RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B4GALT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000117411

Ensembl transcript IDs: ENST00000309519.8, ENST00000356836.10, ENST00000372324.6, ENST00000434555.7, ENST00000481924.2, ENST00000485678.6, ENST00000497866.6, ENST00000498543.1

Found 707 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCCACAGGAGCTGTGCCCAGCACCCATTAGCTCGTGTCCTATCTaGCCCGGCAGGGGTCCCACAGGTGCACAAGTGAGGTCTTCGAGG +
Preference number: 1 (lower is better)
Translates to: GPQELCPAPISSCPI*PGRGPTGAQVRSSR
Trigger: CCTCGAAGACCTCACTTGTGCACCTGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCTAATGGGTGCTGGGCACAGCTCCTGTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 90 bp TCAGACAGGGAGGCGGGAACCAGACTTACTGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAACCCCAAGATCCCAGGCAGCGACAC +
Preference number: 1 (lower is better)
Translates to: SDREAGTRLTDPSPT*LPCKGQPQDPRQRH
Trigger: GTGTCGCTGCCTGGGATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR CCA 90 bp AGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCAGG +
Preference number: 1 (lower is better)
Translates to: SRKPNLSMAMAKWRG*SPQRYRLRSSMGTR
Trigger: CCTGGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 90 bp AAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTaGCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCA +
Preference number: 1 (lower is better)
Translates to: KTEPSLSPGGPPQSS*QPGCGQSSGRQSSA
Trigger: TGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR GCA 90 bp CCTTGGACTCCATCGATTCCTTCAGGCCGGGCTGACTTTCTCTCCTaGTCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTC +
Preference number: 1 (lower is better)
Translates to: PWTPSIPSGRADFLS*STQRLCQAFAFLKL
Trigger: GAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGAGCAGGAGAGAAAGTCAGCCCGGCCTGAAGGAATCGATGGAGTCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 90 bp AGGTCCTCCACAGAGCAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCA +
Preference number: 1 (lower is better)
Translates to: RSSTEQLPARLWSVL*QAIFGTESLCPLVS
Trigger: TGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTGCTCTGTGGAGGACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp TACCACTATGCTCCCTTGGACTCCATCGATTCCTTCAGGCCGGGCTaGCTTTCTCTCCTGCTCCACCCAGCGGCTATGCCAGGCTTTCGC +
Preference number: 1 (lower is better)
Translates to: YHYAPLDSIDSFRPG*LSLLLHPAAMPGFR
Trigger: GCGAAAGCCTGGCATAGCCGCTGGGTGGAGCAGGAGAGAAAGTCAGCCCGGCCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 90 bp GACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCG +
Preference number: 1 (lower is better)
Translates to: DGGRPMSTVILVKSG*RDTSKTWYRTDPMP
Trigger: CGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 90 bp ACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTCCCCAGATaGCCTGAAGCCCCTCTCCTCTTGGTCTCTTACCTGTTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: TKAPGVYCGAPLLPR*PEAPLLLVSYLFPA
Trigger: AGCAGGAAACAGGTAAGAGACCAAGAGGAGAGGGGCTTCAGGGCATCTGGGGAGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 90 bp AGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGT +
Preference number: 1 (lower is better)
Translates to: SSQHREAGSQTCPWQ*QSGGVGRRSGIGCG
Trigger: ACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp TTCTCTCCTGCTCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTaGAGCTCAAACAGTGTGCCTTCTAAACACAAACCCCACCCCGCC +
Preference number: 1 (lower is better)
Translates to: FSPAPPSGYARLSPS*SSNSVPSKHKPHPA
Trigger: GGCGGGGTGGGGTTTGTGTTTAGAAGGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGAGCAGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 90 bp CCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTaGCTTCTAAACACAAACCCCACCCCGCCTCTCCCTTCTTCAGGT +
Preference number: 1 (lower is better)
Translates to: PAAMPGFRLPEAQTV*LLNTNPTPPLPSSG
Trigger: ACCTGAAGAAGGGAGAGGCGGGGTGGGGTTTGTGTTTAGAAGGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 90 bp GGTGCCAGCAGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTaGCACTGGGAGTCACCTTTTTGGAGTCAAGGATGCTTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: GASSPEGPWITSGNQ*HWESPFWSQGCLEV
Trigger: GACCTCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 90 bp GTCGTGCTTGATCATGCGGTAGCGGCCGATTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAGGGAGATCCGGTTGAAGATGTCATC +
Preference number: 1 (lower is better)
Translates to: VVLDHAVAADSDVWA*DLHPSQGDPVEDVI
Trigger: GATGACATCTTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCCAGACATCCGAATCGGCCGCTACCGCATGATCAAGCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp GGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAAT +
Preference number: 1 (lower is better)
Translates to: GEEWLPRHLQDLVPH*PNAVPLHGQLRVLN
Trigger: ATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp AGCCAGACATGTGTAATTGATGGTGGCACTCAGGCAGGCTACTCCTaGAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTC +
Preference number: 1 (lower is better)
Translates to: SQTCVIDGGTQAGYS*NRTKAPGVYCGAPL
Trigger: GAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGCCACCATCAATTACACATGTCTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 90 bp GTTCTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTaGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGC +
Preference number: 1 (lower is better)
Translates to: VLKLPGVARGPSEDP*KTEPSLSPGGPPQS
Trigger: GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR CCA 90 bp ACTGTGATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTaGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCTTC +
Preference number: 1 (lower is better)
Translates to: TVILVKSGCRDTSKT*YRTDPMPSRFMVSF
Trigger: GAAGCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp ATTGGGGAAGCCATTGATTCTCAGAAACTGAGCCTTACTCAGGCCTaGCACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAA +
Preference number: 1 (lower is better)
Translates to: IGEAIDSQKLSLTQA*HTSKVASIGKPEAK
Trigger: TTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCCTGAGTAAGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 90 bp TCTTGCTATCTTGCCACATCTACAACCAAGCCAGACATGTGTAATTaGTGGTGGCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGC +
Preference number: 1 (lower is better)
Translates to: SCYLATSTTKPDMCN*WWHSGRLLLKQDQG
Trigger: GCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGCCACCATCAATTACACATGTCTGGCTTGGTTGTAGATGTGGCAAGATAGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 90 bp AAACTTTCTGGGGGTGGCAGACCCAGAGTAGTCATACCCAATCCATaGATCCAACATTCACAGAGTTCTTTAAGCCAGAAACTTCTTGCT +
Preference number: 1 (lower is better)
Translates to: KLSGGGRPRVVIPNP*IQHSQSSLSQKLLA
Trigger: AGCAAGAAGTTTCTGGCTTAAAGAACTCTGTGAATGTTGGATTCATGGATTGGGTATGACTACTCTGGGTCTGCCACCCCCAGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 90 bp GAATGCAATCTACTCAATGACTATTTAGGCCCTGACATTAAATTCTaGTCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTG +
Preference number: 1 (lower is better)
Translates to: ECNLLNDYLGPDIKF*SPLGIRPEVRDIGL
Trigger: CAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGACCAGAATTTAATGTCAGGGCCTAAATAGTCATTGAGTAGATTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 90 bp CTCGGTATGTATCATACATGTTCACATTCCAGAATCTTCCAGATATaGTTCTCCTTATCCAGGCTGGCTTCCTCTATTAGCCTGGGGAAT +
Preference number: 1 (lower is better)
Translates to: LGMYHTCSHSRIFQI*FSLSRLASSISLGN
Trigger: ATTCCCCAGGCTAATAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATACATACCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWRPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR TCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGAC +
Preference number: 2 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWAAWPG*RCPHHD
Trigger: GTCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485678.6
3UTR-3UTR GCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 2 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CAA 90 bp CCCCGAGGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGC +
Preference number: 2 (lower is better)
Translates to: PRGGHDGGRPMSTVI*VKSGCRDTSKTWYR
Trigger: GCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCCTCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCRPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp GGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 2 (lower is better)
Translates to: GNLRHREPLSISVSPEGAGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...GGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp GTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VAETPPRPGTALTQCRPAKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...AGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 2 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 2 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 2 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR GCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 2 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 2 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR TCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGGGAACCAGACTTACTaGTCCAAGCCCCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRGNQTY*SKPHLP
Trigger: AGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 2 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497866.6
3UTR-3UTR CCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGTTGGAGGTCCCCCACTaGGGGATCAGGGATTGGGCC +
Preference number: 2 (lower is better)
Translates to: ALRQATPETGPRLLACTVLEVPH*GIRDWA
Trigger: GGCCCAATCCCTGATCCCCCAGTGGGGGACCTCCAA...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCGGGTGCCAGCAGTCCTaGGGGGCCTTGGATCACATC +
Preference number: 2 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVGCQQS*GALDHI
Trigger: GATGTGATCCAAGGCCCCTCAGGACTGCTGGCACCC...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497866.6
3UTR-3UTR GCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 2 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTTTCCACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAAGCTCGTGTCCTATCTaGCCCGGCAGGGGTCCCACA +
Preference number: 2 (lower is better)
Translates to: LSTPPSHTAQVPFVRSTGSSCPI*PGRGPT
Trigger: TGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCT...TCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGTCCACCCAGCGGCTATaGCAGGCTTTCGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: ALRQATPETGPRLLACTVSTQRL*QAFAFL
Trigger: CAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 2 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 2 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: NLRHREPLSISVSPEGATAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp GTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: VAETPPRPGTALTQCRPAAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...AGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: QLPARLWSVLWQAIFGTESQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCAGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 2 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CAA 90 bp ATGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACCAGGTCCACATCGCTGAAGATGAAG +
Preference number: 2 (lower is better)
Translates to: MAMAKWRGWSPQRYR*RSSMGTRSTSLKMK
Trigger: CTTCATCTTCAGCGATGTGGACCTGGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CAA 90 bp GGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCCCCTTaGTCAGGTCCACAGGAGCTGTGCCCAGCACCCATTAGCTCGTGT +
Preference number: 2 (lower is better)
Translates to: GTVFPHPLPILLRSP*SGPQELCPAPISSC
Trigger: ACACGAGCTAATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGGGAACCAGACTTACTaGTCCAAGCCCCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCGNQTY*SKPHLP
Trigger: AGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR TCA 90 bp GTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 2 (lower is better)
Translates to: VAETPPRPGTALTQCRPASGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...AGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTERPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR GCA 90 bp CATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGCCCAGCACCCATCAGGGGTCCCACAGGTaGACAAGTGAGGTCTTCGAG +
Preference number: 2 (lower is better)
Translates to: HTAQVPFVRSTGAVPSTHQGSHR*TSEVFE
Trigger: CTCGAAGACCTCACTTGTGCACCTGTGGGACCCCTG...ATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp CCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGCGGTAAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: PLRVRFVMLVAVVLDHAVRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...TACCGCATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 2 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp AGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCTGGGGGATCAGGGATTaGGCCACTTGGGGTCAAGAG +
Preference number: 2 (lower is better)
Translates to: RQATPETGPRLLACTVELWGIRD*ATWGQE
Trigger: CTCTTGACCCCAAGTGGCCCAATCCCTGATCCCCCA...GAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 2 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGACGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RRRPPNVHCDIGEEWLPRRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...TCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 2 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTERQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGGGATATTGGGAAGTTaGCTCTGGGGAGTAAGGGGT +
Preference number: 2 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLGILGS*LWGVRG
Trigger: ACCCCTTACTCCCCAGAGGCAACTTCCCAATATCCC...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGTAGAAAAACCCTCCTaGTCAAGCTGGGGACACAGC +
Preference number: 2 (lower is better)
Translates to: ALRQATPETGPRLLACTVVEKPS*SSWGHS
Trigger: GCTGTGTCCCCAGCTTGAGCAGGAGGGTTTTTCTAC...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTELPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 2 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 2 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGAPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 2 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCTGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCCRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCAAGAGTTGGGGATATTaGGAAGTTGCCTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: STQRLCQAFAFLKLKQCAKSWGY*EVASGE
Trigger: CTCCCCAGAGGCAACTTCCCAATATCCCCAACTCTT...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTAGGGATTGGGCCACTTaGGGTCAAGAGTTGGGGATA +
Preference number: 2 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPRDWAT*GQELGI
Trigger: TATCCCCAACTCTTGACCCCAAGTGGCCCAATCCCT...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp ACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGGGGAATCAGTGGCACTaGGAGTCACCTTTTTGGAGT +
Preference number: 2 (lower is better)
Translates to: TPPSHTAQVPFVRSTGAVGNQWH*ESPFWS
Trigger: ACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCC...CACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCAACTGCCTTTTTCCATaGCTATCTCCCTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: STQRLCQAFAFLKLKQCANCLFP*LSPCLE
Trigger: TTCCAGGCAGGGAGATAGTCATGGAAAAAGGCAGTT...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCGGTATTCAAGACCCCTaGCATGTACATGGTGAAAGG +
Preference number: 2 (lower is better)
Translates to: STQRLCQAFAFLKLKQCAGIQDP*HVHGER
Trigger: CCTTTCACCATGTACATGTCAGGGGTCTTGAATACC...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGACCCCCTTCCCATACTaGTCAGGTCCCCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLTPFPY*SGPLCQ
Trigger: CTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGT...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTELWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 2 (lower is better)
Translates to: LGARGFPRAENSPWKRHCDIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAATCAATTTCAGAGGGGTaGGCACTGTCTTTCCACACC +
Preference number: 2 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPESISEG*ALSFHT
Trigger: GGTGTGGAAAGACAGTGCCCACCCCTCTGAAATTGA...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGACCACTATGCTCCCTTaGACTCCATCGATTCCTTCA +
Preference number: 2 (lower is better)
Translates to: ALRQATPETGPRLLACTVTTMLP*TPSIPS
Trigger: TGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGT...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 2 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGCGGTATCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 2 (lower is better)
Translates to: PLRVRFVMLVAVVLDHAVSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...TACCGCATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 2 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CAA 90 bp GACTATCTCCCTGCCTGGAATGAACTTCGTAAGGGAAAGCACGGATaGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAAAGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: DYLPAWNELRKGKHG*GVTTLGLPPPESLA
Trigger: TGCTAAACTTTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACGAAGTTCATTCCAGGCAGGGAGATAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGCCTGACATTAAATTCTaGTCACCTCTAGGAATCAGG +
Preference number: 2 (lower is better)
Translates to: ALRQATPETGPRLLACTVPDIKF*SPLGIR
Trigger: CCTGATTCCTAGAGGTGACCAGAATTTAATGTCAGG...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp AAATGTGGCTACCTCCTAAGAGATACATCCACCTCCTTCAATTTCAGAGGGGTGCCACAGGTGCACAAGTaGGGTCTTCGAGGGCACCAA +
Preference number: 2 (lower is better)
Translates to: KCGYLLRDTSTSFNFRGVPQVHK*GLRGHQ
Trigger: TTGGTGCCCTCGAAGACCTCACTTGTGCACCTGTGG...CACCCCTCTGAAATTGAAGGAGGTGGATGTATCTCTTAGGAGGTAGCCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTCTGACATGTACATGGTaGAAGGGCAACAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPLTCTW*KGNRRK
Trigger: TTTTCTTCTGTTGCCCTTTCACCATGTACATGTCAG...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR GCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCCACACAAGTTTCTGTaGAATGTACAAACACAAGCC +
Preference number: 2 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPPHKFL*NVQTQA
Trigger: GGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCAAGTCCTGAGGGGCCTTaGATCACATCAGGGAATCAG +
Preference number: 2 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPSPEGP*ITSGNQ
Trigger: CTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACT...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CCA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR TCA 90 bp CTTGGTAAACCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 2 (lower is better)
Translates to: LGKPLRVRFVMLVAVVLDHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...ATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGGTTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR GCA 90 bp ATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTATTATTTTGGAGTCAAGGATaGTTGGAGGTCCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: IPESSRYDSPYPGWLPLLFWSQG*LEVPHW
Trigger: CCAGTGGGGGACCTCCAAGCATCCTTGACTCCAAAA...TAATAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp TGTATCATACATGTTCACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGAGTCAAGGATGCTTaGAGGTCCCCCACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: CIIHVHIPESSRYDSPYPGVKDA*RSPTGG
Trigger: TCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCC...TGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp CACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTATGGGAGTCACCTTTTTaGAGTCAAGGATGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: HIPESSRYDSPYPGWLPLWESPF*SQGCLE
Trigger: CTCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCA...TAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CCA 90 bp TGTATCATACATGTTCACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAACATCAGGGAATCAGTaGCACTGGGAGTCACCTTTT +
Preference number: 2 (lower is better)
Translates to: CIIHVHIPESSRYDSPYPTSGNQ*HWESPF
Trigger: AAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGT...TGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 72 bp CCTAGCCCAGGCCACTCTGCGAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGACTGGGGCTGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: PSPGHSARQCRG*PDPDSDWGWAR
Trigger: CCTAGCCCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTGGCCTGGGCTAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR GCA 72 bp GAGCTGTGCCCAGCACCCATTAGCTCGTGTCCTATCTaGCCCGGCAGGGGTCCCACAGGTGCACAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: ELCPAPISSCPI*PGRGPTGAQVR
Trigger: CCTCACTTGTGCACCTGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCTAATGGGTGCTGGGCACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp ACAGAGCAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: TEQLPARLWSVL*QAIFGTESLCP
Trigger: TGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTGCTCTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 3 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTCCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 3 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 72 bp GAGGCGGGAACCAGACTTACTGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAACCCCAAGATCCCAGG +
Preference number: 3 (lower is better)
Translates to: EAGTRLTDPSPT*LPCKGQPQDPR
Trigger: CCTGGGATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR GCA 72 bp CTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTaGCCAGCACCCATTAGCTCGTGTCCTATCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LLRSPLSGPQEL*PAPISSCPICP
Trigger: GGGGCAGATAGGACACGAGCTAATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 72 bp CCATCGATTCCTTCAGGCCGGGCTGACTTTCTCTCCTaGTCCACCCAGCGGCTATGCCAGGCTTTCGCCTTC +
Preference number: 3 (lower is better)
Translates to: PSIPSGRADFLS*STQRLCQAFAF
Trigger: GAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGAGCAGGAGAGAAAGTCAGCCCGGCCTGAAGGAATCGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 72 bp CCTGGCGTGTACTGTGGAGCTCCACTCCTCCCCAGATaGCCTGAAGCCCCTCTCCTCTTGGTCTCTTACCTG +
Preference number: 3 (lower is better)
Translates to: PGVYCGAPLLPR*PEAPLLLVSYL
Trigger: CAGGTAAGAGACCAAGAGGAGAGGGGCTTCAGGGCATCTGGGGAGGAGTGGAGCTCCACAGTACACGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 72 bp AGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGG +
Preference number: 3 (lower is better)
Translates to: SRKPNLSMAMAK*RGWSPQRYRLR
Trigger: CCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGC +
Preference number: 3 (lower is better)
Translates to: SQHREAGSQTCP*QWQSGGVGRRS
Trigger: GCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 3 (lower is better)
Translates to: QLPARLWSVLWQAIFGTESRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGCTGGGGGATCAGGGATaGGGCCACTTGGGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: ALRQATPETGPRLLACTVLGDQG*GHLGSR
Trigger: TCTTGACCCCAAGTGGCCCAATCCCTGATCCCCCAG...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 72 bp TGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTTCATGGTCAGCTTCGT +
Preference number: 3 (lower is better)
Translates to: WLPRHLQDLVPH*PNAVPLHGQLR
Trigger: ACGAAGCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 72 bp GGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTaGTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: GWALSFHTPFPY*SGPLCQVHRSC
Trigger: ACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 3 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CAA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCAAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 3 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 3 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 3 (lower is better)
Translates to: VAETPPRPGTALTQCRPAVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...AGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 3 (lower is better)
Translates to: NLRHREPLSISVSPEGATIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 3 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497866.6
3UTR-3UTR CAA 90 bp TCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGGGATATTGGGAAGTaGCCTCTGGGGAGTAAGGGG +
Preference number: 3 (lower is better)
Translates to: SRNQARGQRYWAEAGLGVGDIGK*PLGSKG
Trigger: CCCCTTACTCCCCAGAGGCAACTTCCCAATATCCCC...AACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 72 bp TTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCCACCCTTCCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: FPRAENSPWKRH*PLDIPPTLPGP
Trigger: AGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp CCAAACTTGTCCATGGCAATGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATG +
Preference number: 3 (lower is better)
Translates to: PNLSMAMAKWRG*SPQRYRLRSSM
Trigger: CATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp CATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATA +
Preference number: 3 (lower is better)
Translates to: HREAGSQTCPWQ*QSGGVGRRSGI
Trigger: TATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp TTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTaGTACCGCACTGACCCAATGCCGTCCCGCTTCATG +
Preference number: 3 (lower is better)
Translates to: LVKSGCRDTSKT*YRTDPMPSRFM
Trigger: CATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp ACAACGATCAGGGGTGCCAGCAGTCCTGAGGGGCCTTaGATCACATCAGGGAATCAGTGGCACTGGGAGTCA +
Preference number: 3 (lower is better)
Translates to: TTIRGASSPEGP*ITSGNQWHWES
Trigger: TGACTCCCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACCCCTGATCGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 72 bp ACCTCCATCCCCAGGCCCTGTACCACTATGCTCCCTTaGACTCCATCGATTCCTTCAGGCCGGGCTGACTTT +
Preference number: 3 (lower is better)
Translates to: TSIPRPCTTMLP*TPSIPSGRADF
Trigger: AAAGTCAGCCCGGCCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCCTGGGGATGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
3UTR-3UTR CAA 90 bp GAAACTGAGCCTTACTCAGGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAACCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 3 (lower is better)
Translates to: ETEPYSGLTHLQSSQHREPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...TTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCCTGAGTAAGGCTCAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GGGCGTGAGATCTTCATCCCAGTCAGGGAGATCCGGTTGAAGATGTCATCATCCAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 3 (lower is better)
Translates to: GREIFIPVREIRLKMSSSSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...GGATGATGACATCTTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497866.6
3UTR TCA 72 bp GATCATGCGGTAGCGGCCGATTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAGGGAGATCCGGTTGAA +
Preference number: 3 (lower is better)
Translates to: DHAVAADSDVWA*DLHPSQGDPVE
Trigger: TTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCCAGACATCCGAATCGGCCGCTACCGCATGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp CTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTaGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: LPGVARGPSEDP*KTEPSLSPGGP
Trigger: AGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp AGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAAGACCTGGTACCGCAC +
Preference number: 3 (lower is better)
Translates to: RPPNVHCDIGEE*LPRHLQDLVPH
Trigger: GTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR CCA 72 bp ACATCAGGGAATCAGTGGCACTGGGAGTCACCTTTTTaGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGGG +
Preference number: 3 (lower is better)
Translates to: TSGNQWHWESPF*SQGCLEVPHWG
Trigger: CCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCATTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 3 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 3 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
3UTR-3UTR CAA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCCAAGAGTTGGGGATATaGGGAAGTTGCCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVQELGI*GSCLWG
Trigger: TCCCCAGAGGCAACTTCCCAATATCCCCAACTCTTG...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGCTGGGAGTCACCTTTTaGGAGTCAAGGATGCTTGGA +
Preference number: 3 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLLGVTF*ESRMLG
Trigger: TCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCAG...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR GCA 72 bp GAGACACCTCCAAGACCTGGTACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAA +
Preference number: 3 (lower is better)
Translates to: ETPPRPGTALTQ*RPASWSASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 72 bp CGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACCTGGTACCGCACTGAC +
Preference number: 3 (lower is better)
Translates to: RPMSTVILVKSG*RDTSKTWYRTD
Trigger: GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR GCA 72 bp ATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTaGCTTCTAAACACAAACCCCACCCCGCCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: MPGFRLPEAQTV*LLNTNPTPPLP
Trigger: AGGGAGAGGCGGGGTGGGGTTTGTGTTTAGAAGGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 72 bp TGTGTAATTGATGGTGGCACTCAGGCAGGCTACTCCTaGAACAGGACCAAGGCTCCTGGCGTGTACTGTGGA +
Preference number: 3 (lower is better)
Translates to: CVIDGGTQAGYS*NRTKAPGVYCG
Trigger: TCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGCCACCATCAATTACACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 72 bp AGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTaGCACTGGGAGTCACCTTTTTGGAGTCAAGGATGC +
Preference number: 3 (lower is better)
Translates to: SPEGPWITSGNQ*HWESPFWSQGC
Trigger: GCATCCTTGACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCACAGGGATTGGGCCACTaGGGGTCAAGAGTTGGGGAT +
Preference number: 3 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPQGLGH*GSRVGD
Trigger: ATCCCCAACTCTTGACCCCAAGTGGCCCAATCCCTG...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 72 bp GCCATTGATTCTCAGAAACTGAGCCTTACTCAGGCCTaGCACACCTCCAAAGTAGCCAGCATAGGGAAGCCG +
Preference number: 3 (lower is better)
Translates to: AIDSQKLSLTQA*HTSKVASIGKP
Trigger: CGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCCTGAGTAAGGCTCAGTTTCTGAGAATCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
3UTR-3UTR CAA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 3 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
3UTR TCA 72 bp GTGAAATGTAAACAAGGGCTTCCTGACGCTGCTCTGTaGCTTGTGCTAAACTTTCTGGGGGTGGCAGACCCA +
Preference number: 3 (lower is better)
Translates to: VKCKQGLPDAAL*LVLNFLGVADP
Trigger: TGGGTCTGCCACCCCCAGAAAGTTTAGCACAAGTCACAGAGCAGCGTCAGGAAGCCCTTGTTTACATTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
3UTR TCA 72 bp CTTGCCACATCTACAACCAAGCCAGACATGTGTAATTaGTGGTGGCACTCAGGCAGGCTACTCCTGAAACAG +
Preference number: 3 (lower is better)
Translates to: LATSTTKPDMCN*WWHSGRLLLKQ
Trigger: CTGTTTCAGGAGTAGCCTGCCTGAGTGCCACCATCAATTACACATGTCTGGCTTGGTTGTAGATGTGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR-3UTR CAA 90 bp CACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTAAAGGGAAAGCACGGATaGGGTGTGACTACTCTGGGT +
Preference number: 3 (lower is better)
Translates to: HIPESSRYDSPYPGWLPLKGKHG*GVTTLG
Trigger: ACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTT...TAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CCA 72 bp CTACTCAATGACTATTTAGGCCCTGACATTAAATTCTaGTCACCTCTAGGAATCAGGCCAGAGGTCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LLNDYLGPDIKF*SPLGIRPEVRD
Trigger: ATCTCTGACCTCTGGCCTGATTCCTAGAGGTGACCAGAATTTAATGTCAGGGCCTAAATAGTCATTGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR TCA 72 bp TATCATACATGTTCACATTCCAGAATCTTCCAGATATaGTTCTCCTTATCCAGGCTGGCTTCCTCTATTAGC +
Preference number: 3 (lower is better)
Translates to: YHTCSHSRIFQI*FSLSRLASSIS
Trigger: GCTAATAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCTGCTGGCCGGCTCCTaGGTTGGGATCTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWLLAGS*VGISGP
Trigger: CGGCCCCGAGATCCCAACCCAGGAGCCGGCCAGCAG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434555.7
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPDAAPT*AGLPAP
Trigger: CGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTC...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGCTGGCGGCCAGGCTaGGGGGTGCGTTTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGWRPG*GVRLGG
Trigger: CCCGCCCAAACGCACCCCTCAGCCTGGCCGCCAGCC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWLPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRDAAPT*AGLPAP
Trigger: CGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPRPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRAPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GGTGCCAGCAGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTGGCACTGGGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GASSPEGPWITSGNQWHWDAAPT*AGLPAP
Trigger: CGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTC...CCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTCGCGGGGCTGGGTCTaGAATCTCGGGGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSRGWV*NLGALG
Trigger: ACCCAGGGCCCCGAGATTCCAGACCCAGCCCCGCGA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434555.7
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPRPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRAAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRARQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWRQSRG*RPRGSA
Trigger: TGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCTGCTAGCAGCTGGGTaGAGGGCATGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLLLAAG*RAWAGP
Trigger: AGGCCCTGCCCATGCCCTCCACCCAGCTGCTAGCAG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAADRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: WQWQSGGVGRRSGIGCGHMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...ATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRALPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPLPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGAAGGGGGTCTTGCCTaGGCGATGGCTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTEGGLA*AMAPAV
Trigger: CACAGCTGGAGCCATCGCCCAGGCAAGACCCCCTTC...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPDAAPT*AGLPAP
Trigger: CGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCGGCCGGCTCCTGGGTTaGGATCTCGGGGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSGRLLG*DLGAAL
Trigger: GAGCGCGGCCCCGAGATCCCAACCCAGGAGCCGGCC...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434555.7
3UTR CAA 72 bp GCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACCAGGTCCACATCGCTG +
Preference number: 4 (lower is better)
Translates to: AKWRGWSPQRYR*RSSMGTRSTSL
Trigger: CAGCGATGTGGACCTGGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCGAAGGAGCACAGCCTTaGAGACGCGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPEGAQP*RRAPAS
Trigger: GGACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTC...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGAAGGAGCACAGCCTTaGAGACGCGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPREGAQP*RRAPAS
Trigger: GGACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TGGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGGGATCAGGGATTGGGCCACTCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: WSQGCLEVPHWGIRDWATPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...AGTGGCCCAATCCCTGATCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAARPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGTCCGGCTGCTGGCCATaGAGGAGCACTTTATACTCA +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWSGCWP*RSTLYS
Trigger: TGAGTATAAAGTGCTCCTGCATGGCCAGCAGCCGGA...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SPLGIRPEVRDIGLRLGWDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...CCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCRVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRAGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPLPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTATCACAGGGACACCCTaGTCCCAGCTGGTCACCCAC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPITGTP*SQLVTH
Trigger: GTGGGTGACCAGCTGGGACCAGGGTGTCCCTGTGAT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCGGCAGCCACTTCTaGCAGTGCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTESGSHF*QCFREQ
Trigger: CTGCTCCCTGAAGCACTGCCAGAAGTGGCTGCCGCT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp TCCATGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGACCCGCAAGACCAGGTaGCGAGTCAGGACAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SMAMAKWRGWSPQRYRLRTRKTR*RVRTGW
Trigger: CCACCCTGTCCTGACTCGCCACCTGGTCTTGCGGGT...CCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS-3UTR TCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCAAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTTCAGGGAGCAGGGTaGGTCTCACAGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPLQGAG*VSQAHR
Trigger: TCTGTGTGCCTGTGAGACTCACCCTGCTCCCTGAAG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCAGCACAGCTGGTTCTaGTTCCCGGAACGGGATGCT +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPQHSWF*FPERDA
Trigger: AGCATCCCGTTCCGGGAATCAGAACCAGCTGTGCTG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR GCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTETALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: GNLRHREPLSISVSPEGATALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...GGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCACTCTGCGAGGCAGTaGAGGGGCTGGCCCGACCCT +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTHSARQ*RGWPDP
Trigger: AGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRAPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCGGCCCTGGGGCTCCTaGCTCCTCTCTCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISRPWGS*LLSQTG
Trigger: CCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGCCG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTAGCCACTTCTGGCAGTaGTTCAGGGAGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTSHFWQ*FREQGE
Trigger: CTCACCCTGCTCCCTGAAGCACTGCCAGAAGTGGCT...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGCAGGAAGGGGGTCTTaGCTGGGCGATGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCAGRGS*LGDGSS
Trigger: GCTGGAGCCATCGCCCAGGCAAGACCCCCTTCCTGC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR GCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGCAAGACTCTGGGTCCTaGCCAGCACAGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEQDSGS*PAQLVL
Trigger: CAGAACCAGCTGTGCTGGGCAGGACCCAGAGTCTTG...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCTGCTAGCAGCTGGGTaGAGGGCATGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCLLAAG*RAWAGP
Trigger: AGGCCCTGCCCATGCCCTCCACCCAGCTGCTAGCAG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGACCGGGCAGGGCACTaGGGACCTCAGGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGDRAGH*GPQGAR
Trigger: CCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: SQHREAGSQTCPWQWQSGDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...GCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISRVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGC +
Preference number: 4 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVMTATV*AGVQSG
Trigger: GCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCAT...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: NLRHREPLSISVSPEGATMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTELWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPLPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCACCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCAGATGGGCACAGCACTaGGCATGGCAGGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPRWAQH*AWQEGG
Trigger: ACCCCCTTCCTGCCATGCCCAGTGCTGTGCCCATCT...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR TCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTRQSRG*RPRGSA
Trigger: TGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
CDS-3UTR TCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACCTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KWRGWSPQRYRLRSSMGTSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...GGTCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCAGGGGTTCCCAAGAGCTaGGAATTCCCCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPGVPKS*EFPLEE
Trigger: CTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCC...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGCCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCCCTCCCCAGATGCCCTaGAGCCCCTCTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: STQRLCQAFAFLKLKQCAPPQMP*SPSPLG
Trigger: ACCAAGAGGAGAGGGGCTTCAGGGCATCTGGGGAGG...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGAAGGAGCACAGCCTTaGAGACGCGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCEGAQP*RRAPAS
Trigger: GGACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCCCGTCTGGGCTGGGGTaGAGTCGGGCGGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSPSGLG*SRAVCI
Trigger: GATACACACCGCCCGACTGCACCCCAGCCCAGACGG...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TCCATGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: SMAMAKWRGWSPQRYRLRRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...CCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLDPSPT*LPCKGQ
Trigger: TTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPDPSPT*LPCKGQ
Trigger: TTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATC...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRDPSPT*LPCKGQ
Trigger: TTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp CATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGCCCAGCACCCATAGCTCGTGTCCTATCTaGCCCGGCAGGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: HTAQVPFVRSTGAVPSTHSSCPI*PGRGPT
Trigger: TGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCT...ATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTGCTAGCAGCTGGGTaGAGGGCATGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTLLAAG*RAWAGP
Trigger: AGGCCCTGCCCATGCCCTCCACCCAGCTGCTAGCAG...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLTHLQSSQHREAGSQTCRVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...ACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGAGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: RRRPPNVHCDIGEEWLPRAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...TCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TCCATGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SMAMAKWRGWSPQRYRLRAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...CCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp ACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: TPPSHTAQVPFVRSTGAVAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...CACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTAGGCAGTGCAGGGGCTaGCCCGACCCTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISRQCRG*PDPDSD
Trigger: GTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCT...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGCACAGCACTGGGCATaGCAGGAAGGGGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCAQHWA*QEGGLA
Trigger: GGCAAGACCCCCTTCCTGCCATGCCCAGTGCTGTGC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp GTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTAGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VHCDIGEEWLPRHLQDLVDAAPT*AGLPAP
Trigger: CGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTC...TACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GGTGCCAGCAGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTGGCACTGGTCCTGGCGTGTACTGTaGAGCTCCACTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GASSPEGPWITSGNQWHWSWRVL*SSTPPQ
Trigger: CTGGGGAGGAGTGGAGCTCCACAGTACACGCCAGGA...CCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp GGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLTHLQSSQHREAGSQTCCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...ACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: NLRHREPLSISVSPEGATSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTTGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAATGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPECRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGGAACCAGACTTACTaGTCCAAGCCCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGNQTY*SKPHLP
Trigger: AGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAAGGGTGCCAGCAGTCCTaGGGGGCCTTGGATCACATC +
Preference number: 4 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPEGCQQS*GALDHI
Trigger: GATGTGATCCAAGGCCCCTCAGGACTGCTGGCACCC...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGAAGGAGCACAGCCTTaGAGACGCGCTCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISEGAQP*RRAPAS
Trigger: GGACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRAGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPLVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRALVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPDPSPT*LPCKGQ
Trigger: TTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATC...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp CATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGCCCAGCACCCATTCCACCCAGCGGCTATaGCAGGCTTTCGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HTAQVPFVRSTGAVPSTHSTQRL*QAFAFL
Trigger: CAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA...ATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp TCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGCCACTCCTCCCCAGATaGCCTGAAGCCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPLGIRPEVRDIGLRLGWPLLPR*PEAPLL
Trigger: GAGGAGAGGGGCTTCAGGGCATCTGGGGAGGAGTGG...CCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGRVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGGTTGCGGTCATCCATaGGGACCAGGTCCACATCGC +
Preference number: 4 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLGCGHP*GPGPHR
Trigger: GCGATGTGGACCTGGTCCCCATGGATGACCGCAACC...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ALRQATPETGPRLLACTVMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRASQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCCTCTGGTCCCCTCCTaGGGCTGCTCCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGPLVPS*GCSSAG
Trigger: CCCTGCTGAGGAGCAGCCCCAGGAGGGGACCAGAGG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTCCTTCCAGGAGCCATaGTGGGAAGTGGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSFQEP*WEVVWS
Trigger: TGACCAAACCACTTCCCACCATGGCTCCTGGAAGGA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCGGAGTCAAGGATGCTTaGAGGTCCCCCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: STQRLCQAFAFLKLKQCAGVKDA*RSPTGG
Trigger: TCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCC...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CAA 72 bp GGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: GHDGGRPMSTVI*VKSGCRDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCCGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPRQSRG*RPRGSA
Trigger: TGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACG...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
CDS-3UTR TCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp TCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: SPLGIRPEVRDIGLRLGWAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...CCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCCATGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: SMAMAKWRGWSPQRYRLRSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...CCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAAAAGAGGGCCACACTTaGAGAGCCTGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPKEGHT*RACPGR
Trigger: CCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTT...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTTTCCACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGACCTAACATCCAGACGTaGCTTTCCCCCGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LSTPPSHTAQVPFVRSTGPNIQT*LSPAPL
Trigger: CAGTGGGGCGGGGGAAAGTCACGTCTGGATGTTAGG...TCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TGGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGGGATCAGGGATTGGGCCACTCTTCAGGTTCTTCCATaGCTCCCCAGTCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WSQGCLEVPHWGIRDWATLQVLP*LPSPLG
Trigger: TCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAG...AGTGGCCCAATCCCTGATCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPAAWPG*RCPHHD
Trigger: GTCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485678.6
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCTALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLLVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRLVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGATCCAAGCCCCACCTaGCTCCCATGCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCDPSPT*LPCKGQ
Trigger: TTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCGGTCCACAGGAGCTGTaGCCAGCACCCATTAGCTCG +
Preference number: 4 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVGPQEL*PAPISS
Trigger: CGAGCTAATGGGTGCTGGGCACAGCTCCTGTGGACC...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTERVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGAAHEHA*VLPLHP
Trigger: CGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGC...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTTGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTCRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGTGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTECRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTCAAAGCCAGCCCCTTaGGACTGGGACCAAGACTCT +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPSKPAP*DWDQDS
Trigger: AGAGTCTTGGTCCCAGTCCCAAGGGGCTGGCTTTGA...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGTGGGGGATCAGGGATTaGGCCACTTGGGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLWGIRD*ATWGQE
Trigger: CTCTTGACCCCAAGTGGCCCAATCCCTGATCCCCCA...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGCCCAGCACCCATAGAGGTCAGAGATATTaGGCTGAGGCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTAQVPFVRSTGAVPSTHRGQRY*AEAGLG
Trigger: CCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCT...ATGGGTGCTGGGCACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCRQSRG*RPRGSA
Trigger: TGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACG...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGCGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: ALRQATPETGPRLLACTVRQSRG*RPRGSA
Trigger: TGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACG...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQHREAGSQTCPWQWQSGGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...GCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485678.6
CDS-3UTR TCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGCGGTATGTCGCGGTCGTGCTTaGTCATGCGGTAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PLRVRFVMLVAVVLDHAVCRGRA*SCGSGR
Trigger: TCGGCCGCTACCGCATGATCAAGCACGACCGCGACA...TACCGCATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGADLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GGGCGTGAGATCTTCATCCCAGTCAGGGAGATCCGGTTGAAGATGTCATCATCCGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: GREIFIPVREIRLKMSSSDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...GGATGATGACATCTTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTGTCGGGAAGGAGGGTTaGCTCCAAAGAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLTHLQSSQHREAGSQTCVGKEG*LQRGPH
Trigger: GTGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGAC...ACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCGGGAACCAGACTTACTaGTCCAAGCCCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSGNQTY*SKPHLP
Trigger: AGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCC...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CTTTCCACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGACCACAGGTGCACAAGTaGGGTCTTCGAGGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LSTPPSHTAQVPFVRSTGPQVHK*GLRGHQ
Trigger: TTGGTGCCCTCGAAGACCTCACTTGTGCACCTGTGG...TCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGGCAAACAAGGCCACTaGTCCTGGACTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISGKQGH*SWTSTA
Trigger: GGCTGTGGAAGTCCAGGAGCAGTGGCCTTGTTTGCC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309519.8
CDS-3UTR GCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCACGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CATCCCCAGGCCCTGTACCACTATGCTCCCTTGGACTCCATCGATTCCTTCAGGCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: HPQALYHYAPLDSIDSFRRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...CCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCCTGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPTALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISTALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCACCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCCCACCTGCCTCCCATaGAAAGGCCAACCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPPTCLP*KGQPQD
Trigger: ATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR GCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCACCCCCTTCCCATACTaGTCAGGTCCCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: STQRLCQAFAFLKLKQCATPFPY*SGPLCQ
Trigger: CTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGT...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTGCTGACTTTCTCTCCTaGTCCACCCAGCGGCTATGC +
Preference number: 4 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPADFLS*STQRLC
Trigger: GCATAGCCGCTGGGTGGAGCAGGAGAGAAAGTCAGC...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp ACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTGGGCCCTGTACCACTATaGTCCCTTGGACTCCATCGA +
Preference number: 4 (lower is better)
Translates to: TPPSHTAQVPFVRSTGAVGPVPL*SLGLHR
Trigger: TCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCC...CACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGGACAGGGTGGCAGCGTaGGAGCCGTGGGACCGGGCA +
Preference number: 4 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLDRVAA*EPWDRA
Trigger: TGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTC...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCACGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPRVRTG*QRGSRG
Trigger: CCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCG...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLRHRLG*GAVGRC
Trigger: ACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCG...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CATCCCCAGGCCCTGTACCACTATGCTCCCTTGGACTCCATCGATTCCTTCAGGGCTGCCGCCTCAAGATaGGGTGTAGATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: HPQALYHYAPLDSIDSFRAAASR*GVDSGA
Trigger: GGCTCCACTATCTACACCCCATCTTGAGGCGGCAGC...CCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCCTGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPCRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGTGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NLRHREPLSISVSPEGATCRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp TGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: CQPGCGQSSGRQSSAPRADIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...GGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTDIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEDIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCCTGTGGTCAGTCCTCTaGCAGGCAATCTTCGGCACC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSLWSVL*QAIFGT
Trigger: GGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAG...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCTTGCCTGGGCGATaGCTCCAGCTGTGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISVLPGR*LQLWFQ
Trigger: TTGGAACCACAGCTGGAGCCATCGCCCAGGCAAGAC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR TCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGAAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGAGCTGTTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: HTPFPYCSGPLCQVHRSCSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...ACAGCTCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: QLPARLWSVLWQAIFGTEILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAATGCTGGGGTCACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPECWGHL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTGACCCCAGCA...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCTTCTCCCAGCCAGCCTaGTACCAAATGTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: STQRLCQAFAFLKLKQCAFSQPA*YQMWLP
Trigger: AGGTAGCCACATTTGGTATCAGGCTGGCTGGGAGAA...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCCCCTGGAAGAGACACTaGCCCCTAGACATACCTCCC +
Preference number: 4 (lower is better)
Translates to: SQHREAGSQTCPWQWQSGPWKRH*PLDIPP
Trigger: GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG...GCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTCACAAACAAGGCCACTaGTCCTGGACTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISHKQGH*SWTSTA
Trigger: GGCTGTGGAAGTCCAGGAGCAGTGGCCTTGTTTGTG...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR GCA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGCACCAGTCCCTCTTCTaGCAAGACAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ALRQATPETGPRLLACTVHQSLF*QDNTLP
Trigger: AGGCAAGGTGTTGTCTTGGCAGAAGAGGGACTGGTG...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCAAGGCCACTGCTCCTaGACTTCCACAGCCATACAT +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCQGHCS*TSTAIH
Trigger: ATGTATGGCTGTGGAAGTCCAGGAGCAGTGGCCTTG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309519.8
ENST00000356836.10
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCACTTGTCCATGGCAATaGCAAAGTGGCGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RQATPETGPRLLACTVELTCPWQ*QSGGVG
Trigger: ACCAACCCCGCCACTTTGCCATTGCCATGGACAAGT...GAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp AGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RQATPETGPRLLACTVELSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...GAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCGATGGCTCCAGCTGTaGTTCCAAGAGAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGRWLQL*FQESGS
Trigger: GCTGCCGCTCTCTTGGAACCACAGCTGGAGCCATCG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp AGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCAGTCCTGAGGGGCCTTaGATCACATCAGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: RQATPETGPRLLACTVELSPEGP*ITSGNQ
Trigger: CTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACT...GAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CAA 72 bp CACATCAGGGAATCAGTGGCACTGGGAGTCACCTTTTaGGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: HIRESVALGVTF*ESRMLGGPPLG
Trigger: CCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEGAWVR*TRSAVC
Trigger: GCAGACTGCTGATCGAGTTCACCTCACCCATGCCCC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
CDS-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGCAGCTTGGCCCGGTTaGAGGTGTCCTCACCATGCT +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEAAWPG*RCPHHA
Trigger: AGCATGGTGAGGACACCTTCAACCGGGCCAAGCTGC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR TCA 90 bp GGTGCCAGCAGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTGGCACTGGCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GASSPEGPWITSGNQWHWHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...CCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCATCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCTCAGGGAGATCCGGTTaGAGATGTCATCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSSGRSG*RCHHPR
Trigger: GCGAGGATGATGACATCTTCAACCGGATCTCCCTGA...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GGTAAACCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGACCTGGTACCGCACTaGCCCAATGCCGTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: GKPLRVRFVMLVAVVLDHDLVPH*PNAVPL
Trigger: AAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTC...ATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGGTTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTCCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGGGAACCAGACTTACTaGTCCAAGCCCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGGNQTY*SKPHLP
Trigger: AGGCAGGTGGGGCTTGGATCAGTAAGTCTGGTTCCC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR TCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCAGGCTTTCGCCTTCCTaGAGCTCAAACAGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVRLSPS*SSNSVP
Trigger: AGGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCT...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGCCAGACATGTGTAATTaGTGGTGGCACTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLGIRPEVRDIGLRLGWPDMCN*WWHSGR
Trigger: CCTGCCTGAGTGCCACCATCAATTACACATGTCTGG...CCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSLVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTCCACACAAGTTTCTGTaGAATGTACAAACACAAGCC +
Preference number: 4 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTPHKFL*NVQTQA
Trigger: GGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGG...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR GCA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCGGGATATTGGGAAGTTaGCTCTGGGGAGTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVGILGS*LWGVRG
Trigger: ACCCCTTACTCCCCAGAGGCAACTTCCCAATATCCC...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGCCAGTTGGAGGCCACTaGAGTAGTCCAGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLPVGGH*SSPGRI
Trigger: GATCCTGCCTGGACTACTGCAGTGGCCTCCAACTGG...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCTCCCCTCTCCATCCATaGTCCATATGCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCSPLHP*SICNQS
Trigger: ACTCTGGTTGCATATGGAGCATGGATGGAGAGGGGA...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485678.6
CDS-3UTR GCA 90 bp CTTGGTAAACCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCCTGGGTTCTCCCTCTaGACCCGCAAGACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGKPLRVRFVMLVAVVLDPGFSL*TRKTRW
Trigger: CCACCTGGTCTTGCGGGTGCAGAGGGAGAACCCAGG...ATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGGTTTACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGATGGCAATGGCAAAGTaGCGGGGTTGGTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEMAMAK*RGWSPQ
Trigger: CTGCGGCGACCAACCCCGCCACTTTGCCATTGCCAT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAAGCCAAACTTGTCCATaGCAATGGCAAAGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPSQTCP*QWQSGG
Trigger: CCCGCCACTTTGCCATTGCCATGGACAAGTTTGGCT...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCCAACTGGGACCAGGCTaGGAAGTTGCCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGQLGPG*EVALSI
Trigger: GATGCTGAGGGCAACTTCCCAGCCTGGTCCCAGTTG...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAAAGGGATTGGGCCACTTaGGGTCAAGAGTTGGGGATA +
Preference number: 4 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPERDWAT*GQELGI
Trigger: TATCCCCAACTCTTGACCCCAAGTGGCCCAATCCCT...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CAA 72 bp CCTGCCTGGAATGAACTTCGTAAGGGAAAGCACGGATaGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PAWNELRKGKHG*GVTTLGLPPPE
Trigger: TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACGAAGTTCATTCCAGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGARGFPRAENSPWKRHCPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCCATTAGCTCGTGTCCTATCTGCCCCGGCAGGGGTCCCACAGGTGCACAAGTGCTGACATGTACATGGTaGAAGGGCAACAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PISSCPICPGRGPTGAQVLTCTW*KGNRRK
Trigger: TTTTCTTCTGTTGCCCTTTCACCATGTACATGTCAG...CACTTGTGCACCTGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCTAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAACCTGACGCTGCTCTGTaGCTTGTGCTAAACTTTCTG +
Preference number: 4 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPEPDAAL*LVLNFL
Trigger: CAGAAAGTTTAGCACAAGTCACAGAGCAGCGTCAGG...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp GGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLTHLQSSQHREAGSQTCGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...ACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGACCGCACTGACCCAATaGCGTCCCGCTTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTETALTQ*RPASWS
Trigger: TGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCCACACAAGTTTCTGTaGAATGTACAAACACAAGCC +
Preference number: 4 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLPHKFL*NVQTQA
Trigger: GGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGGCAAAGTGGCGGGGTTaGTCGCCGCAGCGGTATAGG +
Preference number: 4 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLAKWRG*SPQRYR
Trigger: CCTATACCGCTGCGGCGACCAACCCCGCCACTTTGC...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCATGCCGTCCCGCTTCATaGTCAGCTTCGTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPCRPAS*SASCFE
Trigger: TTCAAAACACGAAGCTGACCATGAAGCGGGACGGCA...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGCGGTAGACACCTCCAAGACCTaGTACCGCACTGACCCAATG +
Preference number: 4 (lower is better)
Translates to: PLRVRFVMLVAVVLDHAVDTSKT*YRTDPM
Trigger: CATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTC...TACCGCATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAADIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGCTGCCAGCCAGGCTGTaGTCAGTCCTCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLLPARL*SVLWQA
Trigger: TGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAG...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGCTGAGAATTCCCCCTaGAAGAGACACTGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGAENSP*KRHCPL
Trigger: TAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTTTCCAGGAGCCATGGTaGGAAGTGGTTTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: VVSPLAGNLRHREPLSISFQEPW*EVVWSF
Trigger: GAATGACCAAACCACTTCCCACCATGGCTCCTGGAA...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCCACTCCTAAGAGTTGGGGATATTaGGAAGTTGCCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLLKQDQGSWRVLWSSTPKSWGY*EVASGE
Trigger: CTCCCCAGAGGCAACTTCCCAATATCCCCAACTCTT...AGGAGTGGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp TCACCTCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGAATCAGTGGCACTaGGAGTCACCTTTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPLGIRPEVRDIGLRLGWGNQWH*ESPFWS
Trigger: ACTCCAAAAAGGTGACTCCCAGTGCCACTGATTCCC...CCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp TCCACCCAGCGGCTATGCCAGGCTTTCGCCTTCCTGAAGCTCAAACAGTGTGCCACATCAGGGAATCAGTaGCACTGGGAGTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: STQRLCQAFAFLKLKQCATSGNQ*HWESPF
Trigger: AAAAGGTGACTCCCAGTGCCACTGATTCCCTGATGT...GGCACACTGTTTGAGCTTCAGGAAGGCGAAAGCCTGGCATAGCCGCTGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CATCCCCAGGCCCTGTACCACTATGCTCCCTTGGACTCCATCGATTCCTTCAGGTCAATTTCAGAGGGGTaGGCACTGTCTTTCCACACC +
Preference number: 4 (lower is better)
Translates to: HPQALYHYAPLDSIDSFRSISEG*ALSFHT
Trigger: GGTGTGGAAAGACAGTGCCCACCCCTCTGAAATTGA...CCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCCTGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACTCACCGCCTCTTTCCTaGGCATCGTCCTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDSPPLS*ASSSLP
Trigger: TGGAAGAGAGGACGATGCCCAGGAAAGAGGCGGTGA...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485678.6
CDS-3UTR TCA 90 bp CACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTATGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HIPESSRYDSPYPGWLPLCIGRP*ARLGSP
Trigger: GGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACA...TAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGACATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRRPPNVHCDIGEEWLPRHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...TCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGTCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTESDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCACCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTAGCACTTTATACTCATaGCTTCATTTAGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSTLYS*LHLVLP
Trigger: TGGAAGGACTAAATGAAGTCATGAGTATAAAGTGCT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR TCA 90 bp CATCCCCAGGCCCTGTACCACTATGCTCCCTTGGACTCCATCGATTCCTTCAGGAACTGCCTTTTTCCATaGCTATCTCCCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HPQALYHYAPLDSIDSFRNCLFP*LSPCLE
Trigger: TTCCAGGCAGGGAGATAGTCATGGAAAAAGGCAGTT...CCTGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTACAGGGCCTGGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGTATTCAAGACCCCTaGCATGTACATGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SRNQARGQRYWAEAGLGVGIQDP*HVHGER
Trigger: CCTTTCACCATGTACATGTCAGGGGTCTTGAATACC...AACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp CCCATTAGCTCGTGTCCTATCTGCCCCGGCAGGGGTCCCACAGGTGCACAAGTGTTTGGATATGTAGGGTaGGGAAAAGAAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: PISSCPICPGRGPTGAQVFGYVG*GKEESR
Trigger: TCTGGATTCTTCTTTTCCTCACCCTACATATCCAAA...CACTTGTGCACCTGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCTAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTTGGTAAACCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCGCAGCGGTATAGGTTaGGGTCATCCATGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGKPLRVRFVMLVAVVLDRSGIG*GHPWGP
Trigger: TGGTCCCCATGGATGACCGCAACCTATACCGCTGCG...ATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGGTTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGGAAGCTCAAACAGTGTaGCTTCTAAACACAAACCCC +
Preference number: 4 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLEAQTV*LLNTNP
Trigger: GGGGTTTGTGTTTAGAAGGCACACTGTTTGAGCTTC...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGAGATATTGGTGAAGAGTaGTTGCCGAGACACCTCCAA +
Preference number: 4 (lower is better)
Translates to: RRRPPNVHCDIGEEWLPRDIGEE*LPRHLQ
Trigger: TTGGAGGTGTCTCGGCAACCACTCTTCACCAATATC...TCTCGGCAACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCAGAATCCCTTCCCACTaGAGCAAAACGTCAAAATAC +
Preference number: 4 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPRIPSH*SKTSKY
Trigger: GTATTTTGACGTTTTGCTCCAGTGGGAAGGGATTCT...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CTTTCCACACCCCCTTCCCATACTGCTCAGGTCCCCTTTGTCAGGTCCACAGGATGGGAGTCACCTTTTTaGAGTCAAGGATGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LSTPPSHTAQVPFVRSTGWESPF*SQGCLE
Trigger: CTCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCA...TCCTGTGGACCTGACAAAGGGGACCTGAGCAGTATGGGAAGGGGGTGTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCCATTGGGGAAGCCATTaGTTCTCAGAAACTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQHREAGSQTCPWQWQSGHWGSH*FSETEP
Trigger: AGGCTCAGTTTCTGAGAATCAATGGCTTCCCCAATG...GCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCATCGGATGTCTGGGCGTaGGATCTTCATCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPSDVWA*DLHPSQ
Trigger: CTGACTGGGATGAAGATCTCACGCCCAGACATCCGA...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CATGGTGAAAGGGCAACAGAAGAAAAACCCCTAACATCCAGACGTGACTTTCCCAGCACGGATTGGGTGTaGCTACTCTGGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HGERATEEKPLTSRRDFPSTDWV*LLWVSH
Trigger: GTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCT...GGGAAAGTCACGTCTGGATGTTAGGGGTTTTTCTTCTGTTGCCCTTTCACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCACACAAGTTTCTGTaGAATGTACAAACACAAGCC +
Preference number: 4 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCPHKFL*NVQTQA
Trigger: GGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGG...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCAAGGCCACTGCTCCTaGACTTCCACAGCCATACAT +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEQGHCS*TSTAIH
Trigger: ATGTATGGCTGTGGAAGTCCAGGAGCAGTGGCCTTG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309519.8
ENST00000356836.10
CDS-3UTR CCA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGTCTCCTTATCCAGGCTaGCTTCCTCTATTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLSPYPG*LPLLAW
Trigger: CCAGGCTAATAGAGGAAGCCAGCCTGGATAAGGAGA...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGGGCCTAAAGGGTGTGTaGAATGTAAACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLGLKGV*NVNKGF
Trigger: GAAGCCCTTGTTTACATTTCACACACCCTTTAGGCC...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCAGGGTTAGGTTCGTTATaGTTGTCGCGGTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPGLGSL*LSRSCL
Trigger: CAAGCACGACCGCGACAAGCATAACGAACCTAACCC...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTTGGTAAACCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATTTGGTGAAGAGTGGTTaGCGAGACACCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: LGKPLRVRFVMLVAVVLDLVKSG*RDTSKT
Trigger: GGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAA...ATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGGTTTACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CCA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGGCCCAAATACAGACTaGATGTTTACAGAATCCCTT +
Preference number: 4 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPGPNTD*MFTESL
Trigger: AAGGGATTCTGTAAACATCCAGTCTGTATTTGGGCC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGTGGTGGGAAGTGGTTTaGTCATTCAGATCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEWWEVV*SFRSQR
Trigger: TCGCTGGGATCTGAATGACCAAACCACTTCCCACCA...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR TCA 90 bp GTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCCTACAATGTTGAATaGAAAAGGTTTCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VHCDIGEEWLPRHLQDLVPYNVE*KRFPLP
Trigger: GGGGAGGGGAAACCTTTTTCATTCAACATTGTAGGG...TACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp CATGGTGAAAGGGCAACAGAAGAAAAACCCCTAACATCCAGACGTGACTTTCCCTTTTGGAGTCAAGGATaGTTGGAGGTCCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: HGERATEEKPLTSRRDFPFWSQG*LEVPHW
Trigger: CCAGTGGGGGACCTCCAAGCATCCTTGACTCCAAAA...GGGAAAGTCACGTCTGGATGTTAGGGGTTTTTCTTCTGTTGCCCTTTCACCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000481924.2
3UTR CAA 72 bp CCCAATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTGAGGGTTAGGTTCGTT +
Preference number: 4 (lower is better)
Translates to: PNAVPLHGQLRV*NLGKPLRVRFV
Trigger: AACGAACCTAACCCTCAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR TCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGATCTTGGTAAACCTCTaGGGGTTAGGTTCGTTATGC +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEILVNL*GLGSLC
Trigger: GCATAACGAACCTAACCCTCAGAGGTTTACCAAGAT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR GCA 90 bp AAATGTGGCTACCTCCTAAGAGATACATCCACCTCCTTCAATTTCAGAGGGGTGGTAGAAAAACCCTCCTaGTCAAGCTGGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: KCGYLLRDTSTSFNFRGVVEKPS*SSWGHS
Trigger: GCTGTGTCCCCAGCTTGAGCAGGAGGGTTTTTCTAC...CACCCCTCTGAAATTGAAGGAGGTGGATGTATCTCTTAGGAGGTAGCCACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp ATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTATTACAGGACCAAGGCTCCTaGCGTGTACTGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IPESSRYDSPYPGWLPLLQDQGS*RVLWSS
Trigger: GGAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTG...TAATAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCCACACAAGTTTCTGTaGAATGTACAAACACAAGCC +
Preference number: 4 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEPHKFL*NVQTQA
Trigger: GGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR GCA 90 bp ATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTATTACAGGGGTCCCACAGGTaGACAAGTGAGGTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: IPESSRYDSPYPGWLPLLQGSHR*TSEVFE
Trigger: CTCGAAGACCTCACTTGTGCACCTGTGGGACCCCTG...TAATAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGAAGCCAGAAACTTCTTaGTATCTTGCCACATCTACA +
Preference number: 4 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLKPETS*YLATST
Trigger: TGTAGATGTGGCAAGATAGCAAGAAGTTTCTGGCTT...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp TGTATCATACATGTTCACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGCTGCTGCTAGCAGCTaGGTGGAGGGCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CIIHVHIPESSRYDSPYPAAASS*VEGMGR
Trigger: CCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGC...TGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR TCA 90 bp TCTTCAGGTTCTTCCATGACTCCCCAGTCCTCTGGGACAAAAGTTAACCTCCCAAGAATCTTCCAGATATaGTTCTCCTTATCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSGSSMTPQSSGTKVNLPRIFQI*FSLSRL
Trigger: CAGCCTGGATAAGGAGAATCATATCTGGAAGATTCT...TGGGAGGTTAACTTTTGTCCCAGAGGACTGGGGAGTCATGGAAGAACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR GCA 90 bp CATGGTGAAAGGGCAACAGAAGAAAAACCCCTAACATCCAGACGTGACTTTCCCAACTTCTTGCTATCTTaGCACATCTACAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: HGERATEEKPLTSRRDFPNFLLS*HIYNQA
Trigger: GGCTTGGTTGTAGATGTGGCAAGATAGCAAGAAGTT...GGGAAAGTCACGTCTGGATGTTAGGGGTTTTTCTTCTGTTGCCCTTTCACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp CACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAGGCTGGCTTCCTCTACCTGACATTAAATTCTaGTCACCTCTAGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: HIPESSRYDSPYPGWLPLPDIKF*SPLGIR
Trigger: CCTGATTCCTAGAGGTGACCAGAATTTAATGTCAGG...TAGAGGAAGCCAGCCTGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CCA 90 bp TGTATCATACATGTTCACATTCCAGAATCTTCCAGATATGATTCTCCTTATCCAACCACTATGCTCCCTTaGACTCCATCGATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CIIHVHIPESSRYDSPYPTTMLP*TPSIPS
Trigger: TGAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGT...TGGATAAGGAGAATCATATCTGGAAGATTCTGGAATGTGAACATGTATGATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS CCA 90 bp TGCTGGCCCGGCGCTCGGGGCTCAGCAGGGGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCGGCGGCTGCGGACGGTTCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: CWPGARGSAGDAAPT*AGLPAPAAADGSVP
Trigger: GGGGACGGAACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCCCCTGCTGAGCCCCGAGCGCCGGGCCAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372324.6
ENST00000481924.2
CDS CCA 90 bp CCCCAGCAGTCTGCTCATCCCGCAGGCGGCCACTGGCCCGCCCAGTaGGCCCGGGCATCCGGCTGCTGGCCCGGCGCTCGGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PQQSAHPAGGHWPAQ*ARASGCWPGARGSA
Trigger: TGCTGAGCCCCGAGCGCCGGGCCAGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGACTGCTGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CCA 90 bp CTCTCACCCGGCGCTCGGGGCTCAGCAGGGGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCGGCGGCTGCGGACGGTTCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: LSPGARGSAGDAAPT*AGLPAPAAADGSVP
Trigger: GGGGACGGAACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCCCCTGCTGAGCCCCGAGCGCCGGGTGAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434555.7
CDS CCA 90 bp CCCCAGCAGTCTGCTCATCCCGCAGGCGGCCACTGGCCCGCCCAGTaGGCCCGGGCATCCGGCTGCTGGCAAACAAGGCCACTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: PQQSAHPAGGHWPAQ*ARASGCWQTRPLLL
Trigger: CAGGAGCAGTGGCCTTGTTTGCCAGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGACTGCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309519.8
CDS TCA 90 bp CCGTCTGGGCTGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCCTCTGCACCCGCTCCAGGGGCATGG +
Preference number: 5 (lower is better)
Translates to: PSGLGCSRAVCIGRP*ARLGSPSAPAPGAW
Trigger: CCATGCCCCTGGAGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS TCA 90 bp CCGTCTGGGCTGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCCTCTGCACCCGCAAGACCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PSGLGCSRAVCIGRP*ARLGSPSAPARPGG
Trigger: GCCACCTGGTCTTGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS CCA 90 bp TTCTCCCTCTGCACCCGCAAGACCAGGTGGCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGGACCGGGCAGGGCACTGGGGACCTC +
Preference number: 5 (lower is better)
Translates to: FSLCTRKTRWRVRTG*QRGSRGTGQGTGDL
Trigger: GAGGTCCCCAGTGCCCTGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCGCCACCTGGTCTTGCGGGTGCAGAGGGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS CCA 90 bp GATCAGCAGTCTGCCCACAAGACCAGGTGGCGAGTCAGGACAGGGTaGCAGCGTGGGAGCCGTGGGACCGGGCAGGGCACTGGGGACCTC +
Preference number: 5 (lower is better)
Translates to: DQQSAHKTRWRVRTG*QRGSRGTGQGTGDL
Trigger: GAGGTCCCCAGTGCCCTGCCCGGTCCCACGGCTCCCACGCTGCCACCCTGTCCTGACTCGCCACCTGGTCTTGTGGGCAGACTGCTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS-3UTR CAA 90 bp GCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCAGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AIFGTESLCPLVSAPRGPGRRSD*GRAPGS
Trigger: GGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCC...TGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS CCA 90 bp GGCCGGGAGCAGTTGCTGCTGCTGCTGCTGCTGCTAGCAGCTGGGTaGAGGGCATGGGCAGGGCCTCGGGCACTGAAGCGGCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GREQLLLLLLLLAAG*RAWAGPRALKRLKK
Trigger: CTTCTTCAGCCGCTTCAGTGCCCGAGGCCCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGCAGCAGCAGCAGCAACTGCTCCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CCA 90 bp TGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCGCAAGACCAGGTGGCGAGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: WGAVGRCVSAAHEHA*VLPLHPQDQVASQD
Trigger: GTCCTGACTCGCCACCTGGTCTTGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS CCA 90 bp GTGTTCCCGGTGTCTAAAGGGGATGATGACCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATGAGCACGCC +
Preference number: 5 (lower is better)
Translates to: VFPVSKGDDDRHRLG*GAVGRCVSAAHEHA
Trigger: GGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCATCATCCCCTTTAGACACCGGGAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CAGCTGCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: QLPARLWSVLWQAIFGTELEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...CTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: PWKTEPSLSPGGPPQSSCGRRSD*GRAPGS
Trigger: GGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCC...GCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS GCA 90 bp GGCGGTGTGTATCGGCCGCCCATGAGCACGCCTGGGTTCTCCCTCTaGACCCGCTCCAGGGGCATGGGTGAGGTGAACTCGATCAGCAGT +
Preference number: 5 (lower is better)
Translates to: GGVYRPPMSTPGFSL*TRSRGMGEVNSISS
Trigger: ACTGCTGATCGAGTTCACCTCACCCATGCCCCTGGAGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS CCA 90 bp AGGTGGTGTTCCCGGTGTCTAAAGGGGATGATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATGAGC +
Preference number: 5 (lower is better)
Translates to: RWCSRCLKGMMTATV*AGVQSGGVYRPPMS
Trigger: GCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCATCATCCCCTTTAGACACCGGGAACACCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CCA 90 bp GGGCACAGCACTGGGCATGGCAGGAAGGGGGTCTTGCCTGGGCGATaGCTCCAGCTGTGGTTCCAAGAGAGCGGCAGCCACTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GHSTGHGRKGVLPGR*LQLWFQESGSHFWQ
Trigger: CTGCCAGAAGTGGCTGCCGCTCTCTTGGAACCACAGCTGGAGCCATCGCCCAGGCAAGACCCCCTTCCTGCCATGCCCAGTGCTGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVGRRSD*GRAPGS
Trigger: GGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCC...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPGRRSD*GRAPGS
Trigger: GGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCC...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS TCA 90 bp CGCCTGGGTTCTCCCTCTGCACCCGCTCCAGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGCCCACAAGACCAGGTGGCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RLGSPSAPAPGAWVR*TRSAVCPQDQVASQ
Trigger: CTGACTCGCCACCTGGTCTTGTGGGCAGACTGCTGATCGAGTTCACCTCACCCATGCCCCTGGAGCGGGTGCAGAGGGAGAACCCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS GCA 90 bp AGGCTCGTCCAAAGGGTGGGCTTAGAGGTCGGACCGGCGAGCGGGTaGAGACCGTGGAGTCCCTTAGCGGGGAGTGGGGATTGCATTGGA +
Preference number: 5 (lower is better)
Translates to: RLVQRVGLEVGPASG*RPWSPLAGSGDCIG
Trigger: TCCAATGCAATCCCCACTCCCCGCTAAGGGACTCCACGGTCTGCACCCGCTCGCCGGTCCGACCTCTAAGCCCACCCTTTGGACGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS CCA 90 bp GGGCATGGCAGGAAGGGGGTCTTGCCTGGGCGATGGCTCCAGCTGTaGTTCCAAGAGAGCGGCAGCCACTTCTGGCAGTGCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GHGRKGVLPGRWLQL*FQESGSHFWQCFRE
Trigger: CTCCCTGAAGCACTGCCAGAAGTGGCTGCCGCTCTCTTGGAACCACAGCTGGAGCCATCGCCCAGGCAAGACCCCCTTCCTGCCATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS CCA 90 bp CAAAGGGTGGGCTTAGAGGTCGGACCGGCGAGCGGGTGCAGACCGTaGAGTCCCTTAGCGGGGAGTGGGGATTGCATTGGAGCGCGAACT +
Preference number: 5 (lower is better)
Translates to: QRVGLEVGPASGCRP*SPLAGSGDCIGART
Trigger: AGTTCGCGCTCCAATGCAATCCCCACTCCCCGCTAAGGGACTCCACGGTCTGCACCCGCTCGCCGGTCCGACCTCTAAGCCCACCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS-3UTR CAA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCATGGCCGGCTCCTGGGTaGGGATCTCGGGGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPWPAPG*GSRGRA
Trigger: AGCGCGGCCCCGAGATCCCAACCCAGGAGCCGGCCA...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434555.7
CDS TCA 90 bp GGGACTGGGACCAAGACTCTGGGTCCTGCCCAGCACAGCTGGTTCTaGTTCCCGGAACGGGATGCTTGGGCCTGGAGATGGGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: GTGTKTLGPAQHSWF*FPERDAWAWRWAQH
Trigger: GTGCTGTGCCCATCTCCAGGCCCAAGCATCCCGTTCCGGGAATCAGAACCAGCTGTGCTGGGCAGGACCCAGAGTCTTGGTCCCAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGAGAAGGAGCACAGCCTaGCAGACGCGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLRRSTA*QTRSSV
Trigger: GACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCT...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCLEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAALEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 5 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 5 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp TTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: FPLEETLPPRHTSHPSRPPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...GGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CACTCTGCGAGGCAGTGCAGGGGCTGGCCCGACCCTGACAGTGACTGGGGCTGGGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: HSARQCRGWPDPDSDWGWVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...CCAGCCCCAGTCACTGTCAGGGTCGGGCCAGCCCCTGCACTGCCTCGCAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCCTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: ALGLLPPLSDREAGTRLTGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...AGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS GCA 90 bp CAGCCATACATCCAGACTCTCAGACAGCTCACACCCAGACCCACGTaGAGACATTCCCACCCTCCCTCCGGCGCAGGGGTTCTGGGTCAG +
Preference number: 5 (lower is better)
Translates to: QPYIQTLRQLTPRPT*RHSHPPSGAGVLGQ
Trigger: CTGACCCAGAACCCCTGCGCCGGAGGGAGGGTGGGAATGTCTGCACGTGGGTCTGGGTGTGAGCTGTCTGAGAGTCTGGATGTATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS GCA 90 bp ACCTCAAAGCCAGCCCCTTGGGACTGGGACCAAGACTCTGGGTCCTaGCCAGCACAGCTGGTTCTGATTCCCGGAACGGGATGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TSKPAPWDWDQDSGS*PAQLVLIPGTGCLG
Trigger: GCCCAAGCATCCCGTTCCGGGAATCAGAACCAGCTGTGCTGGGCAGGACCCAGAGTCTTGGTCCCAGTCCCAAGGGGCTGGCTTTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp TGGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGGGATCAGGGATTGGGCCACTAGAAGGAGCACAGCCTaGCAGACGCGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: WSQGCLEVPHWGIRDWATRRSTA*QTRSSV
Trigger: GACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCT...AGTGGCCCAATCCCTGATCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPLEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAACTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPELEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp GGTGCCAGCAGTCCTGAGGGGCCTTGGATCACATCAGGGAATCAGTGGCACTGGCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: GASSPEGPWITSGNQWHWPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...CCAGTGCCACTGATTCCCTGATGTGATCCAAGGCCCCTCAGGACTGCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATCCATGGGGACAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QSGGVGRRSGIGCGHPWGQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...TCCCCATGGATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VAETPPRPGTALTQCRPAQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...AGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCCATTAGCTCGTGTCCTATCTGCCCCGGCAGGGGTCCCACAGGTGCACAAGTGCTGGGGGATCAGGGATaGGGCCACTTGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: PISSCPICPGRGPTGAQVLGDQG*GHLGSR
Trigger: TCTTGACCCCAAGTGGCCCAATCCCTGATCCCCCAG...CACTTGTGCACCTGTGGGACCCCTGCCGGGGCAGATAGGACACGAGCTAATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS TCA 90 bp CCAAGAGAGCGGCAGCCACTTCTGGCAGTGCTTCAGGGAGCAGGGTaGGTCTCACAGGCACACAGAATCACAGGGACACCCTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PRERQPLLAVLQGAG*VSQAHRITGTPWSQ
Trigger: CTGGGACCAGGGTGTCCCTGTGATTCTGTGTGCCTGTGAGACTCACCCTGCTCCCTGAAGCACTGCCAGAAGTGGCTGCCGCTCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp AGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTCCATGGCAATGGCAAAGTGGCCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQHREAGSQTCPWQWQSGLEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...GCCACTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS TCA 90 bp AAGCCCACGTTAAGCAGCTTGGCCCGGTTGAAGGTGTCCTCACCATaGCATCCGCAGGGTCACCGCCTCTTTCCTGGGCATCGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: KPTLSSLARLKVSSP*HPQGHRLFPGHRPL
Trigger: GAGAGGACGATGCCCAGGAAAGAGGCGGTGACCCTGCGGATGTCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485678.6
CDS-3UTR CAA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCAGAAGGAGCACAGCCTaGCAGACGCGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTRRSTA*QTRSSV
Trigger: GACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCT...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAAGAAGGAGCACAGCCTaGCAGACGCGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPRRSTA*QTRSSV
Trigger: GACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCT...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDLEAVA*GREQLL
Trigger: CAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAG...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCCCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGCCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ALRQATPETGPRLLACTVPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGGCAGGAAGGGGGTCTaGCCTGGGCGATGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGGRKGV*PGRWLQ
Trigger: CTGGAGCCATCGCCCAGGCAAGACCCCCTTCCTGCC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 5 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp TCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTAGCAGCTTGGCCCGGTaGAAGGTGTCCTCACCATGC +
Preference number: 5 (lower is better)
Translates to: SRNQARGQRYWAEAGLGVSSLAR*KVSSPC
Trigger: GCATGGTGAGGACACCTTCAACCGGGCCAAGCTGCT...AACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCACCCACGTTAAGCAGCTaGGCCCGGTTGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ENSPWKRHCPLDIPPTLPPTLSS*ARLKVS
Trigger: GGACACCTTCAACCGGGCCAAGCTGCTTAACGTGGG...TGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTTCCAGGCCCTAGGAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PWKRHCPLDIPPTLPGPRSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...CCTAGGGCCTGGAAGGGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: NLRHREPLSISVSPEGATSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GCCAGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: ASQAVVSPLAGNLRHREPLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...AGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCCAAAGAGGGCCACACTaGAAGAGCCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSQRGPH*KSLPRQ
Trigger: CTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTG...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: EQGGSQELRIPPGRDTAPGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...GGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCACCCTCAAAGCCAGCCCCTaGGGACTGGGACCAAGACTC +
Preference number: 5 (lower is better)
Translates to: RAENSPWKRHCPLDIPPTLKASP*GLGPRL
Trigger: GAGTCTTGGTCCCAGTCCCAAGGGGCTGGCTTTGAG...GGTGGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp TGGCAATGGCAAAGTGGCGGGGTTGGTCGCCGCAGCGGTATAGGTTGCGGTCATGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: WQWQSGGVGRRSGIGCGHVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...ATGACCGCAACCTATACCGCTGCGGCGACCAACCCCGCCACTTTGCCATTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GGGGGCCACGACGGAGGCCGCCCAATGTCCACTGTGATATTGGTGAAGAGTGGTGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: GGHDGGRPMSTVILVKSGVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...ACCACTCTTCACCAATATCACAGTGGACATTGGGCGGCCTCCGTCGTGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AGCCAGGCTGTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: SQAVVSPLAGNLRHREPLLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...CAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCACAGCCTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGCCCGGAACGGGATGCTaGGGCCTGGAGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEPGTGC*GLEMGT
Trigger: TGTGCCCATCTCCAGGCCCAAGCATCCCGTTCCGGG...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp TCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTCAGGGATTGGGCCACTaGGGGTCAAGAGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SRNQARGQRYWAEAGLGVQGLGH*GSRVGD
Trigger: ATCCCCAACTCTTGACCCCAAGTGGCCCAATCCCTG...AACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp TGGAGTCAAGGATGCTTGGAGGTCCCCCACTGGGGGATCAGGGATTGGGCCACTAAACAGGGAAACCAGTaGGAGGCCACTGCAGTAGTC +
Preference number: 5 (lower is better)
Translates to: WSQGCLEVPHWGIRDWATKQGNQ*EATAVV
Trigger: GACTACTGCAGTGGCCTCCAACTGGTTTCCCTGTTT...AGTGGCCCAATCCCTGATCCCCCAGTGGGGGACCTCCAAGCATCCTTGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGAGAAGGAGCACAGCCTaGCAGACGCGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: LKLPGVARGPSEDPWKTERRSTA*QTRSSV
Trigger: GACGCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGGAGCTCAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RQATPETGPRLLACTVELSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...GAGCTCCACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCAGCTGCCGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: LGKQSPVSVLEVLHRAAAVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...GGCAGCTGCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGGCTCCTGCCTCCTCTCTCAGACAGGGAGGCGGGAACCAGACTTACTGATTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LGLLPPLSDREAGTRLTDLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...ATCAGTAAGTCTGGTTCCCGCCTCCCTGTCTGAGAGAGGAGGCAGGAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTGGTCGGGAAGGAGGGTaGACTCCAAAGAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGAGREGG*TPKRAT
Trigger: TGTGGCCCTCTTTGGAGTCAACCCTCCTTCCCGACC...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VVSPLAGNLRHREPLSISGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCATGGTGGGAAGTGGTTaGGTCATTCAGATCCCAGCG +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCMVGSG*VIQIPA
Trigger: CGCTGGGATCTGAATGACCAAACCACTTCCCACCAT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp GCACTCAGGCAGGCTACTCCTGAAACAGGACCAAGGCTCCTGGCGTGTACTGTGAAGGGAAAGCACGGATaGGGTGTGACTACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALRQATPETGPRLLACTVKGKHG*GVTTLG
Trigger: ACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTT...CACAGTACACGCCAGGAGCCTTGGTCCTGTTTCAGGAGTAGCCTGCCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS TCA 90 bp GCCCGGGCATCCGGCTGCTGGCCATGCAGGAGCACTTTATACTCATaGCTTCATTTAGTCCTTCCAGGAGCCATGGTGGGAAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: ARASGCWPCRSTLYS*LHLVLPGAMVGSGL
Trigger: CAAACCACTTCCCACCATGGCTCCTGGAAGGACTAAATGAAGTCATGAGTATAAAGTGCTCCTGCATGGCCAGCAGCCGGATGCCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPSRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTGTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LGIRPEVRDIGLRLGWGLLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...CAACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp AATCTTCGGCACCGAGAGCCTCTGTCCATTAGTGTCAGCCCCGAGGGGGCCACGGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: NLRHREPLSISVSPEGATGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...CGTGGCCCCCTCGGGGCTGACACTAATGGACAGAGGCTCTCGGTGCCGAAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CGTAAGGGAAAGCACGGATTGGGTGTGACTACTCTGGGTCTCCCACCCCCAGAACAAGAGTTGGGGATATaGGGAAGTTGCCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RKGKHGLGVTTLGLPPPEQELGI*GSCLWG
Trigger: TCCCCAGAGGCAACTTCCCAATATCCCCAACTCTTG...TTCTGGGGGTGGGAGACCCAGAGTAGTCACACCCAATCCGTGCTTTCCCTTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp AATGCCGTCCCGCTTCATGGTCAGCTTCGTGTTTTGAATCTTGGTAAACCTCTGCCGCAGCGGTATAGGTaGCGGTCATCCATGGGGACC +
Preference number: 5 (lower is better)
Translates to: NAVPLHGQLRVLNLGKPLPQRYR*RSSMGT
Trigger: GGTCCCCATGGATGACCGCAACCTATACCGCTGCGG...CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACCATGAAGCGGGACGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp ACCTCCAAGACCTGGTACCGCACTGACCCAATGCCGTCCCGCTTCATGGTCAGCGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: TSKTWYRTDPMPSRFMVSGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...GCTGACCATGAAGCGGGACGGCATTGGGTCAGTGCGGTACCAGGTCTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GGCCTGACACACCTCCAAAGTAGCCAGCATAGGGAAGCCGGAAGCCAAACTTGTATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: GLTHLQSSQHREAGSQTCIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...ACAAGTTTGGCTTCCGGCTTCCCTATGCTGGCTACTTTGGAGGTGTGTCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGAGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GGGCGTGAGATCTTCATCCCAGTCAGGGAGATCCGGTTGAAGATGTCATCATCCGGGGCGCACCAAAGCTaGCCCCCTACAATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: GREIFIPVREIRLKMSSSGAHQS*PPTMLN
Trigger: ATTCAACATTGTAGGGGGCAAGCTTTGGTGCGCCCC...GGATGATGACATCTTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CAA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGGGAGCAAGGGGGTTCCCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: LGARGFPRAENSPWKRHCLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...GCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGGGAACCCCCTTGCTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGAGCCGGAAGCCAAACTaGTCCATGGCAATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKLPGVARGPSEDPWKTESRKPN*SMAMAK
Trigger: CTTTGCCATTGCCATGGACAAGTTTGGCTTCCGGCT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GGGCGTGAGATCTTCATCCCAGTCAGGGAGATCCGGTTGAAGATGTCATCATCCTTAGGTTCGTTATGCTaGTCGCGGTCGTGCTTGATC +
Preference number: 5 (lower is better)
Translates to: GREIFIPVREIRLKMSSSLGSLC*SRSCLI
Trigger: GATCAAGCACGACCGCGACAAGCATAACGAACCTAA...GGATGATGACATCTTCAACCGGATCTCCCTGACTGGGATGAAGATCTCACGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CCAAGAGCTGAGAATTCCCCCTGGAAGAGACACTGCCCCCTAGACATACCTCCCGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: PRAENSPWKRHCPLDIPPGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...GGGAGGTATGTCTAGGGGGCAGTGTCTCTTCCAGGGGGAATTCTCAGCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGATTGGTGAAGAGTGGTaGCCGAGACACCTCCAAGAC +
Preference number: 5 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEIGEEW*PRHLQD
Trigger: GTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAAT...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GTGGTCAGTCCTCTGGCAGGCAATCTTCGGCACCGAGAGCCTCTGTCCATTAGTTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VVSPLAGNLRHREPLSISLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...ACTAATGGACAGAGGCTCTCGGTGCCGAAGATTGCCTGCCAGAGGACTGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GAAGACCCTTGGAAAACAGAGCCCAGTCTCAGTCCTGGAGGTCCTCCACAGAGCTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EDPWKTEPSLSPGGPPQSLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...GCTCTGTGGAGGACCTCCAGGACTGAGACTGGGCTCTGTTTTCCAAGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp TCTCCCACCCCCAGAAAGTTTAGCACAAGTCAGAGCAGTGTCAGGAAGCCCTTGCTGGGAGTCACCTTTTaGGAGTCAAGGATGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SPTPRKFSTSQSSVRKPLLGVTF*ESRMLG
Trigger: TCCAAGCATCCTTGACTCCAAAAAGGTGACTCCCAG...CAAGGGCTTCCTGACACTGCTCTGACTTGTGCTAAACTTTCTGGGGGTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CCTCTGAGGGTTAGGTTCGTTATGCTTGTCGCGGTCGTGCTTGATCATGCGGTAATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PLRVRFVMLVAVVLDHAVMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...TACCGCATGATCAAGCACGACCGCGACAAGCATAACGAACCTAACCCTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp ATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTACCGCACTGACATGTCCACTGTGATATaGGTGAAGAGTGGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: ILVKSGCRDTSKTWYRTDMSTVI*VKSGCR
Trigger: TCGGCAACCACTCTTCACCAATATCACAGTGGACAT...GTCAGTGCGGTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAATGTGGCTACCTCCTAAGAGATACATCCACCTCCTTCAATTTCAGAGGGGTGGGGGATATTGGGAAGTaGCCTCTGGGGAGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: KCGYLLRDTSTSFNFRGVGDIGK*PLGSKG
Trigger: CCCCTTACTCCCCAGAGGCAACTTCCCAATATCCCC...CACCCCTCTGAAATTGAAGGAGGTGGATGTATCTCTTAGGAGGTAGCCACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp TTTCAGAGGGGTGGGCACTGTCTTTCCACACCCCCTTCCCATACTGCTCAGGTCCTTGCCTTGATGACCTaGTGCTATAACTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: FQRGGHCLSTPPSHTAQVLALMT*CYNCLF
Trigger: AAAAAGGCAGTTATAGCACAAGGTCATCAAGGCAAG...GACCTGAGCAGTATGGGAAGGGGGTGTGGAAAGACAGTGCCCACCCCTCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp TCTAGGAATCAGGCCAGAGGTCAGAGATATTGGGCTGAGGCTGGGCTGGGGGTTAAACTTCTTGCTATCTaGCCACATCTACAACCAAGC +
Preference number: 5 (lower is better)
Translates to: SRNQARGQRYWAEAGLGVKLLAI*PHLQPS
Trigger: GCTTGGTTGTAGATGTGGCAAGATAGCAAGAAGTTT...AACCCCCAGCCCAGCCTCAGCCCAATATCTCTGACCTCTGGCCTGATTCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp AAAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: KAPTQVSVQCTNTSRPWGGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...GCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAGCACCCACACAAGTTTCTGTGCAATGTACAAACACAAGCCGGCCCTGGGGCTTTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KHPHKFLCNVQTQAGPGALPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...AGCCCCAGGGCCGGCTTGTGTTTGTACATTGCACAGAAACTTGTGTGGGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000497866.6
CDS-3UTR CAA 90 bp AAATGTGGCTACCTCCTAAGAGATACATCCACCTCCTTCAATTTCAGAGGGGTGGTCAGGGAGATCCGGTaGAAGATGTCATCATCCTCG +
Preference number: 5 (lower is better)
Translates to: KCGYLLRDTSTSFNFRGVVREIR*KMSSSS
Trigger: CGAGGATGATGACATCTTCAACCGGATCTCCCTGAC...CACCCCTCTGAAATTGAAGGAGGTGGATGTATCTCTTAGGAGGTAGCCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS-3UTR CAA 90 bp CTGAAACTTCCAGGTGTAGCTAGGGGGCCTAGTGAAGACCCTTGGAAAACAGAGGGTCAGCTTCGTGTTTaGAATCTTGGTAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: LKLPGVARGPSEDPWKTEGQLRV*NLGKPL
Trigger: CAGAGGTTTACCAAGATTCAAAACACGAAGCTGACC...CTCTGTTTTCCAAGGGTCTTCACTAGGCCCCCTAGCTACACCTGGAAGTTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp GTCCACTGTGATATTGGTGAAGAGTGGTTGCCGAGACACCTCCAAGACCTGGTATTGCCCCCTACAATGTaGAATGAAAAAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VHCDIGEEWLPRHLQDLVLPPTM*NEKGFP
Trigger: GGGGAAACCTTTTTCATTCAACATTGTAGGGGGCAA...TACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCAATATCACAGTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000485678.6
ENST00000497866.6
CDS-3UTR CAA 90 bp CATGGTGAAAGGGCAACAGAAGAAAAACCCCTAACATCCAGACGTGACTTTCCCTACCACTATGCTCCCTaGGACTCCATCGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: HGERATEEKPLTSRRDFPYHYAP*DSIDSF
Trigger: GAAGGAATCGATGGAGTCCAAGGGAGCATAGTGGTA...GGGAAAGTCACGTCTGGATGTTAGGGGTTTTTCTTCTGTTGCCCTTTCACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481924.2
CDS CAA 90 bp CTGCTGGCCCGGCGCTCGGGGCTCAGCAGGGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCCGGCGGCTGCGGACGGTTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: LLARRSGLSRGRRSD*GRAPGSGGCGRFRP
Trigger: GGGACGGAACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCCCCTGCTGAGCCCCGAGCGCCGGGCCAGCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372324.6
ENST00000481924.2
CDS CCA 72 bp GGCGCTCGGGGCTCAGCAGGGGACGCCGCTCCGACTTaGGCAGGGCTCCCGGCTCCGGCGGCTGCGGACGGT +
Preference number: 6 (lower is better)
Translates to: GARGSAGDAAPT*AGLPAPAAADG
Trigger: ACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCCCCTGCTGAGCCCCGAGCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CAA 90 bp CCTCTCACCCGGCGCTCGGGGCTCAGCAGGGGACGCCGCTCCGACTaGGGCAGGGCTCCCGGCTCCGGCGGCTGCGGACGGTTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: PLTRRSGLSRGRRSD*GRAPGSGGCGRFRP
Trigger: GGGACGGAACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAAGTCGGAGCGGCGTCCCCTGCTGAGCCCCGAGCGCCGGGTGAGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434555.7
CDS CCA 72 bp TCTGCTCATCCCGCAGGCGGCCACTGGCCCGCCCAGTaGGCCCGGGCATCCGGCTGCTGGCCTGGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: SAHPAGGHWPAQ*ARASGCWPGSA
Trigger: CGCGCTCCCAGGCCAGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS CCA 72 bp TCTGCTCATCCCGCAGGCGGCCACTGGCCCGCCCAGTaGGCCCGGGCATCCGGCTGCTGGCCATGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SAHPAGGHWPAQ*ARASGCWPCRS
Trigger: GCTCCTGCATGGCCAGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS CCA 72 bp TCTGCTCATCCCGCAGGCGGCCACTGGCCCGCCCAGTaGGCCCGGGCATCCGGCTGCTGGCAAACAAGGCCA +
Preference number: 6 (lower is better)
Translates to: SAHPAGGHWPAQ*ARASGCWQTRP
Trigger: TGGCCTTGTTTGCCAGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309519.8
CDS CCA 72 bp GTCGGGCGGTGTGTATCGGCCGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCGCTCCAGGGGCATGGG +
Preference number: 6 (lower is better)
Translates to: VGRCVSAAHEHA*VLPLHPLQGHG
Trigger: CCCATGCCCCTGGAGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS CAA 90 bp AGGGCACTGGGGACCTCAGGGAGCCCGGAGCTAGAGGCGGTGGCGTaGGGCCGGGAGCAGTTGCTGCTGCTGCTGCTGCTGCTAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RALGTSGSPELEAVA*GREQLLLLLLLLAA
Trigger: AGCTGCTAGCAGCAGCAGCAGCAGCAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAGCTCCGGGCTCCCTGAGGTCCCCAGTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS TCA 72 bp CTGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCCTCTGCACCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: LGCSRAVCIGRP*ARLGSPSAPAP
Trigger: TGGAGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS CCA 72 bp GCAGACATTCCCACCCTCCCTCCGGCGCAGGGGTTCTaGGTCAGGCTGGCGGCCAGGCTGAGGGGTGCGTTT +
Preference number: 6 (lower is better)
Translates to: ADIPTLPPAQGF*VRLAARLRGAF
Trigger: AAACGCACCCCTCAGCCTGGCCGCCAGCCTGACCCAGAACCCCTGCGCCGGAGGGAGGGTGGGAATGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS CCA 72 bp GTCGGGCGGTGTGTATCGGCCGCCCATGAGCACGCCTaGGTTCTCCCTCTGCACCCGCAAGACCAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: VGRCVSAAHEHA*VLPLHPQDQVA
Trigger: CGCCACCTGGTCTTGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS CAA 72 bp CCGGAGCTAGAGGCGGTGGCGTTGGGCCGGGAGCAGTaGCTGCTGCTGCTGCTGCTGCTAGCAGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: PELEAVALGREQ*LLLLLLLAAGW
Trigger: CCACCCAGCTGCTAGCAGCAGCAGCAGCAGCAGCAACTGCTCCCGGCCCAACGCCACCGCCTCTAGCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS TCA 72 bp CTGGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCATaGGCACGCCTGGGTTCTCCCTCTGCACCCGCAAGA +
Preference number: 6 (lower is better)
Translates to: LGCSRAVCIGRP*ARLGSPSAPAR
Trigger: TCTTGCGGGTGCAGAGGGAGAACCCAGGCGTGCTCATGGGCGGCCGATACACACCGCCCGACTGCACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497866.6
CDS CCA 72 bp CAGTTGCTGCTGCTGCTGCTGCTGCTAGCAGCTGGGTaGAGGGCATGGGCAGGGCCTCGGGCACTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: QLLLLLLLLAAG*RAWAGPRALKR
Trigger: CCGCTTCAGTGCCCGAGGCCCTGCCCATGCCCTCCACCCAGCTGCTAGCAGCAGCAGCAGCAGCAGCAACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS GCA 72 bp CAAAGGGTGGGCTTAGAGGTCGGACCGGCGAGCGGGTaGAGACCGTGGAGTCCCTTAGCGGGGAGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: QRVGLEVGPASG*RPWSPLAGSGD
Trigger: ATCCCCACTCCCCGCTAAGGGACTCCACGGTCTGCACCCGCTCGCCGGTCCGACCTCTAAGCCCACCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS CCA 72 bp TCCCGGTGTCTAAAGGGGATGATGACCGCCACCGTCTaGGCTGGGGTGCAGTCGGGCGGTGTGTATCGGCCG +
Preference number: 6 (lower is better)
Translates to: SRCLKGMMTATV*AGVQSGGVYRP
Trigger: CGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCATCATCCCCTTTAGACACCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CCA 72 bp GTGTCTAAAGGGGATGATGACCGCCACCGTCTGGGCTaGGGTGCAGTCGGGCGGTGTGTATCGGCCGCCCAT +
Preference number: 6 (lower is better)
Translates to: VSKGDDDRHRLG*GAVGRCVSAAH
Trigger: ATGGGCGGCCGATACACACCGCCCGACTGCACCCCAGCCCAGACGGTGGCGGTCATCATCCCCTTTAGACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
CDS CCA 72 bp GAGCGGGTGCAGACCGTGGAGTCCCTTAGCGGGGAGTaGGGATTGCATTGGAGCGCGAACTCCCCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: ERVQTVESLSGE*GLHWSANSPGR
Trigger: CCTTCCTGGGGAGTTCGCGCTCCAATGCAATCCCCACTCCCCGCTAAGGGACTCCACGGTCTGCACCCGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS CCA 72 bp GGCTTAGAGGTCGGACCGGCGAGCGGGTGCAGACCGTaGAGTCCCTTAGCGGGGAGTGGGGATTGCATTGGA +
Preference number: 6 (lower is better)
Translates to: GLEVGPASGCRP*SPLAGSGDCIG
Trigger: TCCAATGCAATCCCCACTCCCCGCTAAGGGACTCCACGGTCTGCACCCGCTCGCCGGTCCGACCTCTAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498543.1
CDS GCA 72 bp CCAGCCCCTTGGGACTGGGACCAAGACTCTGGGTCCTaGCCAGCACAGCTGGTTCTGATTCCCGGAACGGGA +
Preference number: 6 (lower is better)
Translates to: PAPWDWDQDSGS*PAQLVLIPGTG
Trigger: TCCCGTTCCGGGAATCAGAACCAGCTGTGCTGGGCAGGACCCAGAGTCTTGGTCCCAGTCCCAAGGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS CCA 72 bp AGGAAGGGGGTCTTGCCTGGGCGATGGCTCCAGCTGTaGTTCCAAGAGAGCGGCAGCCACTTCTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: RKGVLPGRWLQL*FQESGSHFWQC
Trigger: GCACTGCCAGAAGTGGCTGCCGCTCTCTTGGAACCACAGCTGGAGCCATCGCCCAGGCAAGACCCCCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS TCA 72 bp TCTCCCTCTGCACCCGCTCCAGGGGCATGGGTGAGGTaGACTCGATCAGCAGTCTGCCCACAAGACCAGGTG +
Preference number: 6 (lower is better)
Translates to: SPSAPAPGAWVR*TRSAVCPQDQV
Trigger: CACCTGGTCTTGTGGGCAGACTGCTGATCGAGTTCACCTCACCCATGCCCCTGGAGCGGGTGCAGAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
CDS CCA 72 bp TCATTCAGATCCCAGCGACAAGCAGGCCAGGCCAACTaGGACCAGGCTGGGAAGTTGCCCTCAGCATCCGGG +
Preference number: 6 (lower is better)
Translates to: SFRSQRQAGQAN*DQAGKLPSASG
Trigger: CCCGGATGCTGAGGGCAACTTCCCAGCCTGGTCCCAGTTGGCCTGGCCTGCTTGTCGCTGGGATCTGAATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS TCA 72 bp ACCAAGACTCTGGGTCCTGCCCAGCACAGCTGGTTCTaGTTCCCGGAACGGGATGCTTGGGCCTGGAGATGG +
Preference number: 6 (lower is better)
Translates to: TKTLGPAQHSWF*FPERDAWAWRW
Trigger: CCATCTCCAGGCCCAAGCATCCCGTTCCGGGAATCAGAACCAGCTGTGCTGGGCAGGACCCAGAGTCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS TCA 72 bp AGGCCAGGTGCTGGGCGTAGACGTCAAAGTAGAGGATaGCGGCCACGAGGAAGTGCAGCAGGCAGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: RPGAGRRRQSRG*RPRGSAAGREG
Trigger: TCCTTCTCTGCCTGCTGCACTTCCTCGTGGCCGTCATCCTCTACTTTGACGTCTACGCCCAGCACCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309519.8
ENST00000356836.10
ENST00000372324.6
ENST00000434555.7
ENST00000481924.2
ENST00000485678.6
ENST00000497866.6
ENST00000498543.1
CDS CCA 72 bp GGGCATCCGGCTGCTGGCAAACAAGGCCACTGCTCCTaGACTTCCACAGCCATACATCCAGACTCTCAGACA +
Preference number: 6 (lower is better)
Translates to: GHPAAGKQGHCS*TSTAIHPDSQT
Trigger: TGTCTGAGAGTCTGGATGTATGGCTGTGGAAGTCCAGGAGCAGTGGCCTTGTTTGCCAGCAGCCGGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309519.8
CDS CAA 72 bp CATTTAGTCCTTCCAGGAGCCATGGTGGGAAGTGGTTaGGTCATTCAGATCCCAGCGACAAGCAGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: HLVLPGAMVGSG*VIQIPATSRPG
Trigger: GCCTGGCCTGCTTGTCGCTGGGATCTGAATGACCAAACCACTTCCCACCATGGCTCCTGGAAGGACTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10
CDS CCA 72 bp ACTAAGTCCCACACTCACAAACAAGGCCACTGCTCCTaGACTTCCACAGCCATACATCCAGACTCTCAGACA +
Preference number: 6 (lower is better)
Translates to: TKSHTHKQGHCS*TSTAIHPDSQT
Trigger: TGTCTGAGAGTCTGGATGTATGGCTGTGGAAGTCCAGGAGCAGTGGCCTTGTTTGTGAGTGTGGGACTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356836.10