RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B4GALT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000158470

Ensembl transcript IDs: ENST00000371711.4

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTaGTCTAACAGCAGCCTCCCGCTTAGCGGAGAGTGGGATGAGCAC +
Preference number: 1 (lower is better)
Translates to: VCSEPRRACFRQEAA*SNSSLPLSGEWDEH
Trigger: GTGCTCATCCCACTCTCCGCTAAGCGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR GCA 90 bp AGCCTGGAGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTaGTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCCTCCCGCTT +
Preference number: 1 (lower is better)
Translates to: SLESQRCVCSEPRRA*FRQEAACSNSSLPL
Trigger: AAGCGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCTCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 90 bp CAGGAAGCAGCCTGCTCTAACAGCAGCCTCCCGCTTAGCGGAGAGTaGGATGAGCACATGCGCGGCCGACAGGGAAGAGTGAATCCAGAG +
Preference number: 1 (lower is better)
Translates to: QEAACSNSSLPLSGE*DEHMRGRQGRVNPE
Trigger: CTCTGGATTCACTCTTCCCTGTCGGCCGCGCATGTGCTCATCCCACTCTCCGCTAAGCGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp GCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGTTCCAGCGGCTaGTCCAGTGAAGGCGTTTGTGCGTGTGCTGTCACATTTTCCCCC +
Preference number: 1 (lower is better)
Translates to: ADEGSPQAHSLSSSG*SSEGVCACAVTFSP
Trigger: GGGGGAAAATGTGACAGCACACGCACAAACGCCTTCACTGGATCAGCCGCTGGAACTGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp CTCTTCCTAAAACGCAGCTGCCCTGTGGTGGGTTTGCCTCTGCTCTaGAGGCCAAGAGGCTCCAAGGTCATGTGTAGGGACAGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: LFLKRSCPVVGLPLL*RPRGSKVMCRDRLH
Trigger: GTGGAGCCTGTCCCTACACATGACCTTGGAGCCTCTTGGCCTTCAGAGCAGAGGCAAACCCACCACAGGGCAGCTGCGTTTTAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp AGCAGCGGGACAGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTaGCGAAGGAAGTCCCCAAGCTCACTCCCTCAGTTCCAGCGGCTG +
Preference number: 1 (lower is better)
Translates to: SSGTDVCLVKTESQC*RRKSPSSLPQFQRL
Trigger: CAGCCGCTGGAACTGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCTGTCCCGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 90 bp TGGAGCTTTGTTAGTCTAATTTCAAAGCTTCAATCCGGTCTTACCTaGATCCCAGCTGCCCCACAGCACACAAGTGTCACCAGCTCCCTG +
Preference number: 1 (lower is better)
Translates to: WSFVSLISKLQSGLT*IPAAPQHTSVTSSL
Trigger: CAGGGAGCTGGTGACACTTGTGTGCTGTGGGGCAGCTGGGATCCAGGTAAGACCGGATTGAAGCTTTGAAATTAGACTAACAAAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp GCACACGGGCCTGGCTGTACGTTTTTAACTATGACATTTCCCATATaGTATTCGAGGCCTGGTGGACACATGACTGACAGTGCACATCCA +
Preference number: 1 (lower is better)
Translates to: AHGPGCTFLTMTFPI*YSRPGGHMTDSAHP
Trigger: TGGATGTGCACTGTCAGTCATGTGTCCACCAGGCCTCGAATATCATATGGGAAATGTCATAGTTAAAAACGTACAGCCAGGCCCGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp GCACCCAGGACTCAGAATCAGTCTGTCCTGGCAAATCCTTCCAAATaGCATCATAGTGTTGTCACATTGAAAGCAACTCACAGCCTTCAG +
Preference number: 1 (lower is better)
Translates to: APRTQNQSVLANPSK*HHSVVTLKATHSLQ
Trigger: CTGAAGGCTGTGAGTTGCTTTCAATGTGACAACACTATGATGTCATTTGGAAGGATTTGCCAGGACAGACTGATTCTGAGTCCTGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp CTGACAGTGCACATCCAGAGATTCTACACTCATCAGACACAGACATaGCCGCAAAGGTATCAAAGTGACCCCACTTTAAGCAGTGAAAAA +
Preference number: 1 (lower is better)
Translates to: LTVHIQRFYTHQTQT*PQRYQSDPTLSSEK
Trigger: TTTTTCACTGCTTAAAGTGGGGTCACTTTGATACCTTTGCGGTCATGTCTGTGTCTGATGAGTGTAGAATCTCTGGATGTGCACTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp TATGACATTTCCCATATGATATTCGAGGCCTGGTGGACACATGACTaGCAGTGCACATCCAGAGATTCTACACTCATCAGACACAGACAT +
Preference number: 1 (lower is better)
Translates to: YDISHMIFEAWWTHD*QCTSRDSTLIRHRH
Trigger: ATGTCTGTGTCTGATGAGTGTAGAATCTCTGGATGTGCACTGTCAGTCATGTGTCCACCAGGCCTCGAATATCATATGGGAAATGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 90 bp AATAATATGACTTCAAAATGCAGGTGGGGGTGTGAGCAGTGCACCTaGGCTCTTGCTGTCTGGAGCTTTGTTAGTCTAATTTCAAAGCTT +
Preference number: 1 (lower is better)
Translates to: NNMTSKCRWGCEQCT*ALAVWSFVSLISKL
Trigger: AAGCTTTGAAATTAGACTAACAAAGCTCCAGACAGCAAGAGCCCAGGTGCACTGCTCACACCCCCACCTGCATTTTGAAGTCATATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 90 bp GATGGAAATAAGCTAGCTACGCTCAATGCCATCGTCAATGGTGAGTaGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCT +
Preference number: 1 (lower is better)
Translates to: DGNKLATLNAIVNGE*IQSIHVAPAQLLMS
Trigger: AGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACCATTGACGATGGCATTGAGCGTAGCTAGCTTATTTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 90 bp AGTGACAGCAATTCGGGAGATGACATTCTTCAACTGCATTTTAACTaGGTTCCTGCACTTGCCAACCAAGTAAGTGGCCTAATACATAAA +
Preference number: 1 (lower is better)
Translates to: SDSNSGDDILQLHFN*VPALANQVSGLIHK
Trigger: TTTATGTATTAGGCCACTTACTTGGTTGGCAAGTGCAGGAACTCAGTTAAAATGCAGTTGAAGAATGTCATCTCCCGAATTGCTGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCACAGAAAGCCAGTGCTaGCGAAGGAAGTCCCCAAGC +
Preference number: 2 (lower is better)
Translates to: SEPRRACFRQEAACSNSSTESQC*RRKSPS
Trigger: GCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGT...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCAAAATCTCATCGGACTaGTTTCTTGGTGGCGGTGGG +
Preference number: 2 (lower is better)
Translates to: SEPRRACFRQEAACSNSSKISSD*FLGGGG
Trigger: CCCACCGCCACCAAGAAAGCAGTCCGATGAGATTTT...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGAGGCAGGAAGCAGCCTaGTCTAACAGCAGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALRQEAA*SNSSLP
Trigger: CGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTGCCT...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATAGCCAGAGATGTGTGTaGAGCGAGCCCCGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDSQRCV*SEPRRA
Trigger: GGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCT...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGGCAGCTGCCCTGTGGTaGGTTTGCCTCTGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALAAALW*VCLCSE
Trigger: TTCAGAGCAGAGGCAAACCCACCACAGGGCAGCTGC...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGCTCAGTTCCAGCGGCTaGTCCAGTGAAGGCGTTTGT +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALLSSSG*SSEGVC
Trigger: ACAAACGCCTTCACTGGATCAGCCGCTGGAACTGAG...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCAATTCGGGAGATaGCATTCTTCAACTGCATTT +
Preference number: 2 (lower is better)
Translates to: RARDVCAASPEGPALGRKQQFGR*HSSTAF
Trigger: AAATGCAGTTGAAGAATGTCATCTCCCGAATTGCTG...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGTACCTGGATCCCAGCTaGCCCACAGCACACAAGTGT +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALYLDPS*PTAHKC
Trigger: ACACTTGTGTGCTGTGGGGCAGCTGGGATCCAGGTA...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGCAGCGGCTGATCCAGTaGAGGCGTTTGTGCGTGTGC +
Preference number: 2 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVQRLIQ*RRLCVC
Trigger: GCACACGCACAAACGCCTTCACTGGATCAGCCGCTG...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATAGATGGAGGCTGCAGTaGGCTGTGATCGTGCCACCA +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDRWRLQ*AVIVPP
Trigger: TGGTGGCACGATCACAGCTCACTGCAGCCTCCATCT...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATAGGCGTTTGTGCGTGTaGTGTCACATTTTCCCCCTG +
Preference number: 2 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHRRLCV*CHIFPL
Trigger: CAGGGGGAAAATGTGACAGCACACGCACAAACGCCT...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGGACTGCTTTCTTGGTaGCGGTGGGTAAAGCAAACG +
Preference number: 2 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSGLLSW*RWVKQT
Trigger: CGTTTGCTTTACCCACCGCCACCAAGAAAGCAGTCC...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATCAATCCGGTCTTACCTaGATCCCAGCTGCCCCACAG +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDQSGLT*IPAAPQ
Trigger: CTGTGGGGCAGCTGGGATCCAGGTAAGACCGGATTG...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGGGTTTGCCTCTGCTCTaGAGGCCAAGAGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVGLPLL*RPRGSK
Trigger: CTTGGAGCCTCTTGGCCTTCAGAGCAGAGGCAAACC...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCTTCCTAAAACGCAGCTaGCCTGTGGTGGGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPFLKRS*PVVGLP
Trigger: AGGCAAACCCACCACAGGGCAGCTGCGTTTTAGGAA...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAATCGGACTGCTTTCTTaGTGGCGGTGGGTAAAGCAA +
Preference number: 2 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSIGLLS*WRWVKQ
Trigger: TTGCTTTACCCACCGCCACCAAGAAAGCAGTCCGAT...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATGATCACAGTTCATCATaGGTTCTGGAGACTGCGGCT +
Preference number: 2 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHDHSSS*VLETAA
Trigger: AGCCGCAGTCTCCAGAACCCATGATGAACTGTGATC...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGACAGAACACGAAGCCTaGAGAGCCAGAGATGTGTGT +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALTEHEA*RARDVC
Trigger: ACACACATCTCTGGCTCTCCAGGCTTCGTGTTCTGT...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGTCCTGGCTCCCTATTTaGGTGCTCCTTGGTTCTATG +
Preference number: 2 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQSWLPI*VLLGSM
Trigger: CATAGAACCAAGGAGCACTCAAATAGGGAGCCAGGA...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTTGGGGGTGTGAGCAGTaGACCTGGGCTCTTGCTGTC +
Preference number: 2 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFWGCEQ*TWALAV
Trigger: GACAGCAAGAGCCCAGGTGCACTGCTCACACCCCCA...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATGTTCATCATGGGTTCTaGAGACTGCGGCTAAGACAG +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDVHHGF*RLRLRQ
Trigger: CTGTCTTAGCCGCAGTCTCCAGAACCCATGATGAAC...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGAAACAAAACAAGGCCTaGCCAATCACTCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALKQNKA*PITPTV
Trigger: AACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTT...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 90 bp AGAAAGGGACAGAAGCCAGCTCCCAGCAATAAAGGTCGGGTTATTTaGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: RKGQKPAPSNKGRVI*FFCDMPYIHSLAKV
Trigger: CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTTATTGCTGGGAGCTGGCTTCTGTCCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTAACGCAGCTGCCCTGTaGTGGGTTTGCCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFNAAAL*WVCLCS
Trigger: AGAGCAGAGGCAAACCCACCACAGGGCAGCTGCGTT...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATCAACTGCATTTTAACTaGGTTCCTGCACTTGCCAAC +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDQLHFN*VPALAN
Trigger: GTTGGCAAGTGCAGGAACTCAGTTAAAATGCAGTTG...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATCTCTGTGATCCTTCATaGGACACAGTATTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDLCDPS*DTVFLF
Trigger: GAACAGAAATACTGTGTCTCATGAAGGATCACAGAG...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGTCTAGAAGAATGGTGTaGAGTTTCATTTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQSRRMV*SFICSS
Trigger: GGAAGAGCAAATGAAACTCCACACCATTCTTCTAGA...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGTTGAGGGCTTTGGTTTaGGGAAAAACAAAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVLRALV*GKTKRH
Trigger: GTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAA...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGAACAGCACACGGGCCTaGCTGTACGTTTTTAACTAT +
Preference number: 2 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVNSTRA*LYVFNY
Trigger: ATAGTTAAAAACGTACAGCCAGGCCCGTGTGCTGTT...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATGCAAATCCTTCCAAATaGCATCATAGTGTTGTCACA +
Preference number: 2 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDANPSK*HHSVVT
Trigger: TGTGACAACACTATGATGTCATTTGGAAGGATTTGC...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 90 bp ACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTaGTGGGGATCATATGTCCACAGAACCATCACATGCAACGAAAAA +
Preference number: 2 (lower is better)
Translates to: TNKQTKQGLANHSHS*WGSYVHRTITCNEK
Trigger: TTTTTCGTTGCATGTGATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR TCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTCAGACGTCTGTCTTGTaGAAACAGAAAGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFQTSVL*KQKASA
Trigger: AGCACTGGCTTTCTGTTTTCACAAGACAGACGTCTG...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCATGACATTCTTCAACTaGATTTTAACTGAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPMTFFN*ILTEFL
Trigger: CAGGAACTCAGTTAAAATGCAGTTGAAGAATGTCAT...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 90 bp ACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTaGAAGATTTTCAGCTACCAATATATGCACAAGGTCACATTTGGT +
Preference number: 2 (lower is better)
Translates to: TQQSKTRLRGHPSVA*KIFSYQYMHKVTFG
Trigger: ACCAAATGTGACCTTGTGCATATATTGGTAGCTGAAAATCTTCAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR GCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGTCAGCTACCAATATATaGACAAGGTCACATTTGGTT +
Preference number: 2 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVSATNI*TRSHLV
Trigger: AACCAAATGTGACCTTGTGCATATATTGGTAGCTGA...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTCTTTCTTGGTGGCGGTaGGTAAAGCAAACGTACATT +
Preference number: 2 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFLSWWR*VKQTYI
Trigger: AATGTACGTTTGCTTTACCCACCGCCACCAAGAAAG...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 90 bp GAATTCTGCAGAAGCCGACAGAGACTACAATTTGAGGGCTTTGGTTaGGGGAAAAACAAAGAGGCACAAATTCAAATACAATTTAGAACA +
Preference number: 2 (lower is better)
Translates to: EFCRSRQRLQFEGFG*GKNKEAQIQIQFRT
Trigger: TGTTCTAAATTGTATTTGAATTTGTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTCGGCTTCTGCAGAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 90 bp TTCCAGAATTCTGCAGAAGCCGACAGAGACTACAATTTGAGGGCTTaGGTTTGGGGAAAAACAAAGAGGCACAAATTCAAATACAATTTA +
Preference number: 2 (lower is better)
Translates to: FQNSAEADRDYNLRA*VWGKTKRHKFKYNL
Trigger: TAAATTGTATTTGAATTTGTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTCGGCTTCTGCAGAATTCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR GCA 72 bp GAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTaGTCTAACAGCAGCCTCCCGCTTAGCGGAGAGTGG +
Preference number: 3 (lower is better)
Translates to: EPRRACFRQEAA*SNSSLPLSGEW
Trigger: CCACTCTCCGCTAAGCGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 72 bp GCCTGCTCTAACAGCAGCCTCCCGCTTAGCGGAGAGTaGGATGAGCACATGCGCGGCCGACAGGGAAGAGTG +
Preference number: 3 (lower is better)
Translates to: ACSNSSLPLSGE*DEHMRGRQGRV
Trigger: CACTCTTCCCTGTCGGCCGCGCATGTGCTCATCCCACTCTCCGCTAAGCGGGAGGCTGCTGTTAGAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 72 bp GACCACGGCAGGACCACGGCAGATCACAGTTCATCATaGGTTCTGGAGACTGCGGCTAAGACAGGATGTGGG +
Preference number: 3 (lower is better)
Translates to: DHGRTTADHSSS*VLETAAKTGCG
Trigger: CCCACATCCTGTCTTAGCCGCAGTCTCCAGAACCCATGATGAACTGTGATCTGCCGTGGTCCTGCCGTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp CCAAGCTCACTCCCTCAGTTCCAGCGGCTGATCCAGTaGAGGCGTTTGTGCGTGTGCTGTCACATTTTCCCC +
Preference number: 3 (lower is better)
Translates to: PSSLPQFQRLIQ*RRLCVCCHIFP
Trigger: GGGGAAAATGTGACAGCACACGCACAAACGCCTTCACTGGATCAGCCGCTGGAACTGAGGGAGTGAGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATCATCGGACTGCTTTCTaGGTGGCGGTGGGTAAAGCA +
Preference number: 3 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHHRTAF*VAVGKA
Trigger: TGCTTTACCCACCGCCACCAAGAAAGCAGTCCGATG...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp ACAGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTaGCGAAGGAAGTCCCCAAGCTCACTCCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: TDVCLVKTESQC*RRKSPSSLPQF
Trigger: GAACTGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 72 bp ACTTCAAAATGCAGGTGGGGGTGTGAGCAGTGCACCTaGGCTCTTGCTGTCTGGAGCTTTGTTAGTCTAATT +
Preference number: 3 (lower is better)
Translates to: TSKCRWGCEQCT*ALAVWSFVSLI
Trigger: AATTAGACTAACAAAGCTCCAGACAGCAAGAGCCCAGGTGCACTGCTCACACCCCCACCTGCATTTTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATCTCCTGGCTCCCTATTaGAGTGCTCCTTGGTTCTAT +
Preference number: 3 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDLLAPY*SAPWFY
Trigger: ATAGAACCAAGGAGCACTCAAATAGGGAGCCAGGAG...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGGACAGAGACTACAATTaGAGGGCTTTGGTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQDRDYN*RALVWG
Trigger: TCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTC...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 72 bp ACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTaGGGATCATATGTCCACAGAACCATCACATGCAAC +
Preference number: 3 (lower is better)
Translates to: TKQGLANHSHSL*GSYVHRTITCN
Trigger: GTTGCATGTGATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CCA 72 bp AAGCTAGCTACGCTCAATGCCATCGTCAATGGTGAGTaGATACAATCAATCCATGTGGCTCCTGCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: KLATLNAIVNGE*IQSIHVAPAQL
Trigger: TAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACCATTGACGATGGCATTGAGCGTAGCTAGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAAAGGTCGGGTTATTTaGTTCTTTTGTGACATGCCC +
Preference number: 3 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQKGRVI*FFCDMP
Trigger: GGGCATGTCACAAAAGAACAAAATAACCCGACCTTT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp TCCCATATGATATTCGAGGCCTGGTGGACACATGACTaGCAGTGCACATCCAGAGATTCTACACTCATCAGA +
Preference number: 3 (lower is better)
Translates to: SHMIFEAWWTHD*QCTSRDSTLIR
Trigger: TCTGATGAGTGTAGAATCTCTGGATGTGCACTGTCAGTCATGTGTCCACCAGGCCTCGAATATCATATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGCTATTTGAGTGCTCCTaGGTTCTATGTATCAGTTAC +
Preference number: 3 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQLFECS*VLCISY
Trigger: GTAACTGATACATAGAACCAAGGAGCACTCAAATAG...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGTTTGAGGGCTTTGGTTaGGGGAAAAACAAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVFEGFG*GKNKEA
Trigger: TGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAA...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGGAGCCGATAAGAGCTTaGCAATGCAATTTATTTTCT +
Preference number: 3 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALEPIRA*QCNLFS
Trigger: AGAAAATAAATTGCATTGCAAAGCTCTTATCGGCTC...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp CACATCCAGAGATTCTACACTCATCAGACACAGACATaGCCGCAAAGGTATCAAAGTGACCCCACTTTAAGC +
Preference number: 3 (lower is better)
Translates to: HIQRFYTHQTQT*PQRYQSDPTLS
Trigger: GCTTAAAGTGGGGTCACTTTGATACCTTTGCGGTCATGTCTGTGTCTGATGAGTGTAGAATCTCTGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp CATTTCCCATATGATATTCGAGGCCTGGTGGACACATaGCTGACAGTGCACATCCAGAGATTCTACACTCAT +
Preference number: 3 (lower is better)
Translates to: HFPYDIRGLVDT*LTVHIQRFYTH
Trigger: ATGAGTGTAGAATCTCTGGATGTGCACTGTCAGTCATGTGTCCACCAGGCCTCGAATATCATATGGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTAGTATTTCTGTTCTCTaGCTGTGTAGACCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFSISVL*LCRPSP
Trigger: GGGGGAGGGTCTACACAGCAAGAGAACAGAAATACT...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR-3UTR CAA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATTACAATTTGAGGGCTTaGGTTTGGGGAAAAACAAAG +
Preference number: 3 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDYNLRA*VWGKTK
Trigger: CTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTA...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp CCTGGCTGTACGTTTTTAACTATGACATTTCCCATATaGTATTCGAGGCCTGGTGGACACATGACTGACAGT +
Preference number: 3 (lower is better)
Translates to: PGCTFLTMTFPI*YSRPGGHMTDS
Trigger: ACTGTCAGTCATGTGTCCACCAGGCCTCGAATATCATATGGGAAATGTCATAGTTAAAAACGTACAGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp AATTCGGGAGATGACATTCTTCAACTGCATTTTAACTaGGTTCCTGCACTTGCCAACCAAGTAAGTGGCCTA +
Preference number: 3 (lower is better)
Translates to: NSGDDILQLHFN*VPALANQVSGL
Trigger: TAGGCCACTTACTTGGTTGGCAAGTGCAGGAACTCAGTTAAAATGCAGTTGAAGAATGTCATCTCCCGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR GCA 72 bp AAAGTGACAGCAATTCGGGAGATGACATTCTTCAACTaGATTTTAACTGAGTTCCTGCACTTGCCAACCAAG +
Preference number: 3 (lower is better)
Translates to: KVTAIREMTFFN*ILTEFLHLPTK
Trigger: CTTGGTTGGCAAGTGCAGGAACTCAGTTAAAATGCAGTTGAAGAATGTCATCTCCCGAATTGCTGTCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR TCA 72 bp ACTCAGAATCAGTCTGTCCTGGCAAATCCTTCCAAATaGCATCATAGTGTTGTCACATTGAAAGCAACTCAC +
Preference number: 3 (lower is better)
Translates to: TQNQSVLANPSK*HHSVVTLKATH
Trigger: GTGAGTTGCTTTCAATGTGACAACACTATGATGTCATTTGGAAGGATTTGCCAGGACAGACTGATTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGGGGACAAAGGCCCGGTaGGGGATGGGGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKGTKAR*GMGVAG
Trigger: CCCTGCAACCCCCATCCCCCACCGGGCCTTTGTCCC...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGAGCCAGAGATGTGTGTaGAGCGAGCCCCGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKSQRCV*SEPRRA
Trigger: GGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCT...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCTGTGAGCAGTGCACCTaGGCTCTTGCTGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQICEQCT*ALAVWS
Trigger: GCTCCAGACAGCAAGAGCCCAGGTGCACTGCTCACA...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCGCAGCTGCCCTGTGGTaGGTTTGCCTCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSAAALW*VCLCSE
Trigger: TTCAGAGCAGAGGCAAACCCACCACAGGGCAGCTGC...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCTACCTGGATCCCAGCTaGCCCACAGCACACAAGTGT +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSYLDPS*PTAHKC
Trigger: ACACTTGTGTGCTGTGGGGCAGCTGGGATCCAGGTA...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGGTGTCTGAACAGGACTaGGAGGTGCTCGTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKVSEQD*EVLVAV
Trigger: AACCGCCACGAGCACCTCCCAGTCCTGTTCAGACAC...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCTCAGTTCCAGCGGCTaGTCCAGTGAAGGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKLSSSG*SSEGVC
Trigger: ACAAACGCCTTCACTGGATCAGCCGCTGGAACTGAG...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGGGTAGGTGTTCACTATaGCGGGCGCCACATAGACGA +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKGRCSL*RAPHRR
Trigger: TCGTCTATGTGGCGCCCGGCATAGTGAACACCTACC...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCAGGCCATCCAGCCCTTaGCGTTCTTTTGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSRPSSP*RSFDFL
Trigger: GAGGAAGTCAAAAGAACGGCAAGGGCTGGATGGCCT...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCGGGGACACCTTTCCCTaGACACAGCAATCAAAGACA +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIGDTFP*TQQSKT
Trigger: TGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCC...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCAGTTCGAGACCAGCCTaGGCAACATGGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSSSRPA*ATWKKP
Trigger: GGGTTTCTTCCATGTTGCCCAGGCTGGTCTCGAACT...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCGATCACAGTTCATCATaGGTTCTGGAGACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSDHSSS*VLETAA
Trigger: AGCCGCAGTCTCCAGAACCCATGATGAACTGTGATC...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATCAGTACTCGTTCACCTaGGCCAGCTCGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHQYSFT*ASSGVR
Trigger: CCTGACACCCGAGCTGGCTCAGGTGAACGAGTACTG...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCCTCTGTGATCCTTCATaGGACACAGTATTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQILCDPS*DTVFLF
Trigger: GAACAGAAATACTGTGTCTCATGAAGGATCACAGAG...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGCAGCGGCTGATCCAGTaGAGGCGTTTGTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALQRLIQ*RRLCVC
Trigger: GCACACGCACAAACGCCTTCACTGGATCAGCCGCTG...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCCAGCAATTCGGGAGATaGCATTCTTCAACTGCATTT +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIQQFGR*HSSTAF
Trigger: AAATGCAGTTGAAGAATGTCATCTCCCGAATTGCTG...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATGGTGGGCGGATTGCTTaGGTCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHGGRIA*VQEFET
Trigger: GGTCTCGAACTCCTGGACTCAAGCAATCCGCCCACC...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCCATCAGACACAGACATaGCCGCAAAGGTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSHQTQT*PQRYQS
Trigger: ACTTTGATACCTTTGCGGTCATGTCTGTGTCTGATG...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCATGACATTTCCCATATaGTATTCGAGGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSMTFPI*YSRPGG
Trigger: TCCACCAGGCCTCGAATATCATATGGGAAATGTCAT...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGTGGGAAGCAGGTGTCTaGACAGGACTGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALWEAGV*TGLGGA
Trigger: AGCACCTCCCAGTCCTGTTCAGACACCTGCTTCCCA...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGGGTTTGCCTCTGCTCTaGAGGCCAAGAGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALGLPLL*RPRGSK
Trigger: CTTGGAGCCTCTTGGCCTTCAGAGCAGAGGCAAACC...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAAGATGGAGGCTGCAGTaGGCTGTGATCGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSRWRLQ*AVIVPP
Trigger: TGGTGGCACGATCACAGCTCACTGCAGCCTCCATCT...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATGGCCTGGTGGACACATaGCTGACAGTGCACATCCAG +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHGLVDT*LTVHIQ
Trigger: CTGGATGTGCACTGTCAGTCATGTGTCCACCAGGCC...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGAACAGGACTGGGAGGTaGTCGTGGCGGTTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKNRTGR*SWRFRK
Trigger: CTTCCGGAACCGCCACGAGCACCTCCCAGTCCTGTT...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCCTTATCCAATTTGGTTaGAAAATGCCTCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSLIQFG*KMPRHL
Trigger: CAGATGCCGAGGCATTTTGCAACCAAATTGGATAAG...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAGGCAGGAAGCAGCCTaGTCTAACAGCAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQRQEAA*SNSSLP
Trigger: CGGGAGGCTGCTGTTAGAGCAGGCTGCTTCCTGCCT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGTGGGGGTGTGAGCAGTaGACCTGGGCTCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQWGCEQ*TWALAV
Trigger: GACAGCAAGAGCCCAGGTGCACTGCTCACACCCCCA...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGACTGGGAGGTGCTCGTaGCGGTTCCGGAAGGGGATA +
Preference number: 4 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKTGRCS*RFRKGI
Trigger: TATCCCCTTCCGGAACCGCCACGAGCACCTCCCAGT...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGTGCAAGCGCTGGCGCTaGAGCATGGGAAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQCKRWR*SMGSRC
Trigger: ACACCTGCTTCCCATGCTCCAGCGCCAGCGCTTGCA...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGGCAAACTGCAAGCGCTaGCGCTGGAGCATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQANCKR*RWSMGS
Trigger: GCTTCCCATGCTCCAGCGCCAGCGCTTGCAGTTTGC...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCTGGGCTCTTGCTGTCTaGAGCTTTGTTAGTCTAATT +
Preference number: 4 (lower is better)
Translates to: SEPRRACFRQEAACSNSSWALAV*SFVSLI
Trigger: AATTAGACTAACAAAGCTCCAGACAGCAAGAGCCCA...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAAGTAGTTCAGGTTGTTaGGGCCATCCAGCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSSSSGC*GHPALA
Trigger: GGCAAGGGCTGGATGGCCTCAACAACCTGAACTACT...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCATCTTTAGATTTCAGTaGAAAAATGTACCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIIFRFQ*KNVPLA
Trigger: TGCCAGGGGTACATTTTTGCACTGAAATCTAAAGAT...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAGGTCGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCCCGCTTAGCGGAGAGTaGGATGAGCACATGCGCGGC +
Preference number: 4 (lower is better)
Translates to: KGRVILFFCDMPYIHSLAPLSGE*DEHMRG
Trigger: GCCGCGCATGTGCTCATCCCACTCTCCGCTAAGCGG...GGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCACATCCATAATAGTTaGGATCACTTTCCGGTATGT +
Preference number: 4 (lower is better)
Translates to: RARDVCAASPEGPALGRKHIHNS*DHFPVC
Trigger: ACATACCGGAAAGTGATCGCAACTATTATGGATGTG...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGAGGCGTTTGTGCGTGTaGTGTCACATTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALRRLCV*CHIFPL
Trigger: CAGGGGGAAAATGTGACAGCACACGCACAAACGCCT...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCATGACATTCTTCAACTaGATTTTAACTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIMTFFN*ILTEFL
Trigger: CAGGAACTCAGTTAAAATGCAGTTGAAGAATGTCAT...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGAGTGGGATGAGCACATaGGCGGCCGACAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVSGMST*AADREE
Trigger: CTCTTCCCTGTCGGCCGCGCATGTGCTCATCCCACT...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATCAAGGCTGGGCGCAATaGCTCACACCCGCCCATAAT +
Preference number: 4 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDQGWAQ*LTPAHN
Trigger: ATTATGGGCGGGTGTGAGCCATTGCGCCCAGCCTTG...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGTCCTGGCTCCCTATTTaGGTGCTCCTTGGTTCTATG +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALSWLPI*VLLGSM
Trigger: CATAGAACCAAGGAGCACTCAAATAGGGAGCCAGGA...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAGGTCGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAACGCAGCTGCCCTGTaGTGGGTTTGCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KGRVILFFCDMPYIHSLANAAAL*WVCLCS
Trigger: AGAGCAGAGGCAAACCCACCACAGGGCAGCTGCGTT...GGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AAAGGTCGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCACAGAAAGCCAGTGCTaGCGAAGGAAGTCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KGRVILFFCDMPYIHSLATESQC*RRKSPS
Trigger: GCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGT...GGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATCAGACGTCTGTCTTGTaGAAACAGAAAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHQTSVL*KQKASA
Trigger: AGCACTGGCTTTCTGTTTTCACAAGACAGACGTCTG...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAAAATCTCATCGGACTaGTTTCTTGGTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQKISSD*FLGGGG
Trigger: CCCACCGCCACCAAGAAAGCAGTCCGATGAGATTTT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGTCCGAGCTTGATGGTTaGGTCTTTGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALSELDG*VFGEEF
Trigger: GAACTCTTCTCCAAAGACCCAACCATCAAGCTCGGA...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGGTTCATCATGGGTTCTaGAGACTGCGGCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQVHHGF*RLRLRQ
Trigger: CTGTCTTAGCCGCAGTCTCCAGAACCCATGATGAAC...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGACAGAACACGAAGCCTaGAGAGCCAGAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQTEHEA*RARDVC
Trigger: ACACACATCTCTGGCTCTCCAGGCTTCGTGTTCTGT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCACACTCCCACAGTTTGTaGGGATCATATGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSHSHSL*GSYVHR
Trigger: TCTGTGGACATATGATCCCCACAAACTGTGGGAGTG...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGTCAGAAGGCTTCCAGTaGCCTCCGAGCTTGATGGTT +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVSEGFQ*PPSLMV
Trigger: AACCATCAAGCTCGGAGGTCACTGGAAGCCTTCTGA...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAACAGAGACTACAATTTaGGGGCTTTGGTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSTETTI*GLWFGE
Trigger: TTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGT...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATTGCCATCGTCAATGGTaGGTGGATACAATCAATCCA +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHCHRQW*VDTINP
Trigger: TGGATTGATTGTATCCACTCACCATTGACGATGGCA...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGCCTTCCACCGAGGCATaGAATCAGAAGGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVPSTEA*NQKASS
Trigger: ACTGGAAGCCTTCTGATTGCATGCCTCGGTGGAAGG...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CCCTGCACACAGCAATCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTTGGCTCACAGAATAGCCTaGATTCTGTACTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PCTQQSKTRLRGHPSVALAHRIA*ILYSVP
Trigger: TGGAACAGAGTACAGAATGCAGGCTATTCTGTGAGC...CAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGATTGCTGTGTGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGTCAAGGTGGGCGGATTaGTTGAGTCCAGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVSRWAD*LSPGVR
Trigger: TCGAACTCCTGGACTCAAGCAATCCGCCCACCTTGA...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGCTATTGGGCCCTTCATaGAAGGGAGTCTTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVLLGPS*KGVFQG
Trigger: GCCCTGAAAGACTCCCTTCCATGAAGGGCCCAATAG...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATCTTTCTTGGTGGCGGTaGGTAAAGCAAACGTACATT +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHLSWWR*VKQTYI
Trigger: AATGTACGTTTGCTTTACCCACCGCCACCAAGAAAG...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGGGACTGCTTTCTTGGTaGCGGTGGGTAAAGCAAACG +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVGLLSW*RWVKQT
Trigger: CGTTTGCTTTACCCACCGCCACCAAGAAAGCAGTCC...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATATCGGACTGCTTTCTTaGTGGCGGTGGGTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDIGLLS*WRWVKQ
Trigger: TTGCTTTACCCACCGCCACCAAGAAAGCAGTCCGAT...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp CAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTaGTGGGGATCATATGTCCACAGAACCATCACATGC +
Preference number: 4 (lower is better)
Translates to: QTKQGLANHSHS*WGSYVHRTITC
Trigger: GCATGTGATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTTCAAACAAGATCGCCTaGCAACACTGCCGCATACAC +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVSNKIA*QHCRIH
Trigger: GTGTATGCGGCAGTGTTGTCAGGCGATCTTGTTTGA...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGTGGTGGACACATGACTaGCAGTGCACATCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVWWTHD*QCTSRD
Trigger: ATCTCTGGATGTGCACTGTCAGTCATGTGTCCACCA...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATCATTTTCCAGAATTCTaGAGAAGCCGACAGAGACTA +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHHFPEF*RSRQRL
Trigger: TAGTCTCTGTCGGCTTCTGCAGAATTCTGGAAAATG...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTCACTGCTGTTCCTCTTaGCATAAGCACTCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVHCCSS*HKHSEA
Trigger: TGCTTCGGAGTGCTTATGCCAAGAGGAACAGCAGTG...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGCATGTTTATGTCTATTaGGCCCTTCATGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQHVYVY*ALHGRE
Trigger: CTCCCTTCCATGAAGGGCCCAATAGACATAAACATG...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTCTTGGGCTTGCATCATaGAGAGGTAGGTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVLGLAS*RGRCSL
Trigger: TAGTGAACACCTACCTCTTCATGATGCAAGCCCAAG...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCATACAATTTAGAACATaGCTTCAAGGCTGGGCGCAA +
Preference number: 4 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPIQFRT*LQGWAQ
Trigger: TTGCGCCCAGCCTTGAAGTCATGTTCTAAATTGTAT...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AAAGGTCGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCACCTGCTCTCTCATATaGGCCGATAAGAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KGRVILFFCDMPYIHSLATCSLI*ADKSFA
Trigger: TGCAAAGCTCTTATCGGCTCATATGAGAGAGCAGGT...GGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGATAGTGTTGTCACATTaGAAGCAACTCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQIVLSH*KQLTAF
Trigger: GAAGGCTGTGAGTTGCTTTCAATGTGACAACACTAT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGAATCCATGTGGCTCCTaGTCAGCTATTAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKNPCGS*SAINVC
Trigger: ACAGACATTAATAGCTGAGCAGGAGCCACATGGATT...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCATCTAGAAGAATGGTGTaGAGTTTCATTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSSRRMV*SFICSS
Trigger: GGAAGAGCAAATGAAACTCCACACCATTCTTCTAGA...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp CAGAAGCCAGCTCCCAGCAATAAAGGTCGGGTTATTTaGTTCTTTTGTGACATGCCCTATATCCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: QKPAPSNKGRVI*FFCDMPYIHSL
Trigger: GAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTTATTGCTGGGAGCTGGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATGAAAATCAAGGAAGTTaGAGGCAAACAAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHENQGS*RQTRQL
Trigger: TAATTGCCTTGTTTGCCTTCAACTTCCTTGATTTTC...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGAGGGCAGGTATGGTTTaGAAAGTAGGTGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVRAGMV*KVGEVF
Trigger: GAAGACTTCACCTACTTTGCAAACCATACCTGCCCT...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGTCGTATGTGATGTTTaGAAAGTAGTTCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSVVCDV*KVVQVV
Trigger: AACAACCTGAACTACTTTGCAAACATCACATACGAC...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGTGTTCTTTTGTGACATaGCCTATATCCACTCCCTCG +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVCSFVT*PISTPS
Trigger: CGAGGGAGTGGATATAGGGCATGTCACAAAAGAACA...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCATCAGCTACCAATATATaGACAAGGTCACATTTGGTT +
Preference number: 4 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSSATNI*TRSHLV
Trigger: AACCAAATGTGACCTTGTGCATATATTGGTAGCTGA...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTGCTCGATTAAAGGGTTaGGTACCAACTTGTTCAACC +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVARLKG*VPTCST
Trigger: GGTTGAACAAGTTGGTACCCAACCCTTTAATCGAGC...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGTTGAGGGCTTTGGTTTaGGGAAAAACAAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVLRALV*GKTKRH
Trigger: GTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAA...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGAACAGCACACGGGCCTaGCTGTACGTTTTTAACTAT +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVNSTRA*LYVFNY
Trigger: ATAGTTAAAAACGTACAGCCAGGCCCGTGTGCTGTT...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCATCGTCAATGGTGAGTaGATACAATCAATCCATGTG +
Preference number: 4 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPIVNGE*IQSIHV
Trigger: CACATGGATTGATTGTATCCACTCACCATTGACGAT...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp GAGGAATCACTGAAGCCAGCTGGTAATGTAGGCACATaGTTCAGAAACTGTGGCCAAGTTCCACAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: EESLKPAGNVGT*FRNCGQVPQEK
Trigger: TTTCTCTTGTGGAACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGATTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp TTCCAGAATTCTGCAGAAGCCGACAGAGACTACAATTaGAGGGCTTTGGTTTGGGGAAAAACAAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FQNSAEADRDYN*RALVWGKTKRH
Trigger: GTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTCGGCTTCTGCAGAATTCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGACAAGGCGTCGTATGTaGTGTTTGCAAAGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVTRRRM*CLQSSS
Trigger: TGAACTACTTTGCAAACATCACATACGACGCCTTGT...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTCTGAGTCATTTACACTaGTGTTCCTCTTGGCATAAG +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVLSHLH*CSSWHK
Trigger: CTTATGCCAAGAGGAACAGCAGTGTAAATGACTCAG...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATAGAAATGTTGTAGTTTaGAGGAAGGTTTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDRNVVV*RKVSLW
Trigger: CCACAGTGAAACCTTCCTGCAAACTACAACATTTCT...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCAAAGTGAGAATCAGTCTGTCCTaGCAAATCCTTCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: RVILFFCDMPYIHSLAKVRISLS*QILPND
Trigger: GTCATTTGGAAGGATTTGCCAGGACAGACTGATTCT...CACTTTGGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AAAGGTCGGGTTATTTTGTTCTTTTGTGACATGCCCTATATCCACTCCCTCGCCGTCAAGAGGATAATCTaGGTCATTTACACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KGRVILFFCDMPYIHSLAVKRII*VIYTAV
Trigger: AACAGCAGTGTAAATGACTCAGATTATCCTCTTGAC...GGCGAGGGAGTGGATATAGGGCATGTCACAAAAGAACAAAATAACCCGACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTATCCAAGTCTTTCATTaGCTCTTGAAAGCCAACGTT +
Preference number: 4 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVIQVFH*LLKANV
Trigger: AACGTTGGCTTTCAAGAGGCAATGAAAGACTTGGAT...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATTATACTTATCCAATTTaGTTGCAAAATGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDYTYPI*LQNASA
Trigger: TGCCGAGGCATTTTGCAACCAAATTGGATAAGTATA...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGTATTTGAGTGCTCCTTaGTTCTATGTATCAGTTACT +
Preference number: 4 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQYLSAP*FYVSVT
Trigger: AGTAACTGATACATAGAACCAAGGAGCACTCAAATA...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp TCTGCAGAAGCCGACAGAGACTACAATTTGAGGGCTTaGGTTTGGGGAAAAACAAAGAGGCACAAATTCAAA +
Preference number: 4 (lower is better)
Translates to: SAEADRDYNLRA*VWGKTKRHKFK
Trigger: TTTGAATTTGTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTCGGCTTCTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp TCAAAGACAAGATTAAGGGGCCACCCATCAGTAGCCTaGAAGATTTTCAGCTACCAATATATGCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKTRLRGHPSVA*KIFSYQYMHKV
Trigger: GACCTTGTGCATATATTGGTAGCTGAAAATCTTCAAGGCTACTGATGGGTGGCCCCTTAATCTTGTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTCAACTGCATTTTAACTaGGTTCCTGCACTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFQLHFN*VPALAN
Trigger: GTTGGCAAGTGCAGGAACTCAGTTAAAATGCAGTTG...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CCA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGAGAGATCTAGAAGAATaGTGTGGAGTTTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVRDLEE*CGVSFA
Trigger: AGCAAATGAAACTCCACACCATTCTTCTAGATCTCT...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR TCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTGCTCGGGTGTCAGGTTaGCAGTTATGTTTTTATACA +
Preference number: 4 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFARVSG*QLCFYT
Trigger: TGTATAAAAACATAACTGTCAACCTGACACCCGAGC...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR GCA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTAATTTGGTTGCAAAATaGCTCGGCATCTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFNLVAK*LGICPH
Trigger: ATGTGGACAGATGCCGAGGCATTTTGCAACCAAATT...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
3UTR CAA 72 bp AGAAGCCGACAGAGACTACAATTTGAGGGCTTTGGTTaGGGGAAAAACAAAGAGGCACAAATTCAAATACAA +
Preference number: 4 (lower is better)
Translates to: RSRQRLQFEGFG*GKNKEAQIQIQ
Trigger: TTGTATTTGAATTTGTGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTCGGCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCCATCGGACTGCTTTCTaGGTGGCGGTGGGTAAAGCA +
Preference number: 5 (lower is better)
Translates to: SEPRRACFRQEAACSNSSHRTAF*VAVGKA
Trigger: TGCTTTACCCACCGCCACCAAGAAAGCAGTCCGATG...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCAGCCTGCTCTAACAGCAGCCTCCTGGCTCCCTATTaGAGTGCTCCTTGGTTCTAT +
Preference number: 5 (lower is better)
Translates to: SEPRRACFRQEAACSNSSLLAPY*SAPWFY
Trigger: ATAGAACCAAGGAGCACTCAAATAGGGAGCCAGGAG...GCTGCTGTTAGAGCAGGCTGCTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCGGGTTGGGTACCAACTaGTTCAACCACATAAAATGC +
Preference number: 5 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIGLGTN*FNHIKC
Trigger: GCATTTTATGTGGTTGAACAAGTTGGTACCCAACCC...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGGGTGTGGAGTTTCATTaGCTCTTCCTAAAACGCAGC +
Preference number: 5 (lower is better)
Translates to: RARDVCAASPEGPALGRKGVEFH*LFLKRS
Trigger: GCTGCGTTTTAGGAAGAGCAAATGAAACTCCACACC...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp GTCATGTGTAGGGACAGGCTCCACGGCAGGACCACGGCAGGACCACGGCAGATCATATACTTATCCAATTaGGTTGCAAAATGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: VMCRDRLHGRTTAGPRQIIYLSN*VAKCLG
Trigger: GCCGAGGCATTTTGCAACCAAATTGGATAAGTATAT...GATCTGCCGTGGTCCTGCCGTGGTCCTGCCGTGGAGCCTGTCCCTACACATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGAGCCAGAGATGTGTGTGCAGCGAGCCCCGAAGGGCCTGCTTTAGGCAGGAAGCACCCATCAGTAGCCTaGAAGATTTTCAGCTACCAA +
Preference number: 5 (lower is better)
Translates to: RARDVCAASPEGPALGRKHPSVA*KIFSYQ
Trigger: TTGGTAGCTGAAAATCTTCAAGGCTACTGATGGGTG...CTTCCTGCCTAAAGCAGGCCCTTCGGGGCTCGCTGCACACACATCTCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAAGTGCACCTGGGCTCTaGCTGTCTGGAGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSSAPGL*LSGALL
Trigger: TAACAAAGCTCCAGACAGCAAGAGCCCAGGTGCACT...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCCGATTGTTCTCACGTaGTCCCGGATCAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKPIVLT*SRIRMP
Trigger: AGGCATTCTGATCCGGGACAACGTGAGAACAATCGG...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAAACCTGAGCACCGATaGTTCTCACGTTGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQKPEHR*FSRCPG
Trigger: TCCGGGACAACGTGAGAACAATCGGTGCTCAGGTTT...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATAGTATTTCTGTTCTCTaGCTGTGTAGACCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHSISVL*LCRPSP
Trigger: GGGGGAGGGTCTACACAGCAAGAGAACAGAAATACT...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCAGAATGCCTTGGGCTaGCATCATGAAGAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKQNALG*HHEEVG
Trigger: ACCTACCTCTTCATGATGCAAGCCCAAGGCATTCTG...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATAATCACTCCCACAGTTaGTGGGGATCATATGTCCAC +
Preference number: 5 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHNHSHS*WGSYVH
Trigger: GTGGACATATGATCCCCACAAACTGTGGGAGTGATT...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGAACCATTCATGTTTATGTCTATaGGGCCCTTCATGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: RPGQSLPQFVGIICPQNHSCLCL*GPSWKG
Trigger: TCCCTTCCATGAAGGGCCCAATAGACATAAACATGA...ATGGTTCTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCGGCTCGATTAAAGGGTaGGGTACCAACTTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPGSIKG*GTNLFN
Trigger: GTTGAACAAGTTGGTACCCAACCCTTTAATCGAGCC...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCAGTCTTTCATTGCCTCTaGAAAGCCAACGTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSVFHCL*KANVEK
Trigger: CTTTTCAACGTTGGCTTTCAAGAGGCAATGAAAGAC...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTAGGTGGGCGGATTGCTaGAGTCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFRWADC*SPGVRD
Trigger: GTCTCGAACTCCTGGACTCAAGCAATCCGCCCACCT...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AGACGTCTGTCTTGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGTTTGAGGGCTTTGGTTaGGGGAAAAACAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RRLSCENRKPVLTKEVPKFEGFG*GKNKEA
Trigger: TGCCTCTTTGTTTTTCCCCAAACCAAAGCCCTCAAA...CTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACAAGACAGACGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCAATCCAAGTCTTTCATaGCCTCTTGAAAGCCAACGT +
Preference number: 5 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPNPSLS*PLESQR
Trigger: ACGTTGGCTTTCAAGAGGCAATGAAAGACTTGGATT...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TGTGAAAACAGAAAGCCAGTGCTGACGAAGGAAGTCCCCAAGCTCACTCCCTCACTATTTGAGTGCTCCTaGGTTCTATGTATCAGTTAC +
Preference number: 5 (lower is better)
Translates to: CENRKPVLTKEVPKLTPSLFECS*VLCISY
Trigger: GTAACTGATACATAGAACCAAGGAGCACTCAAATAG...TGAGGGAGTGAGCTTGGGGACTTCCTTCGTCAGCACTGGCTTTCTGTTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTGACAGAGACTACAATTaGAGGGCTTTGGTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVDRDYN*RALVWG
Trigger: TCCCCAAACCAAAGCCCTCAAATTGTAGTCTCTGTC...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AAAACAAGGCCTGGCCAATCACTCCCACAGTTTGTGGGGATCATATGTCCACAGGCCAACAGTGTGTACTaGATGGTAATTATGGCAACA +
Preference number: 5 (lower is better)
Translates to: KTRPGQSLPQFVGIICPQANSVY*MVIMAT
Trigger: TGTTGCCATAATTACCATCAAGTACACACTGTTGGC...CTGTGGACATATGATCCCCACAAACTGTGGGAGTGATTGGCCAGGCCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS TCA 90 bp TGGGTAAAGCAAACGTACATTCTCTCCTCTCAGTACTCGTTCACCTaGGCCAGCTCGGGTGTCAGGTTGACAGTTATGTTTTTATACAAG +
Preference number: 5 (lower is better)
Translates to: WVKQTYILSSQYSFT*ASSGVRLTVMFLYK
Trigger: CTTGTATAAAAACATAACTGTCAACCTGACACCCGAGCTGGCTCAGGTGAACGAGTACTGAGAGGAGAGAATGTACGTTTGCTTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 90 bp TATTGGGCCCTTCATGGAAGGGAGTCTTTCAGGGCAGGTATGGTTTaGAAAGTAGGTGAAGTCTTCAGGAAGAAATGTTGTAGTTTGCAG +
Preference number: 5 (lower is better)
Translates to: YWALHGRESFRAGMV*KVGEVFRKKCCSLQ
Trigger: CTGCAAACTACAACATTTCTTCCTGAAGACTTCACCTACTTTGCAAACCATACCTGCCCTGAAAGACTCCCTTCCATGAAGGGCCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 90 bp CAGGTTGACAGTTATGTTTTTATACAAGGCGTCGTATGTGATGTTTaGAAAGTAGTTCAGGTTGTTGAGGCCATCCAGCCCTTGCCGTTC +
Preference number: 5 (lower is better)
Translates to: QVDSYVFIQGVVCDV*KVVQVVEAIQPLPF
Trigger: GAACGGCAAGGGCTGGATGGCCTCAACAACCTGAACTACTTTGCAAACATCACATACGACGCCTTGTATAAAAACATAACTGTCAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp CAGCATGAACAAACGGGGACACCTTTCCCTGCACACAGCAATCAAAGACAAGATACTTATCCAATTTGGTaGCAAAATGCCTCGGCATCT +
Preference number: 5 (lower is better)
Translates to: QHEQTGTPFPAHSNQRQDTYPIW*QNASAS
Trigger: AGATGCCGAGGCATTTTGCAACCAAATTGGATAAGT...ATCTTGTCTTTGATTGCTGTGTGCAGGGAAAGGTGTCCCCGTTTGTTCATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTGCCCTTGCCGTTCTTTaGACTTCCTCAGCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFALAVL*TSSAEH
Trigger: ATGCTCTGCTGAGGAAGTCAAAAGAACGGCAAGGGC...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp GGTGAGTGGATACAATCAATCCATGTGGCTCCTGCTCAGCTATTAATGTCTGTGAAAGGTCGGGTTATTTaGTTCTTTTGTGACATGCCC +
Preference number: 5 (lower is better)
Translates to: GEWIQSIHVAPAQLLMSVKGRVI*FFCDMP
Trigger: GGGCATGTCACAAAAGAACAAAATAACCCGACCTTT...CACAGACATTAATAGCTGAGCAGGAGCCACATGGATTGATTGTATCCACTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp CAGAAACTGTGGCCAAGTTCCACAAGAGAAAAAGTAAGAGGGGGAGGGATTCCCGAGCCGATAAGAGCTTaGCAATGCAATTTATTTTCT +
Preference number: 5 (lower is better)
Translates to: QKLWPSSTREKVRGGGIPEPIRA*QCNLFS
Trigger: AGAAAATAAATTGCATTGCAAAGCTCTTATCGGCTC...GGGAATCCCTCCCCCTCTTACTTTTTCTCTTGTGGAACTTGGCCACAGTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTAAGAAATGTTGTAGTTaGCAGGAAGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVKKCCS*QEGFTV
Trigger: CACAGTGAAACCTTCCTGCAAACTACAACATTTCTT...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp TCACTGAAGCCAGCTGGTAATGTAGGCACATTGTTCAGAAACTGTGGCCAAGTTTACAATTTGAGGGCTTaGGTTTGGGGAAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: SLKPAGNVGTLFRNCGQVYNLRA*VWGKTK
Trigger: CTTTGTTTTTCCCCAAACCAAAGCCCTCAAATTGTA...AACTTGGCCACAGTTTCTGAACAATGTGCCTACATTACCAGCTGGCTTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS-3UTR CAA 90 bp AACACAAACAAACAAACAAACAAAACAAGGCCTGGCCAATCACTCCCACAGTTTAGCTCGGGTGTCAGGTaGACAGTTATGTTTTTATAC +
Preference number: 5 (lower is better)
Translates to: NTNKQTNKTRPGQSLPQFSSGVR*TVMFLY
Trigger: GTATAAAAACATAACTGTCAACCTGACACCCGAGCT...AAACTGTGGGAGTGATTGGCCAGGCCTTGTTTTGTTTGTTTGTTTGTTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 72 bp AGCATGGGAAGCAGGTGTCTGAACAGGACTGGGAGGTaGTCGTGGCGGTTCCGGAAGGGGATAAGGATCGCC +
Preference number: 6 (lower is better)
Translates to: SMGSRCLNRTGR*SWRFRKGIRIA
Trigger: GGCGATCCTTATCCCCTTCCGGAACCGCCACGAGCACCTCCCAGTCCTGTTCAGACACCTGCTTCCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CCA 72 bp GGAAGCAGGTGTCTGAACAGGACTGGGAGGTGCTCGTaGCGGTTCCGGAAGGGGATAAGGATCGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: GSRCLNRTGRCS*RFRKGIRIATF
Trigger: GAAGGTGGCGATCCTTATCCCCTTCCGGAACCGCCACGAGCACCTCCCAGTCCTGTTCAGACACCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 90 bp AACCTGAGCACCGATTGTTCTCACGTTGTCCCGGATCAGAATGCCTaGGGCTTGCATCATGAAGAGGTAGGTGTTCACTATGCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: NLSTDCSHVVPDQNA*GLHHEEVGVHYAGR
Trigger: GCGCCCGGCATAGTGAACACCTACCTCTTCATGATGCAAGCCCAAGGCATTCTGATCCGGGACAACGTGAGAACAATCGGTGCTCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS TCA 72 bp ACCTTCCACCGAGGCATGCAATCAGAAGGCTTCCAGTaGCCTCCGAGCTTGATGGTTGGGTCTTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: TFHRGMQSEGFQ*PPSLMVGSLEK
Trigger: CTTCTCCAAAGACCCAACCATCAAGCTCGGAGGTCACTGGAAGCCTTCTGATTGCATGCCTCGGTGGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 72 bp CACTCCGAAGCACCTGCTCATAAACCTGAGCACCGATaGTTCTCACGTTGTCCCGGATCAGAATGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: HSEAPAHKPEHR*FSRCPGSECLG
Trigger: CCCAAGGCATTCTGATCCGGGACAACGTGAGAACAATCGGTGCTCAGGTTTATGAGCAGGTGCTTCGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 90 bp AGCACCGATTGTTCTCACGTTGTCCCGGATCAGAATGCCTTGGGCTaGCATCATGAAGAGGTAGGTGTTCACTATGCCGGGCGCCACATA +
Preference number: 6 (lower is better)
Translates to: STDCSHVVPDQNALG*HHEEVGVHYAGRHI
Trigger: TATGTGGCGCCCGGCATAGTGAACACCTACCTCTTCATGATGCAAGCCCAAGGCATTCTGATCCGGGACAACGTGAGAACAATCGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 72 bp TGTTCTCACGTTGTCCCGGATCAGAATGCCTTGGGCTaGCATCATGAAGAGGTAGGTGTTCACTATGCCGGG +
Preference number: 6 (lower is better)
Translates to: CSHVVPDQNALG*HHEEVGVHYAG
Trigger: CCCGGCATAGTGAACACCTACCTCTTCATGATGCAAGCCCAAGGCATTCTGATCCGGGACAACGTGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 90 bp TGGCATAAGCACTCCGAAGCACCTGCTCATAAACCTGAGCACCGATaGTTCTCACGTTGTCCCGGATCAGAATGCCTTGGGCTTGCATCA +
Preference number: 6 (lower is better)
Translates to: WHKHSEAPAHKPEHR*FSRCPGSECLGLAS
Trigger: TGATGCAAGCCCAAGGCATTCTGATCCGGGACAACGTGAGAACAATCGGTGCTCAGGTTTATGAGCAGGTGCTTCGGAGTGCTTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS TCA 72 bp CAGGTTGTTGAGGCCATCCAGCCCTTGCCGTTCTTTTaGCTTCCTCAGCAGAGCATACCTTCCAAGAAACTG +
Preference number: 6 (lower is better)
Translates to: QVVEAIQPLPFF*LPQQSIPSKKL
Trigger: CAGTTTCTTGGAAGGTATGCTCTGCTGAGGAAGTCAAAAGAACGGCAAGGGCTGGATGGCCTCAACAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS TCA 72 bp CAAACGTACATTCTCTCCTCTCAGTACTCGTTCACCTaGGCCAGCTCGGGTGTCAGGTTGACAGTTATGTTT +
Preference number: 6 (lower is better)
Translates to: QTYILSSQYSFT*ASSGVRLTVMF
Trigger: AAACATAACTGTCAACCTGACACCCGAGCTGGCTCAGGTGAACGAGTACTGAGAGGAGAGAATGTACGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 72 bp GGTTCAAGTCAAGAGGATAATCTGAGTCATTTACACTaGTGTTCCTCTTGGCATAAGCACTCCGAAGCACCT +
Preference number: 6 (lower is better)
Translates to: GSSQEDNLSHLH*CSSWHKHSEAP
Trigger: AGGTGCTTCGGAGTGCTTATGCCAAGAGGAACAGCAGTGTAAATGACTCAGATTATCCTCTTGACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 72 bp CTTCATGGAAGGGAGTCTTTCAGGGCAGGTATGGTTTaGAAAGTAGGTGAAGTCTTCAGGAAGAAATGTTGT +
Preference number: 6 (lower is better)
Translates to: LHGRESFRAGMV*KVGEVFRKKCC
Trigger: ACAACATTTCTTCCTGAAGACTTCACCTACTTTGCAAACCATACCTGCCCTGAAAGACTCCCTTCCATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS GCA 72 bp AGTTATGTTTTTATACAAGGCGTCGTATGTGATGTTTaGAAAGTAGTTCAGGTTGTTGAGGCCATCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SYVFIQGVVCDV*KVVQVVEAIQP
Trigger: GGGCTGGATGGCCTCAACAACCTGAACTACTTTGCAAACATCACATACGACGCCTTGTATAAAAACATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 72 bp AAAGTAGGTGAAGTCTTCAGGAAGAAATGTTGTAGTTaGCAGGAAGGTTTCACTGTGGTTCAAGTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: KVGEVFRKKCCS*QEGFTVVQVKR
Trigger: CCTCTTGACTTGAACCACAGTGAAACCTTCCTGCAAACTACAACATTTCTTCCTGAAGACTTCACCTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371711.4
CDS CAA 90 bp AGAACTCGGTATAAGGAAGCAGATACATATACTTATCCAATTTGGTaGCAAAATGCCTCGGCATCTGTCCACATCCATAATAGTTGCGAT +
Preference number: 6 (lower is better)
Translates to: RTRYKEADTYTYPIW*QNASASVHIHNSCD
Trigger: ATCGCAACTATTATGGATGTGGACAGATGCCGAGGCATTTTGCAACCAAATTGGATAAGTATATGTATCTGCTTCCTTATACCGAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371711.4