RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B4GALT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000121578

Ensembl transcript IDs: ENST00000359213.7, ENST00000393765.7, ENST00000459778.5, ENST00000459820.5, ENST00000460321.5, ENST00000460395.5, ENST00000467604.5, ENST00000470111.5, ENST00000471675.1, ENST00000472471.5, ENST00000473887.5, ENST00000475803.5, ENST00000479150.5, ENST00000479308.1, ENST00000480814.5, ENST00000483209.5, ENST00000484595.5, ENST00000487579.5, ENST00000491906.5, ENST00000493932.5

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACC +
Preference number: 1 (lower is better)
Translates to: GRHTWAGPPLKAISS*NQLSYCCLCSRHST
Trigger: GGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR TCA 90 bp CTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: LWWASLEGIPGQVLP*RLSAAATSSATAAF
Trigger: AAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR GCA 90 bp CCTCCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCCACCCTCCTGCTACCTCTTCATTCC +
Preference number: 1 (lower is better)
Translates to: PPLKAISSCNQLSYC*LCSRHSTLLLPLHS
Trigger: GGAATGAAGAGGTAGCAGGAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR GCA 90 bp GGTCCTCCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACACTCCACCCTCCTGCTACCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: GPPLKAISSCNQLSY*CLCSRHSTLLLPLH
Trigger: ATGAAGAGGTAGCAGGAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CCA 90 bp AGCTTCATCCGTTCTGCGTTCACCTCATTGCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAA +
Preference number: 1 (lower is better)
Translates to: SFIRSAFTSLPLSLV*KTIVYLPTSGRGRE
Trigger: TTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR GCA 90 bp GTGAAGGAAAAAGCACTCCAGGCAGAGAGACCACCCTGGGCAAGATaGACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGT +
Preference number: 1 (lower is better)
Translates to: VKEKALQAERPPWAR*TDAKEQDAFKEVTS
Trigger: ACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATCTTGCCCAGGGTGGTCTCTCTGCCTGGAGTGCTTTTTCCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 90 bp TTCCTCGTTCCTCAGCTTGCAGGCGGCCTATTGTGGACTTCATCTTaGGATAGTGTGAGTCAATACTCCTTAATAAACTCCCCTTCATAT +
Preference number: 1 (lower is better)
Translates to: FLVPQLAGGLLWTSS*DSVSQYSLINSPSY
Trigger: ATATGAAGGGGAGTTTATTAAGGAGTATTGACTCACACTATCCCAAGATGAAGTCCACAATAGGCCGCCTGCAAGCTGAGGAACGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATaGAATCTGGGAAGACAAGTGGGCAGTGAACTGAATAGGTTCTAC +
Preference number: 1 (lower is better)
Translates to: KSRMHLKKSLVWPEP*NLGRQVGSELNRFY
Trigger: GTAGAACCTATTCAGTTCACTGCCCACTTGTCTTCCCAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 90 bp CAATCAAAGCCTCATAAGAACTGGCTTATCTGCCAGGATTCCTTGTaGATAGGCCAATTCCCAAGGCAGGAAAAGTACAAGAAGAGCCTA +
Preference number: 1 (lower is better)
Translates to: QSKPHKNWLICQDSL*IGQFPRQEKYKKSL
Trigger: TAGGCTCTTCTTGTACTTTTCCTGCCTTGGGAATTGGCCTATTCACAAGGAATCCTGGCAGATAAGCCAGTTCTTATGAGGCTTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 90 bp TTGATTGGATTGAAGGATGTGAAGTATTGTTCCTGGGTGTGTCTGTaGGGGTGTTGCCAAAGGAAATTAACATTTGAGTCAGTGGACTGG +
Preference number: 1 (lower is better)
Translates to: LIGLKDVKYCSWVCL*GCCQRKLTFESVDW
Trigger: CCAGTCCACTGACTCAAATGTTAATTTCCTTTGGCAACACCCTCACAGACACACCCAGGAACAATACTTCACATCCTTCAATCCAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 90 bp GCAAGGAATACAGATACTACAGGATATGTACCAACCATTGCTAACTaGTCCTTGGCTGAGCTTCAGGGGATCTCTGAATCTTCCTATGTT +
Preference number: 1 (lower is better)
Translates to: ARNTDTTGYVPTIAN*SLAELQGISESSYV
Trigger: AACATAGGAAGATTCAGAGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGGTACATATCCTGTAGTATCTGTATTCCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 90 bp GACTGGCAATATCGAAACTCACAGATCAATCCTAACATCACAAAATaGCACAACCAGACATTACATCCTCCTGTTGTGACACTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: DWQYRNSQINPNITK*HNQTLHPPVVTLEE
Trigger: TTCCTCCAGTGTCACAACAGGAGGATGTAATGTCTGGTTGTGTCATTTTGTGATGTTAGGATTGATCTGTGAGTTTCGATATTGCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 90 bp CAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTA +
Preference number: 1 (lower is better)
Translates to: QYCIFVPFYLGREQL*FSQTFSSLISCGLL
Trigger: TAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR TCA 90 bp TTCTCACCTGACACCACCACTTCACAGATGATTGTACAGGATAAATaGATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGA +
Preference number: 1 (lower is better)
Translates to: FSPDTTTSQMIVQDK*ITVLYLRTFLPWTR
Trigger: TCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTATTCATTTATCCTGTACAATCATCTGTGAAGTGGTGGTGTCAGGTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CCA 90 bp AGGTCATGCACTCAAAGTGGGGGTAGGAGATATCAGCAGTGTTCATaGCATCAAGAATCTTCATACTTTTCATACAATTTAGGAATACTC +
Preference number: 1 (lower is better)
Translates to: RSCTQSGGRRYQQCS*HQESSYFSYNLGIL
Trigger: GAGTATTCCTAAATTGTATGAAAAGTATGAAGATTCTTGATGCCATGAACACTGCTGATATCTCCTACCCCCACTTTGAGTGCATGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 90 bp ACATCCTCCTGTTGTGACACTGGAGGAAGTACACAACACCATAAATaGAAATTCTTGCCCAAAAATAAGATTCTGTTCAAGTCTCCAGAA +
Preference number: 1 (lower is better)
Translates to: TSSCCDTGGSTQHHK*KFLPKNKILFKSPE
Trigger: TTCTGGAGACTTGAACAGAATCTTATTTTTGGGCAAGAATTTTCATTTATGGTGTTGTGTACTTCCTCCAGTGTCACAACAGGAGGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 2 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR TCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 2 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCGAGCTTCATCCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 2 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLELHPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTC...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR-3UTR GCA 90 bp ACCCTGAACATCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 2 (lower is better)
Translates to: TLNIRLQVLQLLDSWTYTSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...GGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGATGTTCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 2 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR TCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCCCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 2 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 2 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCCAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 2 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR GCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR TCA 90 bp ACCCTGAACATCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAAAGAAGAGAGGCCATaGGTTGAGAACTGTAGACGT +
Preference number: 2 (lower is better)
Translates to: TLNIRLQVLQLLDSWTYTKEERP*VENCRR
Trigger: ACGTCTACAGTTCTCAACTCATGGCCTCTCTTCTTT...GGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGATGTTCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR GCA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAAAGCATGGTGACACATaGCTGTGGTCCCAGCTACTT +
Preference number: 2 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPKHGDT*LWSQLL
Trigger: AAGTAGCTGGGACCACAGGCATGTGTCACCATGCTT...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 2 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR TCA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATGGAATCTGAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: KSRMHLKKSLVWPEPWNLKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR GCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 2 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp AACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCAGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 2 (lower is better)
Translates to: NYSTHLFSRLVTLGVRASGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...TGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
3UTR-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGT +
Preference number: 2 (lower is better)
Translates to: REQLWFSQTFSSLISCGLQTRDT*CKSFIR
Trigger: ACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR CAA 90 bp ACTTGGTGTAAGAGCTTCATCCGTTCTGCGTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACCATTGTATATTTACCCACTTCAGGC +
Preference number: 2 (lower is better)
Translates to: TWCKSFIRSAFTSLP*SLVWKTIVYLPTSG
Trigger: GCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTCTTACACCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 2 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCACGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR CAA 90 bp AAGGATGTGCAAGGAATACAGATACTACAGGATATGTACCAACCATaGCTAACTGATCCTTGGCTGAGCTTCAGGGGATCTCTGAATCTT +
Preference number: 2 (lower is better)
Translates to: KDVQGIQILQDMYQP*LTDPWLSFRGSLNL
Trigger: AAGATTCAGAGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGGTACATATCCTGTAGTATCTGTATTCCTTGCACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 2 (lower is better)
Translates to: SQTFSSLISCGLLSHNILGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR GCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 2 (lower is better)
Translates to: SQTFSSLISCGLLSHNILNQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR GCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGACGTGAGGGTTCAGTaGACCACTTTCTCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIDVRVQ*TTFSPF
Trigger: AAAAGGAGAGAAAGTGGTGCACTGAACCCTCACGTC...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 2 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 2 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CCA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAATGCATAGATTAGACTaGCAATATCGAAACTCACAG +
Preference number: 2 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPMHRLD*QYRNSQ
Trigger: CTGTGAGTTTCGATATTGCCAGTCTAATCTATGCAT...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 90 bp TTGTACCTGTTGTGTTTCCTACCATTACAAAGTTTGTTTGCCCCATaGAAGGTGACAGACATGATAGCCATGTATTCATGTGTCAGACTC +
Preference number: 2 (lower is better)
Translates to: LYLLCFLPLQSLFAP*KVTDMIAMYSCVRL
Trigger: GAGTCTGACACATGAATACATGGCTATCATGTCTGTCACCTTCAATGGGGCAAACAAACTTTGTAATGGTAGGAAACACAACAGGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR GCA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCACAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 2 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR GCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGTCTCCACTGCATTTTaGCTTGCCCTGAAATGTGGC +
Preference number: 2 (lower is better)
Translates to: SQTFSSLISCGLLSHNILVSTAF*LALKCG
Trigger: GCCACATTTCAGGGCAAGGCAAAATGCAGTGGAGAC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCACCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 2 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR-3UTR CCA 90 bp TGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATTGCAAGGAATTCTATTaGACAAATAATCTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: WFSQTFSSLISCGLLSHNCKEFY*TNNLAC
Trigger: ACAAGCCAGATTATTTGTCCAATAGAATTCCTTGCA...ATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 90 bp TGCCCTGAAATGTGGCAAACATATTTTTGTAAATTATTGTACCTGTaGTGTTTCCTACCATTACAAAGTTTGTTTGCCCCATTGAAGGTG +
Preference number: 2 (lower is better)
Translates to: CPEMWQTYFCKLLYL*CFLPLQSLFAPLKV
Trigger: CACCTTCAATGGGGCAAACAAACTTTGTAATGGTAGGAAACACAACAGGTACAATAATTTACAAAAATATGTTTGCCACATTTCAGGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 90 bp TTTTGTAAATTATTGTACCTGTTGTGTTTCCTACCATTACAAAGTTaGTTTGCCCCATTGAAGGTGACAGACATGATAGCCATGTATTCA +
Preference number: 2 (lower is better)
Translates to: FCKLLYLLCFLPLQS*FAPLKVTDMIAMYS
Trigger: TGAATACATGGCTATCATGTCTGTCACCTTCAATGGGGCAAACAAACTTTGTAATGGTAGGAAACACAACAGGTACAATAATTTACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR TCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGAGTACCCAAATACATaGAAAGGGAAAGTACTTTGT +
Preference number: 2 (lower is better)
Translates to: SQTFSSLISCGLLSHNILEYPNT*KGKVLC
Trigger: ACAAAGTACTTTCCCTTTTCATGTATTTGGGTACTC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR GCA 72 bp ACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGA +
Preference number: 3 (lower is better)
Translates to: TWAGPPLKAISS*NQLSYCCLCSR
Trigger: TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 3 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 3 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR TCA 72 bp GCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCAACCAGCTCAGCTACT +
Preference number: 3 (lower is better)
Translates to: ASLEGIPGQVLP*RLSAAATSSAT
Trigger: AGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR GCA 72 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCCACCCTCCTGCTACCT +
Preference number: 3 (lower is better)
Translates to: KAISSCNQLSYC*LCSRHSTLLLP
Trigger: AGGTAGCAGGAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR GCA 72 bp ATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTCCTGCTACCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: ISSCNQLSYCCL*SRHSTLLLPLH
Trigger: ATGAAGAGGTAGCAGGAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CCA 72 bp ATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: MYSLVGITGRHT*AGPPLKAISSC
Trigger: GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 3 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CCA 72 bp GTGGACTGGGAGGGGCAGATCTACCCTCCATGTGGGTaGGCACCATCTAATCAACTGCTAGCGAGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: VDWEGQIYPPCG*APSNQLLARLK
Trigger: TTTTAGCCTCGCTAGCAGTTGATTAGATGGTGCCCACCCACATGGAGGGTAGATCTGCCCCTCCCAGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 3 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCAGCTTGGAGGATTGCTaGAGCCTGAGAGATCGAGGC +
Preference number: 3 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPSLEDC*SLRDRG
Trigger: GCCTCGATCTCTCAGGCTCAAGCAATCCTCCAAGCT...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACATCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGG +
Preference number: 3 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTSAFTS*PLSLVW
Trigger: CCACACTAGAGACAAAGGCAATGAGGTGAACGCAGA...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR-3UTR CAA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCACAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 3 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR CCA 72 bp AAACTAATAGAGAATGTATTCTCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: KLIENVFSGGHH*KAYLGRSSPEG
Trigger: GCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTCTCTATTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CCA 72 bp TGTTGCCAAAGGAAATTAACATTTGAGTCAGTGGACTaGGAGGGGCAGATCTACCCTCCATGTGGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: CCQRKLTFESVD*EGQIYPPCGWA
Trigger: TGCCCACCCACATGGAGGGTAGATCTGCCCCTCCCAGTCCACTGACTCAAATGTTAATTTCCTTTGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCGATATGTACCAACCATaGCTAACTGATCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPDMYQP*LTDPWL
Trigger: CAGCCAAGGATCAGTTAGCAATGGTTGGTACATATC...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR GCA 72 bp AAAGCACTCCAGGCAGAGAGACCACCCTGGGCAAGATaGACAGACGCAAAAGAGCAGGATGCATTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: KALQAERPPWAR*TDAKEQDAFKE
Trigger: TTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATCTTGCCCAGGGTGGTCTCTCTGCCTGGAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGTTCTGCGTTCACCTCA +
Preference number: 3 (lower is better)
Translates to: LLNPSVLQTRDT*CKSFIRSAFTS
Trigger: TGAGGTGAACGCAGAACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR-3UTR CAA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCATCAGAGAAGTGTTACTaGGGTAGGTGGATAGGGGAG +
Preference number: 3 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPSEKCY*GRWIGE
Trigger: CTCCCCTATCCACCTACCCAAGTAACACTTCTCTGA...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CCTCAGCTTGCAGGCGGCCTATTGTGGACTTCATCTTaGGATAGTGTGAGTCAATACTCCTTAATAAACTCC +
Preference number: 3 (lower is better)
Translates to: PQLAGGLLWTSS*DSVSQYSLINS
Trigger: GGAGTTTATTAAGGAGTATTGACTCACACTATCCCAAGATGAAGTCCACAATAGGCCGCCTGCAAGCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTaGCCAGAACCATGGAATCTGGGAAGACAAGTGGGC +
Preference number: 3 (lower is better)
Translates to: QKSRMHLKKSLV*PEPWNLGRQVG
Trigger: GCCCACTTGTCTTCCCAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CGTTCTGCGTTCACCTCATTGCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTACCCACTTCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: RSAFTSLPLSLV*KTIVYLPTSGR
Trigger: CCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR TCA 72 bp CCTCATAAGAACTGGCTTATCTGCCAGGATTCCTTGTaGATAGGCCAATTCCCAAGGCAGGAAAAGTACAAG +
Preference number: 3 (lower is better)
Translates to: PHKNWLICQDSL*IGQFPRQEKYK
Trigger: CTTGTACTTTTCCTGCCTTGGGAATTGGCCTATTCACAAGGAATCCTGGCAGATAAGCCAGTTCTTATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CTACAGGATATGTACCAACCATTGCTAACTGATCCTTaGCTGAGCTTCAGGGGATCTCTGAATCTTCCTATG +
Preference number: 3 (lower is better)
Translates to: LQDMYQPLLTDP*LSFRGSLNLPM
Trigger: CATAGGAAGATTCAGAGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGGTACATATCCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp TCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAGTGGTTTGCAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: SDSKFFSFWTLGPTPVVCNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...GCAAACCACTGGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR TCA 72 bp ACAGATACTACAGGATATGTACCAACCATTGCTAACTaGTCCTTGGCTGAGCTTCAGGGGATCTCTGAATCT +
Preference number: 3 (lower is better)
Translates to: TDTTGYVPTIAN*SLAELQGISES
Trigger: AGATTCAGAGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGGTACATATCCTGTAGTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp AACTCTTTAAAAACTAATAGAGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATACCTGGGCAGGTCCTC +
Preference number: 3 (lower is better)
Translates to: NSLKTNRECILW*ASLEGIPGQVL
Trigger: GAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTCTCTATTAGTTTTTAAAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATGGAATCTGGTGTCTGTGAGGGTGTaGCCAAAGGAAATTAACATT +
Preference number: 3 (lower is better)
Translates to: KSRMHLKKSLVWPEPWNLVSVRV*PKEINI
Trigger: AATGTTAATTTCCTTTGGCAACACCCTCACAGACAC...CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp AAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTGATGTTGATATATAAATTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 3 (lower is better)
Translates to: KTQGHAPNQKSTVMLIYKFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...TTTATATATCAACATCACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR GCA 72 bp CAGTTCTTCCAAACATCACCAAAAGACCCAGGGTCATaGACCAAACCAGAAATCCACTGTGATGTTGATATA +
Preference number: 3 (lower is better)
Translates to: QFFQTSPKDPGS*TKPEIHCDVDI
Trigger: TATATCAACATCACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
3UTR CCA 72 bp ATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGT +
Preference number: 3 (lower is better)
Translates to: IFVPFYLGREQL*FSQTFSSLISC
Trigger: ACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR TCA 72 bp TTGAAGGATGTGAAGTATTGTTCCTGGGTGTGTCTGTaGGGGTGTTGCCAAAGGAAATTAACATTTGAGTCA +
Preference number: 3 (lower is better)
Translates to: LKDVKYCSWVCL*GCCQRKLTFES
Trigger: TGACTCAAATGTTAATTTCCTTTGGCAACACCCTCACAGACACACCCAGGAACAATACTTCACATCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR GCA 72 bp GTACCTGTTGTGTTTCCTACCATTACAAAGTTTGTTTaGCCCATTGAAGGTGACAGACATGATAGCCATGTA +
Preference number: 3 (lower is better)
Translates to: VPVVFPTITKFV*PIEGDRHDSHV
Trigger: TACATGGCTATCATGTCTGTCACCTTCAATGGGGCAAACAAACTTTGTAATGGTAGGAAACACAACAGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CCA 72 bp CTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCTAAAGATAAAAAGAACA +
Preference number: 3 (lower is better)
Translates to: LLNPSVLQTRDT*CKSFILKIKRT
Trigger: TGTTCTTTTTATCTTTAGGATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR-3UTR CAA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTATCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 3 (lower is better)
Translates to: SQTFSSLISCGLLSHNILSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR TCA 72 bp TATCGAAACTCACAGATCAATCCTAACATCACAAAATaGCACAACCAGACATTACATCCTCCTGTTGTGACA +
Preference number: 3 (lower is better)
Translates to: YRNSQINPNITK*HNQTLHPPVVT
Trigger: TGTCACAACAGGAGGATGTAATGTCTGGTTGTGTCATTTTGTGATGTTAGGATTGATCTGTGAGTTTCGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR-3UTR CAA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR TCA 72 bp CAACCAGAGTCCTCAAATAGCGTTCATTTTATCCTTTaGGTCATCCTTTTATATAAAGTCCTTCAAGTATCC +
Preference number: 3 (lower is better)
Translates to: QPESSNSVHFIL*VILLYKVLQVS
Trigger: GGATACTTGAAGGACTTTATATAAAAGGATGACTCAAAGGATAAAATGAACGCTATTTGAGGACTCTGGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACACACATGAAGCCAGGTaGTCCCCGGAGGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHTHEAR*SPEAAA
Trigger: CGCGGCCGCCTCCGGGGACCACCTGGCTTCATGTGT...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
CDS-3UTR TCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCTTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLLGRKC*VACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAA...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCCTACACCAGTGGTTTaGCAGGGACTCTCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSPTPVV*QGLSGL
Trigger: AAGGCCCGAGAGTCCCTGGCAAACCACTGGTGTAGG...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCCCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACC +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPFSLFR*GTRMAT
Trigger: GGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAA...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACC +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSFSLFR*GTRMAT
Trigger: GGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAA...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCTCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSSGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPATKCH*VSSVAH
Trigger: ATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSTQCCS*QPPDAW
Trigger: CCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGT...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLKAISS*NQLSYC
Trigger: GCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCGGTGGGGAACGAGGATaGCGACCCTCTGTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSGGERG*RPSVKL
Trigger: AAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACC...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACC +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHFSLFR*GTRMAT
Trigger: GGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAA...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCATCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPSGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGTCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKSGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCTCGCAGGACTGGGGCTaGTGTCAGCTGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCSQDWG*CQLISF
Trigger: GAAACTGATCAGCTGACACCAGCCCCAGTCCTGCGA...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCGCTCTCGAGGACTACTaGGATTCAGGACCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSALEDY*DSGPSL
Trigger: CAAGCTGGGTCCTGAATCCCAGTAGTCCTCGAGAGC...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCCGGAATCGTGACCTaGGGTATGAATGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTPGIVT*GMNEPW
Trigger: CCAGGGCTCATTCATACCCCAGGTCACGATTCCGGG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSLPLPS*SHKVPL
Trigger: CAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAG...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPLPLPS*SHKVPL
Trigger: CAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAG...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAAAGCTTTACATTCCTaGGGGCGATACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLKALHS*GRYRPL
Trigger: CAGAGGCCGGTATCGCCCTCAGGAATGTAAAGCTTT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAAGCTTTACATTCCTaGGGGCGATACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPKALHS*GRYRPL
Trigger: CAGAGGCCGGTATCGCCCTCAGGAATGTAAAGCTTT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGATCAGTTTCCCCGTTaGAACGCTGGAGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKDQFPR*NAGEGG
Trigger: CCCTCCTTCTCCAGCGTTTCAACGGGGAAACTGATC...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGGGGCTGGTGTCAGCTaGTCAGTTTCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKGAGVS*SVSPLK
Trigger: TTTCAACGGGGAAACTGATCAGCTGACACCAGCCCC...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGGTGGAAATCCACACATaGAGCCAGGTGGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPVEIHT*SQVVPF
Trigger: AAAGGGGACCACCTGGCTTCATGTGTGGATTTCCAC...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACATGAGGAAGTCGGGTaGGGTGTCAGGGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTHEEVG*GVREKE
Trigger: TTCCTTCTCCCTGACACCTCACCCGACTTCCTCATG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLHEATK*HCVSSV
Trigger: CACGGAACTCACGCAGTGGCACTTTGTGGCTTCATG...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSKCCVA*LFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTT...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGATTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRLGRKC*VACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAA...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCTGCCAACCACCAGATaGTTGGGATGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHLPTTR*LGCSSH
Trigger: GTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAG...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACTGCCAACCACCAGATaGTTGGGATGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPLPTTR*LGCSSH
Trigger: GTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAG...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRNQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLSSVAH*NTVYPP
Trigger: AGGCGGGTACACTGTGTTCCAATGTGCCACGGAACT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCTACTTCTCCTTGGCTTaGGGAGGAAGTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSYFSLA*GGSVAW
Trigger: CCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTA...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCCGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSRSSYW*PTQPLS
Trigger: TGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCG...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCGGTGGGGAACGAGGATaGCGACCCTCTGTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ECILWWASLEGIPGQVLPGGERG*RPSVKL
Trigger: AAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACC...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACGGTGGGGAACGAGGATaGCGACCCTCTGTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHGGERG*RPSVKL
Trigger: AAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACC...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAAAGCTTTACATTCCTaGGGGCGATACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKKALHS*GRYRPL
Trigger: CAGAGGCCGGTATCGCCCTCAGGAATGTAAAGCTTT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CAGTGGACTGGGAGGGGCAGATCTACCCTCCATGTGGGTGGGCACCATCTAATCAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QWTGRGRSTLHVGGHHLIKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...GATTAGATGGTGCCCACCCACATGGAGGGTAGATCTGCCCCTCCCAGTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ECILWWASLEGIPGQVLPHEATK*HCVSSV
Trigger: CACGGAACTCACGCAGTGGCACTTTGTGGCTTCATG...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPKCCVA*LFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTT...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCTGCAGGAAGGGATaGAGATGTTCCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTLCRKG*RCSSRY
Trigger: GTACCTGCTGGAACATCTGCATCCCTTCCTGCAGAG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACGTAACCTGTACCCAGTaGTGTTCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHVTCTQ*CSCQPP
Trigger: TGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTAC...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAGTAACCTGTACCCAGTaGTGTTCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTVTCTQ*CSCQPP
Trigger: TGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTAC...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGTAACCTGTACCCAGTaGTGTTCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPVTCTQ*CSCQPP
Trigger: TGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTAC...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPKAISS*NQLSYC
Trigger: GCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCCTGAGCTTGGAGGATTaGTTGAGCCTGAGAGATCGA +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSLSLED*LSLRDR
Trigger: TCGATCTCTCAGGCTCAAGCAATCCTCCAAGCTCAG...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCAAGCATGGTGACACATaGCTGTGGTCCCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCKHGDT*LWSQLL
Trigger: AAGTAGCTGGGACCACAGGCATGTGTCACCATGCTT...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCACACATGAAGCCAGGTaGTCCCCGGAGGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSTHEAR*SPEAAA
Trigger: CGCGGCCGCCTCCGGGGACCACCTGGCTTCATGTGT...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
CDS-3UTR CCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLSDTSP*LGEEVL
Trigger: CAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCGGCCTCTGGACACTTTaGGATTTTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSGLWTL*DFLPVP
Trigger: AGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCC...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGCAACCACCAGATGCTTaGGATGCTCCTCACACTTGT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPQPPDA*DAPHTC
Trigger: ACAAGTGTGAGGAGCATCCCAAGCATCTGGTGGTTG...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGTTTGAGTCAGTGGACTaGGAGGGGCAGATCTACCCT +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKFESVD*EGQIYP
Trigger: AGGGTAGATCTGCCCCTCCCAGTCCACTGACTCAAA...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGGTGGAAATCCACACATaGAGCCAGGTGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMVEIHT*SQVVPG
Trigger: TCCGGGGACCACCTGGCTTCATGTGTGGATTTCCAC...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
CDS-3UTR TCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGAGAAGCCAACTTGCTaGGTCTTCTGGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKEKPTC*VFWPSS
Trigger: AGATGAAGGCCAGAAGACTCAGCAAGTTGGCTTCTC...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPTQCCS*QPPDAW
Trigger: CCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGT...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATGAGCTTCATCCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYELHPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTC...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAAAGACCCAGGGTCATaGACCAAACCAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLKDPGS*TKPEIH
Trigger: GTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLSDTSP*LGEEVL
Trigger: CAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGT +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSQTRDT*CKSFIR
Trigger: ACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 4 (lower is better)
Translates to: ECILWWASLEGIPGQVLPFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
3UTR CAA 72 bp CACTGTGTCCTGATTCGTCGCCTTTTCTCCCCTCTTTaGTGGACGCCTTCTCACCTGACACCACCACTTCAC +
Preference number: 4 (lower is better)
Translates to: HCVLIRRLFSPL*WTPSHLTPPLH
Trigger: GTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAAAGGCGACGAATCAGGACACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp ACCCTGAACATCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAGCCTGCTAGGCAGGTaGAGCCAGGACTTACCGTTC +
Preference number: 4 (lower is better)
Translates to: TLNIRLQVLQLLDSWTYTSLLGR*SQDLPF
Trigger: GAACGGTAAGTCCTGGCTTCACCTGCCTAGCAGGCT...GGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGATGTTCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCCACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLHFGIF*LYLFQS
Trigger: ACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTG...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACGAGCTTCATCCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHELHPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTC...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAAAGACCCAGGGTCATaGACCAAACCAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKKDPGS*TKPEIH
Trigger: GTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAAAGACCCAGGGTCATaGACCAAACCAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRKDPGS*TKPEIH
Trigger: GTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTT...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACAAAGACCCAGGGTCATaGACCAAACCAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHKDPGS*TKPEIH
Trigger: GTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTT...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCCGTTCTGCGTTCAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SVLQTRDTWCKSFIRSAFSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...GAACGCAGAACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGACGTGAGGGTTCAGTaGACCACTTTCTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPDVRVQ*TTFSPF
Trigger: AAAAGGAGAGAAAGTGGTGCACTGAACCCTCACGTC...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTACACATGAAGCCAGGTaGTCCCCGGAGGCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFTHEAR*SPEAAA
Trigger: CGCGGCCGCCTCCGGGGACCACCTGGCTTCATGTGT...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
CDS-3UTR CCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAAACAAATGGCACTTTTaGTCACACCCACTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTNKWHF*SHPLPS
Trigger: GGAAGGCAGTGGGTGTGACCAAAAGTGCCATTTGTT...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCAACAAATGGCACTTTTaGTCACACCCACTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ECILWWASLEGIPGQVLPNKWHF*SHPLPS
Trigger: GGAAGGCAGTGGGTGTGACCAAAAGTGCCATTTGTT...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAACAAATGGCACTTTTaGTCACACCCACTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKNKWHF*SHPLPS
Trigger: GGAAGGCAGTGGGTGTGACCAAAAGTGCCATTTGTT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACAACAAATGGCACTTTTaGTCACACCCACTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHNKWHF*SHPLPS
Trigger: GGAAGGCAGTGGGTGTGACCAAAAGTGCCATTTGTT...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAAGAAGTCACTAGTGTaGCCAGAACCATGGAATCTG +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSKKSLV*PEPWNL
Trigger: CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAATGCTAGTTACCCATaGCAATATGGATGGGGATCA +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPNASYP*QYGWGS
Trigger: TGATCCCCATCCATATTGTCATGGGTAACTAGCATT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAATCTCTCTGCTTCACTaGAGGCAAGAAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPISLLH*RQESFK
Trigger: CTTGAAGCTTTCTTGCCTGCAGTGAAGCAGAGAGAT...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAATCTCTCTGCTTCACTaGAGGCAAGAAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTISLLH*RQESFK
Trigger: CTTGAAGCTTTCTTGCCTGCAGTGAAGCAGAGAGAT...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSHFGIF*LYLFQS
Trigger: ACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTG...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCTTCACCTTGAAAAACTaGTCTCTGCTTAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSFTLKN*SLLRAV
Trigger: TACTGCCCTAAGCAGAGAGCAGTTTTTCAAGGTGAA...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAGTGGTTTGCAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: SDSKFFSFWTLGPTPVVCNQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...GCAAACCACTGGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCACCCGGCGGAGAAGTaGTGGGGGCGACCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSHPAEK*WGRPRN
Trigger: ATTCCGGGGTCGCCCCCAGCACTTCTCCGCCGGGTG...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR CCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGTACTTCTCCTTGGCTTaGGGAGGAAGTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMYFSLA*GGSVAW
Trigger: CCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTA...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCGGCCTCTGGACACTTTaGGATTTTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPGLWTL*DFLPVP
Trigger: AGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCC...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCCGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ECILWWASLEGIPGQVLPRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 4 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp CTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCGGCTGTAGTGAGCCATaGTCACGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLNPSVLQTRDTWCKSFIGCSEP*SRHCTP
Trigger: TGGAGTGCAGTGGCGTGACCATGGCTCACTACAGCC...GATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATCGGCAGCACCTCGTCTaGCTCCCCCGGCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYRQHLV*LPRPAA
Trigger: TGCTGCGGGCCGGGGGAGCCAGACGAGGTGCTGCCG...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp TCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCCGTTCTGCGTTCACCTCATCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SRLVTLGVRASSVLRSPHLPLPS*SHKVPL
Trigger: CAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAG...ATGAGGTGAACGCAGAACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR TCA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCCCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCTGTCACTGCACTCAGTaGGCCCCCAGTCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSCHCTQ*APSLQD
Trigger: GTCCTGTAGACTGGGGGCTCACTGAGTGCAGTGACA...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLSHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTHFGIF*LYLFQS
Trigger: ACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGATTCACCTTGAAAAACTaGTCTCTGCTTAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRFTLKN*SLLRAV
Trigger: TACTGCCCTAAGCAGAGAGCAGTTTTTCAAGGTGAA...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCAGTGTACCCGCCTCTaGGCAAGAGCCGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSQCTRL*ARAVEI
Trigger: GATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCCCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: LLNPSVLQTRDTWCKSFIPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...GATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp TTGTCTCTAGTGTGGAAGACCATTGTATATTTACCCACTTCAGGCAGGGGCCGGGGCGATACCGGCCTCTaGACACTTTGGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSLVWKTIVYLPTSGRGRGDTGL*TLWDFL
Trigger: CAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCC...CCGGCCCCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGCAACCACCAGATGCTTaGGATGCTCCTCACACTTGT +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMQPPDA*DAPHTC
Trigger: ACAAGTGTGAGGAGCATCCCAAGCATCTGGTGGTTG...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCGAAATTTTCATTCTTTaGAGCTCAACCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCEIFIL*SSTLSL
Trigger: CAGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTC...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GACATGATAGCCATGTATTCATGTGTCAGACTCCACGTGAGAACCCGGGGACCCGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: DMIAMYSCVRLHVRTRGPGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...GGGTCCCCGGGTTCTCACGTGGAGTCTGACACATGAATACATGGCTATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCACAGTCTTTAACAAATaGCACTTTTGGTCACACCCA +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCTVFNK*HFWSHP
Trigger: TGGGTGTGACCAAAAGTGCCATTTGTTAAAGACTGT...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTGGCCCCTCGCAGGACTaGGGCTGGTGTCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSGPSQD*GWCQLI
Trigger: GATCAGCTGACACCAGCCCCAGTCCTGCGAGGGGCC...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCGTGGAAATCCACACATaGAGCCAGGTGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSVEIHT*SQVVPG
Trigger: TCCGGGGACCACCTGGCTTCATGTGTGGATTTCCAC...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
CDS-3UTR TCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCAAAGTGCCACTGCGTaGGTTCCGTGGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSQSATA*VPWHIG
Trigger: TCCAATGTGCCACGGAACTCACGCAGTGGCACTTTG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp GAGTTGAGAACTGTAGACGTGAGGGTTCAGTGCACCACTTTCTCTCCTTTTGTGCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ELRTVDVRVQCTTFSPFVLPLPS*SHKVPL
Trigger: CAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAG...CACAAAAGGAGAGAAAGTGGTGCACTGAACCCTCACGTCTACAGTTCTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: LSAAATSSATAAFAADTPPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAGGGGCTTTTTCAGGTTaGTGCACCCGGCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPGAFSG*CTRRRS
Trigger: ACTTCTCCGCCGGGTGCATCAACCTGAAAAAGCCCC...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAACTGAAGATACAATaGCTGGTTTTTCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLQLKIQ*LVFLSS
Trigger: ACTACTGAGAAAAACCAGGCATTGTATCTTCAGTTG...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGCAACTGAAGATACAATaGCTGGTTTTTCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPQLKIQ*LVFLSS
Trigger: ACTACTGAGAAAAACCAGGCATTGTATCTTCAGTTG...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPSHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLSHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSSHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAGTTGAGAACTGTAGACGTGAGGGTTCAGTGCACCACTTTCTCTCCTTTTGTGCTCTGCAGGAAGGGATaGAGATGTTCCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ELRTVDVRVQCTTFSPFVLCRKG*RCSSRY
Trigger: GTACCTGCTGGAACATCTGCATCCCTTCCTGCAGAG...CACAAAAGGAGAGAAAGTGGTGCACTGAACCCTCACGTCTACAGTTCTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp AGTGTGGAAGACCATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAAATTTTACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: SVEDHCIFTHFRQGPGNFTQCCS*QPPDAW
Trigger: CCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGT...AAAATTTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR GCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACACAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSFSLFR*GTRMAT
Trigger: GGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAA...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCATCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSSGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCCAGGTGGTCCCCTTTaGAGAAAGGTCAAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSPGGPL*RKVKGR
Trigger: GCGACCTTTGACCTTTCTCCAAAGGGGACCACCTGG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTATKCH*VSSVAH
Trigger: ATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAAATTTTCATTCTTTGGAGGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: HCIFTHFRQGPGNFHSLEATKCH*VSSVAH
Trigger: ATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC...CTCCAAAGAATGAAAATTTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR GCA 90 bp TTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FQTSPKDPGSCTKPEIHCHEATK*HCVSSV
Trigger: CACGGAACTCACGCAGTGGCACTTTGTGGCTTCATG...ACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR GCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCATTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSLGRKC*VACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAA...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAACTGAAGATACAATaGCTGGTTTTTCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRQLKIQ*LVFLSS
Trigger: ACTACTGAGAAAAACCAGGCATTGTATCTTCAGTTG...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACATACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGATACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCTGCCAACCACCAGATaGTTGGGATGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSLPTTR*LGCSSH
Trigger: GTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAG...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAAATTTTCATTCTTTGGAGCTGCCAACCACCAGATaGTTGGGATGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: HCIFTHFRQGPGNFHSLELPTTR*LGCSSH
Trigger: GTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAG...CTCCAAAGAATGAAAATTTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR GCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPTQCCS*QPPDAW
Trigger: CCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGT...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ACCCTGAACATCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAAAGACCCAGGGTCATaGACCAAACCAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TLNIRLQVLQLLDSWTYTKDPGS*TKPEIH
Trigger: GTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTT...GGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGATGTTCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSNQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSNQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPKAISS*NQLSYC
Trigger: GCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCTACTTCTCCTTGGCTTaGGGAGGAAGTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSYFSLA*GGSVAW
Trigger: CCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTA...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSRSSYW*PTQPLS
Trigger: TGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTGGCGATACCGGCCTCTaGACACTTTGGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: REQLWFSQTFSSLISCGLGDTGL*TLWDFL
Trigger: CAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCC...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTCCGGCGGAGAAGTGCTaGGGGCGACCCCGGAATCGT +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAPAEKC*GRPRNR
Trigger: ACGATTCCGGGGTCGCCCCCAGCACTTCTCCGCCGG...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAAAAGCTTTACATTCCTaGGGGCGATACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSKALHS*GRYRPL
Trigger: CAGAGGCCGGTATCGCCCTCAGGAATGTAAAGCTTT...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFATKCH*VSSVAH
Trigger: ATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTKCCVA*LFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPKCCVA*LFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTT...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCTCTGCAGGAAGGGATaGAGATGTTCCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSLCRKG*RCSSRY
Trigger: GTACCTGCTGGAACATCTGCATCCCTTCCTGCAGAG...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIISYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: WFSQTFSSLISCGLLSHNSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...ATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTCAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSAQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSKAISS*NQLSYC
Trigger: GCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AATCAGTTCTTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAAAAGGCTATCAGCAGCTaGAACCAGCTCAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: NQFFQTSPKDPGSCTKPEKAISS*NQLSYC
Trigger: GCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT...TTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAAGAACTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp AATCAGTTCTTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAAAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: NQFFQTSPKDPGSCTKPESSVAH*NTVYPP
Trigger: AGGCGGGTACACTGTGTTCCAATGTGCCACGGAACT...TTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAAGAACTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATACTTCTCCTTGGCTTaGGGAGGAAGTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPYFSLA*GGSVAW
Trigger: CCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTA...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCACGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSRSSYW*PTQPLS
Trigger: TGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCG...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGGCGATACCGGCCTCTaGACACTTTGGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSGDTGL*TLWDFL
Trigger: CAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCC...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CACCTCATTGCCTTTGTCTCTAGTGTGGAAGACCATTGTATATTTACCCACTTCGGTGGGGAACGAGGATaGCGACCCTCTGTAAAGCTT +
Preference number: 4 (lower is better)
Translates to: HLIAFVSSVEDHCIFTHFGGERG*RPSVKL
Trigger: AAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACC...GAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACC +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSFSLFR*GTRMAT
Trigger: GGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAA...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTCAACCACCAGATGCTTaGGATGCTCCTCACACTTGT +
Preference number: 4 (lower is better)
Translates to: REQLWFSQTFSSLISCGLQPPDA*DAPHTC
Trigger: ACAAGTGTGAGGAGCATCCCAAGCATCTGGTGGTTG...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCAACCACCAGATGCTTaGGATGCTCCTCACACTTGT +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSQPPDA*DAPHTC
Trigger: ACAAGTGTGAGGAGCATCCCAAGCATCTGGTGGTTG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAACAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGT +
Preference number: 4 (lower is better)
Translates to: EQLLNPSVLQTRDTWCKSQTRDT*CKSFIR
Trigger: ACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...GCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTTCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSASGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATGGAATCTGCTACTTTTGAGGTTTTaGGACCCGGGCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSRMHLKKSLVWPEPWNLLLLRF*DPGWLP
Trigger: AGGAAGCCAGCCCGGGTCCCAAAACCTCAAAAGTAG...CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp ACATATGTCTCCACTGCATTTTGCCTTGCCCTGAAATGTGGCAAACATATTTTTGTGGAAATCCACACATaGAGCCAGGTGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TYVSTAFCLALKCGKHIFVEIHT*SQVVPG
Trigger: TCCGGGGACCACCTGGCTTCATGTGTGGATTTCCAC...AAAAATATGTTTGCCACATTTCAGGGCAAGGCAAAATGCAGTGGAGACATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGCCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTGGGCAGGTCCTCCCCTaGAGGCTATCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAGQVLP*RLSAAA
Trigger: TGCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCC...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTGCCAACCACCAGATaGTTGGGATGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSLPTTR*LGCSSH
Trigger: GTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAG...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTGTAACCTGTACCCAGTaGTGTTCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFVTCTQ*CSCQPP
Trigger: TGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTAC...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCACAGGACTTACCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPQDLPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGTAAGTCCTG...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAGTCTCCACTGCATTTTaGCTTGCCCTGAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTVSTAF*LALKCG
Trigger: GCCACATTTCAGGGCAAGGCAAAATGCAGTGGAGAC...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTTACTTCTCCTTGGCTTaGGGAGGAAGTGTTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFYFSLA*GGSVAW
Trigger: CCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTA...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTAACAAATGGCACTTTTaGTCACACCCACTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: REQLWFSQTFSSLISCGLNKWHF*SHPLPS
Trigger: GGAAGGCAGTGGGTGTGACCAAAAGTGCCATTTGTT...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATACCACGAAGTAGTTACTaGTGGCCCACCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIPRSSY*WPTQPL
Trigger: CAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGG...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAGGCCTCTGGACACTTTaGGATTTTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPGLWTL*DFLPVP
Trigger: AGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCC...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCGGCCTCTGGACACTTTaGGATTTTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSGLWTL*DFLPVP
Trigger: AGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCC...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGT +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSQTRDT*CKSFIR
Trigger: ACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: REQLWFSQTFSSLISCGLGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAACAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: EQLLNPSVLQTRDTWCKSECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...GCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTTCCCCGTTGAAACGCTaGAGAAGGAGGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSSPLKR*RRRVSR
Trigger: CCTGGAAACCCTCCTTCTCCAGCGTTTCAACGGGGA...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR TCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGGACGCCTTCTCACCTaGCACCACCACTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVGRLLT*HHHFTD
Trigger: ATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATGGAATCTGTGGATAGGGGAGATGTaGAGGAGGAGACTACAGAAT +
Preference number: 4 (lower is better)
Translates to: KSRMHLKKSLVWPEPWNLWIGEM*RRRLQN
Trigger: ATTCTGTAGTCTCCTCCTTCACATCTCCCCTATCCA...CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSHEATK*HCVSSV
Trigger: CACGGAACTCACGCAGTGGCACTTTGTGGCTTCATG...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIKCCVA*LFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTT...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTTTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVLGRKC*VACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAA...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCATCTCTCTGCTTCACTaGAGGCAAGAAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSISLLH*RQESFK
Trigger: CTTGAAGCTTTCTTGCCTGCAGTGAAGCAGAGAGAT...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTTCTCCCCTCTTTTGTGGACGCCTTCTCACCTGACACCACCACTTCACAGATGTACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FLPSFVDAFSPDTTTSQMYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...CATCTGTGAAGTGGTGGTGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGAGCTTCATCCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSELHPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTC...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATCAGTGTACCCGCCTCTaGGCAAGAGCCGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYQCTRL*ARAVEI
Trigger: GATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTG...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSASSVAH*NTVYPP
Trigger: AGGCGGGTACACTGTGTTCCAATGTGCCACGGAACT...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTSDTSP*LGEEVL
Trigger: CAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPSDTSP*LGEEVL
Trigger: CAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACT...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTCGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSARSSYW*PTQPLS
Trigger: TGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCG...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTGATGTTGATATATAAAGGCGATACCGGCCTCTaGACACTTTGGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KTQGHAPNQKSTVMLIYKGDTGL*TLWDFL
Trigger: CAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCC...TTTATATATCAACATCACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACACAGACTCGTGACACTTaGTGTAAGAGCTTCATCCGT +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTQTRDT*CKSFIR
Trigger: ACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: REQLWFSQTFSSLISCGLECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GAACAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCGCTATTTTGTTGGAGTaGTTGACTCTACCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: EQLLNPSVLQTRDTWCKSAILLE*LTLPKG
Trigger: CCCTTTTGGTAGAGTCAACCACTCCAACAAAATAGC...GCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 72 bp GAGTGTCAACTTGATTGGATTGAAGGATGTGAAGTATaGTTCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ECQLDWIEGCEV*FLGVSVRVLPK
Trigger: CTTTGGCAACACCCTCACAGACACACCCAGGAACAATACTTCACATCCTTCAATCCAATCAAGTTGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp GAACAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCGAACTTGATGACAACTaGAGATACAATGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EQLLNPSVLQTRDTWCKSELDDN*RYNAWF
Trigger: AAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTC...GCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR TCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATACCAACCATTGCTAACTaGTCCTTGGCTGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIPTIAN*SLAELQ
Trigger: CTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGG...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACAT +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIATKCH*VSSVAH
Trigger: ATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVHEATK*HCVSSV
Trigger: CACGGAACTCACGCAGTGGCACTTTGTGGCTTCATG...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAATCTCTCTGCTTCACTaGAGGCAAGAAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTISLLH*RQESFK
Trigger: CTTGAAGCTTTCTTGCCTGCAGTGAAGCAGAGAGAT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAATCTCTCTGCTTCACTaGAGGCAAGAAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSISLLH*RQESFK
Trigger: CTTGAAGCTTTCTTGCCTGCAGTGAAGCAGAGAGAT...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNITQCCS*QPPDAW
Trigger: CCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAAGCTACTGCTGCCTTTaGAGCCGACACTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKSYCCL*SRHSTL
Trigger: GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCT...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAACAGCTCAGCTACTGCTaGCTTTGCAGCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKQLSYC*LCSRHS
Trigger: GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTG...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAAACCAGCTCAGCTACTaGTGCCTTTGCAGCCGACAC +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNINQLSY*CLCSRH
Trigger: GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AATCAGTTCTTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAACAACCCTTGAAAAACTaGTCTCTGCTTAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: NQFFQTSPKDPGSCTKPEQPLKN*SLLRAV
Trigger: TACTGCCCTAAGCAGAGAGCAGTTTTTCAAGGGTTG...TTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAAGAACTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVSSVAH*NTVYPP
Trigger: AGGCGGGTACACTGTGTTCCAATGTGCCACGGAACT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVRSSYW*PTQPLS
Trigger: TGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCG...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAACTGGAAGGCATACCTaGGCAGGTCCTCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILTGRHT*AGPPLK
Trigger: CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGT...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTTCTGGTGGGCATCACTaGAAGGCATACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCASGGHH*KAYLGR
Trigger: CCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTTACCCTCCATGTGGGTaGGCACCATCTAATCAACTG +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSAYPPCG*APSNQL
Trigger: CAGTTGATTAGATGGTGCCCACCCACATGGAGGGTA...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 72 bp CAAGGAATACAGATACTACAGGATATGTACCAACCATaGCTAACTGATCCTTGGCTGAGCTTCAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: QGIQILQDMYQP*LTDPWLSFRGS
Trigger: AGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAATGGTTGGTACATATCCTGTAGTATCTGTATTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 72 bp AAGAGCTTCATCCGTTCTGCGTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACCATTGTATATTTACCC +
Preference number: 4 (lower is better)
Translates to: KSFIRSAFTSLP*SLVWKTIVYLP
Trigger: GGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
3UTR CAA 72 bp TGGTGTAAGAGCTTCATCCGTTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGGAAGACCATTGTATAT +
Preference number: 4 (lower is better)
Translates to: WCKSFIRSAFTS*PLSLVWKTIVY
Trigger: ATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTCTTACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR TCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTACAAAGTGCCACTGCGTaGGTTCCGTGGCACATTGGA +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILQSATA*VPWHIG
Trigger: TCCAATGTGCCACGGAACTCACGCAGTGGCACTTTG...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATCTGCTCCAACAGTCTaGGAGTCCTTTCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIISAPTV*ESFLSL
Trigger: GAGAGAAAGAAAGGACTCTCAGACTGTTGGAGCAGA...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359213.7
CDS-3UTR TCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCGAACTTGATGACAACTaGAGATACAATGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSELDDN*RYNAWF
Trigger: AAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTC...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGAACCATGGAATCTGCCCATTGGCCAAAGATaGGACAATATGAGTACCAAA +
Preference number: 4 (lower is better)
Translates to: KSRMHLKKSLVWPEPWNLPIGQR*DNMSTK
Trigger: TTTGGTACTCATATTGTCTCATCTTTGGCCAATGGG...CAGATTCCATGGTTCTGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCTTCAGGGGATCTCTaGATCTTCCTATGTTATAAG +
Preference number: 4 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSASGDL*IFLCYK
Trigger: CTTATAACATAGGAAGATTCAGAGATCCCCTGAAGC...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAATTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKLGRKC*VACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAA...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATACTCTGCAGGAAGGGATaGAGATGTTCCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNILCRKG*RCSSRY
Trigger: GTACCTGCTGGAACATCTGCATCCCTTCCTGCAGAG...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTGAGCTTCATCCGTTCTaGGTTCACCTCATTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSAELHPF*VHLIAF
Trigger: AAAGGCAATGAGGTGAACGCAGAACGGATGAAGCTC...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAGGACCACACAGGTCATaGACTCAAAGTGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKGPHRS*TQSGGR
Trigger: CCTACCCCCACTTTGAGTGCATGACCTGTGTGGTCC...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCATTACAAAGTTTGTTTaGCCCATTGAAGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LLNPSVLQTRDTWCKSFIITKFV*PIEGDR
Trigger: TCTGTCACCTTCAATGGGGCAAACAAACTTTGTAAT...GATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGGCCTCTGGACACTTTaGGATTTTCTGCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVGLWTL*DFLPVP
Trigger: AGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATTTCAGTAACGCTGAAAGAGAGAAATCCACCAAGTGAAGAAGGTGAAGGAAAACAACCACCAGATGCTTaGGATGCTCCTCACACTTGT +
Preference number: 4 (lower is better)
Translates to: ISVTLKERNPPSEEGEGKQPPDA*DAPHTC
Trigger: ACAAGTGTGAGGAGCATCCCAAGCATCTGGTGGTTG...TTTTCCTTCACCTTCTTCACTTGGTGGATTTCTCTCTTTCAGCGTTACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTTTCTCCCCTCTTTTGTaGACGCCTTCTCACCTGACA +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVFSPLL*TPSHLT
Trigger: TGTCAGGTGAGAAGGCGTCCACAAAAGAGGGGAGAA...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGTGTGGAAGACCATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAAATTTTACAGTCTTTAACAAATaGCACTTTTGGTCACACCCA +
Preference number: 4 (lower is better)
Translates to: SVEDHCIFTHFRQGPGNFTVFNK*HFWSHP
Trigger: TGGGTGTGACCAAAAGTGCCATTTGTTAAAGACTGT...AAAATTTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp ATTTCAGTAACGCTGAAAGAGAGAAATCCACCAAGTGAAGAAGGTGAAGGAAAAGTGTGGCCAGAACCATaGAATCTGGGAAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: ISVTLKERNPPSEEGEGKVWPEP*NLGRQV
Trigger: CACTTGTCTTCCCAGATTCCATGGTTCTGGCCACAC...TTTTCCTTCACCTTCTTCACTTGGTGGATTTCTCTCTTTCAGCGTTACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCALPLPS*SHKVPL
Trigger: CAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAG...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAGAACTTGATGACAACTaGAGATACAATGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPELDDN*RYNAWF
Trigger: AAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTC...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTAAAGCTTTACATTCCTaGGGGCGATACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAKALHS*GRYRPL
Trigger: CAGAGGCCGGTATCGCCCTCAGGAATGTAAAGCTTT...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAAGAATCCATTCACCTTaGAAAACTGCTCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTRIHSP*KTALCL
Trigger: TAAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTAATACAACCAGTTTATaGGAAAATAGAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQTSPKDPGSCTKPEIHCNTTSL*ENRGQE
Trigger: CTCCTGACCTCTATTTTCTCATAAACTGGTTGTATT...ACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAACTCTGCAGGAAGGGATaGAGATGTTCCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKLCRKG*RCSSRY
Trigger: GTACCTGCTGGAACATCTGCATCCCTTCCTGCAGAG...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAGTAACCTGTACCCAGTaGTGTTCCTGCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKVTCTQ*CSCQPP
Trigger: TGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTAC...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCT +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCASSVAH*NTVYPP
Trigger: AGGCGGGTACACTGTGTTCCAATGTGCCACGGAACT...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAGGCGATACCGGCCTCTaGACACTTTGGGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKGDTGL*TLWDFL
Trigger: CAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCC...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAACAGTCTTTAACAAATaGCACTTTTGGTCACACCCA +
Preference number: 4 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTTVFNK*HFWSHP
Trigger: TGGGTGTGACCAAAAGTGCCATTTGTTAAAGACTGT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTATGCATAGATTAGACTaGCAATATCGAAACTCACAG +
Preference number: 4 (lower is better)
Translates to: FQTSPKDPGSCTKPEIHCMHRLD*QYRNSQ
Trigger: CTGTGAGTTTCGATATTGCCAGTCTAATCTATGCAT...ACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTGAACTTGATGACAACTaGAGATACAATGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFELDDN*RYNAWF
Trigger: AAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTC...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTAAGTTCACTGTGTCCTaGTTCGTCGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAKFTVS*FVAFSP
Trigger: GGGAGAAAAGGCGACGAATCAGGACACAGTGAACTT...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp ATTTCAGTAACGCTGAAAGAGAGAAATCCACCAAGTGAAGAAGGTGAAGGAAAAAAAGAAGAGAGGCCATaGGTTGAGAACTGTAGACGT +
Preference number: 4 (lower is better)
Translates to: ISVTLKERNPPSEEGEGKKEERP*VENCRR
Trigger: ACGTCTACAGTTCTCAACTCATGGCCTCTCTTCTTT...TTTTCCTTCACCTTCTTCACTTGGTGGATTTCTCTCTTTCAGCGTTACTGAAAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTAAGGAAATTAACATTTaGGTCAGTGGACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVKEINI*VSGLGG
Trigger: CCCTCCCAGTCCACTGACTCAAATGTTAATTTCCTT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAGAGTACCCAAATACATaGAAAGGGAAAGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPEYPNT*KGKVLC
Trigger: ACAAAGTACTTTCCCTTTTCATGTATTTGGGTACTC...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAACTGAAGATACAATaGCTGGTTTTTCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSQLKIQ*LVFLSS
Trigger: ACTACTGAGAAAAACCAGGCATTGTATCTTCAGTTG...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTAACATATGTCTCCACTaGATTTTGCCTTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSNICLH*ILPCPE
Trigger: TTCAGGGCAAGGCAAAATGCAGTGGAGACATATGTT...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIGREQL*FSQTFS
Trigger: GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCC...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAAGAGAATGTATTCTCTaGTGGGCATCACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIRECIL*WASLEG
Trigger: GCCTTCCAGTGATGCCCACCAGAGAATACATTCTCT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATGCAAGGAATTCTATTaGACAAATAATCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NYSTHLFSRLVTLGVRASCKEFY*TNNLAC
Trigger: ACAAGCCAGATTATTTGTCCAATAGAATTCCTTGCA...TGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCAGACTCGTGACACTTaGTGTAAGAGCTTCATCCTA +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVQTRDT*CKSFIL
Trigger: TAGGATGAAGCTCTTACACCAAGTGTCACGAGTCTG...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAAGAATCCATTCACCTTaGAAAACTGCTCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIRIHSP*KTALCL
Trigger: TAAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCT...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATCCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: WFSQTFSSLISCGLLSHNPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...ATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CACCTCATTGCCTTTGTCTCTAGTGTGGAAGACCATTGTATATTTACCCACTTCTACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLIAFVSSVEDHCIFTHFYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...GAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILSDTSP*LGEEVL
Trigger: CAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACT...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGAAATTTTCATTCTTTaGAGCTCAACCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIEIFIL*SSTLSL
Trigger: CAGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTC...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AATCAGTTCTTCCAAACATCACCAAAAGACCCAGGGTCATGCACCAAACCAGAACCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: NQFFQTSPKDPGSCTKPEPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...TTCTGGTTTGGTGCATGACCCTGGGTCTTTTGGTGATGTTTGGAAGAACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CCA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCACCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATACGTACCTTTCTACCTTaGACGAGAACAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIRTFLP*TRTTLV
Trigger: AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACG...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTACAGTCTTTAACAAATaGCACTTTTGGTCACACCCA +
Preference number: 4 (lower is better)
Translates to: RKLSCYNCFILYITRSSATVFNK*HFWSHP
Trigger: TGGGTGTGACCAAAAGTGCCATTTGTTAAAGACTGT...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTTATCAGCAGTGTTCATaGCATCAAGAATCTTCATAC +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFYQQCS*HQESSY
Trigger: GTATGAAGATTCTTGATGCCATGAACACTGCTGATA...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTTTGCTAACTGATCCTTaGCTGAGCTTCAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCALLTDP*LSFRGS
Trigger: AGATCCCCTGAAGCTCAGCCAAGGATCAGTTAGCAA...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTAGAATCCATTCACCTTaGAAAACTGCTCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVRIHSP*KTALCL
Trigger: TAAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR GCA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIISHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp AAGACCCAGGGTCATGCACCAAACCAGAAATCCACTGTGATGTTGATATATAAATACCTTCTTCGTGGATaGTTCATTAGTCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTQGHAPNQKSTVMLIYKYLLRG*FISQSF
Trigger: AAAACTCTGACTAATGAAGCATCCACGAAGAAGGTA...TTTATATATCAACATCACAGTGGATTTCTGGTTTGGTGCATGACCCTGGGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR GCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATCACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYHFGIF*LYLFQS
Trigger: ACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTG...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGAAATTTTCATTCTTTaGAGCTCAACCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVEIFIL*SSTLSL
Trigger: CAGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFPLSLV*KTIVYL
Trigger: TAAATATACAATGGTCTTCCACACTAGAGACAAAGG...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAGAATGTATTCTCTGGTaGGCATCACTGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKECILW*ASLEGI
Trigger: TATGCCTTCCAGTGATGCCCACCAGAGAATACATTC...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAAAGTTTGTCTGTAGGTaGGTACATAGCTTTCACGAG +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIKFVCR*VHSFHE
Trigger: CTCGTGAAAGCTATGTACCCACCTACAGACAAACTT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
3UTR CAA 72 bp ATGAATAACAGTATTGTATCTTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGTTCTCTCAGACATTCA +
Preference number: 4 (lower is better)
Translates to: MNNSIVSSYLST*DENNSGSLRHS
Trigger: TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR CAA 72 bp TTGTGTTTCCTACCATTACAAAGTTTGTTTGCCCCATaGAAGGTGACAGACATGATAGCCATGTATTCATGT +
Preference number: 4 (lower is better)
Translates to: LCFLPLQSLFAP*KVTDMIAMYSC
Trigger: ACATGAATACATGGCTATCATGTCTGTCACCTTCAATGGGGCAAACAAACTTTGTAATGGTAGGAAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTATTCACCTTGAAAAACTaGTCTCTGCTTAGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILFTLKN*SLLRAV
Trigger: TACTGCCCTAAGCAGAGAGCAGTTTTTCAAGGTGAA...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR TCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGAACTTGATGACAACTaGAGATACAATGCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILELDDN*RYNAWF
Trigger: AAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR TCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAACCACCACTTCACAGATaGTTGTACAGGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKPPLHR*LYRINE
Trigger: TTCATTTATCCTGTACAATCATCTGTGAAGTGGTGG...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAAGCCATGAACTCCTTTaGTTTAGGAATCTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNISHELL*FRNLLN
Trigger: ATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTGAAATTTTCATTCTTTaGAGCTCAACCCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAEIFIL*SSTLSL
Trigger: CAGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTC...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATGAGTGTCAACTTGATTaGATTGAAGGATGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYECQLD*IEGCEV
Trigger: TACTTCACATCCTTCAATCCAATCAAGTTGACACTC...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR TCA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTCCTAACATCACAAAATaGCACAACCAGACATTACAT +
Preference number: 4 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAPNITK*HNQTLH
Trigger: ATGTAATGTCTGGTTGTGTCATTTTGTGATGTTAGG...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR GCA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATCAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATACAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
3UTR CAA 72 bp TTAACCCTCATGATCAAAATGACTAAGAAAGCTGTCTaGTTACAACTGTTTTATACTCTACATCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LTLMIKMTKKAV*LQLFYTLHHQE
Trigger: CTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCTTAGTCATTTTGATCATGAGGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTACAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SQTFSSLISCGLLSHNILQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR GCA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAACAGGTTCTTAATGTGTaGTACTATTTGAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKQVLNV*YYLKSL
Trigger: TAGAGACTTCAAATAGTAGCACACATTAAGAACCTG...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS GCA 90 bp GGCCGTCGCCCGGCTACCCTCGCACGGCGCCCGTGTCCAGGGAACTaGATTTCCCGGGCGCCGGCGGAGCCAGCGTACTCACCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GRRPATLARRPCPGN*ISRAPAEPAYSPRR
Trigger: CCTCCGGGGTGAGTACGCTGGCTCCGCCGGCGCCCGGGAAATGCAGTTCCCTGGACACGGGCGCCGTGCGAGGGTAGCCGGGCGACGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470111.5
ENST00000479150.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCCGGAGGCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSPEAAA
Trigger: CGCGGCCGCCTCCGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459820.5
ENST00000460321.5
ENST00000467604.5
ENST00000475803.5
ENST00000487579.5
ENST00000491906.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCCGGCCGTCGCCCGG +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSPAVAR
Trigger: CCGGGCGACGGCCGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470111.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCGGCAGCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSRQHLV
Trigger: GACGAGGTGCTGCCGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472471.5
ENST00000493932.5
CDS-3UTR CAA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 5 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS TCA 90 bp GCGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAGTGCCACTGCGTaGGTTCCGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AWPASSFMKPQSATA*VPWHIGTQCTRLWA
Trigger: TGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCATAGGCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSHRPLL
Trigger: GAGGAGAGGCCTATGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479308.1
CDS-3UTR CAA 90 bp TCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCC +
Preference number: 5 (lower is better)
Translates to: SGGHHWKAYLGRSSPEGYEFRGT*EHSVPA
Trigger: GGCGGGTACACTGTGTTCCAATGTGCCACGGAACTC...ATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCC +
Preference number: 5 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLEFRGT*EHSVPA
Trigger: GGCGGGTACACTGTGTTCCAATGTGCCACGGAACTC...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCACTGGATGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSLDGCL
Trigger: GAGACAGCCATCCAGTGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460395.5
CDS-3UTR CAA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCGGCCTCTGGACACTTaGGGATTTTCTGCCTGTACC +
Preference number: 5 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLRPLDT*GFSACT
Trigger: GGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCG...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCAGGGGCTTTTTCAGGTaGATGCACCCGGCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ECILWWASLEGIPGQVLPRGFFR*MHPAEK
Trigger: CTTCTCCGCCGGGTGCATCAACCTGAAAAAGCCCCT...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS TCA 90 bp CCTTGGCTTGGGGAGGAAGTGTTGCGTGGCCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTGCGTGAGTTCCGTGGCACATTGGAA +
Preference number: 5 (lower is better)
Translates to: PWLGEEVLRGLPLPS*SHKVPLREFRGTLE
Trigger: TTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS GCA 90 bp TGTTGCGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACATTGGAACACAGTGTACCCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: CCVACLFLHEATKCH*VSSVAHWNTVYPPL
Trigger: CAGAGGCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCCTTTGGAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSPLEKG
Trigger: ACCTTTCTCCAAAGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459778.5
ENST00000483209.5
ENST00000484595.5
CDS CCA 90 bp CGTGGCACATTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCTCCACGCTCAGATTA +
Preference number: 5 (lower is better)
Translates to: RGTLEHSVPASGQEP*KSTHEARWSSTLRL
Trigger: TAATCTGAGCGTGGAGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473887.5
CDS-3UTR CAA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAGCTTGGAGGATTGCTaGAGCCTGAGAGATCGAGGC +
Preference number: 5 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRSLEDC*SLRDRG
Trigger: GCCTCGATCTCTCAGGCTCAAGCAATCCTCCAAGCT...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS GCA 90 bp AGGAAGTGTTGCGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTGGCACATTGGAACACAGTGTACCCG +
Preference number: 5 (lower is better)
Translates to: RKCCVACLFLHEATK*HCVSSVAHWNTVYP
Trigger: CGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 90 bp CTTCATGAAGCCACAAAGTGCCACTGCGTGAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: LHEATKCHCVSSVAH*NTVYPPLGKSRGNP
Trigger: TGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 90 bp GCAGGTACATCAGGTGTTTCTCTCTGTTCCGGTGGGGAACGAGGATaGCGACCCTCTGTAAAGCTTTACATTCCTGAGGGCGATACCGGC +
Preference number: 5 (lower is better)
Translates to: AGTSGVSLCSGGERG*RPSVKLYIPEGDTG
Trigger: GCCGGTATCGCCCTCAGGAATGTAAAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAAACACCTGATGTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000460321.5
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
ENST00000491906.5
CDS-3UTR CAA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRILLLG*GRKCCV
Trigger: CACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTAT...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSSAFTS*PLSLVW
Trigger: CCACACTAGAGACAAAGGCAATGAGGTGAACGCAGA...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSSAFTS*PLSLVW
Trigger: CCACACTAGAGACAAAGGCAATGAGGTGAACGCAGA...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: GYQQLQPAQLLLPLQPTLFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...GAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS GCA 90 bp AAAGTGATACTTCTCCTTGGCTTGGGGAGGAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCCACAAAGTGCCACTGCGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: KVILLLGLGRKCCVA*LFLHEATKCHCVSS
Trigger: GGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS GCA 90 bp CTGCCTCTAAAAGTGATACTTCTCCTTGGCTTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAGTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: LPLKVILLLGLGRKC*VACLFLHEATKCHC
Trigger: GCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTTTAGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS-3UTR CAA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGTGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTA +
Preference number: 5 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPCFRNL*NGTHEV
Trigger: TACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCA...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: ECILWWASLEGIPGQVLPSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGATGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTA +
Preference number: 5 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRCFRNL*NGTHEV
Trigger: TACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCA...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PEGYQQLQPAQLLLPLQPKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...CGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCATCCGTTCTGCGTTCCGGCCTCTGGACACTTaGGGATTTTCTGCCTGTACC +
Preference number: 5 (lower is better)
Translates to: SVLQTRDTWCKSFIRSAFRPLDT*GFSACT
Trigger: GGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCG...GAACGCAGAACGGATGAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS-3UTR CAA 90 bp GCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCGAGAATCCATTCACCTaGAAAAACTGCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: AISSCNQLSYCCLCSRHSENPFT*KNCSLL
Trigger: AAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCTC...GGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCGATATGTACCAACCATaGCTAACTGATCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ECILWWASLEGIPGQVLPDMYQP*LTDPWL
Trigger: CAGCCAAGGATCAGTTAGCAATGGTTGGTACATATC...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAGTTTGTTTGCCCCATaGAAGGTGACAGACATGATA +
Preference number: 5 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSSLFAP*KVTDMI
Trigger: TATCATGTCTGTCACCTTCAATGGGGCAAACAAACT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CAGTGGACTGGGAGGGGCAGATCTACCCTCCATGTGGGTGGGCACCATCTAATCCTACCATTACAAAGTTaGTTTGCCCCATTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QWTGRGRSTLHVGGHHLILPLQS*FAPLKV
Trigger: CACCTTCAATGGGGCAAACAAACTTTGTAATGGTAG...GATTAGATGGTGCCCACCCACATGGAGGGTAGATCTGCCCCTCCCAGTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp ACCCTGAACATCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: TLNIRLQVLQLLDSWTYTILLLG*GRKCCV
Trigger: CACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTAT...GGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGATGTTCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp AGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCACCCTCAATCTGATTGCGAACTaGATGACAACTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: SSCNQLSYCCLCSRHSTLNLIAN*MTTEDT
Trigger: TGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATT...GAGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGAGAATCCATTCACCTaGAAAAACTGCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSAAATSSATAAFAADTPENPFT*KNCSLL
Trigger: AAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCTC...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGAGGAAATTTTCATTCTTaGGAGCTCAACCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LKAISSCNQLSYCCLCSRGNFHS*ELNPES
Trigger: AGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTCC...TCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACTCCAGGAAATTTTCATTCTTaGGAGCTCAACCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LSAAATSSATAAFAADTPGNFHS*ELNPES
Trigger: AGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTCC...TGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCACCTACTTTTGAGGTTTaGGGACCCGGGCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPPTFEV*GPGLAS
Trigger: GGAAGCCAGCCCGGGTCCCAAAACCTCAAAAGTAGG...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS CCA 90 bp AGGACTTACCGTTCTGCGTTCACCTCATTGCCTTTGTCTCTAGTGTaGAAGACCATTGTATATTTACCCACTTCAGGCAGGGGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: RTYRSAFTSLPLSLV*KTIVYLPTSGRGRE
Trigger: TTCCCGGCCCCTGCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp GAACAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: EQLLNPSVLQTRDTWCKSILLLG*GRKCCV
Trigger: CACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTAT...GCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CAA 90 bp ATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGGCTATCAGCAGCTGCCAAGAAAGCTTCAAGTaGAGCTTTTCCAATCTGATT +
Preference number: 5 (lower is better)
Translates to: ITGRHTWAGPPLKAISSCQESFK*SFSNLI
Trigger: AATCAGATTGGAAAAGCTCAACTTGAAGCTTTCTTG...GCAGCTGCTGATAGCCTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCCCACATTCAAGAGTTaGGCTCGATTAAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSPTFKS*ARLNFL
Trigger: TAAAAAGTTTAATCGAGCCAAACTCTTGAATGTGGG...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CCCCTGAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PLKAISSCNQLSYCCLCSNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...GCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTACCTACACCAGTGGTTaGCCAGGGACTCTCGGGCCT +
Preference number: 5 (lower is better)
Translates to: RTTLVLSDIQQSYFLWPFTYTSG*PGTLGP
Trigger: AGGCCCGAGAGTCCCTGGCAAACCACTGGTGTAGGT...AAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CAGTGGACTGGGAGGGGCAGATCTACCCTCCATGTGGGTGGGCACCATCTAATCGTCAACTTGATTGGATaGAAGGATGTGAAGTATTGT +
Preference number: 5 (lower is better)
Translates to: QWTGRGRSTLHVGGHHLIVNLIG*KDVKYC
Trigger: ACAATACTTCACATCCTTCAATCCAATCAAGTTGAC...GATTAGATGGTGCCCACCCACATGGAGGGTAGATCTGCCCCTCCCAGTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACAATACTGAGTGTCAACTaGATTGGATTGAAGGATGTG +
Preference number: 5 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTILSVN*IGLKDV
Trigger: CACATCCTTCAATCCAATCAAGTTGACACTCAGTAT...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: REQLWFSQTFSSLISCGLILLLG*GRKCCV
Trigger: CACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTAT...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCTGAAGAATCTGATTGCGAACTaGATGACAACTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: YSLVGITGRHTWAGPPLKNLIAN*MTTEDT
Trigger: TGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATT...CTTCAGGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACAAGAAAGCTTCAAGTaGAGCTTTTCCAATCTGATT +
Preference number: 5 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTQESFK*SFSNLI
Trigger: AATCAGATTGGAAAAGCTCAACTTGAAGCTTTCTTG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACACGGCCTCTGGACACTTaGGGATTTTCTGCCTGTACC +
Preference number: 5 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTRPLDT*GFSACT
Trigger: GGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCG...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCGGCCTCTGGACACTTaGGGATTTTCTGCCTGTACC +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSRPLDT*GFSACT
Trigger: GGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCG...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACCCACATTCAAGAGTTaGGCTCGATTAAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: EGYQQLQPAQLLLPLQPTPTFKS*ARLNFL
Trigger: TAAAAAGTTTAATCGAGCCAAACTCTTGAATGTGGG...TGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AAGGCTATCAGCAGCTGCAACCAGCTCAGCTACTGCTGCCTTTGCAGCCGACACAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: KAISSCNQLSYCCLCSRHNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...GTGTCGGCTGCAAAGGCAGCAGTAGCTGAGCTGGTTGCAGCTGCTGATAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATCAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 5 (lower is better)
Translates to: WFSQTFSSLISCGLLSHNQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...ATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 5 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GAATGTATTCTCTGGTGGGCATCACTGGAAGGCATACCTGGGCAGGTCCTCCCCACTACCAGGATGCAATaGGAAAAATCCATAATGCAA +
Preference number: 5 (lower is better)
Translates to: ECILWWASLEGIPGQVLPTTRMQ*EKSIMQ
Trigger: TTGCATTATGGATTTTTCCAATTGCATCCTGGTAGT...GGGGAGGACCTGCCCAGGTATGCCTTCCAGTGATGCCCACCAGAGAATACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS GCA 90 bp ACATTCCTGAGGGCGATACCGGCCTCTGGACACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGTGAGATCTGGTTTGAAAATGAGCTT +
Preference number: 5 (lower is better)
Translates to: TFLRAIPASGHFGIF*LYLFQSEIWFENEL
Trigger: AAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCCCTCAGGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000460321.5
ENST00000467604.5
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
ENST00000491906.5
CDS-3UTR CAA 90 bp CAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: QLLNPSVLQTRDTWCKSFFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...GAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSSAFTS*PLSLVW
Trigger: CCACACTAGAGACAAAGGCAATGAGGTGAACGCAGA...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAGCCAGGTGGTCCCCTTaGGAGAAAGGTCAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIIARWSP*EKGQRS
Trigger: CGACCTTTGACCTTTCTCCAAAGGGGACCACCTGGC...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCAAGAGAGGCCATGAGTaGAGAACTGTAGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSKRGHE*RTVDVR
Trigger: CCTCACGTCTACAGTTCTCAACTCATGGCCTCTCTT...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTCCACTGCACTCCAGCTaGGGAGCGAGACCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAPLHSS*GARPCL
Trigger: GAGGCAGGGTCTCGCTCCCAAGCTGGAGTGCAGTGG...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCC +
Preference number: 5 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVEFRGT*EHSVPA
Trigger: GGCGGGTACACTGTGTTCCAATGTGCCACGGAACTC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ACATATGTCTCCACTGCATTTTGCCTTGCCCTGAAATGTGGCAAACATATTTTTGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCC +
Preference number: 5 (lower is better)
Translates to: TYVSTAFCLALKCGKHIFEFRGT*EHSVPA
Trigger: GGCGGGTACACTGTGTTCCAATGTGCCACGGAACTC...AAAAATATGTTTGCCACATTTCAGGGCAAGGCAAAATGCAGTGGAGACATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CAACTACTCAACCCATCTGTTCTCCAGACTCGTGACACTTGGTGTAAGAGCTTCTGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTA +
Preference number: 5 (lower is better)
Translates to: QLLNPSVLQTRDTWCKSFCFRNL*NGTHEV
Trigger: TACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCA...GAAGCTCTTACACCAAGTGTCACGAGTCTGGAGAACAGATGGGTTGAGTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467604.5
ENST00000480814.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGG +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSSAFTS*PLSLVW
Trigger: CCACACTAGAGACAAAGGCAATGAGGTGAACGCAGA...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: REQLWFSQTFSSLISCGLSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCTCGTACCTTTCTACCTaGGACGAGAACAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSSYLST*DENNSG
Trigger: ACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGA...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATACAGCTACTGCTGCCTTaGCAGCCGACACTCCACCCT +
Preference number: 5 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIQLLLP*QPTLHP
Trigger: AGGGTGGAGTGTCGGCTGCAAAGGCAGCAGTAGCTG...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATGTCTCCACTGCATTTaGCCTTGCCCTGAAATGTGG +
Preference number: 5 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPCLHCI*PCPEMW
Trigger: CCACATTTCAGGGCAAGGCAAAATGCAGTGGAGACA...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCATTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SSYLSTLDENNSGSLRHSFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...TGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCGAAGGATGTGAAGTATaGTTCCTGGGTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSEGCEV*FLGVSV
Trigger: CACAGACACACCCAGGAACAATACTTCACATCCTTC...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp AAAAAGGAAAAATTCAGCTCAACAATGAGCTGTAACAGGTTCTTAATGTGTGCTGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCC +
Preference number: 5 (lower is better)
Translates to: KKEKFSSTMSCNRFLMCAEFRGT*EHSVPA
Trigger: GGCGGGTACACTGTGTTCCAATGTGCCACGGAACTC...AGCACACATTAAGAACCTGTTACAGCTCATTGTTGAGCTGAATTTTTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCAGACTCCAAGTTCTTCAGCTTCTGGACTCTTGGACCTACACCAGTGGTTTGCCAAGAAAGCTTCAAGTaGAGCTTTTCCAATCTGATT +
Preference number: 5 (lower is better)
Translates to: SDSKFFSFWTLGPTPVVCQESFK*SFSNLI
Trigger: AATCAGATTGGAAAAGCTCAACTTGAAGCTTTCTTG...GCAAACCACTGGTGTAGGTCCAAGAGTCCAGAAGCTGAAGAACTTGGAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATACGGCCTCTGGACACTTaGGGATTTTCTGCCTGTACC +
Preference number: 5 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIRPLDT*GFSACT
Trigger: GGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCG...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCGAGAATCCATTCACCTaGAAAAACTGCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSENPFT*KNCSLL
Trigger: AAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCTC...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GATGCACAGACGCAAAAGAGCAGGATGCATTTAAAGAAGTCACTAGTGTGGCCAGTGTCTGTGAGGGTGTaGCCAAAGGAAATTAACATT +
Preference number: 5 (lower is better)
Translates to: DAQTQKSRMHLKKSLVWPVSVRV*PKEINI
Trigger: AATGTTAATTTCCTTTGGCAACACCCTCACAGACAC...TGGCCACACTAGTGACTTCTTTAAATGCATCCTGCTCTTTTGCGTCTGTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTTCAGAGAAGTGTTACTaGGGTAGGTGGATAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RKLSCYNCFILYITRSSASEKCY*GRWIGE
Trigger: CTCCCCTATCCACCTACCCAAGTAACACTTCTCTGA...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCTTTGGAGCTCAACCCTaGAAAAACTGCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSFGAQP*KNCSLL
Trigger: AAGCAGAGAGCAGTTTTTCAAGGGTTGAGCTCCAAA...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480814.5
CDS CCA 90 bp AATGGAAGACAGAACATCAAGGGATACAGATCAACAAACACTGGATaGCTGTCTCCGAAGTCTTTTATAATCCAGGTGACCAACCCCTTT +
Preference number: 5 (lower is better)
Translates to: NGRQNIKGYRSTNTG*LSPKSFIIQVTNPF
Trigger: AAAGGGGTTGGTCACCTGGATTATAAAAGACTTCGGAGACAGCCATCCAGTGTTTGTTGATCTGTATCCCTTGATGTTCTGTCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479308.1
CDS CCA 90 bp CAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTaGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QYCIFVPFYLGREQL*FSQTFSSLISCTSS
Trigger: GGAAGAGGTACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471675.1
CDS-3UTR CAA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTG +
Preference number: 5 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIILLLG*GRKCCV
Trigger: CACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTAT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCAAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: TLVLSDIQQSYFLWPFIPKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...TGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QLWFSQTFSSLISCGLLSKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...GGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CGAGAACAACTCTGGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTAATCTGATTGCGAACTaGATGACAACTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: REQLWFSQTFSSLISCGLNLIAN*MTTEDT
Trigger: TGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATT...AAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACCAGAGTTGTTCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTTGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTA +
Preference number: 5 (lower is better)
Translates to: RKLSCYNCFILYITRSSACFRNL*NGTHEV
Trigger: TACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCA...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACATTCAGCCCCACATTCAAGAGTTaGGCTCGATTAAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: FVPFYLGREQLWFSQTFSPTFKS*ARLNFL
Trigger: TAAAAAGTTTAATCGAGCCAAACTCTTGAATGTGGG...GCTGAATGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS TCA 90 bp CTTCAAGTTGAGCTTTTCCAATCTGATTGCGAACTTGATGACAACTaGAGATACAATGCCTGGTTTTTCTCAGTAGTTCTGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: LQVELFQSDCELDDN*RYNAWFFSVVLLQQ
Trigger: CTGTTGGAGCAGAACTACTGAGAAAAACCAGGCATTGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATTGGAAAAGCTCAACTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000473887.5
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
ENST00000493932.5
CDS-3UTR CAA 90 bp TGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTCTCAGACAAATCTGATTGCGAACTaGATGACAACTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: CIFVPFYLGREQLWFSQTNLIAN*MTTEDT
Trigger: TGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATT...TGTCTGAGAGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLRHSAVLFPVAFYPIIYDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...ATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTGGAAATTTTCATTCTTaGGAGCTCAACCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: RKLSCYNCFILYITRSSAGNFHS*ELNPES
Trigger: AGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTCC...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: FSQTFSSLISCGLLSHNIFTSLP*SLVWKT
Trigger: GGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAA...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGACACAGAAGGGCAGTaGTCAAGTTCTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SQTFSSLISCGLLSHNILDTEGQ*SSSTFF
Trigger: GAAGAAGGTAGAACTTGACAACTGCCCTTCTGTGTC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVKVRSG*KMSLLW
Trigger: CCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTT...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000471675.1
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ATAACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTGAGAATCCATTCACCTaGAAAAACTGCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ITVLYLRTFLPWTRTTLVENPFT*KNCSLL
Trigger: AAGCAGAGAGCAGTTTTTCAAGGTGAATGGATTCTC...AACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp AACAGTATTGTATCTTCGTACCTTTCTACCTTGGACGAGAACAACTCTGGTTCTGAAATAGCTATTTTGTaGGAGTGGTTGACTCTACCA +
Preference number: 5 (lower is better)
Translates to: NSIVSSYLSTLDENNSGSEIAIL*EWLTLP
Trigger: TGGTAGAGTCAACCACTCCAACAAAATAGCTATTTC...AGAACCAGAGTTGTTCTCGTCCAAGGTAGAAAGGTACGAAGATACAATACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp AGAAAGCTGTCTTGTTACAACTGTTTTATACTCTACATCACCAGGAGCTCTGCTCAAGAAAGCTTCAAGTaGAGCTTTTCCAATCTGATT +
Preference number: 5 (lower is better)
Translates to: RKLSCYNCFILYITRSSAQESFK*SFSNLI
Trigger: AATCAGATTGGAAAAGCTCAACTTGAAGCTTTCTTG...AGCAGAGCTCCTGGTGATGTAGAGTATAAAACAGTTGTAACAAGACAGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp GGTTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATAAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: GSLRHSAVLFPVAFYPIINVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...TATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp ACATATGTCTCCACTGCATTTTGCCTTGCCCTGAAATGTGGCAAACATATTTTTCCCACATTCAAGAGTTaGGCTCGATTAAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: TYVSTAFCLALKCGKHIFPTFKS*ARLNFL
Trigger: TAAAAAGTTTAATCGAGCCAAACTCTTGAATGTGGG...AAAAATATGTTTGCCACATTTCAGGGCAAGGCAAAATGCAGTGGAGACATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS-3UTR CAA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTAGGAAATTTTCATTCTTaGGAGCTCAACCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: SQTFSSLISCGLLSHNILGNFHS*ELNPES
Trigger: AGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTCC...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TTCTCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATAAATCTGATTGCGAACTaGATGACAACTGAAGATACA +
Preference number: 5 (lower is better)
Translates to: FSQTFSSLISCGLLSHNINLIAN*MTTEDT
Trigger: TGTATCTTCAGTTGTCATCAAGTTCGCAATCAGATT...TATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAACAAGAAAGCTTCAAGTaGAGCTTTTCCAATCTGATT +
Preference number: 5 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKQESFK*SFSNLI
Trigger: AATCAGATTGGAAAAGCTCAACTTGAAGCTTTCTTG...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp CAGGTTCTTAATGTGTGCTACTATTTGAAGTCTCTAGGCCAAAATTATTGCAAAAATGTGTGCTACTATTaGAAGTCTCTAGGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: QVLNVCYYLKSLGQNYCKNVCYY*KSLGQN
Trigger: ATTTTGGCCTAGAGACTTCAAATAGTAGCACACATT...TTTGCAATAATTTTGGCCTAGAGACTTCAAATAGTAGCACACATTAAGAACCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS-3UTR CAA 90 bp TCTCAGACATTCAGCAGTCTTATTTCCTGTGGCCTTTTATCCCATAATATATTATGTTATAAGGAAAGTTaGTCTGTAGGTGGGTACATA +
Preference number: 5 (lower is better)
Translates to: SQTFSSLISCGLLSHNILCYKES*SVGGYI
Trigger: TATGTACCCACCTACAGACAAACTTTCCTTATAACA...TAATATATTATGGGATAAAAGGCCACAGGAAATAAGACTGCTGAATGTCTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS GCA 72 bp CCGGCTACCCTCGCACGGCGCCCGTGTCCAGGGAACTaGATTTCCCGGGCGCCGGCGGAGCCAGCGTACTCA +
Preference number: 6 (lower is better)
Translates to: PATLARRPCPGN*ISRAPAEPAYS
Trigger: TGAGTACGCTGGCTCCGCCGGCGCCCGGGAAATGCAGTTCCCTGGACACGGGCGCCGTGCGAGGGTAGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470111.5
ENST00000479150.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCCCCGGAGGCGGCCGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVPGGGRGE
Trigger: CTCGCCGCGGCCGCCTCCGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459820.5
ENST00000460321.5
ENST00000467604.5
ENST00000475803.5
ENST00000487579.5
ENST00000491906.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCCCCGGCCGTCGCCCGGCTACC +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVPGRRPAT
Trigger: GGTAGCCGGGCGACGGCCGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470111.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCCCGGCAGCACCTCGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVPAAPRLA
Trigger: AGCCAGACGAGGTGCTGCCGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472471.5
ENST00000493932.5
CDS TCA 72 bp GGGGAGGAAGTGTTGCGTGGCCTGCCTCTTCCTTCATaGAGCCACAAAGTGCCACTGCGTGAGTTCCGTGGC +
Preference number: 6 (lower is better)
Translates to: GEEVLRGLPLPS*SHKVPLREFRG
Trigger: GCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCACTGGATGGCTGTCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVTGWLSPK
Trigger: CTTCGGAGACAGCCATCCAGTGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460395.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSPE
Trigger: CTCCGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459820.5
ENST00000460321.5
ENST00000467604.5
ENST00000475803.5
ENST00000487579.5
ENST00000491906.5
CDS CCA 72 bp GCCACAAAGTGCCACTGCGTGAGTTCCGTGGCACATTaGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGT +
Preference number: 6 (lower is better)
Translates to: ATKCHCVSSVAH*NTVYPPLGKSR
Trigger: ACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSRQ
Trigger: CTGCCGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472471.5
ENST00000493932.5
CDS CAA 72 bp AGCCACAAAGTGCCACTGCGTGAGTTCCGTGGCACATaGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCG +
Preference number: 6 (lower is better)
Translates to: SHKVPLREFRGT*EHSVPASGQEP
Trigger: CGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSST
Trigger: CGTGGAGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473887.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCCCCTTTGGAGAAAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVPFGERSK
Trigger: CTTTGACCTTTCTCCAAAGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459778.5
ENST00000483209.5
ENST00000484595.5
CDS TCA 72 bp ACCCGCCTCTGGGCAAGAGCCGTGGAAATCCACACATaGAGCCAGGTGGTCCTCCACGCTCAGATTACCATT +
Preference number: 6 (lower is better)
Translates to: TRLWARAVEIHT*SQVVLHAQITI
Trigger: AATGGTAATCTGAGCGTGGAGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473887.5
CDS GCA 72 bp CTTCTCCTTGGCTTGGGGAGGAAGTGTTGCGTGGCCTaGCTCTTCCTTCATGAAGCCACAAAGTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: LLLGLGRKCCVA*LFLHEATKCHC
Trigger: GCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCCTTTG +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSPL
Trigger: CAAAGGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459778.5
ENST00000483209.5
ENST00000484595.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCCCATAGG +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSHR
Trigger: CCTATGGGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479308.1
CDS CAA 90 bp CTGCCTTCCGCTCCTCTGCCTCTAAAAGTGATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTGGCCTGCCTCTTCCTTCATGAAGCC +
Preference number: 6 (lower is better)
Translates to: LPSAPLPLKVILLLG*GRKCCVACLFLHEA
Trigger: GGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTTTAGAGGCAGAGGAGCGGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS TCA 72 bp GCCTCTTCCTTCATGAAGCCACAAAGTGCCACTGCGTaGGTTCCGTGGCACATTGGAACACAGTGTACCCGC +
Preference number: 6 (lower is better)
Translates to: ASSFMKPQSATA*VPWHIGTQCTR
Trigger: GCGGGTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS GCA 72 bp TGCGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAGTaGCACTGCGTGAGTTCCGTGGCACATTGGAACACA +
Preference number: 6 (lower is better)
Translates to: CVACLFLHEATK*HCVSSVAHWNT
Trigger: TGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp TTGGAACACAGTGTACCCGCCTCTGGGCAAGAGCCGTaGAAATCCACACATGAAGCCAGGTGGTCACTGGAT +
Preference number: 6 (lower is better)
Translates to: LEHSVPASGQEP*KSTHEARWSLD
Trigger: ATCCAGTGACCACCTGGCTTCATGTGTGGATTTCCACGGCTCTTGCCCAGAGGCGGGTACACTGTGTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460395.5
CDS GCA 72 bp GCCTGCCTCTTCCTTCATGAAGCCACAAAGTGCCACTaGGTGAGTTCCGTGGCACATTGGAACACAGTGTAC +
Preference number: 6 (lower is better)
Translates to: ACLFLHEATKCH*VSSVAHWNTVY
Trigger: GTACACTGTGTTCCAATGTGCCACGGAACTCACGCAGTGGCACTTTGTGGCTTCATGAAGGAAGAGGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp TTCCGCTCCTCTGCCTCTAAAAGTGATACTTCTCCTTaGCTTGGGGAGGAAGTGTTGCGTGGCCTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: FRSSASKSDTSP*LGEEVLRGLPL
Trigger: AAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTTTAGAGGCAGAGGAGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CAA 72 bp GCTCCTCTGCCTCTAAAAGTGATACTTCTCCTTGGCTaGGGGAGGAAGTGTTGCGTGGCCTGCCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: APLPLKVILLLG*GRKCCVACLFL
Trigger: AAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTTTAGAGGCAGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS GCA 72 bp ATCCACTGTAACGTAACCTGTACCCAGTGCTGTTCCTaGCAACCACCAGATGCTTGGGATGCTCCTCACACT +
Preference number: 6 (lower is better)
Translates to: IHCNVTCTQCCS*QPPDAWDAPHT
Trigger: AGTGTGAGGAGCATCCCAAGCATCTGGTGGTTGGCAGGAACAGCACTGGGTACAGGTTACGTTACAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000460321.5
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
CDS CCA 72 bp TCCAGCAGGTACATCAGGTGTTTCTCTCTGTTCCGGTaGGGAACGAGGATGGCGACCCTCTGTAAAGCTTTA +
Preference number: 6 (lower is better)
Translates to: SSRYIRCFSLFR*GTRMATLCKAL
Trigger: TAAAGCTTTACAGAGGGTCGCCATCCTCGTTCCCCACCGGAACAGAGAGAAACACCTGATGTACCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000460321.5
ENST00000467604.5
ENST00000480814.5
ENST00000483209.5
ENST00000491906.5
CDS CAA 72 bp ACCCACTTCAGGCAGGGGCCGGGAAATTTTCATTCTTaGGAGCTCAACCCTGAGTCTGAGGTCATCGTCTTC +
Preference number: 6 (lower is better)
Translates to: THFRQGPGNFHS*ELNPESEVIVF
Trigger: GAAGACGATGACCTCAGACTCAGGGTTGAGCTCCAAAGAATGAAAATTTCCCGGCCCCTGCCTGAAGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000483209.5
CDS GCA 72 bp AAAGTGATACTTCTCCTTGGCTTGGGGAGGAAGTGTTaGGTGGCCTGCCTCTTCCTTCATGAAGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: KVILLLGLGRKC*VACLFLHEATK
Trigger: CTTTGTGGCTTCATGAAGGAAGAGGCAGGCCACGCAACACTTCCTCCCCAAGCCAAGGAGAAGTATCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000459778.5
ENST00000459820.5
ENST00000460321.5
ENST00000460395.5
ENST00000467604.5
ENST00000470111.5
ENST00000472471.5
ENST00000473887.5
ENST00000475803.5
ENST00000479308.1
ENST00000480814.5
ENST00000483209.5
ENST00000484595.5
ENST00000487579.5
ENST00000491906.5
ENST00000493932.5
CDS CCA 72 bp GAATCTCTTGAATGGCACCCACGAAGTAGTTACTGGTaGCCCACCCAACCACTGTCAGGCACAAAGTCAACA +
Preference number: 6 (lower is better)
Translates to: ESLEWHPRSSYW*PTQPLSGTKST
Trigger: TGTTGACTTTGTGCCTGACAGTGGTTGGGTGGGCCACCAGTAACTACTTCGTGGGTGCCATTCAAGAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000470111.5
ENST00000471675.1
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
ENST00000493932.5
CDS GCA 72 bp AGGGCGATACCGGCCTCTGGACACTTTGGGATTTTCTaGCTGTACCTCTTCCAAAGTGAGATCTGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: RAIPASGHFGIF*LYLFQSEIWFE
Trigger: TTCAAACCAGATCTCACTTTGGAAGAGGTACAGGCAGAAAATCCCAAAGTGTCCAGAGGCCGGTATCGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000460321.5
ENST00000467604.5
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
ENST00000491906.5
CDS CAA 90 bp GCAGGTGAAGCCAGGACTTACCGTTCTGCGTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACCATTGTATATTTACCCACTTCAGGC +
Preference number: 6 (lower is better)
Translates to: AGEARTYRSAFTSLP*SLVWKTIVYLPTSG
Trigger: GCCTGAAGTGGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGTAAGTCCTGGCTTCACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS CAA 90 bp GGTCTTATGGAAATTAGCCATGAACTCCTTTGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTAGTTACTGGTGGCCCACCCAACCAC +
Preference number: 6 (lower is better)
Translates to: GLMEISHELLCFRNL*NGTHEVVTGGPPNH
Trigger: GTGGTTGGGTGGGCCACCAGTAACTACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCTAATTTCCATAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000470111.5
ENST00000471675.1
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
CDS CAA 72 bp GCCAGGACTTACCGTTCTGCGTTCACCTCATTGCCTTaGTCTCTAGTGTGGAAGACCATTGTATATTTACCC +
Preference number: 6 (lower is better)
Translates to: ARTYRSAFTSLP*SLVWKTIVYLP
Trigger: GGGTAAATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGTAAGTCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS CAA 72 bp GGTGAAGCCAGGACTTACCGTTCTGCGTTCACCTCATaGCCTTTGTCTCTAGTGTGGAAGACCATTGTATAT +
Preference number: 6 (lower is better)
Translates to: GEARTYRSAFTS*PLSLVWKTIVY
Trigger: ATATACAATGGTCTTCCACACTAGAGACAAAGGCAATGAGGTGAACGCAGAACGGTAAGTCCTGGCTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467604.5
CDS CAA 72 bp TTTTCTGCCTGTACCTCTTCCAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGGCCTCCTGAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: FSACTSSKVRSG*KMSLLWPPESP
Trigger: AGGACTCTCAGGAGGCCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGTACAGGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491906.5
CDS CAA 90 bp TCTGCCTGTACCTCTTCCAAAGTGAGATCTGGTTTGAAAATGAGCTaGCTCTGGCCTCCTGAGAGTCCTTTCTTTCTCTCTACTTTTGTG +
Preference number: 6 (lower is better)
Translates to: SACTSSKVRSGLKMS*LWPPESPFFLSTFV
Trigger: CACAAAAGTAGAGAGAAAGAAAGGACTCTCAGGAGGCCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGTACAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491906.5
CDS CAA 72 bp GAAATTAGCCATGAACTCCTTTGCTTTAGGAATCTCTaGAATGGCACCCACGAAGTAGTTACTGGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: EISHELLCFRNL*NGTHEVVTGGP
Trigger: TGGGCCACCAGTAACTACTTCGTGGGTGCCATTCAAGAGATTCCTAAAGCAAAGGAGTTCATGGCTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359213.7
ENST00000393765.7
ENST00000467604.5
ENST00000470111.5
ENST00000471675.1
ENST00000475803.5
ENST00000479150.5
ENST00000480814.5
ENST00000483209.5
CDS CAA 72 bp ACCTCTTCCAAAGTGAGATCTGGTTTGAAAATGAGCTaGCTCTGGCCTCCTGAGAGTCCTTTCTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: TSSKVRSGLKMS*LWPPESPFFLS
Trigger: AGAGAGAAAGAAAGGACTCTCAGGAGGCCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491906.5
CDS CCA 72 bp CAGAACATCAAGGGATACAGATCAACAAACACTGGATaGCTGTCTCCGAAGTCTTTTATAATCCAGGTGACC +
Preference number: 6 (lower is better)
Translates to: QNIKGYRSTNTG*LSPKSFIIQVT
Trigger: GGTCACCTGGATTATAAAAGACTTCGGAGACAGCCATCCAGTGTTTGTTGATCTGTATCCCTTGATGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479308.1
CDS CAA 72 bp ACCTCTTCCAAAGTGAGATCTGGTTTGAAAATGAGCTaGCTCTGGCCTCCTTTAACAAATGGCACTTTTGGT +
Preference number: 6 (lower is better)
Translates to: TSSKVRSGLKMS*LWPPLTNGTFG
Trigger: ACCAAAAGTGCCATTTGTTAAAGGAGGCCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460321.5
CDS CCA 72 bp AAGACAGAACATCAAGGGATACAGATCAACAAACACTaGATGGCTGTCTCCGAAGTCTTTTATAATCCAGGT +
Preference number: 6 (lower is better)
Translates to: KTEHQGIQINKH*MAVSEVFYNPG
Trigger: ACCTGGATTATAAAAGACTTCGGAGACAGCCATCCAGTGTTTGTTGATCTGTATCCCTTGATGTTCTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479308.1
CDS CAA 72 bp TTTTCTGCCTGTACCTCTTCCAAAGTGAGATCTGGTTaGAAAATGAGCTTGCTCTGGCCTCCTTTAACAAAT +
Preference number: 6 (lower is better)
Translates to: FSACTSSKVRSG*KMSLLWPPLTN
Trigger: ATTTGTTAAAGGAGGCCAGAGCAAGCTCATTTTCAAACCAGATCTCACTTTGGAAGAGGTACAGGCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460321.5