAGGCGGCTaGGAGACCCTGATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQRGRGG*ETLMGR
Trigger: CCTTCCCATCAGGGTCTCCCAGCCGCCTCTGCCTCG...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGCCTGTTGGAGCCACTaGTTCTTAGGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVAACWSH*FLGGLL
Trigger: CAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp ACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGCAGAGAGGAAGGGCCTGTTaGAGCCACTGGTTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: TADRQRACASEPPTRRGQRGRAC*SHWFLG
Trigger: ACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCT...CTGCCCTCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: GCVGCSWLRCSNTSPGLSEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...GCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTGAGGGAGGGAGTGCGTaGAGCTGCCCAGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLEGGSA*SCPANC
Trigger: GCAGTTGGCTGGGCAGCTCCACGCACTCCCTCCCTC...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAAGACGGTGCAGGGCCTaGGCCAGCCTTACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLRRCRA*ASLTGQ
Trigger: CTGACCTGTAAGGCTGGCCCAGGCCCTGCACCGTCT...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGGGCAGCTTGCCTGGTaGATGTTTCTGGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLGQLAW*MFLALF
Trigger: AAAAAGGGCCAGAAACATCCACCAGGCAAGCTGCCC...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGTGCCCACGGGTCCCTaGGCAACAGTCCCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLVPTGP*ATVPRL
Trigger: TAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCAC...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
3UTR CAA 72 bp CCTCTTAATGCGGCCTTGTCACTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACAGTGTGCCGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLNAALSLVEAA*DEVEVTVCRVP
Trigger: GGGGACCCGGCACACTGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TTTCCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPGSCDSFPAFTLSHHLGLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR TCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCATTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CACGTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTGGGGAAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: HVEEEGDKALRTDTGHWGRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...TCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: VKGLPGQADMTNPLCSNQRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...CTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCCGATGGGCAGCGGCTaGCTTCGGGAAGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHPMGSG*LREGSP
Trigger: AGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CATGACACGTGGGGCACATGTGGAGGCTGGCGTGAAGGAGCCCGTGTAGGAAAAAGCTTCAGGTCCCCTTaGTGTGGACCAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HDTWGTCGGWREGARVGKSFRSP*CGPRPV
Trigger: CACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCT...TTTTCCTACACGGGCTCCTTCACGCCAGCCTCCACATGTGCCCCACGTGTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCAGAGGGCCTGGTGGTTTaGAGAGCACAGGGAAGCGCC +
Preference number: 4 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSEGLVV*RAQGSA
Trigger: GGCGCTTCCCTGTGCTCTTCAAACCACCAGGCCCTC...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCCACTGCCTGTCAGCTaGGGCAACAGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFPLPVS*GNRGRE
Trigger: CTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGG...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGCCACTGCCTGTCAGCTaGGGCAACAGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVPLPVS*GNRGRE
Trigger: CTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGG...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp ACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCAGAGGCGTGCCTTTTGTaGGGTGCTGAGACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGHPECMSLLPTALIMKPEACLL*GAETGG
Trigger: GCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTC...TGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGGAGGCGTGCCTTTTGTaGGGTGCTGAGACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPEACLL*GAETGG
Trigger: GCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTC...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CATCAGTCCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGAGGCGTGCCTTTTGTaGGGTGCTGAGACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HQSCATGEVGDEGADSCGEACLL*GAETGG
Trigger: GCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTC...TCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTCATCGTGCTCCCTCCTaGTGGGCACCGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVIHRAPS*WAPWWR
Trigger: CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATG...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCTTTGAGGCCCCAACATaGCAGCCACTGGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLFEAPT*QPLGHR
Trigger: CCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAA...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCACTCATGCTGTTCCTaGGGCCGCCCTCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFHSCCS*GRPLQS
Trigger: GGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTG...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGCACTCATGCTGTTCCTaGGGCCGCCCTCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GVWDALGYAAVTHLQVSAHSCCS*GRPLQS
Trigger: GGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTG...CGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGGACCAGGGCTGGCCCTaGTCCACCTACCTGCTAACT +
Preference number: 4 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGDQGWP*STYLLT
Trigger: AGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTC...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLEKRRRR*PRNRRR
Trigger: ACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTT...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp CACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: HQAAPQADGQRLTSGRQPTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...GGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGAAATGGGGACAACAGTaGCTGACCCAAGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQKWGQQ*LTQAPH
Trigger: GTGAGGGGCTTGGGTCAGGCACTGTTGTCCCCATTT...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAATGCTGAAGGGGCTCTaGTTCCAGAAGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LIWEHLWASSYVPGRSPAMLKGL*FQKGLD
Trigger: GTCCAGGCCCTTCTGGAAGCAGAGCCCCTTCAGCAT...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAGGGTGCTGGGCTTTTaGTCTGTGTCGTCCCATGAC +
Preference number: 4 (lower is better)
Translates to: WEVKGLPGQADMTNPLCSRVLGF*SVSSHD
Trigger: GTCATGGGACGACACAGAGCAAAAGCCCAGCACCCT...GGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTCTCTTGTGTCCATGCTaGAGAAGAGCTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVALLCPC*RRAALG
Trigger: TCCCAGAGCAGCTCTTCTGCAGCATGGACACAAGAG...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGCTCCTCTTGTGTCCATaGTGCAGAAGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGHRGGGSHPAVSQSQRPLLLCP*CRRAAL
Trigger: CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAG...CGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTCTTCTTCATCAGTCCTGTaGCACTGGAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VACTGVLGEVLATALYPSSSSVL*HWRGGR
Trigger: TCTCCCACCTCTCCAGTGGCACAGGACTGATGAAGA...AGAAGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGGCTTGCCCAGAAAGGTaGTTTCCTTCAGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: VSGLLGHAGSEWGLHPLMACPER*FPSDGA
Trigger: TGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGC...CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGTGCAACAGCTGACCGACAGAGGGCCTGTGCCTCAGAGCCACCAACCAGACGAGGGAGGCAGGATGCTTaGCCAGAAAGGTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CATADRQRACASEPPTRRGRQDA*PERCFP
Trigger: AGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCC...TCGTCTGGTTGGTGGCTCTGAGGCACAGGCCCTCTGTCGGTCAGCTGTTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAGACTCGCGGTCGCCATaGCAGGTCTGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: NGTSIHPVDQEGLGLWVQDSRSP*QVWGCR
Trigger: CCGGCACCCCCAGACCTGCCATGGCGACCGCGAGTC...TTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TTTCCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FPGSCDSFPAFTLSHHLGEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...CCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGLGQRETQVDLGISASAEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: RGFLCSASSCVHAAEELLVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCACTGGGGGAAGCTCTaGGGTGGGCTGGGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHHWGKL*GGLGPN
Trigger: GTTGGGGCCCAGCCCACCCCAGAGCTTCCCCCAGTG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVGEVRP*TEKTAF
Trigger: GAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACC...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTGCGGACACAATTCCCTaGGCGGAAGGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFADTIP*AEGDFG
Trigger: CCCGAAGTCCCCTTCCGCCCAGGGAATTGTGTCCGC...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGCATTCCCAGAGCTCCTaGGACCAAGCAAATGGCGGA +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQHSQSS*DQANGG
Trigger: TCCGCCATTTGCTTGGTCCCAGGAGCTCTGGGAATG...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSSCSPT*PEAAER
Trigger: CCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCT...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: GAETGGLHGCAGGSASHCCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 4 (lower is better)
Translates to: GTAPTHAVPEAALSSPRSRKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...GCTCCTGGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGCAGCATCAGCCAGGCTaGGCTTCCCGGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWQHQPG*ASRPSP
Trigger: GGGTGAAGGCCGGGAAGCCCAGCCTGGCTGATGCTG...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646248.1
CDS-3UTR CCA 90 bp GTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGGCTGAGCACGATCTGTaGCCCTTTTACAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VKGLPGQADMTNPLCSNQAEHDL*PFYRRG
Trigger: GCCACGCCTGTAAAAGGGCCACAGATCGTGCTCAGC...CTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACGGGCTGCCAGAAAGCTaGACCCCAGCCAGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHGLPES*TPASGL
Trigger: GAGGCCGCTGGCTGGGGTCCAGCTTTCTGGCAGCCC...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCACAACATGGGCGAGGCTaGGAGGTGGGGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSQHGRG*EVGVCQ
Trigger: CTGGCAAACCCCCACCTCCCAGCCTCGCCCATGTTG...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTGAGGGTCGGCCCAGATaGTCTCAGGGCAAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFEGRPR*SQGKCH
Trigger: ATGGCACTTGCCCTGAGACCATCTGGGCCGACCCTC...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGGAGGCTAGGGACTGGTaGCAGGGGGTGCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: RWEMREPILVELGLQLLREARDW*QGVPVQ
Trigger: CTGAACGGGCACCCCCTGCCACCAGTCCCTAGCCTC...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWVEEVL*SREEAR
Trigger: CCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCAC...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATATTTGGGTAAGCCGGTaGCTGGTCTCGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: FWHRPSRVHVPVAHCTDHIWVSR*LVSSAG
Trigger: CCCGGCAGACGAGACCAGCCACCGGCTTACCCAAAT...ATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCGCTCCCGCTGCCATTTaGGTAAGCCGGTGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLAPAAI*VSRWLV
Trigger: GACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGC...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGAGGCTAAGACAGGGGTaGGGGGCTAAGGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GVWDALGYAAVTHLQVSARLRQG*GAKGPG
Trigger: CCCTGGTCCCTTAGCCCCCCACCCCTGTCTTAGCCT...CGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGGTGCCCACGGGTCCCTaGGCAACAGTCCCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: RCNGMGGRMLAQKGAFLQVPTGP*ATVPRL
Trigger: TAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCAC...CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AVTHLQVSAASRGSFSQKLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGTTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp GAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACATTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: EWDIHSSSRSGGAGVMGTFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...TGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR TCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACATTTGTGCCGGCCAGGTaGGAAGGGCACGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTFVPAR*EGHVHG
Trigger: GCCGTGCACGTGCCCTTCTCACCTGGCCGGCACAAA...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAGAGAGAGACCCAGGTTaGTCTGGGAATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LIWEHLWASSYVPGRSPAERDPG*SGNLSL
Trigger: GAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTC...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCATGGACAAATGGGGCCTaGGGCTTGTACGTGCACACC +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASWTNGA*GLYVHT
Trigger: GGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCA...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp ACTGAGTGGGCTTCAGTAAGGCCAGAAGGCAGAGGGAACTTCCTATTCCGAGAAGGGGACAACAGTGCCTaGCCCAAGCCCCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: TEWASVRPEGRGNFLFREGDNSA*PKPLTG
Trigger: CCCAGTGAGGGGCTTGGGTCAGGCACTGTTGTCCCC...TTCTCGGAATAGGAAGTTCCCTCTGCCTTCTGGCCTTACTGAAGCCCACTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTTTGACAGACAGCCCTaGAGGTGGCTTCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFFDRQP*RWLPGL
Trigger: AAGGCCGGGAAGCCACCTTCAGGGCTGTCTGTCAAA...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
CDS-3UTR TCA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATAAACACTGCTATCTTTaGCAGACAGCCCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDKHCYL*QTALKV
Trigger: CACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTT...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp ACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACTGGTCCATACACGCTaGGCACGATCTGTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TGHPECMSLLPTALIMKPLVHTR*ARSVAL
Trigger: AAGGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...TGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp GCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: ATHVAPVPSCSLLMGTVVISRQA*LRARRL
Trigger: TAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTAT...CACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GVWDALGYAAVTHLQVSALLCNS*PTEGLC
Trigger: GCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAA...CGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCACCACTGCCTGTCAGCTaGGGCAACAGAGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSPLPVS*GNRGRE
Trigger: CTCCCTCCCTCTGTTGCCTCAGCTGACAGGCAGTGG...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGTGGATGAGGTGGAAGTaGCAGTGTGCCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GVWDALGYAAVTHLQVSAWMRWK*QCAGSP
Trigger: TGGGGACCCGGCACACTGTCACTTCCACCTCATCCA...CGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTCCTTTTGTGAGGTGCTaGGACTGGTGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSPFVRC*DWWPAR
Trigger: CCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGG...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGCATTTGGTTGCCCCTaGACCTCAGGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSAFGCP*TSGKGG
Trigger: ACCCCCTTTCCCTGAGGTTCAGGGGCAACCAAATGC...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGATTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLGHAGSEWGLHPLMLFLFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIREVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGCATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCGCCCGGCCTTCTGCTaGTGGAACAGGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARRPAFC*WNRAEG
Trigger: CCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGGTGGGTGGAGCAGCTTaGAGATCTTGTAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQVGGAA*RSCKLL
Trigger: CAGAAGTTTACAAGATCTGCAAGCTGCTCCACCCAC...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS-3UTR GCA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGTGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGASVPTGPWATVPRLRQCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGTGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTGAAGGGTGTGTGGGATaGTCTTGGTTACGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVEGCVG*SWLRCS
Trigger: ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCTAAGGAGGGTGCCATaGCCAGTTAGTTCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCLRRVP*PVSSRN
Trigger: GTTCCTTGAACTAACTGGGCATGGCACCCTCCTTAG...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTGTGGAAGTGACAGTGTaGCGGGTCCCCAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFVEVTV*RVPRGF
Trigger: GAAGCCTCTGGGGACCCGGCACACTGTCACTTCCAC...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCGTGGAAGTGACAGTGTaGCGGGTCCCCAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLVEVTV*RVPRGF
Trigger: GAAGCCTCTGGGGACCCGGCACACTGTCACTTCCAC...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGGAAGCCACCGGCCACTaGCACGCATGTTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVEATGH*HACCTC
Trigger: ACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTC...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGAAGAAGACAGCCCCCTaGCCCATCTTCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SWLRCSNTSPGLSGFPRKKKTAP*PIFWHR
Trigger: CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTT...CTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CATCAGTCCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAAAGAAGACAGCCCCCTaGCCCATCTTCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: HQSCATGEVGDEGADSCGKKTAP*PIFWHR
Trigger: CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTT...TCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGGACTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTGTCTTAGGCTCCCGCTaGCATTTGGGTAAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSVLGSR*HLGKPV
Trigger: CACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGAC...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAAGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGKGAAGTGRHDKPSVLQGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...TTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLEGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp ATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: MGGRMLAQKGAFLQTVQGGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...GCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGTCTATTTGTCCTCAGTaGGTGGAGCAGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQSICPQ*VEQLAD
Trigger: ATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGA...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGTCTATTTGTCCTCAGTaGGTGGAGCAGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQSICPQ*VEQLAD
Trigger: ATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGA...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCCCGGCCTTCTGCTGCTaGAACAGGGCTGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGPAFCC*NRAEGS
Trigger: GCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAGACAGGCTGGACAAATaGGGCCTGAGGCTTGTACGT +
Preference number: 4 (lower is better)
Translates to: LIWEHLWASSYVPGRSPADRLDK*GLRLVR
Trigger: ACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LHYQRLCSLWSLHWGKLWSCSPT*PEAAER
Trigger: CCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCT...CCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp CTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: LVACTGVLGEVLATALYPCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...AGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGCCCTTTTACAGGCGTaGCCACTAGCCCTGATGCAC +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSALLQA*PLALMH
Trigger: GTGCATCAGGGCTAGTGGCCACGCCTGTAAAAGGGC...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CCA 90 bp TGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCTGAGCACGATCTGTaGCCCTTTTACAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WHRPSRVHVPVAHCTDHEAEHDL*PFYRRG
Trigger: GCCACGCCTGTAAAAGGGCCACAGATCGTGCTCAGC...TTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACGCCTTGAGACGAGCCTaGAGGGAGGTCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNALRRA*REVWDC
Trigger: GCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGC...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGCCTTGAGACGAGCCTaGAGGGAGGTCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVALRRA*REVWDC
Trigger: GCAGTCCCAGACCTCCCTCCAGGCTCGTCTCAAGGC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp ACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: TGHPECMSLLPTALIMKPPDGKG*RGLETS
Trigger: GCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGG...TGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSPDGKG*RGLETS
Trigger: GCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGG...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCCACTGGTTCTTAGGTaGCTTGCTGTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: CMSLLPTALIMKPPATATPLVLR*LAVQQL
Trigger: CAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGG...CGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGGCCTGTTGGAGCCACTaGTTCTTAGGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWACWSH*FLGGLL
Trigger: CAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGCGGCCTTGTCACTGGTaGAGGCTGCTTTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRRRPCHW*RLLWMR
Trigger: CCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCG...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACACGTGAGCTGGGCATTTaGTTGCCCCTGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTRELGI*LPLNLR
Trigger: CCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACG...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGACTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LCAPTRPSSGNICGLAPMRVTKP*ERTRVT
Trigger: AGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCT...CATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCAGTATTTCCCAGCTGCTaGCAGGCTGGACAAATGGGG +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASVFPSC*QAGQMG
Trigger: CCCCATTTGTCCAGCCTGTCAGCAGCTGGGAAATAC...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTAAACACTGCTATCTTTaGCAGACAGCCCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVAKHCYL*QTALKV
Trigger: CACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTT...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: EASCALPPLVSMLQKSCSSHRSQ*LRDSSR
Trigger: GCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGA...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACCAACTGCGTGTTCCTaGGAGGAAGGGCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: YAAVTHLQVSAASRGSFSPTACS*EEGPVG
Trigger: TCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGG...TGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTATTGGTCTGCAGTTATTaGGGCCACCAGCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLLVCSY*GHQPGP
Trigger: AGGACCAGGCTGGTGGCCTCAATAACTGCAGACCAA...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAATGGAGAGGTGGGAGATaGGGGAGCCGATTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQWRGGR*GSRFLW
Trigger: CCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCA...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTTATCATTTGTACCATaGTGCGGTTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPELSFVP*CGFWLC
Trigger: ACACAGCCAGAAACCGCATCATGGTACAAATGATAA...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCTTATCATTTGTACCATaGTGCGGTTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GAETGGLHGCAGGSASHCLSFVP*CGFWLC
Trigger: ACACAGCCAGAAACCGCATCATGGTACAAATGATAA...GCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTTGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCATTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LIWEHLWASSYVPGRSPAFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQREVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EGCVGCSWLRCSNTSPGLGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...GAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: PGCPSGRWAAADFGKAALQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000674596.1
CDS-3UTR GCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGACAAAACTATTCTGTGTaGCCCCAGCTCTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRQNYSV*PQLWPP
Trigger: TGGTGGCCAGAGCTGGGGGCACACAGAATAGTTTTG...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAAGAGTTTTTCCTCTaGTCCCTCAGACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: PAFCCWNRAEGSPVTQHSQEFFL*SLRHKD
Trigger: ATCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTG...GGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLQETAS*SPTWPE
Trigger: TTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTG...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000674596.1
CDS-3UTR GCA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LIWEHLWASSYVPGRSPAMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: CSNTSPGLSGFPRKFLTEGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...TTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGGGGTGCCCGTTCAGTaGAGGGGACAGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVIGVPVQ*RGQERK
Trigger: CTTTCTCTCCTGTCCCCTGCACTGAACGGGCACCCC...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCAGGCCTGAGGGAGGGATaGCTCAATCCAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASGLREG*LNPDFG
Trigger: TCCAAAGTCTGGATTGAGGCATCCCTCCCTCAGGCC...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp ACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTTGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TGEVGDEGADSCGAWSAVCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...AACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGCTGCCCAGCCAACTaGGTGTTCCTGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSSCPAN*VFLRGR
Trigger: CCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCT...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCCACTGCCACGCATGTTaGACCTGTGCCATCGTGCTC +
Preference number: 4 (lower is better)
Translates to: GCVGCSWLRCSNTSPGLSHCHAC*TCAIVL
Trigger: GAGCACGATGGCACAGGTGCAACATGCGTGGCAGTG...GCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTACAGGCCATCCCGAGTaGATGTCCCTGTTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SPSLVPEDYPSHRHRRDLTGHPE*MSLLPT
Trigger: AGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT...AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGCTCTGAGTGGGGACTaGACCCACTCATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: AVTHLQVSAASRGSFSQKALSGD*THSCCS
Trigger: GGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGC...CTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGGCACAGGGTAAAATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: RAQGKIARPSAAGTGLKGACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATTTTACCCTGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CAGCTGAGGGTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTGGGGCACAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: QLRVLGFCSVSSHDTWGTACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSGRWAAADFGKAALHYQILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: AAPQADGQRLTSGRQPFIFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHYQRLCSLWSLHWGKLWRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...CCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCTGTGTACTCGGGCCGGTAAAATCTAGGTGGTaGGTATGTGGTGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: SFPAFTLSHHLGVCVLGPVKSRW*VCGVHC
Trigger: ACAGTGAACACCACATACCCACCACCTAGATTTTAC...CGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATATCTGGGAACATTTGTaGGCTAGCTCCTATGTGCCT +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYIWEHL*ASSYVP
Trigger: AGGCACATAGGAGCTAGCCCACAAATGTTCCCAGAT...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAAACCAGGCCCTCATCTaGGAACATTTGTGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRNQALI*EHLWAS
Trigger: GCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTT...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TCAGGGAAAGGGGGTGGGAGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 4 (lower is better)
Translates to: SGKGGGRRAFCEVLRLVARKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...GGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCTCCCACCCCCTTTCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 4 (lower is better)
Translates to: HRGGGSHPAVSQSQRPVARKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...AGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCTGCCGAAAGCTCAGTaGCAGGGCAGAGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHLPKAQ*QGREGL
Trigger: CAGGCCCTCTCTGCCCTGCCACTGAGCTTTCGGCAG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGGCTGGGCCAGGAGCTTaGAGGGCCTGGTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWAGPGA*RAWWFE
Trigger: TTCAAACCACCAGGCCCTCCAAGCTCCTGGCCCAGC...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGAGGGTGCTGGAGGCCTGAAGAGACAAAGGCTGTTAAGTTTCCTCAGAGAATGGACCTGGGCCATGGATaGAACGCGAGCCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGCWRPEETKAVKFPQRMDLGHG*NASRCG
Trigger: GCCACAACGGCTCGCGTTCCATCCATGGCCCAGGTC...CATTCTCTGAGGAAACTTAACAGCCTTTGTCTCTTCAGGCCTCCAGCACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTATAGCTGTGATAAAATaGGGCAGAGGACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSGVGWAPTHPVYQKAQCIAVIK*GRGQEQ
Trigger: CTGCTCCTGTCCTCTGCCCCATTTTATCACAGCTAT...ACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCAAGTGCCTGGCTCCTaGTGTCCACCCAAGGATAAG +
Preference number: 4 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPQVPGS*CPPKDK
Trigger: CTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTG...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTCAAGTGCCTGGCTCCTaGTGTCCACCCAAGGATAAG +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSQVPGS*CPPKDK
Trigger: CTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTG...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCCTGATGGGAAGGGTTaGAGAGGCCTTGAGACGAGC +
Preference number: 4 (lower is better)
Translates to: WDALGYAAVTHLQVSAASPDGKG*RGLETS
Trigger: GCTCGTCTCAAGGCCTCTCCAACCCTTCCCATCAGG...GGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGGTGGAAGAGGTGCTCTaGTCACGGGAAGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVVEEVL*SREEAR
Trigger: CCTTGCCTCTTCCCGTGACCAGAGCACCTCTTCCAC...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGCCACTGGTTCTTAGGTaGCTTGCTGTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWPLVLR*LAVQQL
Trigger: CAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGG...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTCACGGCCTTGTCACTGGTaGAGGCTGCTTTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPGLSGFPRKFLTEVSDSRPCHW*RLLWMR
Trigger: CCTCATCCAAAGCAGCCTCCACCAGTGACAAGGCCG...TGAGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGCGTGAGCTGGGCATTTaGTTGCCCCTGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVRELGI*LPLNLR
Trigger: CCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACG...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTGGGAGCCGATTCTTGTaGAGCTTGGTCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVGSRFL*SLVCSY
Trigger: ATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCC...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAACAACATGACAGCCACTaGGCCACCGGGACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQQHDSH*ATGTQE
Trigger: TTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTG...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTCATGCAGGCTCTGAGTaGGGACTGCACCCACTCATG +
Preference number: 4 (lower is better)
Translates to: HLQVSAASRGSFSQKSVTHAGSE*GLHPLM
Trigger: CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATG...AGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCAGAGAGAGACCCAGGTTaGTCTGGGAATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSERDPG*SGNLSL
Trigger: GAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTC...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR TCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLSHRSQ*LRDSSR
Trigger: GCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGA...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGCCCTGATGCACTCTaGACTTCCAGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSSPDAL*TSRRPA
Trigger: AGCTGGCCTTCTGGAAGTTCAGAGTGCATCAGGGCT...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGATGCCTGCCTGGCTGTaGGGGGTAGAGGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWMPAWL*GVEVKT
Trigger: TGTCTTCACCTCTACCCCTCACAGCCAGGCAGGCAT...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGCCAACTGCGTGTTCCTaGGAGGAAGGGCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RWEMREPILVELGLQLLRPTACS*EEGPVG
Trigger: TCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGG...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACATGGATGAGGTGGAAGTaGCAGTGTGCCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTWMRWK*QCAGSP
Trigger: TGGGGACCCGGCACACTGTCACTTCCACCTCATCCA...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGGGAGGCTGCTTTGGATaGGGTGGAAGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVGGCFG*GGSDSV
Trigger: CACACTGTCACTTCCACCTCATCCAAAGCAGCCTCC...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGTTATCATTTGTACCATaGTGCGGTTTCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGLSFVP*CGFWLC
Trigger: ACACAGCCAGAAACCGCATCATGGTACAAATGATAA...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTTTTGAGGCCCCAACATaGCAGCCACTGGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: GEKEGCVGCSWLRCSNTSFEAPT*QPLGHR
Trigger: CCGGTGGCCCAGTGGCTGTCATGTTGGGGCCTCAAA...AGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCTTTGACAGACAGCCCTaGAGGTGGCTTGACTTCCCG +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLFDRQP*RWLDFP
Trigger: CGGGAAGTCAAGCCACCTTCAGGGCTGTCTGTCAAA...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR GCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCAGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp ACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGCCCCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: TVQPVEPSLGEALGWAGPQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...GGGCCCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCAATCGCCCGGCCTTCTaGTGCTGGAACAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGNRPAF*CWNRAE
Trigger: TTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGCAAGAGTTTTTCCTCTaGTCCCTCAGACACAAAGAT +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQQEFFL*SLRHKD
Trigger: ATCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTG...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: EGCVGCSWLRCSNTSPGLQETAS*SPTWPE
Trigger: TTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTG...GAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000674596.1
CDS-3UTR GCA 90 bp TCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCATGACAAACCCTCTGTaGTCCAACCAGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SNQALIWEHLWASSYVPGMTNPL*SNQALI
Trigger: GATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT...GCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGGTGTGTGGGATaGTCTTGGTTACGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTEGCVG*SWLRCS
Trigger: ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGGAAGGGTGTGTGGGATaGTCTTGGTTACGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AMGWEAGCLPRKVLSFRREGCVG*SWLRCS
Trigger: ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC...CCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCCCACATGCCATCCTaGTGCACGGTCTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWSHMPS*CTVWSP
Trigger: AGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGA...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp AGAAGCATGGCTGAACGGGTGATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGACAGGGTTCTGTCCTTaGCAAGGGAGGCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSMAERVILLNPKPLRRVTGFCP*QGRLVA
Trigger: GGCCACCAGCCTCCCTTGGCAAGGACAGAACCCTGT...CACCCTCCTTAGAGGCTTGGGGTTAAGTAGAATCACCCGTTCAGCCATGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTATGCTCTCTGTGCAAGTaGCTGGCTCCTGGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVCSLCK*LAPGVH
Trigger: GTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTAGCTGCCCAGCCAACTaGGTGTTCCTGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVISCPAN*VFLRGR
Trigger: CCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCT...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTGATGCTGCAGAAGAGCTaGTCTGGGAAGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SVQVPGSWCPPKDKQTSLMLQKS*SGKPLP
Trigger: AGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCAT...CAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTACTCTTGTGTCCATGCTaGAGAAGAGCTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLLLCPC*RRAALG
Trigger: TCCCAGAGCAGCTCTTCTGCAGCATGGACACAAGAG...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACACTCTTGTGTCCATGCTaGAGAAGAGCTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTLLCPC*RRAALG
Trigger: TCCCAGAGCAGCTCTTCTGCAGCATGGACACAAGAG...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCCTCCTCTTGTGTCCATaGTGCAGAAGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFLLLCP*CRRAAL
Trigger: CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAG...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGTCTTCATCAGTCCTGTaGCACTGGAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPSSSVL*HWRGGR
Trigger: TCTCCCACCTCTCCAGTGGCACAGGACTGATGAAGA...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGGTCCCTGTTGCCCACTaGACTGATCATGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: RCNGMGGRMLAQKGAFLQVPVAH*TDHEAT
Trigger: GGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGAC...CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGTCCCTGTTGCCCACTaGACTGATCATGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQVPVAH*TDHEAT
Trigger: GGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGAC...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp TGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CMSLLPTALIMKPPATATILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGCCCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LPSQLRVPERKGLLEPLVILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...AACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQRILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCAGGTCCCCTTGATGTaGACCAAGGCCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHQVPLM*TKASAL
Trigger: CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGGGTAAAATCTAGGTGGTaGGTATGTGGTGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: RDCAACGAFTGGSSGVGWVKSRW*VCGVHC
Trigger: ACAGTGAACACCACATACCCACCACCTAGATTTTAC...CCAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTCTGGGACCAAGCAAATaGCGGACACAATTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HLQVSAASRGSFSQKSVTLGPSK*RTQFPG
Trigger: CCCAGGGAATTGTGTCCGCCATTTGCTTGGTCCCAG...AGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACACGGACACGGGTCACTaGGGACAGAAGGGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHTDTGH*GQKGSI
Trigger: GATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGT...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTGGATGGAGGGCACTATaGGAAGTGCATGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFGWRAL*EVHADD
Trigger: GTCATCTGCATGCACTTCCCATAGTGCCCTCCATCC...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCAAGGGAAACACAGACCTaGGCCATGGATGGAACGCGA +
Preference number: 4 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSRETQT*AMDGTR
Trigger: TCGCGTTCCATCCATGGCCCAGGTCTGTGTTTCCCT...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCCCACTGGTTCTTAGGTaGCTTGCTGTGCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RGFLCSASSCVHAAEELLPLVLR*LAVQQL
Trigger: CAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGG...GAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACCGTGAGCTGGGCATTTaGTTGCCCCTGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNRELGI*LPLNLR
Trigger: CCTGAGGTTCAGGGGCAACCAAATGCCCAGCTCACG...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CMSLLPTALIMKPPATATDSCGA*SAVIEA
Trigger: GGCCTCAATAACTGCAGACCAAGCTCCACAAGAATC...CGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGGCCCTTTTTCCACCATaGGAATTTCTCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LLGHAGSEWGLHPLMLFLALFPP*EFLTSS
Trigger: GCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGC...CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTGGGCAGCTTGCCTGGTaGATGTTTCTGGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPGQLAW*MFLALF
Trigger: AAAAAGGGCCAGAAACATCCACCAGGCAAGCTGCCC...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAACTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR TCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNSHRSQ*LRDSSR
Trigger: GCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGA...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAAAGGCCACACAGCTTTaGGTGGCAGAACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: GSPSLSETVQPVEPSLGEKATQL*VAEPGY
Trigger: ATAACCAGGTTCTGCCACTCAAAGCTGTGTGGCCTT...TTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp CCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTATAAGCAGACAAGCTTaGCTCAGAGCTAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PVPLERWEMREPILVELGISRQA*LRARRL
Trigger: TAGCCTCCTAGCTCTGAGTCAAGCTTGTCTGCTTAT...ACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GTGGCCTGCACGGGTGTGCTGGGGGAAGTGCTAGCCACTGCCCTTTACCCTTCTACTACTTGGGGTCAGTaGTTCTTTTGTAACGAGTCT +
Preference number: 4 (lower is better)
Translates to: VACTGVLGEVLATALYPSTTWGQ*FFCNES
Trigger: AGACTCGTTACAAAAGAATCACTGACCCCAAGTAGT...AGAAGGGTAAAGGGCAGTGGCTAGCACTTCCCCCAGCACACCCGTGCAGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCCAGGTCTGGCTGAATaGAGATGTTGGCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: WDALGYAAVTHLQVSAASPGLAE*RCWHVS
Trigger: TGACACGTGCCAACATCTTCATTCAGCCAGACCTGG...GGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGT +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGKRRRR*PRNRRR
Trigger: ACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTT...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GGGAAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: GKLWGGLGPNTPCVSEGPTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...TGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTCATTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SPGLSGFPRKFLTEVSDSFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...TGAGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
CDS-3UTR GCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGACTGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLQVSAASRGSFSQKSVTEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...AGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
CDS-3UTR GCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCACATTATCAGAGACTGTaGAGCCTGTGGAGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASHYQRL*SLWSLH
Trigger: GTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATG...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGAATCGCCCGGCCTTCTaGTGCTGGAACAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARNRPAF*CWNRAE
Trigger: TTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGTGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGGGGCACTATGGGAAGTaGATGCAGATGACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKGHYGK*MQMTKS
Trigger: ACTCTTGGTCATCTGCATGCACTTCCCATAGTGCCC...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTTGCCCTGCAGCCCTCTaGTCTCTGTGCAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GEKEGCVGCSWLRCSNTSCPAAL*SLCKCL
Trigger: CAGGCACTTGCACAGAGAGCAGAGGGCTGCAGGGCA...AGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAAGGCTTCCTGTGCTCTaGCTCCTCTTGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVRLPVL*LLLCPC
Trigger: GCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAACAGGCCATCCCGAGTaGATGTCCCTGTTGCCCACT +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTTGHPE*MSLLPT
Trigger: AGTGGGCAACAGGGACATGCACTCGGGATGGCCTGT...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACATCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EWDIHSSSRSGGAGVMGTSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...TGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: PANCVFLRGRACWSHWFLACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSNTSPGLSGFPRKFLTEGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...TTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACAGACTGTGCAGCCTGTaGAGCCTTCACTGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHRLCSL*SLHWGK
Trigger: CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCT...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATGAGGTCATCATACTCTaGAAACTAGAAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CPSGRWAAADFGKAALHYEVIIL*KLEARK
Trigger: TTTCCTGGCTTCTAGTTTCCAGAGTATGATGACCTC...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000642870.2
CDS-3UTR CCA 90 bp CAGCTGAGGGTGCTGGGCTTTTGCTCTGTGTCGTCCCATGACACGTGGGGCACAAGTTCTAAACTGGGCTaGGAGGAAAGCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QLRVLGFCSVSSHDTWGTSSKLG*EESKER
Trigger: TCTTTCCTTGCTTTCCTCCCAGCCCAGTTTAGAACT...TGTGCCCCACGTGTCATGGGACGACACAGAGCAAAAGCCCAGCACCCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AGAAGCATGGCTGAACGGGTGATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGAGGCGAAGGAACAGCTaGCTGTCACCAGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSMAERVILLNPKPLRRVRRRNS*LSPGWR
Trigger: TCTCCACCCTGGTGACAGCCAGCTGTTCCTTCGCCT...CACCCTCCTTAGAGGCTTGGGGTTAAGTAGAATCACCCGTTCAGCCATGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGCCTGTTGGAGCCACTaGTTCTTAGGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CSNTSPGLSGFPRKFLTEACWSH*FLGGLL
Trigger: CAGCAAGCCACCTAAGAACCAGTGGCTCCAACAGGC...TTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTGAGAGGAAGGGCCTGTTaGAGCCACTGGTTCTTAGGT +
Preference number: 4 (lower is better)
Translates to: SVQVPGSWCPPKDKQTSLRGRAC*SHWFLG
Trigger: ACCTAAGAACCAGTGGCTCCAACAGGCCCTTCCTCT...CAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACAACATGACAGCCACTaGGCCACCGGGACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTQHDSH*ATGTQE
Trigger: TTCTTGGGTCCCGGTGGCCCAGTGGCTGTCATGTTG...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGATCTTAAATGGTCTCTaGGCTGCTGGGACATGCAGG +
Preference number: 4 (lower is better)
Translates to: RLPVLCLLLCPCCRRAALILNGL*AAGTCR
Trigger: CCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGAT...CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTAGGAGAGATCTTAAATaGTCTCTGGGCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: HGNFSPLALRAADHLPAPRRDLK*SLGCWD
Trigger: GTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCT...AGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACTCTGGGCAGCTTGCCTaGTGGATGTTTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNSGQLA*WMFLAL
Trigger: AAGGGCCAGAAACATCCACCAGGCAAGCTGCCCAGA...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTACTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAAAACACTGCTATCTTTaGCAGACAGCCCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTKHCYL*QTALKV
Trigger: CACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTT...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp CTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGGAGAAGAAAGACCCTTaGGAGCACTGTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCAPTRPSSGNICGLAPMEKKDP*EHCISH
Trigger: GTGGGAGATACAGTGCTCTCAAGGGTCTTTCTTCTC...CATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCATGGAGAGGTGGGAGATaGGGGAGCCGATTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPWRGGR*GSRFLW
Trigger: CCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCA...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCAGCTCCTGTTTTTGGTaGATTACTAAACTGATTGAC +
Preference number: 4 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLSSCFW*ITKLID
Trigger: GTCAATCAGTTTAGTAATTCACCAAAAACAGGAGCT...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAATGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RWEMREPILVELGLQLLRFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGGGTGGGCTGCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: QRLCSLWSLHWGKLWGGLQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...CAGCCCACCCCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAAGGGTGTGTGGGATaGTCTTGGTTACGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVIEGCVG*SWLRCS
Trigger: ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCACAGAGGTGGAAGAGGTaGTCTGGTCACGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPQRWKR*SGHGKR
Trigger: CCTCTTCCCGTGACCAGAGCACCTCTTCCACCTCTG...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAATGCTGCAGAAGAGCTaGTCTGGGAAGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTMLQKS*SGKPLP
Trigger: AGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCAT...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAACTCCTCTTGTGTCCATaGTGCAGAAGAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CSNTSPGLSGFPRKFLTELLLCP*CRRAAL
Trigger: CAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAG...TTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTTCTTCATCAGTCCTGTaGCACTGGAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVISSSVL*HWRGGR
Trigger: TCTCCCACCTCTCCAGTGGCACAGGACTGATGAAGA...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGCTTGCCCAGAAAGGTaGTTTCCTTCAGACGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVACPER*FPSDGA
Trigger: TGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCAGTCTTAGGCTCCCGCTaGCATTTGGGTAAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPVLGSR*HLGKPV
Trigger: CACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGAC...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCTGGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLWLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCCA...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675510.1
CDS-3UTR CCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCATCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EGCVGCSWLRCSNTSPGLVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...GAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCGTAAAATCTAGGTGGTaGGTATGTGGTGTTCACTGT +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGVKSRW*VCGVHC
Trigger: ACAGTGAACACCACATACCCACCACCTAGATTTTAC...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCTGGGACCAAGCAAATaGCGGACACAATTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHLGPSK*RTQFPG
Trigger: CCCAGGGAATTGTGTCCGCCATTTGCTTGGTCCCAG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTATCTGGGAACATTTGTaGGCTAGCTCCTATGTGCCT +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFIWEHL*ASSYVP
Trigger: AGGCACATAGGAGCTAGCCCACAAATGTTCCCAGAT...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACATGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGTGTGTGGGATGCTCTTaGTTACGCTGCAGTAACACA +
Preference number: 4 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPCVGCS*LRCSNT
Trigger: TGTGTTACTGCAGCGTAACCAAGAGCATCCCACACA...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGAGAAAGAAGGGTGTGTaGGATGCTCTTGGTTACGCT +
Preference number: 4 (lower is better)
Translates to: SWLRCSNTSPGLSGFPRKRKKGV*DALGYA
Trigger: AGCGTAACCAAGAGCATCCCACACACCCTTCTTTCT...CTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAACCACACAGCTTTGAGTaGCAGAACCTGGTTATGTCA +
Preference number: 4 (lower is better)
Translates to: GSPSLSETVQPVEPSLGEPHSFE*QNLVMS
Trigger: TGACATAACCAGGTTCTGCCACTCAAAGCTGTGTGG...TTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCGGGAGCCGATTCTTGTaGAGCTTGGTCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLGSRFL*SLVCSY
Trigger: ATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCC...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGGGGAGCCGATTCTTGTaGAGCTTGGTCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: AVTHLQVSAASRGSFSQKGSRFL*SLVCSY
Trigger: ATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCC...CTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAATCTTAAATGGTCTCTaGGCTGCTGGGACATGCAGG +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQILNGL*AAGTCR
Trigger: CCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGAT...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAAGGAGAGATCTTAAATaGTCTCTGGGCTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQRRDLK*SLGCWD
Trigger: GTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCT...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp CTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTGCCCTTTTTCCACCATaGGAATTTCTCACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LGYAAVTHLQVSAASRGSALFPP*EFLTSS
Trigger: GCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGC...ACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCACCAGACCCTCTATGGTaGCTTCTAAGGGTTCATGGG +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSPDPLW*LLRVHG
Trigger: CCCATGAACCCTTAGAAGCCACCATAGAGGGTCTGG...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR CCA 90 bp ACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTCCTCCAGACCCTCTATaGTGGCTTCTAAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGEVGDEGADSCGAWSAVPPDPL*WLLRVH
Trigger: ATGAACCCTTAGAAGCCACCATAGAGGGTCTGGAGG...AACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR TCA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCACCGTGGACAACTCTTaGATTAAATCCACTAGAGCG +
Preference number: 4 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFTVDNS*IKSTRA
Trigger: CGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGT...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp TGCTCTCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAAAACACTGCTATCTTTaGCAGACAGCCCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CSLCKCLAPGVHPRISRQKHCYL*QTALKV
Trigger: CACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTT...TTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GGAGGGTGCTGGAGGCCTGAAGAGACAAAGGCTGTTAAGTTTCCTCAGAGAATGGCATGGCTGAACGGGTaGTTCTACTTAACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GGCWRPEETKAVKFPQRMAWLNG*FYLTPS
Trigger: GCTTGGGGTTAAGTAGAATCACCCGTTCAGCCATGC...CATTCTCTGAGGAAACTTAACAGCCTTTGTCTCTTCAGGCCTCCAGCACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCTTTGACAGACAGCCCTaGAGGTGGCTTGTAAACTTC +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLFDRQP*RWLVNF
Trigger: GAAGTTTACAAGCCACCTTCAGGGCTGTCTGTCAAA...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675510.1
CDS-3UTR GCA 90 bp TGGGAGGTAAAGGGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: WEVKGLPGQADMTNPLCSTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...GGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCCCTTTACCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIAREVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR GCA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACTCCCAGGATCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: AFCCWNRAEGSPVTQHSQDLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGATC...CTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS-3UTR GCA 90 bp ACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTGTGCTCTTGGTTACGCTaGAGTAACACATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: THLQVSAASRGSFSQKSVCSWLR*SNTSPG
Trigger: ACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA...CACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CACGTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTGGGGACAAGGAACAATGTGTTaGGGTATAGAAAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: HVEEEGDKALRTDTGHWGQGTMC*GIEKAT
Trigger: TGTGGCCTTTTCTATACCGCAACACATTGTTCCTTG...TCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAATGCTGCAGAAGAGCTaGTCTGGGAAGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPMLQKS*SGKPLP
Trigger: AGGCAGTGGCTTCCCAGAGCAGCTCTTCTGCAGCAT...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: EWDIHSSSRSGGAGVMGTEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...TGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp GGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GEVGDEGADSCGAWSAVIACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...AATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NGTSIHPVDQEGLGLWVQGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...TTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp CTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCTGGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LHYQRLCSLWSLHWGKLWILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CCAGAGCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLEFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CACGTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTGGGGATTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: HVEEEGDKALRTDTGHWGFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...TCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTGCAATAAAAATAGGATaGATTGAAGCAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACAIKIG*IEAGMN
Trigger: ATTCATCCCTGCTTCAATCCATCCTATTTTTATTGC...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CCA 90 bp GGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCATTCCCAGAGCTCCTaGGACCAAGCAAATGGCGGA +
Preference number: 4 (lower is better)
Translates to: GEKEGCVGCSWLRCSNTSHSQSS*DQANGG
Trigger: TCCGCCATTTGCTTGGTCCCAGGAGCTCTGGGAATG...AGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACGGAAGGCAGCTAATGTaGGGTGGTTGTGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHGRQLM*GGCGNR
Trigger: TCTGTTCCCACAACCACCCCACATTAGCTGCCTTCC...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp ACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: TGEVGDEGADSCGAWSAVDSCGA*SAVIEA
Trigger: GGCCTCAATAACTGCAGACCAAGCTCCACAAGAATC...AACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAACTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR TCA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGTTTTTGGCTAGATCCTaGGAGGCTATTTTTCTTACG +
Preference number: 4 (lower is better)
Translates to: GFLCSASSCVHAAEELLWFLARS*EAIFLT
Trigger: CGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAA...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NGTSIHPVDQEGLGLWVQEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...TTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp GGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GEKEGCVGCSWLRCSNTSEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...AGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: QAGQMGPEACTCTPQARGQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGACTCGCGGTCGCCATaGCAGGTCTGGGGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNDSRSP*QVWGCR
Trigger: CCGGCACCCCCAGACCTGCCATGGCGACCGCGAGTC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp TGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CSNTSPGLSGFPRKFLTEILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...TTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTGAGGTCATCATACTCTaGAAACTAGAAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFEVIIL*KLEARK
Trigger: TTTCCTGGCTTCTAGTTTCCAGAGTATGATGACCTC...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CCA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGACCTATTCCGAGAAGATaGAATCACAGGAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: SGRWAAADFGKAALHYQRPIPRR*NHRNFA
Trigger: AGCAAAATTCCTGTGATTCCATCTTCTCGGAATAGG...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAATATTACCTCCCCTGCAGGCCTGCGGCTaGGTCTTAGGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KVIHLGGIFNKHALILPPLQACG*VLGSRC
Trigger: GCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAG...GGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCCTCCCAGGTGAATGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp TCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTGAAGATGGGGATAATGTaGAAATGGCAGTTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SVQVPGSWCPPKDKQTSLKMGIM*KWQLSR
Trigger: TCGGGACAACTGCCATTTCCACATTATCCCCATCTT...CAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAGTAACGAGTCTTTCATaGTGTGACTTTGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GQERKKGVWDALGYAAVTVTSLS*CDFEAP
Trigger: TGGGGCCTCAAAGTCACATCATGAAAGACTCGTTAC...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACTACTTGGGGTCAGTaGTTCTTTTGTAACGAGTCT +
Preference number: 4 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLTTWGQ*FFCNES
Trigger: AGACTCGTTACAAAAGAATCACTGACCCCAAGTAGT...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGATGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR GCA 90 bp CTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCTTCAACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: LDKWGLRLVRAHHRLEASTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...TGAAGCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: SWLRCSNTSPGLSGFPRKTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGAGTTTCCTCAGAGAATaGATGAGGGAGTTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWSFLRE*MRELSR
Trigger: CCTAGACAACTCCCTCATGCATTCTCTGAGGAAACT...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGATCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: EWDIHSSSRSGGAGVMGTILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...TGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAGCTCTGGGGTGGGCTaGGCCCCAACACACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRSSGVG*APTHPV
Trigger: CACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCT...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp CAGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTGAGGTCATCATACTCTaGAAACTAGAAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGTGEKEGCVGCSWLRCSEVIIL*KLEARK
Trigger: TTTCCTGGCTTCTAGTTTCCAGAGTATGATGACCTC...ACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGACTTTCAGCCTTTTTaGCTAGATCCTGAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSDFQPF*LDPERL
Trigger: TAGCCTCTCAGGATCTAGCCAAAAAGGCTGAAAGTC...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671102.1
3UTR CAA 72 bp AGGGTGCCATGCCCAGTTAGTTCAAGGAACAATGTGTaGCGGTATAGAAAAGGCCACACAGCTTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RVPCPVSSRNNV*RYRKGHTALSG
Trigger: GCCACTCAAAGCTGTGTGGCCTTTTCTATACCGCAACACATTGTTCCTTGAACTAACTGGGCATGGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGACTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRLGCDL*DPLLQT
Trigger: GGTCTGGAGGAGGGGATCTCACAGATCACATCCAAG...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGTAACGAGTCTTTCATaGTGTGACTTTGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPVTSLS*CDFEAP
Trigger: TGGGGCCTCAAAGTCACATCATGAAAGACTCGTTAC...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCATTTACCAGGTCTGGCTaGATGAAGATGTTGGCACGT +
Preference number: 4 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPFTRSG*MKMLAR
Trigger: ACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAA...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCACCCAACGTGGCTCTATaGTTGTGTACCTTTGCACAT +
Preference number: 4 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPPNVAL*LCTFAH
Trigger: ATGTGCAAAGGTACACAAGCATAGAGCCACGTTGGG...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CCA 90 bp TTAAGTTTCCTCAGAGAATGCATGAGGGAGTTGTCTAGGGAAACACAGACCTGGGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSFLRECMRELSRETQTWVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...CCAGGTCTGTGTTTCCCTAGACAACTCCCTCATGCATTCTCTGAGGAAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCATTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: RWEMREPILVELGLQLLRFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CCA 90 bp AAAGTCATTCACCTGGGAGGGATTTTTAACAAACATGCACTAATATTACCTCCCAGACGGTGCAGGGCCTaGGCCAGCCTTACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVIHLGGIFNKHALILPPRRCRA*ASLTGQ
Trigger: CTGACCTGTAAGGCTGGCCCAGGCCCTGCACCGTCT...GGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCCTCCCAGGTGAATGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CCA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAGAATTTACCAGGTCTaGCTGAATGAAGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNRIYQV*LNEDVG
Trigger: GCCAACATCTTCATTCAGCCAGACCTGGTAAATTCT...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR TCA 90 bp CATGAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAACTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HEHFSHLTRVFPLLPQTQLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...TTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR TCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GIFNKHALILPPSSKLLLLVHTR*ARSVAS
Trigger: GCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAG...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675510.1
CDS-3UTR TCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGCTCTGTGTCGTCCCATaGCACGTGGGGCACATGTGG +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRLCVVP*HVGHMW
Trigger: CCACATGTGCCCCACGTGTCATGGGACGACACAGAG...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTTGCTGTGCAACAGCTaGCCGACAGAGGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GIFNKHALILPPSSKLLLLLCNS*PTEGLC
Trigger: GCACAGGCCCTCTGTCGGTCAGCTGTTGCACAGCAA...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp GTAATGGTAAAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VMVKSRWWVCGVHCKMMSGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...TGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTTTACCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAGGGATGGTCCTTTTGTaGCGGCCAGGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPGMVLL*RPGEKG
Trigger: GCCCTTCTCACCTGGCCGGCACAAAAGGACCATCCC...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAGTGGGGGCCCAGTCCTaGCCGTACACAAAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPVGAQS*PYTKQY
Trigger: GTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCAC...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp CATGAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: HEHFSHLTRVFPLLPQTQVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp TCTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: SAPSDTKIFHRAQGKIARFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...CCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGCCTGAGCCACCACCTTaGGGTCTGTGTACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLPEPPP*GLCTRA
Trigger: GGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGG...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAAGCTTCAGGTCCCCTTaGTGTGGACCAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPSFRSP*CGPRPV
Trigger: CACTGGCCTTGGTCCACATCAAGGGGACCTGAAGCT...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp ATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCGGGACATGCAGGCTCTaGGTGGGGACTGCACCCACT +
Preference number: 4 (lower is better)
Translates to: ITWFLFNCLVLIEFTRSGGTCRL*VGTAPT
Trigger: AGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCC...GCCAGACCTGGTAAATTCTATCAAAACTAGACAGTTAAATAAGAACCACGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCATGGGCGCTCTCCACCTaGCCGTTGACCATGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPWALST*PLTMSR
Trigger: TCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCA...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR GCA 90 bp AGAAGCATGGCTGAACGGGTGATTCTACTTAACCCCAAGCCTCTAAGGAGGGTGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: RSMAERVILLNPKPLRRVTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CACCCTCCTTAGAGGCTTGGGGTTAAGTAGAATCACCCGTTCAGCCATGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR GCA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTACAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: RGQERKKGVWDALGYAAVQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
CDS-3UTR GCA 90 bp AGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGCAGTTATTGAGGCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: RWEMREPILVELGLQLLRQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...CCTCAATAACTGCAGACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000674596.1
CDS-3UTR CCA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAATTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGCAGGTCCCCTTGATGTaGACCAAGGCCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLQVPLM*TKASAL
Trigger: CAGGGCACTGGCCTTGGTCCACATCAAGGGGACCTG...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAAGCCAAGGGAGGCTGGTaGCCAGAAGCATGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKAKGGW*PEAWLN
Trigger: GTTCAGCCATGCTTCTGGCCACCAGCCTCCCTTGGC...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGCATGCAGGCTCTGAGTaGGGACTGCACCCACTCATG +
Preference number: 4 (lower is better)
Translates to: GIFNKHALILPPSSKLLLHAGSE*GLHPLM
Trigger: CATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATG...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR GCA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTCACCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGHLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGGTG...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACTCATACTCTGGAAACTaGGCGCTCTCCACCTGCCCG +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNSYSGN*ALSTCP
Trigger: CGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGAATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAGACAGGCTGGACAAATaGGGCCTGAGGCTTGTACGT +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPDRLDK*GLRLVR
Trigger: ACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATGGCAGGGAGGGTGCTaGAGGCCTGAAGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKWQGGC*RPEETK
Trigger: CTTTGTCTCTTCAGGCCTCCAGCACCCTCCCTGCCA...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAATGTGGGGTGGTTGTaGGAACAGAAGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRNVGWL*EQKGAP
Trigger: AGGCGCTCCCTTCTGTTCCCACAACCACCCCACATT...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR TCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAACTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKLGCDL*DPLLQT
Trigger: GGTCTGGAGGAGGGGATCTCACAGATCACATCCAAG...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR TCA 90 bp GGGATTTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GIFNKHALILPPSSKLLLLGSWM*SVRSPP
Trigger: AGGAGGGGATCTCACAGATCACATCCAAGAGCCAAG...CAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR TCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGTATTTCCCAGCTGCTaGCAGGCTGGACAAATGGGG +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNVFPSC*QAGQMG
Trigger: CCCCATTTGTCCAGCCTGTCAGCAGCTGGGAAATAC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp GTAATGGTAAAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCATTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VMVKSRWWVCGVHCKMMSFHTSA*RTSWLL
Trigger: CAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAA...TGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTTTACCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp ATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCAGCTGCCCAGCCAACTaGGTGTTCCTGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ITWFLFNCLVLIEFTRSGSCPAN*VFLRGR
Trigger: CCTTCCTCTCAGGAACACGCAGTTGGCTGGGCAGCT...GCCAGACCTGGTAAATTCTATCAAAACTAGACAGTTAAATAAGAACCACGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGGGACAAACATGGGGATaGTCCTTTTGTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLGQTWG*SFCAGQ
Trigger: CTGGCCGGCACAAAAGGACCATCCCCATGTTTGTCC...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAGGTGAGGTGAGGCCATaGACAGAGAAGACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPGEVRP*TEKTAF
Trigger: GAAAGCTGTCTTCTCTGTCCATGGCCTCACCTCACC...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNEVPHQ*LPHILA
Trigger: AGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACGAGGTCATCATACTCTaGAAACTGGGCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNEVIIL*KLGALH
Trigger: GTGGAGAGCGCCCAGTTTCCAGAGTATGATGACCTC...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GTAATGGTAAAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: VMVKSRWWVCGVHCKMMSACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...TGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTTTACCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRACRTS*LLDVIC
Trigger: ACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGC...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAAGTTCCCGAACACATCTaGTCCATACACGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKVPEHI*SIHAEH
Trigger: GTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAAC...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGATTTAGACGTAGATTCTaGGACAAACATGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRFRRRF*DKHGDG
Trigger: ACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAA...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
3UTR CAA 72 bp AACTTCCTATTCCGAGAAGATGGAATCACAGGAATTTaGCTGACAACAGACGATGAGTTTCAGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: NFLFREDGITGI*LTTDDEFQNAQ
Trigger: CTGTGCGTTCTGAAACTCATCGTCTGTTGTCAGCAAAATTCCTGTGATTCCATCTTCTCGGAATAGGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CCA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCAATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACATTCTGGGACAAACATaGGGATGGTCCTTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNILGQT*GWSFCA
Trigger: GGCACAAAAGGACCATCCCCATGTTTGTCCCAGAAT...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp ATAACGTGGTTCTTATTTAACTGTCTAGTTTTGATAGAATTTACCAGGTCTGGCGATTCTTGTGGAGCTTaGTCTGCAGTTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITWFLFNCLVLIEFTRSGDSCGA*SAVIEA
Trigger: GGCCTCAATAACTGCAGACCAAGCTCCACAAGAATC...GCCAGACCTGGTAAATTCTATCAAAACTAGACAGTTAAATAAGAACCACGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR GCA 90 bp GAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAAACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT +
Preference number: 4 (lower is better)
Translates to: EAGMNSWIYVNIQVRNRKTQSST*SRGHHT
Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...TTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
3UTR CAA 72 bp TGGATATATGTGAATATACAAGTACGGAACAGGAAATaGGTAATGGTAAAATCTAGGTGGTGGGTATGTGGT +
Preference number: 4 (lower is better)
Translates to: WIYVNIQVRNRK*VMVKSRWWVCG
Trigger: ACCACATACCCACCACCTAGATTTTACCATTACCAATTTCCTGTTCCGTACTTGTATATTCACATATATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR GCA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACCAGCTTGTAAACTTCTaGAGTTTAGACGTAGATTCT +
Preference number: 4 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNQLVNF*SLDVDS
Trigger: AGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTG...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CCA 90 bp GCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACAGGAAATTGGCAATAAAAATAGGATaGATTGAAGCAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: AGMNSWIYVNIQVRNRKLAIKIG*IEAGMN
Trigger: ATTCATCCCTGCTTCAATCCATCCTATTTTTATTGC...CAATTTCCTGTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461069.6
ENST00000647056.1
CDS-3UTR CAA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGAGCTGCAGTCCAACTaGGCCGGAAGCTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAELQSN*AGSCGE
Trigger: CTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTC...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CAA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTGGAGGGCCTGGTGGTTaGAAGAGCACAGGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PGCPSGRWAAADFGKAALGGPGG*KSTGKR
Trigger: GCGCTTCCCTGTGCTCTTCAAACCACCAGGCCCTCC...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS GCA 90 bp GGGGACCCACCTAGGCCGCGCGCGGTTGCTAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGTAGCGCGCAGGACACGTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GDPPRPRAVAKRRRR*PRNRRRSAQDTFLG
Trigger: GCCAAGAAACGTGTCCTGCGCGCTACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAGGTGGGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000395616.7
ENST00000477683.5
ENST00000647252.1
ENST00000675510.1
CDS GCA 90 bp ACCGCAGGGACTGGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTaGTGCAGTGTGGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: TAGTGRSGDSVNKGG*CSVGEGPDLVSGAP
Trigger: AGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCCAGTCCCTGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476298.2
ENST00000487415.6
ENST00000645021.1
CDS GCA 90 bp GCAGGGACTGGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTGCTaGAGTGTGGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: AGTGRSGDSVNKGGC*SVGEGPDLVSGAPA
Trigger: TGCAGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCCAGTCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645021.1
CDS CCA 90 bp CTCCCCGTCCCCGCCGAAGCGCAGAGGCGAATGAGAGCTGAGTCCTaGGGAGCAGCGCTCCGACTCACGCCCTCAGCAAGCCGAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LPVPAEAQRRMRAES*GAALRLTPSASRVF
Trigger: AAACACTCGGCTTGCTGAGGGCGTGAGTCGGAGCGCTGCTCCCCAGGACTCAGCTCTCATTCGCCTCTGCGCTTCGGCGGGGACGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574508.7
CDS-3UTR CAA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCACGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGA +
Preference number: 5 (lower is better)
Translates to: WPPGCPSGRWAAADFGKARRTRF*AATPSR
Trigger: TCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCG...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261499.10
ENST00000647252.1
CDS GCA 90 bp GCAGGGACTGGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTGCTaGAGTGTGGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCTAGA +
Preference number: 5 (lower is better)
Translates to: AGTGRSGDSVNKGGC*SVGEGPDLVSGAPR
Trigger: TCTAGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCCAGTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476298.2
ENST00000487415.6
CDS CCA 90 bp CAACTTGGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAGTCAGTaGAGGGTTCGGCCGGACGCTCTAGAATCCCGGAGGACCGGGATC +
Preference number: 5 (lower is better)
Translates to: QLGRKLRRGSATGSQ*RVRPDALESRRTGI
Trigger: GATCCCGGTCCTCCGGGATTCTAGAGCGTCCGGCCGAACCCTCCACTGACTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476298.2
ENST00000477478.7
ENST00000582857.2
ENST00000645021.1
CDS CCA 90 bp CTGGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTGCTGCAGTGTaGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCTAGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LGGAGTALTRAAAAV*VKGQTLCQVPLEAR
Trigger: CCTGGCTTCTAGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476298.2
ENST00000487415.6
CDS-3UTR CAA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS TCA 90 bp CTGGGAATCTCAGCCTCAGCGTTCTCATCTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATG +
Preference number: 5 (lower is better)
Translates to: LGISASAFSSSRPSP*ATTLGSVYSGRRPM
Trigger: CATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGATGAGAACGCTGAGGCTGAGATTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395616.7
CDS GCA 90 bp CCAGACCTTGTGTCAGGTGCCCCTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTCAGCCACCGG +
Preference number: 5 (lower is better)
Translates to: PDLVSGAPRSQETAS*SPTWPEAAERLSHR
Trigger: CCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGGGCACCTGACACAAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS-3UTR CAA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGACTAGGCCGCGCGCGGTaGCTAAGAGACGCCGGCGTT +
Preference number: 5 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRLGRAR*LRDAGV
Trigger: AACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAG...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: GHQAAPQADGQRLTSGRQCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...CTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: WPPGCPSGRWAAADFGKAVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: RPAFCCWNRAEGSPVTQHMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...GTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp GGTGCTCTGGTCACGGGAAGAGGCAAGGCCGAGGCAGAGGCGGCTGGGAGACCCGTGCTCTGCCTCCTCTaGTGTCCATGCTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: GALVTGRGKAEAEAAGRPVLCLL*CPCCRR
Trigger: TCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCAC...GGGTCTCCCAGCCGCCTCTGCCTCGGCCTTGCCTCTTCCCGTGACCAGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS TCA 90 bp GGACGCTCTAGAATCCCGGAGGACCGGGATCTCTGTGGTTGGCCGTaGCGGGCACCCTCTACCGGGGATGACACATTCCCAGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GRSRIPEDRDLCGWP*RAPSTGDDTFPELL
Trigger: CAGGAGCTCTGGGAATGTGTCATCCCCGGTAGAGGGTGCCCGTCACGGCCAACCACAGAGATCCCGGTCCTCCGGGATTCTAGAGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476298.2
ENST00000477478.7
ENST00000582857.2
ENST00000645021.1
CDS CCA 90 bp TCAGGTGCCCCTAGAAGCCAGGAAACCGCGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SGAPRSQETASCSPT*PEAAERLSHRKSVE
Trigger: CTCCACTGACTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGGGCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS-3UTR CAA 90 bp GCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGGGGTGGCGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGA +
Preference number: 5 (lower is better)
Translates to: ASVPTGPWATVPRLRQGWRRTRF*AATPSR
Trigger: TCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCG...CCACCCCTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675510.1
CDS-3UTR CAA 90 bp CGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: RPAFCCWNRAEGSPVTQHLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...GTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR CAA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: PGCPSGRWAAADFGKAALCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGCACGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RPAFCCWNRAEGSPVTQHVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...GTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp CCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTTCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: PGCPSGRWAAADFGKAALSLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...AAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCCCACTGCCACGCATGTaGCACCTGTGCCATCGTGCT +
Preference number: 5 (lower is better)
Translates to: CGWVLGSRCHLGKPVAGLPLPRM*HLCHRA
Trigger: AGCACGATGGCACAGGTGCAACATGCGTGGCAGTGG...GAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS TCA 90 bp CCGGGATCTCTGTGGTTGGCCGTGACGGGCACCCTCTACCGGGGATaGCACATTCCCAGAGCTCCTGGGACCAAGCAAATGGCGGACACA +
Preference number: 5 (lower is better)
Translates to: PGSLWLAVTGTLYRG*HIPRAPGTKQMADT
Trigger: TGTGTCCGCCATTTGCTTGGTCCCAGGAGCTCTGGGAATGTGTCATCCCCGGTAGAGGGTGCCCGTCACGGCCAACCACAGAGATCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476298.2
ENST00000477478.7
ENST00000582857.2
ENST00000645021.1
CDS GCA 90 bp ACTCTGGAAACTAGGCCGCGCGCGGTTGCTAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGTAGCGCGCAGGACACGTTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: TLETRPRAVAKRRRR*PRNRRRSAQDTFLG
Trigger: GCCAAGAAACGTGTCCTGCGCGCTACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAGTTTCCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575478.7
CDS CCA 90 bp CGTGACGGGCACCCTCTACCGGGGATGACACATTCCCAGAGCTCCTaGGACCAAGCAAATGGCGGACACAATTCCCTGGGCGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RDGHPLPGMTHSQSS*DQANGGHNSLGGRG
Trigger: TCCCCTTCCGCCCAGGGAATTGTGTCCGCCATTTGCTTGGTCCCAGGAGCTCTGGGAATGTGTCATCCCCGGTAGAGGGTGCCCGTCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476298.2
ENST00000477478.7
ENST00000582857.2
ENST00000645021.1
CDS CCA 90 bp GTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTaGGGACAGAAGGGCAGCATCAGCCAGGCTGGGCTTCCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: VEEEGDKALRTDTGH*GQKGSISQAGLPGL
Trigger: AAGGCCGGGAAGCCCAGCCTGGCTGATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646248.1
CDS-3UTR CAA 90 bp TGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGA +
Preference number: 5 (lower is better)
Translates to: CPSGRWAAADFGKAALHYRRTRF*AATPSR
Trigger: TCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCG...ATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261499.10
ENST00000647252.1
CDS-3UTR CAA 90 bp CCGGGGAGCTGTGATAGCTTCCCGGCCTTCACCCTGAGCCACCACCTTGGGGTCGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGSCDSFPAFTLSHHLGVVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...GACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCTATCACAGCTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CAA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: WPPGCPSGRWAAADFGKASFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCCGGGATCTCTGTGGTaGGCCGTGACGGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: AALHYQRLCSLWSLHWGKPGSLW*AVTGTL
Trigger: GAGGGTGCCCGTCACGGCCAACCACAGAGATCCCGG...CTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477478.7
CDS-3UTR CAA 90 bp TGGCCACCAGGCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCACTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 5 (lower is better)
Translates to: WPPGCPSGRWAAADFGKALIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...TGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGCCTGGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGAATGGAACGCGAGCCGTaGTGGCTCTGGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SGRWAAADFGKAALHYQRMEREP*WLWGLR
Trigger: CCTGAGCCCCCAGAGCCACAACGGCTCGCGTTCCAT...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp CGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGGAGTGCATGTCCCTGTaGCCCACTGCACTGATCATG +
Preference number: 5 (lower is better)
Translates to: RDPRRQPPAPSSGTGHPEECMSL*PTALIM
Trigger: CATGATCAGTGCAGTGGGCAACAGGGACATGCACTC...CTCGGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATTGGGAGGCAGGATGCTaGCCCAGAAAGGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: ATGHCHACCTCAIVLPPDWEAGC*PRKVLS
Trigger: GGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCA...ATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp TGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGGGCTCCCGCTGCCATTaGGGTAAGCCGGTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: CSWLRCSNTSPGLSGFPRGSRCH*GKPVAG
Trigger: ACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCC...CCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS TCA 90 bp ATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTaGCTCAGCACTCCCAGGGGACCTGTTTCTATTTGTCCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: IARPSAAGTGLKGAP*LSTPRGPVSICPQW
Trigger: CCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS GCA 90 bp GGTGCCCCTGCAGATATAATTCCTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTCAGCCACCGG +
Preference number: 5 (lower is better)
Translates to: GAPADIIPRSQETAS*SPTWPEAAERLSHR
Trigger: CCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGAATTATATCTGCAGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645021.1
CDS-3UTR CAA 90 bp GCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: APQADGQRLTSGRQPFIIVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...GATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PSGRWAAADFGKAALHYQMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...CTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTGGGAATCTCAGCCTCAGCGATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGLGQRETQVDLGISASAMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...CGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCCGGGATCTCTGTGGTaGGCCGTGACGGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: WLRCSNTSPGLSGFPRKFPGSLW*AVTGTL
Trigger: GAGGGTGCCCGTCACGGCCAACCACAGAGATCCCGG...AAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CAA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGACTGGGAGGTGGGGGTTaGCCAGGAGCCTGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SGRWAAADFGKAALHYQRLGGGG*PGACGF
Trigger: GAAACCACAGGCTCCTGGCAAACCCCCACCTCCCAG...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp TGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCCACTGCCACGCATGTaGCACCTGTGCCATCGTGCT +
Preference number: 5 (lower is better)
Translates to: CMSLLPTALIMKPPATATPLPRM*HLCHRA
Trigger: AGCACGATGGCACAGGTGCAACATGCGTGGCAGTGG...CGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS TCA 90 bp GGAAGTTCCACACCAGTGCTTGCCGCACATCTTGGCTCTTGGATGTaGTCTGTGAGATCCCCTCCTCCAGACCCGCTGTGGGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GSSTPVLAAHLGSWM*SVRSPPPDPLWGPS
Trigger: ACTGGGCCCCCACAGCGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000675510.1
CDS GCA 90 bp GACCCGCTGTGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTAGGCCGCGCGCGGTT +
Preference number: 5 (lower is better)
Translates to: DPLWGPSPGRTQSST*SRGHHTLETRPRAV
Trigger: AACCGCGCGCGGCCTAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCACAGCGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575478.7
CDS CCA 90 bp GTGCACGGCCCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATCTGTGGCCAGCCGTAGGGGTT +
Preference number: 5 (lower is better)
Translates to: VHGPIASNHIVPEHI*SIHAEHDLWPAVGV
Trigger: AACCCCTACGGCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGGGCCGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000674596.1
ENST00000675510.1
CDS CCA 90 bp ACTCTGGAAACTAGAAGCCAGGAAACCGCGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: TLETRSQETASCSPT*PEAAERLSHRKSVE
Trigger: CTCCACTGACTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGTTTCCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000582857.2
CDS-3UTR CAA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CAA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIAVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: QAGQMGPEACTCTPQARGMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...GCCTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GCTGCCCCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AAPQADGQRLTSGRQPFISFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...AATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp AATCGCCCGGCCTTCTGCTGCTGGAACAGGGCTGAAGGGAGCCCCGTGACTCAGGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: NRPAFCCWNRAEGSPVTQGTCFY*SSVGGA
Trigger: TGCTCCACCCACTGAGGACAAATAGAAACAGGTCCC...CTGAGTCACGGGGCTCCCTTCAGCCCTGTTCCAGCAGCAGAAGGCCGGGCGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp TCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGAGGGTTGGAGAGGCCTaGAGACGAGCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SWLRCSNTSPGLSGFPRKRVGEA*RRAWRE
Trigger: CTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCT...CTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTAGGGTTGGAGAGGCCTaGAGACGAGCCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EASCALPPLVSMLQKSCSRVGEA*RRAWRE
Trigger: CTCCCTCCAGGCTCGTCTCAAGGCCTCTCCAACCCT...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS GCA 90 bp AGAGGTCATCATACTCTGGAAACTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTCAGCCACCGG +
Preference number: 5 (lower is better)
Translates to: RGHHTLETRSQETAS*SPTWPEAAERLSHR
Trigger: CCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGTTTCCAGAGTATGATGACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000582857.2
CDS-3UTR CAA 90 bp TGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: WAGPQHTLCIRRPSVIAQLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...CTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CACGTTGAAGAGGAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTGGGGAATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: HVEEEGDKALRTDTGHWGMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...TCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCTCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: GWAGPQHTLCIRRPSVIASLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...GGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGGAAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCACTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 5 (lower is better)
Translates to: GKLWGGLGPNTPCVSEGPLIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...TGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGGCTGCCGGGACAGGCAGACATGACAAACCCTCTGTGCTCCAACCAGGCCCTCGGAGAAGAAAGACCCTaGAGAGCACTGTATCTCCCA +
Preference number: 5 (lower is better)
Translates to: GLPGQADMTNPLCSNQALGEERP*RALYLP
Trigger: TGGGAGATACAGTGCTCTCAAGGGTCTTTCTTCTCC...GAGGGCCTGGTTGGAGCACAGAGGGTTTGTCATGTCTGCCTGTCCCGGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp GCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGACTTGGTCTGCAGTTATaGAGGCCACCAGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: ALGYAAVTHLQVSAASRGLGLQL*RPPAWS
Trigger: GGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAG...TCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGGCTCCCGCTGCCATTaGGGTAAGCCGGTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RGQERKKGVWDALGYAAVGSRCH*GKPVAG
Trigger: ACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CCTGTGCCACTGGAGAGGTGGGAGATGAGGGAGCCGATTCTTGTGGAGCTTGGTCTGTGTCTGGGCAGCTaGCCTGGTGGATGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PVPLERWEMREPILVELGLCLGS*PGGCFW
Trigger: CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAG...ACCAAGCTCCACAAGAATCGGCTCCCTCATCTCCCACCTCTCCAGTGGCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS CCA 90 bp GGAGTCCCATCAACCATCACCAGTTCAAGGGCCCAGTGGAGAGCCTaGTGTACTAGAAGTCCTTGGGCAGGCTGTCCTTCAGGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: GVPSTITSSRAQWRA*CTRSPWAGCPSGQD
Trigger: GTCCTGACCTGAAGGACAGCCTGCCCAAGGACTTCTAGTACACCAGGCTCTCCACTGGGCCCTTGAACTGGTGATGGTTGATGGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CCA 90 bp GATATAATTCCTAGAAGCCAGGAAACCGCGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAGTCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: DIIPRSQETASCSPT*PEAAERLSHRKSVE
Trigger: CTCCACTGACTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGAATTATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645021.1
CDS CCA 90 bp GTGCACGGCCCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATAGCCGTAGGGGTTGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: VHGPIASNHIVPEHI*SIHAEHDSRRGWCF
Trigger: AAAGCACCAACCCCTACGGCTATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGGGCCGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS CCA 90 bp GTGCACGGCCCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATCTGTGGCCCTTTTACAGGCGT +
Preference number: 5 (lower is better)
Translates to: VHGPIASNHIVPEHI*SIHAEHDLWPFYRR
Trigger: ACGCCTGTAAAAGGGCCACAGATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGGGCCGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663089.1
ENST00000671102.1
CDS-3UTR CAA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLELSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTGGCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: GFLCSASSCVHAAEELLWLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...CCAGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLEVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LIWEHLWASSYVPGRSPAVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CCTCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGATCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: PQADGQRLTSGRQPFIIRSLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...TCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp AAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KLWGGLGPNTPCVSEGPVSFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...CACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp ATCCCACATGCCATCCTGCTGCACGGTCTGGTCTCCTGGCAGCTTCCACGGCACAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: IPHAILLHGLVSWQLPRHSFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...GTGCCGTGGAAGCTGCCAGGAGACCAGACCGTGCAGCAGGATGGCATGTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGAGCTGCAGTCCAACTaGGCCGGAAGCTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RGQERKKGVWDALGYAAVELQSN*AGSCGE
Trigger: CTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582857.2
CDS-3UTR CAA 90 bp GCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATCAGAGGTCAGGGTGTaGAGCCAGGGGGCTCACCTT +
Preference number: 5 (lower is better)
Translates to: APTHPVYQKAQCHSPVSSSEVRV*SQGAHL
Trigger: AAGGTGAGCCCCCTGGCTCAACACCCTGACCTCTGA...TGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp GACAGGCTGGACAAATGGGGCCTGAGGCTTGTACGTGCACACCACAGGCTAGAGGCCTCAATCCAGACTTaGGAGGCAGTGCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: DRLDKWGLRLVRAHHRLEASIQT*EAVPSP
Trigger: TGGTGAAGGCACTGCCTCCAAAGTCTGGATTGAGGC...CTCTAGCCTGTGGTGTGCACGTACAAGCCTCAGGCCCCATTTGTCCAGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp ATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCGTGCTCTGCCTCCTCTaGTGTCCATGCTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: MGGRMLAQKGAFLQTVQGVLCLL*CPCCRR
Trigger: TCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCAC...GCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGCTTGGTCTGCAGTTATaGAGGCCACCAGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGLGLQL*RPPAWS
Trigger: GGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAG...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGGGTGCTTCTGTGCCCACGGGTCCCTGGGCAACAGTCCCTAGGCTAAGACAGTTTCATGATGTGACTTaGAGGCCCCAACATGACAGC +
Preference number: 5 (lower is better)
Translates to: GGASVPTGPWATVPRLRQFHDVT*RPQHDS
Trigger: GCTGTCATGTTGGGGCCTCAAAGTCACATCATGAAA...CTGTCTTAGCCTAGGGACTGTTGCCCAGGGACCCGTGGGCACAGAAGCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp TTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATCTGTGTCTGGGCAGCTaGCCTGGTGGATGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FWHRPSRVHVPVAHCTDHLCLGS*PGGCFW
Trigger: CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAG...ATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS GCA 90 bp GACCCGCTGTGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACGCTCGACTCAGTTGCA +
Preference number: 5 (lower is better)
Translates to: DPLWGPSPGRTQSST*SRGHHTLETLDSVA
Trigger: TGCAACTGAGTCGAGCGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCACAGCGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574508.7
CDS CCA 90 bp CTCCGAGCAGGGACCCCAGGTCATCACATTCTGCAGCTTCTAGCTTaGGAGCAGACTAGGGGAGTCCCATCAACCATCACCAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LRAGTPGHHILQLLA*EQTRGVPSTITSSR
Trigger: CCTTGAACTGGTGATGGTTGATGGGACTCCCCTAGTCTGCTCCCAAGCTAGAAGCTGCAGAATGTGATGACCTGGGGTCCCTGCTCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS-3UTR CAA 90 bp TCCAACCAGGCCCTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: SNQALIWEHLWASSYVPGLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...GCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TCAGGCCGATGGGCAGCGGCTGACTTCGGGAAGGCAGCCCTTCATTATCAGAGATGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: SGRWAAADFGKAALHYQRCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...TCTCTGATAATGAAGGGCTGCCTTCCCGAAGTCAGCCGCTGCCCATCGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000477478.7
ENST00000642870.2
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: CSWLRCSNTSPGLSGFPRCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...CCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: GDIPPILCLGSLPGGCFWCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...CCAGAAACATCCACCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CCAGCCAACTGCGTGTTCCTGAGAGGAAGGGCCTGTTGGAGCCACTGGTTCTTAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PANCVFLRGRACWSHWFLVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TAAGAACCAGTGGCTCCAACAGGCCCTTCCTCTCAGGAACACGCAGTTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GCSWLRCSNTSPGLSGFPVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...CGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCCCCCAACCTGTTCCATaGGTGCCTGCAATACCCCTA +
Preference number: 5 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFPQPVP*VPAIPL
Trigger: TAGGGGTATTGCAGGCACCAATGGAACAGGTTGGGG...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR CAA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGGTGCTCTGCCTCCTCTaGTGTCCATGCTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGVLCLL*CPCCRR
Trigger: TCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCAC...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACACTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACA +
Preference number: 5 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTLVEAA*DEVEVT
Trigger: TGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAG...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GAGGCTTCCTGTGCTCTGCCTCCTCTTGTGTCCATGCTGCAGAAGAGCTGCTCTCTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACA +
Preference number: 5 (lower is better)
Translates to: EASCALPPLVSMLQKSCSLVEAA*DEVEVT
Trigger: TGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAG...AGAGCAGCTCTTCTGCAGCATGGACACAAGAGGAGGCAGAGCACAGGAAGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GCVGCSWLRCSNTSPGLSPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...GCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp TGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WDALGYAAVTHLQVSAASELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...GGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp TTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCCTTGGTCTGCAGTTATaGAGGCCACCAGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LRCSNTSPGLSGFPRKFLLGLQL*RPPAWS
Trigger: GGACCAGGCTGGTGGCCTCAATAACTGCAGACCAAG...GAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp AGGCGTGCCTTTTGTGAGGTGCTGAGACTGGTGGCCTGCACGGGTGTGCTGGGGACTAGACTCGACTACTaGGGGTCAGTGATTCTTTTG +
Preference number: 5 (lower is better)
Translates to: RRAFCEVLRLVACTGVLGTRLDY*GSVILL
Trigger: CAAAAGAATCACTGACCCCAAGTAGTCGAGTCTAGT...CCCCAGCACACCCGTGCAGGCCACCAGTCTCAGCACCTCACAAAAGGCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS TCA 90 bp GGTCAGGACAGTCAGGTTGGAGGAGAAGGTAGTTTCTGCAGATGCTaGCACACAGCGATCTCAGCAGGACACTCTGCAGCTCTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GQDSQVGGEGSFCRC*HTAISAGHSAALGV
Trigger: CACCCCAAGAGCTGCAGAGTGTCCTGCTGAGATCGCTGTGTGTCAGCATCTGCAGAAACTACCTTCTCCTCCAACCTGACTGTCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS GCA 90 bp GACCCGCTGTGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTAGAAGCCAGGAAACC +
Preference number: 5 (lower is better)
Translates to: DPLWGPSPGRTQSST*SRGHHTLETRSQET
Trigger: GGTTTCCTGGCTTCTAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCACAGCGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000582857.2
ENST00000642870.2
CDS CCA 90 bp GTGACATCAATGGGGAAGTTCCACACCAGTGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGTGAGATCCCCTCCTCCAGACCCGCT +
Preference number: 5 (lower is better)
Translates to: VTSMGKFHTSACRTS*LLDVICEIPSSRPA
Trigger: AGCGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGATGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTCGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGA +
Preference number: 5 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGRRTRF*AATPSR
Trigger: TCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCG...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CAA 90 bp TTGGAGCCACTGGTTCTTAGGTGGCTTGCTGTGCAACAGCTGACCGACAGAGGGTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: LEPLVLRWLAVQQLTDRGCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...CCCTCTGTCGGTCAGCTGTTGCACAGCAAGCCACCTAAGAACCAGTGGCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCTCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: QPFIIRDCAACGAFTGGSSLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...GCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CTCATCTGGGAACATTTGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCAAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LIWEHLWASSYVPGRSPASFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...TGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PDGHRGGGSHPAVSQSQRETLLS*TDSPEG
Trigger: ACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTC...CCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCCATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACCCTCTTAATGCGGCCTaGTCACTGGTGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNPLNAA*SLVEAA
Trigger: AGCAGCCTCCACCAGTGACAAGGCCGCATTAAGAGG...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGAACGTGGCTCTATGCTaGTGTACCTTTGCACATATT +
Preference number: 5 (lower is better)
Translates to: GHRGGGSHPAVSQSQRPVNVALC*CTFAHI
Trigger: AATATGTGCAAAGGTACACAAGCATAGAGCCACGTT...CACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS CCA 90 bp CCTCCAGACCCTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTTaGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PPDPLWWLLRVHGCS*SQTLLPNLFHWCLQ
Trigger: TTGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGGTCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CCA 90 bp GAGATCCCCTCCTCCAGACCCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTG +
Preference number: 5 (lower is better)
Translates to: EIPSSRPSMVASKGS*VFLVPNSPPQPVPL
Trigger: CAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGGTCTGGAGGAGGGGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CCA 90 bp GTGACATCAATGGGGAAGTTCCACACCAGTGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGTGAGATCCCCTCCTCCAGACCCTCT +
Preference number: 5 (lower is better)
Translates to: VTSMGKFHTSACRTS*LLDVICEIPSSRPS
Trigger: AGAGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR CAA 90 bp GAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTCTCCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: EGCVGCSWLRCSNTSPGLLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...GAGACCTGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RGQERKKGVWDALGYAAVVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HPVYQKAQCHSPVSSCPWVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...CCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTAGTTTCCTCATGTCCTaGGTCACCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFSFLMS*VTTLKR
Trigger: CCTCTTCAACGTGGTGACCAAGGACATGAGGAAACT...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp AGCCACCACCTTGGGGTCTGTGTACTCGGGCCGCCGCCCCATGAACCAGCTTGTGTACGGAACAGGAAATaGGTAATGGTAAAATCTAGG +
Preference number: 5 (lower is better)
Translates to: SHHLGVCVLGPPPHEPACVRNRK*VMVKSR
Trigger: CCTAGATTTTACCATTACCAATTTCCTGTTCCGTAC...ACAAGCTGGTTCATGGGGCGGCGGCCCGAGTACACAGACCCCAAGGTGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS-3UTR CAA 90 bp GGGAAGCTCTGGGGTGGGCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTACGGAACAGGAAATaGGTAATGGTAAAATCTAGG +
Preference number: 5 (lower is better)
Translates to: GKLWGGLGPNTPCVSEGPVRNRK*VMVKSR
Trigger: CCTAGATTTTACCATTACCAATTTCCTGTTCCGTAC...TGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGCCCACCCCAGAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp GCTGGGCCCCAACACACCCTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTG +
Preference number: 5 (lower is better)
Translates to: AGPQHTLCIRRPSVIAQFLIWEH*WASSYV
Trigger: CACATAGGAGCTAGCCCACAAATGTTCCCAGATGAG...AAACTGGGCTATGACACTGGGCCTTCTGATACACAGGGTGTGTTGGGGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp CAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAAGCAAAGGCCACACAGCTTaGAGTGGCAGAACCTGGTTA +
Preference number: 5 (lower is better)
Translates to: QPFIIRDCAACGAFTGGSKGHTA*SGRTWL
Trigger: TAACCAGGTTCTGCCACTCAAAGCTGTGTGGCCTTT...GCTTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp GTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCACTGGTGGAGGCTGCTTaGGATGAGGTGGAAGTGACA +
Preference number: 5 (lower is better)
Translates to: VTHLQVSAASRGSFSQKSLVEAA*DEVEVT
Trigger: TGTCACTTCCACCTCATCCAAAGCAGCCTCCACCAG...TGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS GCA 90 bp TCCCAGGGGACCTGTTTCTATTTGTCCTCAGTGGGTGGAGCAGCTTaGAGATCTGAGGAGGCGACCAGGCACAAACTTGTAAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: SQGTCFYLSSVGGAA*RSEEATRHKLVNFC
Trigger: GCAGAAGTTTACAAGTTTGTGCCTGGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS-3UTR CAA 90 bp GTAGAATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: VEWDIHSSSRSGGAGVMGLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...ACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CAA 90 bp GGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: GTGEKEGCVGCSWLRCSNCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...GTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp AATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAATGGGGATGGTCCTTTaGTGCCGGCCAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NGTSIHPVDQEGLGLWVQMGMVL*CRPGEK
Trigger: CTTCTCACCTGGCCGGCACAAAAGGACCATCCCCAT...TTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CAA 90 bp CTGCTCCCTCAGACACAAAGATTTTTCACAGGGCACAGGGTAAAATCGCCCGGCGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLPQTQRFFTGHRVKSPGGTCFY*SSVGGA
Trigger: TGCTCCACCCACTGAGGACAAATAGAAACAGGTCCC...GCCGGGCGATTTTACCCTGTGCCCTGTGAAAAATCTTTGTGTCTGAGGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp GGTTACGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GYAAVTHLQVSAASRGSFETLLS*TDSPEG
Trigger: ACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTC...GAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCAGAGCTGGGCATTTGGTaGCCCCTGAACCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPELGIW*PLNLRE
Trigger: TTCCCTGAGGTTCAGGGGCAACCAAATGCCCAGCTC...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCATGGGAGGCAGGATGCTaGCCCAGAAAGGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: ALILPPSSKLLLSSPHPPWEAGC*PRKVLS
Trigger: GGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCA...TGGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS TCA 90 bp TCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAGTCAGTaGCTCAGGGACTCAAGCCGCTTTCATCTTGAAACACTGCTATCT +
Preference number: 5 (lower is better)
Translates to: SRSQRLPAEVSHRSQ*LRDSSRFHLETLLS
Trigger: AGATAGCAGTGTTTCAAGATGAAAGCGGCTTGAGTCCCTGAGTCACTGACTTCTGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS CCA 90 bp TTGGGGTGGGATGTAGGGATCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTG +
Preference number: 5 (lower is better)
Translates to: LGWDVGISMVASKGS*VFLVPNSPPQPVPL
Trigger: CAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGATCCCTACATCCCACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CCA 90 bp CAGTCCTTACCTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTTaGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: QSLPLWWLLRVHGCS*SQTLLPNLFHWCLQ
Trigger: TTGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS-3UTR CAA 90 bp CTGTGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: LCIRRPSVIAQFPHVLGHCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...GTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAAAAGTTCCACACCAGTGCTaGCCGCACATCTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: WDIHSSSRSGGAGVMGTKVPHQC*PHILAL
Trigger: AAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAAC...TTTTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CAA 90 bp TGTATCAGAAGGCCCAGTGTCATAGCCCAGTTTCCTCATGTCCTTGGTCACCACTCCTTGGTCACCACGTaGAAGAGGAGGGTGACAAAG +
Preference number: 5 (lower is better)
Translates to: CIRRPSVIAQFPHVLGHHSLVTT*KRRVTK
Trigger: CTTTGTCACCCTCCTCTTCAACGTGGTGACCAAGGA...GTGGTGACCAAGGACATGAGGAAACTGGGCTATGACACTGGGCCTTCTGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000646248.1
ENST00000647252.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACACATCTCCAGGTTCATGGGTGTTCTaGGTCCCAAACTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: EKEGCVGCSWLRCSNTSPGSWVF*VPNSPP
Trigger: GGGAGGAGAGTTTGGGACCAAGAACACCCATGAACC...TGGAGATGTGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS-3UTR CAA 90 bp TCTGTGCAAGTGCCTGGCTCCTGGTGTCCACCCAAGGATAAGCAGACAAGCTTGGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SVQVPGSWCPPKDKQTSLETLLS*TDSPEG
Trigger: ACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTC...CAAGCTTGTCTGCTTATCCTTGGGTGGACACCAGGAGCCAGGCACTTGCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS-3UTR CAA 90 bp GGCAGCCCTTCATTATCAGAGACTGTGCAGCCTGTGGAGCCTTCACTGGGGGAATCAAGGAACAATGTGTaGCGGTATAGAAAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: GSPSLSETVQPVEPSLGESRNNV*RYRKGH
Trigger: GTGGCCTTTTCTATACCGCAACACATTGTTCCTTGA...TTCCCCCAGTGAAGGCTCCACAGGCTGCACAGTCTCTGATAATGAAGGGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663089.1
CDS-3UTR CAA 90 bp TGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCGAGTGCATGTCCCTGTaGCCCACTGCACTGATCATG +
Preference number: 5 (lower is better)
Translates to: CTNITSLFQTPTVLTSPTECMSL*PTALIM
Trigger: CATGATCAGTGCAGTGGGCAACAGGGACATGCACTC...GGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS CCA 90 bp ACTCTGGAAACTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTTaGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: TLETLWWLLRVHGCS*SQTLLPNLFHWCLQ
Trigger: TTGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGTTTCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487415.6
CDS-3UTR CAA 90 bp AATGGGACATCCATTCATCCAGTAGATCAGGAGGGGCTGGGGTTATGGGTACAATGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: NGTSIHPVDQEGLGLWVQCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...TTGTACCCATAACCCCAGCCCCTCCTGATCTACTGGATGAATGGATGTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS-3UTR CAA 90 bp AGGGGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTATTTCATGATGTGACTTaGAGGCCCCAACATGACAGC +
Preference number: 5 (lower is better)
Translates to: RGQERKKGVWDALGYAAVFHDVT*RPQHDS
Trigger: GCTGTCATGTTGGGGCCTCAAAGTCACATCATGAAA...TACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp CGCTGCAGTAACACATCTCCAGGTCTCAGCGGCTTCCCGCGGAAGTTTCTCACAGAAACATCTTTAACCTaGTGTGTCTGTGATCTCCTC +
Preference number: 5 (lower is better)
Translates to: RCSNTSPGLSGFPRKFLTETSLT*CVCDLL
Trigger: GAGGAGATCACAGACACACAAGGTTAAAGATGTTTC...TGTGAGAAACTTCCGCGGGAAGCCGCTGAGACCTGGAGATGTGTTACTGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671102.1
CDS-3UTR CAA 90 bp GGACAGGAGAGAAAGAAGGGTGTGTGGGATGCTCTTGGTTACGCTGCAGTAACAGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GQERKKGVWDALGYAAVTETLLS*TDSPEG
Trigger: ACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTC...TGTTACTGCAGCGTAACCAAGAGCATCCCACACACCCTTCTTTCTCTCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582857.2
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS TCA 90 bp GACCTGTTTCTATTTGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTaGGGAGGCGACCAGGCACAAACTTGTAAACTTCTGCAGTTTAGA +
Preference number: 5 (lower is better)
Translates to: DLFLFVLSGWSSLQI*GGDQAQTCKLLQFR
Trigger: TCTAAACTGCAGAAGTTTACAAGTTTGTGCCTGGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS CCA 90 bp AGGTCACCAGCTGATGGGATTACAATTCAGTCCTTACCTCTATGGTaGCTTCTAAGGGTTCATGGGTGTTCTTGGTCCCAAACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSPADGITIQSLPLW*LLRVHGCSWSQTLL
Trigger: GAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGAATTGTAATCCCATCAGCTGGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CCA 90 bp AGGTCATCATACTCTGGAAACTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTG +
Preference number: 5 (lower is better)
Translates to: RSSYSGNSMVASKGS*VFLVPNSPPQPVPL
Trigger: CAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGTTTCCAGAGTATGATGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487415.6
CDS TCA 90 bp TTGTCTGTGTGTCAACGTGTGTGTATAGGCGCCTGGAACCAGTTATaGTTTAGATCAACACCCCACTTTCAGCCTTGGCGAGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: LSVCQRVCIGAWNQL*FRSTPHFQPWRDSF
Trigger: GAAGGAATCTCGCCAAGGCTGAAAGTGGGGTGTTGATCTAAATCATAACTGGTTCCAGGCGCCTATACACACACGTTGACACACAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CCA 90 bp GATTACAATTCAGTCCTTACCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTG +
Preference number: 5 (lower is better)
Translates to: DYNSVLTSMVASKGS*VFLVPNSPPQPVPL
Trigger: CAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGAATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CCA 90 bp CTAAGGTCACCAGCTGATGGGATTACAATTCAGTCCTTACCTCTATaGTGGCTTCTAAGGGTTCATGGGTGTTCTTGGTCCCAAACTCTC +
Preference number: 5 (lower is better)
Translates to: LRSPADGITIQSLPL*WLLRVHGCSWSQTL
Trigger: GAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGAATTGTAATCCCATCAGCTGGTGACCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS-3UTR CAA 90 bp CATGAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAATGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: HEHFSHLTRVFPLLPQTQCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...TTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp GAGCATTTTTCCCATCTGACAAGAGTTTTTCCTCTGCTCCCTCAGACACAAAGATGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: EHFSHLTRVFPLLPQTQRCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...TCTTTGTGTCTGAGGGAGCAGAGGAAAAACTCTTGTCAGATGGGAAAAATGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268841.10
ENST00000440841.1
CDS-3UTR CAA 90 bp TGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTCACCTCACCCACCACTAGACTCGACTACTaGGGGTCAGTGATTCTTTTG +
Preference number: 5 (lower is better)
Translates to: CTNITSLFQTPTVLTSPTTRLDY*GSVILL
Trigger: CAAAAGAATCACTGACCCCAAGTAGTCGAGTCTAGT...GGTGGGTGAGGTGAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671102.1
ENST00000675510.1
CDS-3UTR CAA 90 bp AAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCAACTTTTCCACTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACG +
Preference number: 5 (lower is better)
Translates to: KSRWWVCGVHCKMMSTFPLSTCP*TMSRKT
Trigger: CGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAG...TGGAAAAGTTGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GTAATGGTAAAATCTAGGTGGTGGGTATGTGGTGTTCACTGTAAAATGATGTCATGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: VMVKSRWWVCGVHCKMMSCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...TGACATCATTTTACAGTGAACACCACATACCCACCACCTAGATTTTACCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp TGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGAACTGCTTGCCGCACATCTaGGCTCTTGGATGTGATCTG +
Preference number: 5 (lower is better)
Translates to: WIEAGMNSWIYVNIQVRNCLPHI*ALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA...GTTCCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS-3UTR CAA 90 bp GGATGGATTGAAGCAGGGATGAATAGTTGGATATATGTGAATATACAAGTACGGGTACGGAACAGGAAATaGGTAATGGTAAAATCTAGG +
Preference number: 5 (lower is better)
Translates to: GWIEAGMNSWIYVNIQVRVRNRK*VMVKSR
Trigger: CCTAGATTTTACCATTACCAATTTCCTGTTCCGTAC...CCGTACTTGTATATTCACATATATCCAACTATTCATCCCTGCTTCAATCCATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461069.6
ENST00000647056.1
ENST00000663089.1
CDS GCA 72 bp CCTAGGCCGCGCGCGGTTGCTAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGTAGCGCGCAGGACACG +
Preference number: 6 (lower is better)
Translates to: PRPRAVAKRRRR*PRNRRRSAQDT
Trigger: CGTGTCCTGCGCGCTACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261499.10
ENST00000395616.7
ENST00000477683.5
ENST00000647252.1
ENST00000663089.1
ENST00000675510.1
CDS CCA 72 bp CCCGCCGAAGCGCAGAGGCGAATGAGAGCTGAGTCCTaGGGAGCAGCGCTCCGACTCACGCCCTCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: PAEAQRRMRAES*GAALRLTPSAS
Trigger: GCTTGCTGAGGGCGTGAGTCGGAGCGCTGCTCCCCAGGACTCAGCTCTCATTCGCCTCTGCGCTTCGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574508.7
CDS TCA 72 bp CAGACAGCCCTGAAGGTGGCTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: QTALKVASRPSP*ATTLGSVYSGR
Trigger: GCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGCCACCTTCAGGGCTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
CDS GCA 72 bp ACTAGGCCGCGCGCGGTTGCTAAGAGACGCCGGCGTTaGCCTAGAAACAGACGGCGTAGCGCGCAGGACACG +
Preference number: 6 (lower is better)
Translates to: TRPRAVAKRRRR*PRNRRRSAQDT
Trigger: CGTGTCCTGCGCGCTACGCCGTCTGTTTCTAGGGCAACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575478.7
CDS CCA 72 bp CGGAAGCTGCGGAGAGGCTCAGCCACCGGAAGTCAGTaGAGGGTTCGGCCGGACGCTCTAGAATCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RKLRRGSATGSQ*RVRPDALESRR
Trigger: CCTCCGGGATTCTAGAGCGTCCGGCCGAACCCTCCACTGACTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476298.2
ENST00000477478.7
ENST00000582857.2
ENST00000645021.1
CDS CAA 90 bp GGCGTTGCCCTAGAAACAGACGGCGTAGCGCGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGAAGGCCACGCGAGTGCGCGTGTGGC +
Preference number: 6 (lower is better)
Translates to: GVALETDGVARRTRF*AATPSRRPRECACG
Trigger: GCCACACGCGCACTCGCGTGGCCTTCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCGCGCTACGCCGTCTGTTTCTAGGGCAACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261499.10
ENST00000395616.7
ENST00000575478.7
CDS TCA 72 bp AGAGGGGAGGGAGCTTTACCTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: RGEGALPSRPSP*ATTLGSVYSGR
Trigger: GCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGGTAAAGCTCCCTCCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477478.7
ENST00000575478.7
ENST00000647252.1
ENST00000663089.1
CDS TCA 72 bp AGCCCTGAAGGTGGCTTGACTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SPEGGLTSRPSP*ATTLGSVYSGR
Trigger: GCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGTCAAGCCACCTTCAGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS GCA 72 bp GGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTGCTaGAGTGTGGGTGAAGGGCCAGACCTTGTGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GRSGDSVNKGGC*SVGEGPDLVSG
Trigger: ACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476298.2
ENST00000487415.6
ENST00000645021.1
CDS CCA 72 bp GCGGGGACAGCGTTAACAAGGGCGGCTGCTGCAGTGTaGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: AGTALTRAAAAV*VKGQTLCQVPL
Trigger: CAGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645021.1
CDS TCA 72 bp TCAGCCTCAGCGTTCTCATCTTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCTGTGTACTCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SASAFSSSRPSP*ATTLGSVYSGR
Trigger: GCGGCCCGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGATGAGAACGCTGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395616.7
CDS GCA 72 bp GTGTCAGGTGCCCCTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: VSGAPRSQETAS*SPTWPEAAERL
Trigger: GAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGGGCACCTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS GCA 72 bp ACTGGGCGGAGCGGGGACAGCGTTAACAAGGGCGGCTaGTGCAGTGTGGGTGAAGGGCCAGACCTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: TGRSGDSVNKGG*CSVGEGPDLVS
Trigger: TGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGCTCCGCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476298.2
ENST00000487415.6
ENST00000645021.1
CDS CCA 72 bp CCTAGAAGCCAGGAAACCGCGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAG +
Preference number: 6 (lower is better)
Translates to: PRSQETASCSPT*PEAAERLSHRK
Trigger: CTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476298.2
ENST00000645021.1
CDS CCA 72 bp GCGGGGACAGCGTTAACAAGGGCGGCTGCTGCAGTGTaGGTGAAGGGCCAGACCTTGTGTCAGGTGCCCCTA +
Preference number: 6 (lower is better)
Translates to: AGTALTRAAAAV*VKGQTLCQVPL
Trigger: TAGGGGCACCTGACACAAGGTCTGGCCCTTCACCCACACTGCAGCAGCCGCCCTTGTTAACGCTGTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476298.2
ENST00000487415.6
CDS CCA 72 bp ACTAGAAGCCAGGAAACCGCGAGCTGCAGTCCAACTTaGCCGGAAGCTGCGGAGAGGCTCAGCCACCGGAAG +
Preference number: 6 (lower is better)
Translates to: TRSQETASCSPT*PEAAERLSHRK
Trigger: CTTCCGGTGGCTGAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000582857.2
CDS CCA 72 bp GAGGGTGACAAAGCCCTGAGAACGGACACGGGTCACTaGGGACAGAAGGGCAGCATCAGCCAGGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: EGDKALRTDTGH*GQKGSISQAGL
Trigger: AAGCCCAGCCTGGCTGATGCTGCCCTTCTGTCCCCAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646248.1
CDS CAA 72 bp CTAGAAACAGACGGCGTAGCGCGCAGGACACGTTTCTaGGCAGCGACACCTTCGCGAAGGCCACGCGAGTGC +
Preference number: 6 (lower is better)
Translates to: LETDGVARRTRF*AATPSRRPREC
Trigger: GCACTCGCGTGGCCTTCGCGAAGGTGTCGCTGCCAAGAAACGTGTCCTGCGCGCTACGCCGTCTGTTTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261499.10
ENST00000395616.7
ENST00000477683.5
ENST00000575478.7
ENST00000647252.1
CDS CCA 72 bp AGGCTGGGCTGGGGCAGAGAGAGACCCAGGTTGATCTaGGAATCTCAGCCTCAGCGTTCTCATCTTCCCGGC +
Preference number: 6 (lower is better)
Translates to: RLGWGRERPRLI*ESQPQRSHLPG
Trigger: GCCGGGAAGATGAGAACGCTGAGGCTGAGATTCCCAGATCAACCTGGGTCTCTCTCTGCCCCAGCCCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395616.7
CDS CAA 90 bp GAAGGGAGCCCCGTGACTCAGCACTCCCAGGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTGAGGAGGCGACC +
Preference number: 6 (lower is better)
Translates to: EGSPVTQHSQGTCFY*SSVGGAACRSEEAT
Trigger: GGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS TCA 72 bp CCACATCGTTCCCGAACACATCTGGTCCATACACGCTaGGCACGATCTGTGGCCAGCCGTAGGGGTTGGTGC +
Preference number: 6 (lower is better)
Translates to: PHRSRTHLVHTR*ARSVASRRGWC
Trigger: GCACCAACCCCTACGGCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000674596.1
ENST00000675510.1
CDS TCA 72 bp TTGGTCACCACGTTGAAGAGGAGGGTGACAAAGCCCTaGGAACGGACACGGGTCACTTCCCGGCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: LVTTLKRRVTKP*ERTRVTSRPSP
Trigger: GGGTGAAGGCCGGGAAGTGACCCGTGTCCGTTCTCAGGGCTTTGTCACCCTCCTCTTCAACGTGGTGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261499.10
ENST00000642870.2
CDS CAA 90 bp TCAATGGGGAAGTTCCACACCAGTGCTTGCCGCACATCTTGGCTCTaGGATGTGATCTGTGAGATCCCCTCCTCCAGACCCGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: SMGKFHTSACRTSWL*DVICEIPSSRPAVG
Trigger: CCCCACAGCGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000675510.1
CDS CAA 90 bp ATGACAAACCCTCTGTGCTCCAACCAGGCCCTCATCTGGGAACATTaGTGGGCTAGCTCCTATGTGCCTGGCAGGTCCCCGGCATTCACC +
Preference number: 6 (lower is better)
Translates to: MTNPLCSNQALIWEH*WASSYVPGRSPAFT
Trigger: GGTGAATGCCGGGGACCTGCCAGGCACATAGGAGCTAGCCCACAAATGTTCCCAGATGAGGGCCTGGTTGGAGCACAGAGGGTTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000647252.1
ENST00000663089.1
CDS GCA 72 bp CATACTCTGGAAACTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: HTLETRSQETAS*SPTWPEAAERL
Trigger: GAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGTTTCCAGAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477478.7
ENST00000582857.2
CDS CCA 72 bp CCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATCTGTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PIASNHIVPEHI*SIHAEHDLWPA
Trigger: GGCTGGCCACAGATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000646248.1
ENST00000647252.1
ENST00000674596.1
ENST00000675510.1
CDS CCA 72 bp GGAGTCCCATCAACCATCACCAGTTCAAGGGCCCAGTaGAGAGCCTGGTGTACTAGAAGTCCTTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GVPSTITSSRAQ*RAWCTRSPWAG
Trigger: GCCTGCCCAAGGACTTCTAGTACACCAGGCTCTCCACTGGGCCCTTGAACTGGTGATGGTTGATGGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CAA 72 bp GAGGTCATCATACTCTGGAAACTAGGCCGCGCGCGGTaGCTAAGAGACGCCGGCGTTGCCCTAGAAACAGAC +
Preference number: 6 (lower is better)
Translates to: EVIILWKLGRAR*LRDAGVALETD
Trigger: GTCTGTTTCTAGGGCAACGCCGGCGTCTCTTAGCAACCGCGCGCGGCCTAGTTTCCAGAGTATGATGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575478.7
CDS GCA 72 bp GCAGATATAATTCCTAGAAGCCAGGAAACCGCGAGCTaGAGTCCAACTTGGCCGGAAGCTGCGGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: ADIIPRSQETAS*SPTWPEAAERL
Trigger: GAGCCTCTCCGCAGCTTCCGGCCAAGTTGGACTGCAGCTCGCGGTTTCCTGGCTTCTAGGAATTATATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645021.1
CDS CCA 72 bp GGGACCCCAGGTCATCACATTCTGCAGCTTCTAGCTTaGGAGCAGACTAGGGGAGTCCCATCAACCATCACC +
Preference number: 6 (lower is better)
Translates to: GTPGHHILQLLA*EQTRGVPSTIT
Trigger: GGTGATGGTTGATGGGACTCCCCTAGTCTGCTCCCAAGCTAGAAGCTGCAGAATGTGATGACCTGGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CCA 72 bp CCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATAGCCGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: PIASNHIVPEHI*SIHAEHDSRRG
Trigger: ACCCCTACGGCTATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647056.1
CDS CAA 72 bp TCATACTCTGGAAACTGGGCGCTCTCCACCTGCCCGTaGACCATGAGTAGAAAGACGCTAGGACTCGCGGTC +
Preference number: 6 (lower is better)
Translates to: SYSGNWALSTCP*TMSRKTLGLAV
Trigger: GACCGCGAGTCCTAGCGTCTTTCTACTCATGGTCAACGGGCAGGTGGAGAGCGCCCAGTTTCCAGAGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000461069.6
ENST00000477683.5
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000675510.1
CDS CAA 72 bp CCCGTGACTCAGCACTCCCAGGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTGAG +
Preference number: 6 (lower is better)
Translates to: PVTQHSQGTCFY*SSVGGAACRSE
Trigger: CTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCTGAGTCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS TCA 72 bp TGCTTGCCGCACATCTTGGCTCTTGGATGTGATCTGTaGGATCCCCTCCTCCAGACCCTCTATGGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: CLPHILALGCDL*DPLLQTLYGGF
Trigger: GAAGCCACCATAGAGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS GCA 72 bp TGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTAGGCCG +
Preference number: 6 (lower is better)
Translates to: WGPSPGRTQSST*SRGHHTLETRP
Trigger: CGGCCTAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575478.7
CDS GCA 72 bp TGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACGCTCGAC +
Preference number: 6 (lower is better)
Translates to: WGPSPGRTQSST*SRGHHTLETLD
Trigger: GTCGAGCGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574508.7
CDS CCA 72 bp ATGGGGAAGTTCCACACCAGTGCTTGCCGCACATCTTaGCTCTTGGATGTGATCTGTGAGATCCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MGKFHTSACRTS*LLDVICEIPSS
Trigger: GGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS CCA 72 bp TCAACCATCACCAGTTCAAGGGCCCAGTGGAGAGCCTaGTGTACTAGAAGTCCTTGGGCAGGCTGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: STITSSRAQWRA*CTRSPWAGCPS
Trigger: TGAAGGACAGCCTGCCCAAGGACTTCTAGTACACCAGGCTCTCCACTGGGCCCTTGAACTGGTGATGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CCA 72 bp CCCATAGCCTCGAACCACATCGTTCCCGAACACATCTaGTCCATACACGCTGAGCACGATCTGTGGCCCTTT +
Preference number: 6 (lower is better)
Translates to: PIASNHIVPEHI*SIHAEHDLWPF
Trigger: AAAGGGCCACAGATCGTGCTCAGCGTGTATGGACCAGATGTGTTCGGGAACGATGTGGTTCGAGGCTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000663089.1
ENST00000671102.1
CDS CAA 72 bp AAGTTCCACACCAGTGCTTGCCGCACATCTTGGCTCTaGGATGTGATCTGTGAGATCCCCTCCTCCAGACCC +
Preference number: 6 (lower is better)
Translates to: KFHTSACRTSWL*DVICEIPSSRP
Trigger: GGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS CAA 72 bp CCCGTGACTCAGCACTCCCAGGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTTGT +
Preference number: 6 (lower is better)
Translates to: PVTQHSQGTCFY*SSVGGAACRSC
Trigger: ACAAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCTGAGTCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS CAA 90 bp GAAGGGAGCCCCGTGACTCAGCACTCCCAGGGGACCTGTTTCTATTaGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTTGTAAACTTCTG +
Preference number: 6 (lower is better)
Translates to: EGSPVTQHSQGTCFY*SSVGGAACRSCKLL
Trigger: CAGAAGTTTACAAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCTGAGTCACGGGGCTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS CAA 90 bp TCCTCCAGACCCTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTaGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SSRPSMVASKGSWVF*VPNSPPQPVPLVPA
Trigger: TGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGGTCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CAA 90 bp TCAATGGGGAAGTTCCACACCAGTGCTTGCCGCACATCTTGGCTCTaGGATGTGATCTGTGAGATCCCCTCCTCCAGACCCTCTATGGTG +
Preference number: 6 (lower is better)
Translates to: SMGKFHTSACRTSWL*DVICEIPSSRPSMV
Trigger: CACCATAGAGGGTCTGGAGGAGGGGATCTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CCA 72 bp TCCTCCAGACCCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCT +
Preference number: 6 (lower is better)
Translates to: SSRPSMVASKGS*VFLVPNSPPQP
Trigger: AGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGGTCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CAA 72 bp TTCTTGGTCCCAAACTCTCCTCCCCAACCTGTTCCATaGGTGCCTGCAATACCCCTAGAAGCCAGGAAACCG +
Preference number: 6 (lower is better)
Translates to: FLVPNSPPQPVP*VPAIPLEARKP
Trigger: CGGTTTCCTGGCTTCTAGGGGTATTGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468679.4
ENST00000674596.1
CDS TCA 72 bp AGTCAGGTTGGAGGAGAAGGTAGTTTCTGCAGATGCTaGCACACAGCGATCTCAGCAGGACACTCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: SQVGGEGSFCRC*HTAISAGHSAA
Trigger: AGCTGCAGAGTGTCCTGCTGAGATCGCTGTGTGTCAGCATCTGCAGAAACTACCTTCTCCTCCAACCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS GCA 72 bp TGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTAGAAGC +
Preference number: 6 (lower is better)
Translates to: WGPSPGRTQSST*SRGHHTLETRS
Trigger: GCTTCTAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477478.7
ENST00000582857.2
ENST00000642870.2
CDS GCA 72 bp TGGGGGCCCAGTCCTGGCCGTACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTCTATGG +
Preference number: 6 (lower is better)
Translates to: WGPSPGRTQSST*SRGHHTLETLW
Trigger: CCATAGAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTACGGCCAGGACTGGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487415.6
CDS CAA 72 bp GACTCAAGCCGCTTTCATCTTGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGTGGCTTCCCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: DSSRFHLETLLS*TDSPEGGFPAF
Trigger: GAAGGCCGGGAAGCCACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTCAAGATGAAAGCGGCTTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582857.2
ENST00000671102.1
CDS CAA 90 bp GATGTAGGGATCTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTaGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: DVGISMVASKGSWVF*VPNSPPQPVPLVPA
Trigger: TGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGATCCCTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CAA 90 bp TCAGTCCTTACCTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTaGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SVLTSMVASKGSWVF*VPNSPPQPVPLVPA
Trigger: TGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CAA 90 bp TACTCTGGAAACTCTATGGTGGCTTCTAAGGGTTCATGGGTGTTCTaGGTCCCAAACTCTCCTCCCCAACCTGTTCCATTGGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: YSGNSMVASKGSWVF*VPNSPPQPVPLVPA
Trigger: TGCAGGCACCAATGGAACAGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGTTTCCAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487415.6
CDS TCA 72 bp CTATTTGTCCTCAGTGGGTGGAGCAGCTTGCAGATCTaGGGAGGCGACCAGGCACAAACTTGTAAACTTCTG +
Preference number: 6 (lower is better)
Translates to: LFVLSGWSSLQI*GGDQAQTCKLL
Trigger: CAGAAGTTTACAAGTTTGTGCCTGGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS GCA 72 bp AAGGTGACATCAATGGGGAAGTTCCACACCAGTGCTTaGCGCACATCTTGGCTCTTGGATGTGATCTGTGAG +
Preference number: 6 (lower is better)
Translates to: KVTSMGKFHTSA*RTSWLLDVICE
Trigger: CTCACAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGATGTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS GCA 72 bp ACCTGTTTCTATTTGTCCTCAGTGGGTGGAGCAGCTTaGAGATCTGAGGAGGCGACCAGGCACAAACTTGTA +
Preference number: 6 (lower is better)
Translates to: TCFYLSSVGGAA*RSEEATRHKLV
Trigger: TACAAGTTTGTGCCTGGTCGCCTCCTCAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS CCA 72 bp AGCACTCCCAGGGGACCTGTTTCTATTTGTCCTCAGTaGGTGGAGCAGCTTGCAGATCTTGTAAACTTCTGC +
Preference number: 6 (lower is better)
Translates to: STPRGPVSICPQ*VEQLADLVNFC
Trigger: GCAGAAGTTTACAAGATCTGCAAGCTGCTCCACCCACTGAGGACAAATAGAAACAGGTCCCCTGGGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS CCA 72 bp GATGTAGGGATCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCT +
Preference number: 6 (lower is better)
Translates to: DVGISMVASKGS*VFLVPNSPPQP
Trigger: AGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGATCCCTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468679.4
CDS CCA 72 bp TCAGTCCTTACCTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCT +
Preference number: 6 (lower is better)
Translates to: SVLTSMVASKGS*VFLVPNSPPQP
Trigger: AGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CAA 72 bp GACTCAAGCCGCTTTCATCTTGAAACACTGCTATCTTaGACAGACAGCCCTGAAGGTGGCTTGACTTCCCGG +
Preference number: 6 (lower is better)
Translates to: DSSRFHLETLLS*TDSPEGGLTSR
Trigger: CCGGGAAGTCAAGCCACCTTCAGGGCTGTCTGTCAAAGATAGCAGTGTTTCAAGATGAAAGCGGCTTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674596.1
CDS CCA 72 bp CCAGCTTGTAAACTTCTGCAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGTCCTTTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: PACKLLQFRRRF*DKHGDGPFVPA
Trigger: GGCCGGCACAAAAGGACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAACTGCAGAAGTTTACAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000261499.10
ENST00000395616.7
ENST00000461069.6
ENST00000477478.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000646248.1
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000674596.1
CDS CCA 72 bp TACTCTGGAAACTCTATGGTGGCTTCTAAGGGTTCATaGGTGTTCTTGGTCCCAAACTCTCCTCCCCAACCT +
Preference number: 6 (lower is better)
Translates to: YSGNSMVASKGS*VFLVPNSPPQP
Trigger: AGGTTGGGGAGGAGAGTTTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGTTTCCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487415.6
CDS CCA 72 bp GTGGCTTGTAAACTTCTGCAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGTCCTTTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: VACKLLQFRRRF*DKHGDGPFVPA
Trigger: GGCCGGCACAAAAGGACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAACTGCAGAAGTTTACAAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675510.1
CDS TCA 72 bp TGTCAACGTGTGTGTATAGGCGCCTGGAACCAGTTATaGTTTAGATCAACACCCCACTTTCAGCCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: CQRVCIGAWNQL*FRSTPHFQPWR
Trigger: TCGCCAAGGCTGAAAGTGGGGTGTTGATCTAAATCATAACTGGTTCCAGGCGCCTATACACACACGTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS GCA 72 bp TTTAAAGGTGACATCAATGGGGAAGTTCCACACCAGTaGTTGCCGCACATCTTGGCTCTTGGATGTGATCTG +
Preference number: 6 (lower is better)
Translates to: FKGDINGEVPHQ*LPHILALGCDL
Trigger: CAGATCACATCCAAGAGCCAAGATGTGCGGCAAGCACTGGTGTGGAACTTCCCCATTGATGTCACCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000261499.10
ENST00000268841.10
ENST00000395616.7
ENST00000440841.1
ENST00000461069.6
ENST00000477478.7
ENST00000477683.5
ENST00000574508.7
ENST00000575478.7
ENST00000582857.2
ENST00000642870.2
ENST00000647056.1
ENST00000647252.1
ENST00000663089.1
ENST00000671102.1
ENST00000674596.1
ENST00000675510.1
CDS CCA 72 bp CCAGCTGATGGGATTACAATTCAGTCCTTACCTCTATaGTGGCTTCTAAGGGTTCATGGGTGTTCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: PADGITIQSLPL*WLLRVHGCSWS
Trigger: GGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGAATTGTAATCCCATCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CCA 72 bp TCACCTTGTAAACTTCTGCAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGTCCTTTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: SPCKLLQFRRRF*DKHGDGPFVPA
Trigger: GGCCGGCACAAAAGGACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAACTGCAGAAGTTTACAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477683.5
CDS CCA 72 bp CAAACTTGTAAACTTCTGCAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGTCCTTTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: QTCKLLQFRRRF*DKHGDGPFVPA
Trigger: GGCCGGCACAAAAGGACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAACTGCAGAAGTTTACAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268841.10
CDS CCA 72 bp AGATCTTGTAAACTTCTGCAGTTTAGACGTAGATTCTaGGACAAACATGGGGATGGTCCTTTTGTGCCGGCC +
Preference number: 6 (lower is better)
Translates to: RSCKLLQFRRRF*DKHGDGPFVPA
Trigger: GGCCGGCACAAAAGGACCATCCCCATGTTTGTCCCAGAATCTACGTCTAAACTGCAGAAGTTTACAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440841.1
CDS CCA 72 bp GCTGATGGGATTACAATTCAGTCCTTACCTCTATGGTaGCTTCTAAGGGTTCATGGGTGTTCTTGGTCCCAA +
Preference number: 6 (lower is better)
Translates to: ADGITIQSLPLW*LLRVHGCSWSQ
Trigger: TTGGGACCAAGAACACCCATGAACCCTTAGAAGCCACCATAGAGGTAAGGACTGAATTGTAATCCCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CAA 72 bp CAAATCTTTGTGAATGTAAACCTGTACCTAAGAGTGTaGTCTGTGTGTCAACGTGTGTGTATAGGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: QIFVNVNLYLRV*SVCQRVCIGAW
Trigger: CCAGGCGCCTATACACACACGTTGACACACAGACAACACTCTTAGGTACAGGTTTACATTCACAAAGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2
CDS CAA 90 bp GTGTTTGTGCAAATCTTTGTGAATGTAAACCTGTACCTAAGAGTGTaGTCTGTGTGTCAACGTGTGTGTATAGGCGCCTGGAACCAGTTA +
Preference number: 6 (lower is better)
Translates to: VFVQIFVNVNLYLRV*SVCQRVCIGAWNQL
Trigger: TAACTGGTTCCAGGCGCCTATACACACACGTTGACACACAGACAACACTCTTAGGTACAGGTTTACATTCACAAAGATTTGCACAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476298.2