RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B4GALT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000086062

Ensembl transcript IDs: ENST00000379731.5, ENST00000535206.5

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGACATGAAAGCCGTCATCCTGGCTATGCAGAGCCCCCGCCCCTaGCAGTCAGCAGAGACCCTGTCCAGGCTGAAGGCCAGCACAGCA +
Preference number: 1 (lower is better)
Translates to: WDMKAVILAMQSPRP*QSAETLSRLKASTA
Trigger: TGCTGTGCTGGCCTTCAGCCTGGACAGGGTCTCTGCTGACTGCCAGGGGCGGGGGCTCTGCATAGCCAGGATGACGGCTTTCATGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR GCA 90 bp AGAGCCTCTGAGGGAGGTGGCCCCCACCAGAACAGAGGCTCCCTCTaGCTGGGGAGGTGCAAAGGGCTGGTAAACAACCTGACTGCTGTT +
Preference number: 1 (lower is better)
Translates to: RASEGGGPHQNRGSL*LGRCKGLVNNLTAV
Trigger: AACAGCAGTCAGGTTGTTTACCAGCCCTTTGCACCTCCCCAGGCAGAGGGAGCCTCTGTTCTGGTGGGGGCCACCTCCCTCAGAGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 90 bp AGTAGGTGCAGAGGCTTCTGTCTCCCAGGTATCCTCCCCGAGGTCTaGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCA +
Preference number: 1 (lower is better)
Translates to: SRCRGFCLPGILPEV*QDNADREALPAKGP
Trigger: TGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGAAGCCTCTGCACCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 90 bp CCAGTCACTGGGGTCAAGGTCCCCAGCTGGATTCAGCAACCAGGCTaGGTCCTTATGACTGGCCAATCCTCCTCAGGTGGCACAGCCCAC +
Preference number: 1 (lower is better)
Translates to: PVTGVKVPSWIQQPG*VLMTGQSSSGGTAH
Trigger: GTGGGCTGTGCCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAATCCAGCTGGGGACCTTGACCCCAGTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 90 bp CTGTGGGTGGGAGCCTCAACTGGGGTGGGAGCACCTGTGAAAACCTaGGGTGGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: LWVGASTGVGAPVKT*GGTGGFRHRSSWEG
Trigger: TCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCCACCTCAGGTTTTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 90 bp AGAGGTGGGTTTGTGACAGACAGCCCTGTGGGTGGGAGCCTCAACTaGGGTGGGAGCACCTGTGAAAACCTGAGGTGGAACAGGAGGCTT +
Preference number: 1 (lower is better)
Translates to: RGGFVTDSPVGGSLN*GGSTCENLRWNRRL
Trigger: AAGCCTCCTGTTCCACCTCAGGTTTTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACCCACAGGGCTGTCTGTCACAAACCCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 90 bp AGACAGCCCTGTGGGTGGGAGCCTCAACTGGGGTGGGAGCACCTGTaGAAACCTGAGGTGGAACAGGAGGCTTTAGGCACCGAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: RQPCGWEPQLGWEHL*KPEVEQEALGTEVL
Trigger: AAGAACTTCGGTGCCTAAAGCCTCCTGTTCCACCTCAGGTTTTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACCCACAGGGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 90 bp CTTGTGTCATCTCATCCCAGGTGGCTCAATAGCTCCCAACAGAGGTaGGTTTGTGACAGACAGCCCTGTGGGTGGGAGCCTCAACTGGGG +
Preference number: 1 (lower is better)
Translates to: LVSSHPRWLNSSQQR*VCDRQPCGWEPQLG
Trigger: CCCCAGTTGAGGCTCCCACCCACAGGGCTGTCTGTCACAAACCCACCTCTGTTGGGAGCTATTGAGCCACCTGGGATGAGATGACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR GCA 90 bp GGTAGTACCCTCGCCAGTACCAAGTCCTGTCTCTCCCAAGTGTCCTaGCCACTCTCCAATCCAGGGTCTAACATGGAGTTCAGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: GSTLASTKSCLSQVS*PLSNPGSNMEFRLC
Trigger: GCAGAGCCTGAACTCCATGTTAGACCCTGGATTGGAGAGTGGGCAGGACACTTGGGAGAGACAGGACTTGGTACTGGCGAGGGTACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR CCA 90 bp TCTAAAAAGCCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTaGGAACCAAGTGGGCACCCTGGGAGTAAGAGGCTCCTTGCTCCC +
Preference number: 1 (lower is better)
Translates to: SKKPPAQPLVSTNSQ*EPSGHPGSKRLLAP
Trigger: GGGAGCAAGGAGCCTCTTACTCCCAGGGTGCCCACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGGCTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR GCA 90 bp TCCTGCCCACTCTCCAATCCAGGGTCTAACATGGAGTTCAGGCTCTaGTTCCTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACC +
Preference number: 1 (lower is better)
Translates to: SCPLSNPGSNMEFRL*FLTPGDPPLLQDIT
Trigger: GGTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAACTCCATGTTAGACCCTGGATTGGAGAGTGGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR CCA 90 bp CATTTGCATACACAGGAAATCAAAATACACAGCACAACAGGTCTCTaGGACATGAAAGCCGTCATCCTGGCTATGCAGAGCCCCCGCCCC +
Preference number: 1 (lower is better)
Translates to: HLHTQEIKIHSTTGL*DMKAVILAMQSPRP
Trigger: GGGGCGGGGGCTCTGCATAGCCAGGATGACGGCTTTCATGTCCCAGAGACCTGTTGTGCTGTGTATTTTGATTTCCTGTGTATGCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 90 bp ATCTTGACTGAGTCCAGGCTTCAACTTCTCCACCTAAGCCCCACCTaGCAAAAGGACGGTTGTACCTATGTCATAGCTTTGCCACAGCCC +
Preference number: 1 (lower is better)
Translates to: ILTESRLQLLHLSPT*QKDGCTYVIALPQP
Trigger: GGGCTGTGGCAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAGTTGAAGCCTGGACTCAGTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 90 bp GGGAATGTGTTCCACGGCCACCAAATTTTGGGATGTGTACAGTTCTaGCTCTGGGGTGACACTGCGAACACATCAAGAAACCCGCAAAGG +
Preference number: 1 (lower is better)
Translates to: GNVFHGHQILGCVQF*LWGDTANTSRNPQR
Trigger: CCTTTGCGGGTTTCTTGATGTGTTCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGTGGAACACATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 90 bp TTAGCAATTCTATCACCGGGAATGTGTTCCACGGCCACCAAATTTTaGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAACACAT +
Preference number: 1 (lower is better)
Translates to: LAILSPGMCSTATKF*DVYSSDSGVTLRTH
Trigger: ATGTGTTCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGTGGAACACATTCCCGGTGATAGAATTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 90 bp TTTAACCAATACAAAGGCTTCTGGAAAAAGAACCAAGTTAGCATCTaGGATGCGCAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: FNQYKGFWKKNQVSI*DAQSSKGTDKTGAR
Trigger: CCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTGCGCATCTCAGATGCTAACTTGGTTCTTTTTCCAGAAGCCTTTGTATTGGTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR GCA 90 bp CCAAGATCAGACACAGCCCCCTACACAATGGTAAATACACACATTTaGATACACAGGAAATCAAAATACACAGCACAACAGGTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: PRSDTAPYTMVNTHI*IHRKSKYTAQQVSG
Trigger: CCCAGAGACCTGTTGTGCTGTGTATTTTGATTTCCTGTGTATGCAAATGTGTGTATTTACCATTGTGTAGGGGGCTGTGTCTGATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGGAGGCTCCCTCTGCCTaGGGAGGTGCAAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVEAPSA*GGAKGW
Trigger: CCAGCCCTTTGCACCTCCCCAGGCAGAGGGAGCCTC...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGGATGTGTACAGTTCTaGCTCTGGGGTGACACTGCG +
Preference number: 2 (lower is better)
Translates to: LPGILPEVWQDNADREALGCVQF*LWGDTA
Trigger: CGCAGTGTCACCCCAGAGTCAGAACTGTACACATCC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGACAGAGGTGGGTTTGTaGCAGACAGCCCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVTEVGL*QTALWV
Trigger: CACCCACAGGGCTGTCTGTCACAAACCCACCTCTGT...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGCTGGAGATAGGCCACTaGATGCGAGAAACCCAAGGC +
Preference number: 2 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVLEIGH*MRETQG
Trigger: GCCTTGGGTTTCTCGCATTCAGTGGCCTATCTCCAG...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp CCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTGGGAACCAAGTGGGCACCACCTAAGCCCCACCTaGCAAAAGGACGGTTGTACC +
Preference number: 2 (lower is better)
Translates to: PPAQPLVSTNSQWEPSGHHLSPT*QKDGCT
Trigger: GGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTG...GTGCCCACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR TCA 90 bp CCCAGACTCCTTAGGGGAGGACAGCATTTGTCTCGAGAACAGGTAGCCGCTGAACAGGCTGAGTCCTTATaGCTGGCCAATCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PRLLRGGQHLSREQVAAEQAESL*LANPPQ
Trigger: CTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTG...TTCAGCGGCTACCTGTTCTCGAGACAAATGCTGTCCTCCCCTAAGGAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR CCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGCACTACGTCAGCAAATaGGGGGAGCAGTATTTCCCT +
Preference number: 2 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVHYVSK*GEQYFP
Trigger: AGGGAAATACTGCTCCCCCCATTTGCTGACGTAGTG...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGAAGACATATGCACAGTaGTTGCAGTGGTTGCATACC +
Preference number: 2 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRKTYAQ*LQWLHT
Trigger: GGTATGCAACCACTGCAATCACTGTGCATATGTCTT...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp CTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACCTATCTAGCTGACTCCAGAACAGGTAGCCGCTaGAAAGCCAGTCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: LTPGDPPLLQDITYLADSRTGSR*KASHWG
Trigger: ACCCCAGTGACTGGCTTTTCAGCGGCTACCTGTTCT...GGAGTCAGCTAGATAGGTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR GCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAGGAAGTGGAGAGTTCTaGACAGTAGGTGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLGSGEF*TVGAEA
Trigger: AGCCTCTGCACCTACTGTGCAGAACTCTCCACTTCC...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp AAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTTTGCCACAGCCCTGAGTCCTTATGACTaGCCAATCCTCCTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: KPHLAKGRLYLCHSFATALSPYD*PILLRW
Trigger: CCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAG...GGCTGTGGCAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR GCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCATATGCACAGTGATTaGAGTGGTTGCATACCACTG +
Preference number: 2 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVHMHSD*SGCIPL
Trigger: CAGTGGTATGCAACCACTGCAATCACTGTGCATATG...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGTCTTTTAAGGCACTTTaGAAAAGTCAGGATCTGCGG +
Preference number: 2 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVSFKAL*KSQDLR
Trigger: CCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR TCA 90 bp CTAAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTTTGCCACAGATTCAGCAACCAGGCTaGGTCCTTATGACTGGCCAA +
Preference number: 2 (lower is better)
Translates to: LSPTWQKDGCTYVIALPQIQQPG*VLMTGQ
Trigger: TTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAAT...CTGTGGCAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR CCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATCACAGCAGAGGTCCCTaGCTAATTTCAGGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHHSRGP*LISGLL
Trigger: TAAGAGACCTGAAATTAGCCAGGGACCTCTGCTGTG...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTATCCGCCCTGCCCACCTaGGGAGGGTTGGGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVSALPT*GGLGKW
Trigger: CCACTTCCCCAACCCTCCCCAGGTGGGCAGGGCGGA...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAAGCTCCCAACAGAGGTaGGTTTGTGACAGACAGCCC +
Preference number: 2 (lower is better)
Translates to: IGYTETEKGTAHDNFAVISSQQR*VCDRQP
Trigger: GGGCTGTCTGTCACAAACCCACCTCTGTTGGGAGCT...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCATGCCGAGCCAAGTTaGGGGCAAAATATCCCACTC +
Preference number: 2 (lower is better)
Translates to: SFKALWKSQDLRTEREAFHAEPS*GQNIPL
Trigger: GAGTGGGATATTTTGCCCCCAACTTGGCTCGGCATG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR GCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCTGTTTGACCCTGAGTaGCACAGTCAAGTTTTAGGG +
Preference number: 2 (lower is better)
Translates to: SFKALWKSQDLRTEREAFLFDPE*HSQVLG
Trigger: CCCTAAAACTTGACTGTGGCACTCAGGGTCAAACAG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAATCCTCCCCGAGGTCTaGCAGGATAATGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVILPEV*QDNADR
Trigger: CCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGAT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTACGGCCACCAAATTTTaGGATGTGTACAGTTCTGAC +
Preference number: 2 (lower is better)
Translates to: KALWKSQDLRTEREAFILTATKF*DVYSSD
Trigger: GTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAAAGGCACATTCATGCTaGGGAATGGATAGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIKAHSC*GMDSLF
Trigger: AAACAGACTATCCATTCCCCAGCATGAATGTGCCTT...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAACTGAAAGAAGGGGGTaGGGGGAGGACGTAACATTA +
Preference number: 2 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVTERRG*GEDVTL
Trigger: TAATGTTACGTCCTCCCCCCACCCCCTTCTTTCAGT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR GCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAAGTGATTGCAGTGGTTaGATACCACTGAAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVSDCSG*IPLKEG
Trigger: CCCTTCTTTCAGTGGTATGCAACCACTGCAATCACT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp AAAGCCGTCATCCTGGCTATGCAGAGCCCCCGCCCCTaGCAGTCAGCAGAGACCCTGTCCAGGCTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: KAVILAMQSPRP*QSAETLSRLKA
Trigger: GGCCTTCAGCCTGGACAGGGTCTCTGCTGACTGCCAGGGGCGGGGGCTCTGCATAGCCAGGATGACGGCTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR GCA 72 bp GAGGGAGGTGGCCCCCACCAGAACAGAGGCTCCCTCTaGCTGGGGAGGTGCAAAGGGCTGGTAAACAACCTG +
Preference number: 3 (lower is better)
Translates to: EGGGPHQNRGSL*LGRCKGLVNNL
Trigger: CAGGTTGTTTACCAGCCCTTTGCACCTCCCCAGGCAGAGGGAGCCTCTGTTCTGGTGGGGGCCACCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp AGAGGCTTCTGTCTCCCAGGTATCCTCCCCGAGGTCTaGCAGGATAATGCTGACCGGGAGGCCTTACCTGCC +
Preference number: 3 (lower is better)
Translates to: RGFCLPGILPEV*QDNADREALPA
Trigger: GGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGAAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 72 bp TGTGGGTGGGAGCCTCAACTGGGGTGGGAGCACCTGTaGAAACCTGAGGTGGAACAGGAGGCTTTAGGCACC +
Preference number: 3 (lower is better)
Translates to: CGWEPQLGWEHL*KPEVEQEALGT
Trigger: GGTGCCTAAAGCCTCCTGTTCCACCTCAGGTTTTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 72 bp GGGGTCAAGGTCCCCAGCTGGATTCAGCAACCAGGCTaGGTCCTTATGACTGGCCAATCCTCCTCAGGTGGC +
Preference number: 3 (lower is better)
Translates to: GVKVPSWIQQPG*VLMTGQSSSGG
Trigger: GCCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAATCCAGCTGGGGACCTTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR CCA 72 bp CCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTaGGAACCAAGTGGGCACCCTGGGAGTAAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: PPAQPLVSTNSQ*EPSGHPGSKRL
Trigger: GAGCCTCTTACTCCCAGGGTGCCCACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR CAA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGGCCAGAGGGTGATTTaGCTCTTGAGAAAACCTGGC +
Preference number: 3 (lower is better)
Translates to: LPGILPEVWQDNADREALGQRVI*LLRKPG
Trigger: GCCAGGTTTTCTCAAGAGCAAAATCACCCTCTGGCC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 72 bp TCCCCAGCTGGATTCAGCAACCAGGCTGAGTCCTTATaGCTGGCCAATCCTCCTCAGGTGGCACAGCCCACA +
Preference number: 3 (lower is better)
Translates to: SPAGFSNQAESL*LANPPQVAQPT
Trigger: TGTGGGCTGTGCCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAATCCAGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 72 bp GGGAGGACAGCATTTGTCTCGAGAACAGGTAGCCGCTaGAAAGCCAGTCACTGGGGTCAAGGTCCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: GRTAFVSRTGSR*KASHWGQGPQL
Trigger: CAGCTGGGGACCTTGACCCCAGTGACTGGCTTTTCAGCGGCTACCTGTTCTCGAGACAAATGCTGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR CCA 72 bp TTTGTGACAGACAGCCCTGTGGGTGGGAGCCTCAACTaGGGTGGGAGCACCTGTGAAAACCTGAGGTGGAAC +
Preference number: 3 (lower is better)
Translates to: FVTDSPVGGSLN*GGSTCENLRWN
Trigger: GTTCCACCTCAGGTTTTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACCCACAGGGCTGTCTGTCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp TCTCATCCCAGGTGGCTCAATAGCTCCCAACAGAGGTaGGTTTGTGACAGACAGCCCTGTGGGTGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: SHPRWLNSSQQR*VCDRQPCGWEP
Trigger: AGGCTCCCACCCACAGGGCTGTCTGTCACAAACCCACCTCTGTTGGGAGCTATTGAGCCACCTGGGATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTGCTCTGATGCTAGAGTaGCCCTGGAATCCACACACA +
Preference number: 3 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVALMLE*PWNPHT
Trigger: TGTGTGTGGATTCCAGGGCAACTCTAGCATCAGAGC...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR GCA 72 bp CTCTCCAATCCAGGGTCTAACATGGAGTTCAGGCTCTaGTTCCTGACACCAGGGGACCCTCCTCTCCTTCAA +
Preference number: 3 (lower is better)
Translates to: LSNPGSNMEFRL*FLTPGDPPLLQ
Trigger: TTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAACTCCATGTTAGACCCTGGATTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR-3UTR CAA 90 bp CCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTGGGAACCAAGTGGGCACCTGGCAAAAGGACGGTaGTACCTATGTCATAGCTTT +
Preference number: 3 (lower is better)
Translates to: PPAQPLVSTNSQWEPSGHLAKGR*YLCHSF
Trigger: AAAGCTATGACATAGGTACAACCGTCCTTTTGCCAG...GTGCCCACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 72 bp AAATCAAAATACACAGCACAACAGGTCTCTGGGACATaGAAGCCGTCATCCTGGCTATGCAGAGCCCCCGCC +
Preference number: 3 (lower is better)
Translates to: KSKYTAQQVSGT*KPSSWLCRAPA
Trigger: GGCGGGGGCTCTGCATAGCCAGGATGACGGCTTTCATGTCCCAGAGACCTGTTGTGCTGTGTATTTTGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp CCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTaGGGGCAAAATATCCCACTCGTCCTGGTCATCTGG +
Preference number: 3 (lower is better)
Translates to: PCRAKNSHAEPS*GQNIPLVLVIW
Trigger: CCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAAGGGTGATTTTGCTCTaGAGAAAACCTGGCCTGCCA +
Preference number: 3 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLRVILL*RKPGLP
Trigger: TGGCAGGCCAGGTTTTCTCAAGAGCAAAATCACCCT...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAGAATGGATAGTCTGTTaGACCCTGAGTGCCACAGTC +
Preference number: 3 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLEWIVC*TLSATV
Trigger: GACTGTGGCACTCAGGGTCAAACAGACTATCCATTC...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAGACCAGCCCAGCAGATaGGCAGAGACACACAGCAGA +
Preference number: 3 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIDQPSR*AETHSR
Trigger: TCTGCTGTGTGTCTCTGCCAATCTGCTGGGCTGGTC...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp CCCAGCAGATTGGCAGAGACACACAGCAGAGGTCCCTaGCTAATTTCAGGTCTCTTATCCGTGTACCAAAAC +
Preference number: 3 (lower is better)
Translates to: PSRLAETHSRGP*LISGLLSVYQN
Trigger: GTTTTGGTACACGGATAAGAGACCTGAAATTAGCCAGGGACCTCTGCTGTGTGTCTCTGCCAATCTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp GAGTCCAGGCTTCAACTTCTCCACCTAAGCCCCACCTaGCAAAAGGACGGTTGTACCTATGTCATAGCTTTG +
Preference number: 3 (lower is better)
Translates to: ESRLQLLHLSPT*QKDGCTYVIAL
Trigger: CAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAGTTGAAGCCTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 72 bp CCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTaGCACTGCGAACACATCAAGAAACCCGCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: PNFGMCTVLTLG*HCEHIKKPAKA
Trigger: TGCCTTTGCGGGTTTCTTGATGTGTTCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp CTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGGATAATACCTATGTCATAGCTTaGCCACAGCCCAGACTCCTT +
Preference number: 3 (lower is better)
Translates to: LLQDITYLADSIFTPRDNTYVIA*PQPRLL
Trigger: AAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGT...ATTATCCCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR TCA 72 bp AATAGGATACACAGAAACAGAAAAGGGCACGGCACATaGCAACTTCGCGGTCATAACTCCCAGGAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: NRIHRNRKGHGT*QLRGHNSQEKE
Trigger: TTCCTTTTCCTGGGAGTTATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CCA 72 bp AGATCACTAATTAAAAGGCACATTCATGCTGGGGAATaGATAGTCTGTTTGACCCTGAGTGCCACAGTCAAG +
Preference number: 3 (lower is better)
Translates to: RSLIKRHIHAGE*IVCLTLSATVK
Trigger: CTTGACTGTGGCACTCAGGGTCAAACAGACTATCCATTCCCCAGCATGAATGTGCCTTTTAATTAGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR-3UTR CAA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTACAGAGAAATACTTTTaGCATAGTCCAGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: KALWKSQDLRTEREAFILTEKYF*HSPAAS
Trigger: AGAAGCAGCTGGACTATGCAAAAAGTATTTCTCTGT...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR TCA 72 bp TACAAAGGCTTCTGGAAAAAGAACCAAGTTAGCATCTaGGATGCGCAAAGCAGTAAAGGCACAGATAAGACT +
Preference number: 3 (lower is better)
Translates to: YKGFWKKNQVSI*DAQSSKGTDKT
Trigger: AGTCTTATCTGTGCCTTTACTGCTTTGCGCATCTCAGATGCTAACTTGGTTCTTTTTCCAGAAGCCTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTCTGGCATCGCGGCGCTaGCGCTCAGGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VWQDNADREALPAKGPEGLASRR*RSGAAP
Trigger: GGGAGCCGCTCCTGAGCGGCAGCGCCGCGATGCCAG...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGGGCGGGCGAGCGGCTaGGAGCTGAGACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPGILPEVWQDNADREALGRASG*ELRLLQ
Trigger: CTGGAGGAGTCTCAGCTCTCAGCCGCTCGCCCGCCC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCGTCATCCTGGCTATaGAGAGCCCCCGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRPSSWL*RAPAPG
Trigger: GCCAGGGGCGGGGGCTCTGCATAGCCAGGATGACGG...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACCCACCCGGGCGCGGCTaGGAGGAGGCGCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHPPGRG*EEAPRG
Trigger: TCCTCTAGGCGCCTCCTCCCAGCCGCGCCCGGGTGG...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AGGTGGCACAGCCCACACAGCCAGCACGTCTCACGCTCAAATCTCCAGGAAGATCCACCCGGGCGCGGCTaGGAGGAGGCGCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RWHSPHSQHVSRSNLQEDPPGRG*EEAPRG
Trigger: TCCTCTAGGCGCCTCCTCCCAGCCGCGCCCGGGTGG...ATCTTCCTGGAGATTTGAGCGTGAGACGTGCTGGCTGTGTGGGCTGTGCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTGCCAGAATCCACGACTaGGCTGGAGTCGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: VWQDNADREALPAKGPEGARIHD*AGVATR
Trigger: CCGGGTGGCGACTCCAGCCCAGTCGTGGATTCTGGC...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGGCAGCGACAGTGCGGTaGTGTGGGGCACTGGGACCG +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRAATVR*CGALGP
Trigger: CGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGC...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTCTGAGTCTTGGAACCTaGGCCCAGGCTGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: VWQDNADREALPAKGPEGLSLGT*AQAGPG
Trigger: GCCAGGTCCAGCCTGGGCTCAGGTTCCAAGACTCAG...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp AGTCACTGGGGTCAAGGTCCCCAGCTGGATTCAGCAACCAGGCTGAGTCCTTATCTGGCATCGCGGCGCTaGCGCTCAGGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SHWGQGPQLDSATRLSPYLASRR*RSGAAP
Trigger: GGGAGCCGCTCCTGAGCGGCAGCGCCGCGATGCCAG...ATAAGGACTCAGCCTGGTTGCTGAATCCAGCTGGGGACCTTGACCCCAGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACAGCTCCCCGGAGGACTaGCCGATGGCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHSSPED*PMAAAL
Trigger: CAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGAGCT...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AACAGTCAGTGGGAACCAAGTGGGCACCCTGGGAGTAAGAGGCTCCTTGCTCCCGCAGCGACAGTGCGGTaGTGTGGGGCACTGGGACCG +
Preference number: 4 (lower is better)
Translates to: NSQWEPSGHPGSKRLLAPAATVR*CGALGP
Trigger: CGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGC...GGGAGCAAGGAGCCTCTTACTCCCAGGGTGCCCACTTGGTTCCCACTGACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTCTCCACACTGAGGGCTaGTACCCAGGAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VWQDNADREALPAKGPEGLHTEG*YPGGQW
Trigger: CCACTGCCCTCCTGGGTACCAGCCCTCAGTGTGGAG...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AGGTGGCACAGCCCACACAGCCAGCACGTCTCACGCTCAAATCTCCAGGAAGATCCAGCCAGCCAGACCTaGGAGCGGCGAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RWHSPHSQHVSRSNLQEDPASQT*ERREAA
Trigger: GGCGGCTTCTCGCCGCTCCCAGGTCTGGCTGGCTGG...ATCTTCCTGGAGATTTGAGCGTGAGACGTGCTGGCTGTGTGGGCTGTGCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGCTGTTCGAGCCGCCCTaGAGCGGTGTGGAGACTCCG +
Preference number: 4 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVLFEPP*SGVETP
Trigger: CGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAG...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TTCAGGCTCTGCTTCCTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACCGGCGGGCAGCGACAGTaGGGTGGTGTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FRLCFLTPGDPPLLQDITGGQRQ*GGVGHW
Trigger: CCAGTGCCCCACACCACCGCACTGTCGCTGCCCGCC...GGTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp TCCACCAACAGTCAGTGGGAACCAAGTGGGCACCCTGGGAGTAAGAGGCTCCTTGCCAGAATCCACGACTaGGCTGGAGTCGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: STNSQWEPSGHPGSKRLLARIHD*AGVATR
Trigger: CCGGGTGGCGACTCCAGCCCAGTCGTGGATTCTGGC...AAGGAGCCTCTTACTCCCAGGGTGCCCACTTGGTTCCCACTGACTGTTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGGGTGGGAGCCTCAACTaGGGTGGGAGCACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRGGSLN*GGSTCE
Trigger: TTCACAGGTGCTCCCACCCCAGTTGAGGCTCCCACC...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp AAAAAGCCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTGGGAACCAAGTGGGCGGGCGAGCGGCTaGGAGCTGAGACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKPPAQPLVSTNSQWEPSGRASG*ELRLLQ
Trigger: CTGGAGGAGTCTCAGCTCTCAGCCGCTCGCCCGCCC...ACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGCCCAGGTGAGCCCATaGGAGCACTACGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LPGILPEVWQDNADREALAQVSP*EHYVSK
Trigger: TTTGCTGACGTAGTGCTCTCATGGGCTCACCTGGGC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TTCAGGCTCTGCTTCCTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACCAGGGTGACGCCAAGGTaGAGAGCGCAGACGGCCACG +
Preference number: 4 (lower is better)
Translates to: FRLCFLTPGDPPLLQDITRVTPR*RAQTAT
Trigger: CGTGGCCGTCTGCGCTCTGCACCTTGGCGTCACCCT...GGTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp CTTCTCCACCTAAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTAGCTCCCCGGAGGACTaGCCGATGGCGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLHLSPTWQKDGCTYVIASSPED*PMAAAL
Trigger: CAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGAGCT...AGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp CTGGATTCAGCAACCAGGCTGAGTCCTTATGACTGGCCAATCCTCCTCAGGTGGGAGACTCCGACCAGTTaGGGCAGGCGGCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LDSATRLSPYDWPILLRWETPTS*GRRLRS
Trigger: CGACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTC...CCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp GTTCAGGCTCTGCTTCCTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACGACAGTGCGGTGGTGTaGGGCACTGGGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: VQALLPDTRGPSSPSRHNDSAVV*GTGTEV
Trigger: GACCTCGGTCCCAGTGCCCCACACCACCGCACTGTC...GTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp CTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACCTATCTAGCTGACTCCGAGAGACGCAGTCCCTaGGGGCATAGCGGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LTPGDPPLLQDITYLADSERRSP*GHSGRP
Trigger: TGGGCGGCCGCTATGCCCCCAGGGACTGCGTCTCTC...GGAGTCAGCTAGATAGGTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAGCTCAGCCTCCACACTaGGGGCTGGTACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLAQPPH*GLVPRR
Trigger: CCTCCTGGGTACCAGCCCTCAGTGTGGAGGCTGAGC...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCAGTGGGAACCAAGTGGGCACGCTTTAAGAAGGGTGTaGGCTACAGGAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PPAQPLVSTNSQWEPSGHALRRV*ATGGEA
Trigger: CGCCTCCCCTCCTGTAGCCCACACCCTTCTTAAAGC...GTGCCCACTTGGTTCCCACTGACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp CTTCTCCACCTAAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTCGGAGGACTGCCCGATaGCGGCGGCACTGTTCGAGC +
Preference number: 4 (lower is better)
Translates to: LLHLSPTWQKDGCTYVIARRTAR*RRHCSS
Trigger: GCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCG...AGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAAATCCACGACTGGGCTaGAGTCGCCACCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRNPRLG*SRHPGA
Trigger: CGCGCCCGGGTGGCGACTCCAGCCCAGTCGTGGATT...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCCACCAACAGTCAGTGGGAACCAAGTGGGCACCCTGGGAGTAAGAGGCTCCTTGGTGGTGTGGGGCACTaGGACCGAGGTCAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: STNSQWEPSGHPGSKRLLGGVGH*DRGQVA
Trigger: AGCAACTTGACCTCGGTCCCAGTGCCCCACACCACC...AAGGAGCCTCTTACTCCCAGGGTGCCCACTTGGTTCCCACTGACTGTTGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGATCCTCCCCGAGGTCTaGCAGGATAATGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVILPEV*QDNADR
Trigger: CCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGAT...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACAACCTGAGCCCAGGCTaGACCTGGCAAAGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHNLSPG*TWQRRS
Trigger: TGAGCGCCTTTGCCAGGTCCAGCCTGGGCTCAGGTT...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTAGGAGGGCAGTGGTTTaGGGTCCGCCACGAGCACAA +
Preference number: 4 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVRRAVV*GPPRAQ
Trigger: TTGTGCTCGTGGCGGACCCCAAACCACTGCCCTCCT...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGGTTCTGACTCTGGGGTaGCACTGCGAACACATCAAG +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRVLTLG*HCEHIK
Trigger: CTTGATGTGTTCGCAGTGTCACCCCAGAGTCAGAAC...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTACAGAGGTGGGTTTGTaGCAGACAGCCCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVTEVGL*QTALWV
Trigger: CACCCACAGGGCTGTCTGTCACAAACCCACCTCTGT...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACCTGGGATTAGGCAGCTaGGTCTTGGAACCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHLGLGS*VLEPEP
Trigger: GGGCTCAGGTTCCAAGACTCAGCTGCCTAATCCCAG...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGAAAGGGCACGGCACATaGCAACTTCGCGGTCATAAC +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRKGHGT*QLRGHN
Trigger: GTTATGACCGCGAAGTTGTCATGTGCCGTGCCCTTT...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CCTCCTCTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGAATCCACGACTGGGCTaGAGTCGCCACCCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PPLLQDITYLADSIFTPRNPRLG*SRHPGA
Trigger: CGCGCCCGGGTGGCGACTCCAGCCCAGTCGTGGATT...CCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCTGCCGGTTGCGGAATaGAATGATGATGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRLPVAE*NDDGHL
Trigger: AAGGTGGCCATCATCATTCCATTCCGCAACCGGCAG...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATTACCCAGGAGGGCAGTaGTTTGGGGTCCGCCACGAG +
Preference number: 4 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHYPGGQ*FGVRHE
Trigger: CTCGTGGCGGACCCCAAACCACTGCCCTCCTGGGTA...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTGGATGTGTACAGTTCTaGCTCTGGGGTGACACTGCG +
Preference number: 4 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVGCVQF*LWGDTA
Trigger: CGCAGTGTCACCCCAGAGTCAGAACTGTACACATCC...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CAAATCTCCAGGAAGATGCTGGGACTAACCACCATGCGCTGCCACCTCCAGAGCAGAACAGGTAGCCGCTaGAAAGCCAGTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: QISRKMLGLTTMRCHLQSRTGSR*KASHWG
Trigger: ACCCCAGTGACTGGCTTTTCAGCGGCTACCTGTTCT...GCTCTGGAGGTGGCAGCGCATGGTGGTTAGTCCCAGCATCTTCCTGGAGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGGGAAGTGGAGAGTTCTaGACAGTAGGTGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVGSGEF*TVGAEA
Trigger: AGCCTCTGCACCTACTGTGCAGAACTCTCCACTTCC...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGGCCCATCTTCACATTTaGGTTCTGCTTTGCCACGAG +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRAHLHI*VLLCHE
Trigger: CTCGTGGCAAAGCAGAACCCAAATGTGAAGATGGGC...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACTTCTTGGGAGGGAGTTaGGGTGTGGGTTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHFLGGS*GVGSAE
Trigger: TTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAA...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GTCATTTCTTCCTCTAAAAAGCCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTCGAGCGGCTGAGAGCTaGGACTCCTCCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VISSSKKPPAQPLVSTNSRAAES*DSSSQP
Trigger: TGGCTGGCTGGAGGAGTCTCAGCTCTCAGCCGCTCG...ACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGGCTTTTTAGAGGAAGAAATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAGGTAGTAAACGAGGGTaGCGCCAAGGTGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRGSKRG*RQGAER
Trigger: GCGCTCTGCACCTTGGCGTCACCCTCGTTTACTACC...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp AAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTTTGCCACAGCCATGATGGCCACCTTGTaGGGAGAGACGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KPHLAKGRLYLCHSFATAMMATL*GETQSL
Trigger: CAGGGACTGCGTCTCTCCTCACAAGGTGGCCATCAT...GGCTGTGGCAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGACACCTCTGCCCTCTCTaGTCTTTCCCAAAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRHLCPL*SFPKAS
Trigger: ACTGGCCTTTGGGAAAGATCAGAGAGGGCAGAGGTG...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTGGCGGGCAGCGACAGTaGGGTGGTGTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILGGQRQ*GGVGHW
Trigger: CCAGTGCCCCACACCACCGCACTGTCGCTGCCCGCC...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTATTGAGTGGCGGATCATaGGACACCTCCCGACCACAG +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLLSGGS*DTSRPQ
Trigger: CTGTGGTCGGGAGGTGTCGCATGATCCGCCACTCAA...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGACTCTGCCTGGGGAGGTaGAAAGGGCTGGTAAACAAC +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRLCLGR*KGLVNN
Trigger: GTTGTTTACCAGCCCTTTGCACCTCCCCAGGCAGAG...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AGGTGGCACAGCCCACACAGCCAGCACGTCTCACGCTCAAATCTCCAGGAAGATCTGCCGGTTGCGGAATaGAATGATGATGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: RWHSPHSQHVSRSNLQEDLPVAE*NDDGHL
Trigger: AAGGTGGCCATCATCATTCCATTCCGCAACCGGCAG...ATCTTCCTGGAGATTTGAGCGTGAGACGTGCTGGCTGTGTGGGCTGTGCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATATCCGCCCTGCCCACCTaGGGAGGGTTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVISALPT*GGLGKW
Trigger: CCACTTCCCCAACCCTCCCCAGGTGGGCAGGGCGGA...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp GTTCAGGCTCTGCTTCCTGACACCAGGGGACCCTCCTCTCCTTCAAGACATAACTCCACCAACAGTCAGTaGGAACCAAGTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: VQALLPDTRGPSSPSRHNSTNSQ*EPSGHP
Trigger: AGGGTGCCCACTTGGTTCCCACTGACTGTTGGTGGA...GTTATGTCTTGAAGGAGAGGAGGGTCCCCTGGTGTCAGGAAGCAGAGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
3UTR CAA 72 bp GGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTGATTTaGCTCTTGAGAAAACCTGGCCTGCCAGCTAAATCA +
Preference number: 4 (lower is better)
Translates to: GRPYLPRGQRVI*LLRKPGLPAKS
Trigger: TGATTTAGCTGGCAGGCCAGGTTTTCTCAAGAGCAAAATCACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CAA 72 bp TTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATTaGTCTCGAGAACAGGTAGCCGCTGAAAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LPQPRLLRGGQH*SREQVAAEKPV
Trigger: GACTGGCTTTTCAGCGGCTACCTGTTCTCGAGACAAATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAAGCCAGTACTTGAGGTaGTCCTGCCGGTTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLSQYLR*SCRLRN
Trigger: ATTCCGCAACCGGCAGGAGCACCTCAAGTACTGGCT...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAGAGACTCCGACCAGTTaGGGCAGGCGGCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIETPTS*GRRLRS
Trigger: CGACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTC...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCGGAGGACTGCCCGATaGCGGCGGCACTGTTCGAGC +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFRRTAR*RRHCSS
Trigger: GCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGACATGCCGAGCCAAGTTaGGGGCAAAATATCCCACTC +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRHAEPS*GQNIPL
Trigger: GAGTGGGATATTTTGCCCCCAACTTGGCTCGGCATG...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CCCAGACTCCTTAGGGGAGGACAGCATTTGTCTCGAGAACAGGTAGCCGCTGAACTGAGTCCTTATGACTaGCCAATCCTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLLRGGQHLSREQVAAELSPYD*PILLRW
Trigger: CCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAG...TTCAGCGGCTACCTGTTCTCGAGACAAATGCTGTCCTCCCCTAAGGAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp AGCCAGCACGTCTCACGCTCAAATCTCCAGGAAGATGCTGGGACTAACCACCATCACCTAAGCCCCACCTaGCAAAAGGACGGTTGTACC +
Preference number: 4 (lower is better)
Translates to: SQHVSRSNLQEDAGTNHHHLSPT*QKDGCT
Trigger: GGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTG...ATGGTGGTTAGTCCCAGCATCTTCCTGGAGATTTGAGCGTGAGACGTGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCGAGCGGCTGAGAGCTaGGACTCCTCCAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFRAAES*DSSSQP
Trigger: TGGCTGGCTGGAGGAGTCTCAGCTCTCAGCCGCTCG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATCCAGCACCTGGTAGGTaGGTGAGTTCAAACCATCAG +
Preference number: 4 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHPAPGR*VSSNHQ
Trigger: CTGATGGTTTGAACTCACTCACCTACCAGGTGCTGG...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCCCAGCCTAGGGGCCTaGGGGGTCAGTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFPSLGA*GVSLRR
Trigger: CCTCCTTAGACTGACCCCTCAGGCCCCTAGGCTGGG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp GCTTTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATTTGTCTCGAGAACAGTTCACATTTGGGTTCTaGTTTGCCACGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPQPRLLRGGQHLSREQFTFGF*FATSSR
Trigger: CCTGGAGCTCGTGGCAAAGCAGAACCCAAATGTGAA...CTGTTCTCGAGACAAATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp CTTCTCCACCTAAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTAGCCAGTACTTGAGGTaGTCCTGCCGGTTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: LLHLSPTWQKDGCTYVIASQYLR*SCRLRN
Trigger: ATTCCGCAACCGGCAGGAGCACCTCAAGTACTGGCT...AGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp TGTACCTATGTCATAGCTTTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATATGGAGTTCAGGCTCTaGTTCCTGACACCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CTYVIALPQPRLLRGGQHMEFRL*FLTPGD
Trigger: GTCCCCTGGTGTCAGGAAGCAGAGCCTGAACTCCAT...ATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTCGCCCTGCAGCGGTGTaGAGACTCCGACCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILRPAAV*RLRPVG
Trigger: CCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCG...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTATGTCCACTGTGATTTaGGTATACAATGGGTATCTC +
Preference number: 4 (lower is better)
Translates to: VWQDNADREALPAKGPEGMSTVI*VYNGYL
Trigger: GAGATACCCATTGTATACCCAAATCACAGTGGACAT...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCGAGGCTCCCTCTGCCTaGGGAGGTGCAAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFEAPSA*GGAKGW
Trigger: CCAGCCCTTTGCACCTCCCCAGGCAGAGGGAGCCTC...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATGAGGGAGTTGGGGTGTaGGTTCGGCTGAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHEGVGV*VRLNFF
Trigger: AAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTC...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCGGCCTAACTGTGCCCTaGCTGTGCCTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFGLTVP*LCLGPR
Trigger: CCTGGGCCCAAGGCACAGCCAGGGCACAGTTAGGCC...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
3UTR CAA 72 bp ACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTTaGCCACAGCCCAGACTCCTTAGGGGAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: TWQKDGCTYVIA*PQPRLLRGGQH
Trigger: ATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGTACAACCGTCCTTTTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTACACCTGGTAGGTGAGTaGGTTCAAACCATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLHLVGE*VQTIRE
Trigger: CTCTCTGATGGTTTGAACTCACTCACCTACCAGGTG...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGATCCCGATGTCCACTGTaGTTTGGGTATACAATGGGT +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRSRCPL*FGYTMG
Trigger: ACCCATTGTATACCCAAATCACAGTGGACATCGGGA...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTAAGACATATGCACAGTaGTTGCAGTGGTTGCATACC +
Preference number: 4 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVKTYAQ*LQWLHT
Trigger: GGTATGCAACCACTGCAATCACTGTGCATATGTCTT...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCTCAGGGCATTTGTCTaGTTTCTTTTAAGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRLRAFV*FLLRHF
Trigger: AAAGTGCCTTAAAAGAAATCAGACAAATGCCCTGAG...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CTGGATTCAGCAACCAGGCTGAGTCCTTATGACTGGCCAATCCTCCTCAGGTGGCATAACCTATCTAGCTaGCTCCATTTTCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LDSATRLSPYDWPILLRWHNLSS*LHFHPQ
Trigger: CTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATG...CCACCTGAGGAGGATTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp TGTACCTATGTCATAGCTTTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATATTTGGGTTCTGCTTTaGCACGAGCTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CTYVIALPQPRLLRGGQHIWVLL*HELQVH
Trigger: GTGGACCTGGAGCTCGTGGCAAAGCAGAACCCAAAT...ATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGATACTTGAGGTGCTCCTaGCGGTTGCGGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRYLRCS*RLRNGM
Trigger: CATTCCATTCCGCAACCGGCAGGAGCACCTCAAGTA...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TGTACCTATGTCATAGCTTTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATTACTTGAGGTGCTCCTaGCGGTTGCGGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: CTYVIALPQPRLLRGGQHYLRCS*RLRNGM
Trigger: CATTCCATTCCGCAACCGGCAGGAGCACCTCAAGTA...ATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAGGTGGTGTGGGGCACTaGGACCGAGGTCAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIGGVGH*DRGQVA
Trigger: AGCAACTTGACCTCGGTCCCAGTGCCCCACACCACC...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGACCCGACCACAGCATTTaGGCGAGATATAGACATGCC +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRPDHSI*ARYRHA
Trigger: GGCATGTCTATATCTCGCCCAAATGCTGTGGTCGGG...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATACCACCTGGGGAGGGTTaGGGAAGTGGAGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIPPGEG*GSGEFC
Trigger: GCAGAACTCTCCACTTCCCCAACCCTCCCCAGGTGG...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTATCCTTCAAGGCTTCTTaGAAGCCAACATTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLSFKAS*KPTLRS
Trigger: GCTCCTCAATGTTGGCTTTCAAGAAGCCTTGAAGGA...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGAATTTTTCTTGTCTCTTaGGTGGCGGATCATGCGACA +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRIFLVS*VADHAT
Trigger: TGTCGCATGATCCGCCACTCAAGAGACAAGAAAAAT...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACATTCGGTCAAACCTCTaGGGATTGGGTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHIRSNL*GLGSFF
Trigger: GAAAAATGAACCCAATCCTCAGAGGTTTGACCGAAT...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp GGAACAGGAGGCTTTAGGCACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTAACCAAGTTAGCATCTaGGATGCGCAAAGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GTGGFRHRSSWEGVGVWVNQVSI*DAQSSK
Trigger: TTTACTGCTTTGCGCATCTCAGATGCTAACTTGGTT...AACCCACACCCCAACTCCCTCCCAAGAACTTCGGTGCCTAAAGCCTCCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGATGTCTCCTTTGTGTGTaGAATTCGGTCAAACCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRCLLCV*NSVKPL
Trigger: CAGAGGTTTGACCGAATTGCACACACAAAGGAGACA...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAGCTTTAAGAAGGGTGTaGGCTACAGGAGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIALRRV*ATGGEA
Trigger: CGCCTCCCCTCCTGTAGCCCACACCCTTCTTAAAGC...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TGTACCTATGTCATAGCTTTGCCACAGCCCAGACTCCTTAGGGGAGGACAGCATGCCCATCTTCACATTTaGGTTCTGCTTTGCCACGAG +
Preference number: 4 (lower is better)
Translates to: CTYVIALPQPRLLRGGQHAHLHI*VLLCHE
Trigger: CTCGTGGCAAAGCAGAACCCAAATGTGAAGATGGGC...ATGCTGTCCTCCCCTAAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CCA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGGATTTGGGTATACAATaGGTATCTCTGTACATCCAG +
Preference number: 4 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVDLGIQ*VSLYIQ
Trigger: CTGGATGTACAGAGATACCCATTGTATACCCAAATC...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAACTGAAAGAAGGGGGTaGGGGGAGGACGTAACATTA +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRTERRG*GEDVTL
Trigger: TAATGTTACGTCCTCCCCCCACCCCCTTCTTTCAGT...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTATGATGGCCACCTTGTaGGGAGAGACGCAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILMMATL*GETQSL
Trigger: CAGGGACTGCGTCTCTCCTCACAAGGTGGCCATCAT...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp CCTCCTCTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGATTCAGCAACCAGGCTaGGTCCTTATGACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PPLLQDITYLADSIFTPRIQQPG*VLMTGQ
Trigger: TTGGCCAGTCATAAGGACTCAGCCTGGTTGCTGAAT...CCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAGAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR GCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATATTGCAACGGAAATGTaGCGTGGCTGTGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHIATEM*RGCEKH
Trigger: GTGTTTTTCACAGCCACGGCACATTTCCGTTGCAAT...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTACATATGCACAGTGATTaGAGTGGTTGCATACCACTG +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLHMHSD*SGCIPL
Trigger: CAGTGGTATGCAACCACTGCAATCACTGTGCATATG...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAGAGAGACGCAGTCCCTaGGGGCATAGCGGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVERRSP*GHSGRP
Trigger: TGGGCGGCCGCTATGCCCCCAGGGACTGCGTCTCTC...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTCTGGAGATAGGCCACTaGATGCGAGAAACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILLEIGH*MRETQG
Trigger: GCCTTGGGTTTCTCGCATTCAGTGGCCTATCTCCAG...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAGCACCTGTGAAAACCTaGGGTGGAACAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIAPVKT*GGTGGF
Trigger: AAAGCCTCCTGTTCCACCTCAGGTTTTCACAGGTGC...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAAGGGTGACGCCAAGGTaGAGAGCGCAGACGGCCACG +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVRVTPR*RAQTAT
Trigger: CGTGGCCGTCTGCGCTCTGCACCTTGGCGTCACCCT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAATTTGGGTTCTGCTTTaGCACGAGCTCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIIWVLL*HELQVH
Trigger: GTGGACCTGGAGCTCGTGGCAAAGCAGAACCCAAAT...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAAGTGATTGCAGTGGTTaGATACCACTGAAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRSDCSG*IPLKEG
Trigger: CCCTTCTTTCAGTGGTATGCAACCACTGCAATCACT...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAGACAGTGCGGTGGTGTaGGGCACTGGGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVDSAVV*GTGTEV
Trigger: GACCTCGGTCCCAGTGCCCCACACCACCGCACTGTC...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATCACCTGTACGCATTATaGTCATTCATTGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHHLYAL*SFIGMR
Trigger: CCTCATTCCAATGAATGACCATAATGCGTACAGGTG...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp GTCATTTCTTCCTCTAAAAAGCCTCCAGCTCAGCCCCTAGTTTCCACCAACAGTATCCAGGGTCTAACATaGAGTTCAGGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VISSSKKPPAQPLVSTNSIQGLT*SSGSAS
Trigger: GGAAGCAGAGCCTGAACTCCATGTTAGACCCTGGAT...ACTGTTGGTGGAAACTAGGGGCTGAGCTGGAGGCTTTTTAGAGGAAGAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGGATAATAATATAGCCAGTACTTaGGGTGCTCCTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQDITYLADSIFTPRDNNIAST*GAPAGC
Trigger: GCAACCGGCAGGAGCACCTCAAGTACTGGCTATATT...ATTATCCCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR TCA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTATATAGAGTGGGGAACTaGCAGAGAAATACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLYRVGN*QRNTFC
Trigger: GCAAAAAGTATTTCTCTGTCAGTTCCCCACTCTATA...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATATTCTTGTCTCTTGAGTaGCGGATCATGCGACACCTC +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIFLSLE*RIMRHL
Trigger: GAGGTGTCGCATGATCCGCCACTCAAGAGACAAGAA...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATACACTACGTCAGCAAATaGGGGGAGCAGTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIHYVSK*GEQYFP
Trigger: AGGGAAATACTGCTCCCCCCATTTGCTGACGTAGTG...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAAATGTGCCGTGGCTGTaGAAAACACCTGTACGCATT +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVINVPWL*KTPVRI
Trigger: AATGCGTACAGGTGTTTTTCACAGCCACGGCACATT...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTTTCACATTTGGGTTCTaGTTTGCCACGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILFTFGF*FATSSR
Trigger: CCTGGAGCTCGTGGCAAAGCAGAACCCAAATGTGAA...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAATTATGGTCATTCATTaGAATGAGGTCCACGTCACT +
Preference number: 4 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRIMVIH*NEVHVT
Trigger: AGTGACGTGGACCTCATTCCAATGAATGACCATAAT...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAATATCCCACTCGTCCTaGTCATCTGGAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIISHSS*SSGKPS
Trigger: AGATGGCTTTCCAGATGACCAGGACGAGTGGGATAT...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp AAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCATTCTTTCATCTCATCCCAGGTaGCTCAATAGCTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: KALWKSQDLRTEREAFILSSHPR*LNSSQQ
Trigger: CTGTTGGGAGCTATTGAGCCACCTGGGATGAGATGA...AAGAATGAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCACAGCAGAGGTCCCTaGCTAATTTCAGGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFHSRGP*LISGLL
Trigger: TAAGAGACCTGAAATTAGCCAGGGACCTCTGCTGTG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAATTCATGCTGGGGAATaGATAGTCTGTTTGACCCTG +
Preference number: 4 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIIHAGE*IVCLTL
Trigger: CAGGGTCAAACAGACTATCCATTCCCCAGCATGAAT...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAAGCTCCCAACAGAGGTaGGTTTGTGACAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVSSQQR*VCDRQP
Trigger: GGGCTGTCTGTCACAAACCCACCTCTGTTGGGAGCT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAAATATAGCCAGTACTTaGGGTGCTCCTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVNIAST*GAPAGC
Trigger: GCAACCGGCAGGAGCACCTCAAGTACTGGCTATATT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAGTTCTGCACAGTAGGTaGAGAGGCTTCTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVVLHSR*RGFCLP
Trigger: TGGGAGACAGAAGCCTCTGCACCTACTGTGCAGAAC...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCTCTTTTAAGGCACTTTaGAAAAGTCAGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFSFKAL*KSQDLR
Trigger: CCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCAATACAGTTCTGTTTTaGACACCAAGATCAGACACA +
Preference number: 4 (lower is better)
Translates to: SFKALWKSQDLRTEREAFNTVLF*TPRSDT
Trigger: TGTGTCTGATCTTGGTGTTCAAAACAGAACTGTATT...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR GCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTATCCAAACTTATCCATTaGAACGGAAATGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVSKLIH*NGNVPW
Trigger: CCACGGCACATTTCCGTTGCAATGGATAAGTTTGGA...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR TCA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAGAACATAAGGTAGGCTaGATCCAAACTTATCCATTG +
Preference number: 4 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVEHKVG*IQTYPL
Trigger: CAATGGATAAGTTTGGATTCAGCCTACCTTATGTTC...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS GCA 90 bp GGAGGCGGCGGCCGGGCCCCTCCGGTCCGGAGCTCCCCGGAGGACTaGCCGATGGCGGCGGCACTGTTCGAGCCGCCCTGCAGCGGTGTG +
Preference number: 5 (lower is better)
Translates to: GGGGRAPPVRSSPED*PMAAALFEPPCSGV
Trigger: CACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGAGCTCCGGACCGGAGGGGCCCGGCCGCCGCCTCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS GCA 90 bp GCAGGCGGCAGGCCCGCTGTAGGGACGCGCCTGGCATCGCGGCGCTaGCGCTCAGGAGCGGCTCCCGAAGCCTCATCTTCCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: AGGRPAVGTRLASRR*RSGAAPEASSSRRR
Trigger: GCGGCGGCGGGAAGATGAGGCTTCGGGAGCCGCTCCTGAGCGGCAGCGCCGCGATGCCAGGCGCGTCCCTACAGCGGGCCTGCCGCCTGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 90 bp GCGGCCGGGCCCCTCCGGTCCGGAGCTCCCCGGAGGACTGCCCGATaGCGGCGGCACTGTTCGAGCCGCCCTGCAGCGGTGTGGAGACTC +
Preference number: 5 (lower is better)
Translates to: AAGPLRSGAPRRTAR*RRHCSSRPAAVWRL
Trigger: GAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGAGCTCCGGACCGGAGGGGCCCGGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 90 bp CGGCTCCCGAAGCCTCATCTTCCCGCCGCCGCTTTAAGAAGGGTGTaGGCTACAGGAGGGGAGGCGACCCGCCCGCGGGCCGCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: RLPKPHLPAAALRRV*ATGGEATRPRAARQ
Trigger: CTGGCGGGCGGCCCGCGGGCGGGTCGCCTCCCCTCCTGTAGCCCACACCCTTCTTAAAGCGGCGGCGGGAAGATGAGGCTTCGGGAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS GCA 90 bp TCCCCGGAGGACTGCCCGATGGCGGCGGCACTGTTCGAGCCGCCCTaGAGCGGTGTGGAGACTCCGACCAGTTGGGGCAGGCGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SPEDCPMAAALFEPP*SGVETPTSWGRRLR
Trigger: CCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 90 bp ACTGCCCGATGGCGGCGGCACTGTTCGAGCCGCCCTGCAGCGGTGTaGAGACTCCGACCAGTTGGGGCAGGCGGCTCAGGTCGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: TARWRRHCSSRPAAV*RLRPVGAGGSGRGQ
Trigger: CTGGCCGCGACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS TCA 90 bp GGGGCAGGCGGCTCAGGTCGCGGCCAGCCAGGTAGTAAACGAGGGTaGCGCCAAGGTGCAGAGCGCAGACGGCCACGAGCAGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: GAGGSGRGQPGSKRG*RQGAERRRPRAGGR
Trigger: CCTGCCGCCTGCTCGTGGCCGTCTGCGCTCTGCACCTTGGCGTCACCCTCGTTTACTACCTGGCTGGCCGCGACCTGAGCCGCCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 90 bp CTCCTCAGGGCAGGCGGGCAGCGACAGTGCGGTGGTGTGGGGCACTaGGACCGAGGTCAAGTTGCTAGCGGGGCCAGGGCCAGAATCCAC +
Preference number: 5 (lower is better)
Translates to: LLRAGGQRQCGGVGH*DRGQVASGARARIH
Trigger: GTGGATTCTGGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGCCCGCCTGCCCTGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS-3UTR CAA 90 bp TCTGTCTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGGGAGACTCCGACCAGTaGGGGCAGGCGGCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: SVSQVSSPRSGRIMLTGRGDSDQ*GQAAQV
Trigger: GACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCC...CCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGGGACCGAGGTCAAGTaGCTAGCGGGGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LPGILPEVWQDNADREALGTEVK*LAGPGP
Trigger: TGGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CAGGAAGATGCTGGGACTAACCACCATGCGCTGCCACCTCCAGAGCAGAACAGAGGGACCGAGGTCAAGTaGCTAGCGGGGCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: QEDAGTNHHALPPPEQNRGTEVK*LAGPGP
Trigger: TGGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCC...TCTGTTCTGCTCTGGAGGTGGCAGCGCATGGTGGTTAGTCCCAGCATCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CAA 90 bp GAAACAGGACCCGCGGCATCTCACGGACCAGGCAAACATCCAGGCCTAACTGTGCAGGAGGGCAGTGGTTaGGGGTCCGCCACGAGCACA +
Preference number: 5 (lower is better)
Translates to: ETGPAASHGPGKHPGLTVQEGSG*GSATST
Trigger: TGTGCTCGTGGCGGACCCCAAACCACTGCCCTCCTG...CACAGTTAGGCCTGGATGTTTGCCTGGTCCGTGAGATGCCGCGGGTCCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTCATTTGGGTTCTGCTTaGCCACGAGCTCCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: VWQDNADREALPAKGPEGHLGSA*PRAPGP
Trigger: TGGACCTGGAGCTCGTGGCAAAGCAGAACCCAAATG...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp GTCTGGCAGGATAATGCTGACCGGGAGGCCTTACCTGCCAAGGGGCCAGAGGGTACATGCCGAGCCAAGTaGGGGGCAAAATATCCCACT +
Preference number: 5 (lower is better)
Translates to: VWQDNADREALPAKGPEGTCRAK*GAKYPT
Trigger: AGTGGGATATTTTGCCCCCAACTTGGCTCGGCATGT...ACCCTCTGGCCCCTTGGCAGGTAAGGCCTCCCGGTCAGCATTATCCTGCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS GCA 90 bp CACGCTCAAATCTCCAGGAAGATGCTGGGACTAACCACCATGCGCTaGCACCTCCAGAGCAGAACAGACCAGGCGAAGCCTTCACCACAG +
Preference number: 5 (lower is better)
Translates to: HAQISRKMLGLTTMR*HLQSRTDQAKPSPQ
Trigger: CTGTGGTGAAGGCTTCGCCTGGTCTGTTCTGCTCTGGAGGTGGCAGCGCATGGTGGTTAGTCCCAGCATCTTCCTGGAGATTTGAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS CCA 90 bp AGAGACGCAGTCCCTGGGGGCATAGCGGCCGCCCATCTTCACATTTaGGTTCTGCTTTGCCACGAGCTCCAGGTCCACAGGCATGTTAAA +
Preference number: 5 (lower is better)
Translates to: RDAVPGGIAAAHLHI*VLLCHELQVHRHVK
Trigger: TTTAACATGCCTGTGGACCTGGAGCTCGTGGCAAAGCAGAACCCAAATGTGAAGATGGGCGGCCGCTATGCCCCCAGGGACTGCGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS-3UTR CAA 90 bp CAAAGCAGTAAAGGCACAGATAAGACTGGGGCCAGGCACCAGCTCAGCCTCCACAGGTGCTCCTGCCGGTaGCGGAATGGAATGATGATG +
Preference number: 5 (lower is better)
Translates to: QSSKGTDKTGARHQLSLHRCSCR*RNGMMM
Trigger: CATCATCATTCCATTCCGCAACCGGCAGGAGCACCT...GTGGAGGCTGAGCTGGTGCCTGGCCCCAGTCTTATCTGTGCCTTTACTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CTCCCAGGTATCCTCCCCGAGGTCTGGCAGGATAATGCTGACCGGGAGGCCTTAGAATGGATAGTCTGTTaGACCCTGAGTGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: LPGILPEVWQDNADREALEWIVC*TLSATV
Trigger: GACTGTGGCACTCAGGGTCAAACAGACTATCCATTC...TAAGGCCTCCCGGTCAGCATTATCCTGCCAGACCTCGGGGAGGATACCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CCCAGACTCCTTAGGGGAGGACAGCATTTGTCTCGAGAACAGGTAGCCGCTGAAAGGTGCTCCTGCCGGTaGCGGAATGGAATGATGATG +
Preference number: 5 (lower is better)
Translates to: PRLLRGGQHLSREQVAAERCSCR*RNGMMM
Trigger: CATCATCATTCCATTCCGCAACCGGCAGGAGCACCT...TTCAGCGGCTACCTGTTCTCGAGACAAATGCTGTCCTCCCCTAAGGAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS CCA 90 bp AGGGACCAGCCCAGCAGATTGGCAGAGACACACAGCAGAGGTCCCTaGCTAATTTCAGGTCTCTTATCCGTGTACCAAAACGCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: RDQPSRLAETHSRGP*LISGLLSVYQNASS
Trigger: CGAGCTAGCGTTTTGGTACACGGATAAGAGACCTGAAATTAGCCAGGGACCTCTGCTGTGTGTCTCTGCCAATCTGCTGGGCTGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGGATAATGGAGACTCCGACCAGTaGGGGCAGGCGGCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: LLQDITYLADSIFTPRDNGDSDQ*GQAAQV
Trigger: GACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCC...ATTATCCCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CAA 90 bp CGAAGGGGACCTGTCACTCAGACTGGTAAAAATGAGAGGGACCAGCCCAGCAGAAGGGTGATTTTGCTCTaGAGAAAACCTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: RRGPVTQTGKNERDQPSRRVILL*RKPGLP
Trigger: TGGCAGGCCAGGTTTTCTCAAGAGCAAAATCACCCT...TCTGCTGGGCTGGTCCCTCTCATTTTTACCAGTCTGAGTGACAGGTCCCCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAGCTCTGATGCTAGAGTaGCCCTGGAATCCACACACA +
Preference number: 5 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRALMLE*PWNPHT
Trigger: TGTGTGTGGATTCCAGGGCAACTCTAGCATCAGAGC...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp ACGGCCACCAAATTTTGGGATGTGTACAGTTCTGACTCTGGGGTGACACTGCGAGGCCAGAGGGTGATTTaGCTCTTGAGAAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: TATKFWDVYSSDSGVTLRGQRVI*LLRKPG
Trigger: GCCAGGTTTTCTCAAGAGCAAAATCACCCTCTGGCC...TCGCAGTGTCACCCCAGAGTCAGAACTGTACACATCCCAAAATTTGGTGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 90 bp AATTCGGTCAAACCTCTGAGGATTGGGTTCATTTTTCTTGTCTCTTaGGTGGCGGATCATGCGACACCTCCCGACCACAGCATTTGGGCG +
Preference number: 5 (lower is better)
Translates to: NSVKPLRIGFIFLVS*VADHATPPDHSIWA
Trigger: CGCCCAAATGCTGTGGTCGGGAGGTGTCGCATGATCCGCCACTCAAGAGACAAGAAAAATGAACCCAATCCTCAGAGGTTTGACCGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp ATAGGATACACAGAAACAGAAAAGGGCACGGCACATGACAACTTCGCGGTCATAGACCAGCCCAGCAGATaGGCAGAGACACACAGCAGA +
Preference number: 5 (lower is better)
Translates to: IGYTETEKGTAHDNFAVIDQPSR*AETHSR
Trigger: TCTGCTGTGTGTCTCTGCCAATCTGCTGGGCTGGTC...TATGACCGCGAAGTTGTCATGTGCCGTGCCCTTTTCTGTTTCTGTGTATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CTTCTCCACCTAAGCCCCACCTGGCAAAAGGACGGTTGTACCTATGTCATAGCTACCTATGTCATAGCTTaGCCACAGCCCAGACTCCTT +
Preference number: 5 (lower is better)
Translates to: LLHLSPTWQKDGCTYVIATYVIA*PQPRLL
Trigger: AAGGAGTCTGGGCTGTGGCAAAGCTATGACATAGGT...AGCTATGACATAGGTACAACCGTCCTTTTGCCAGGTGGGGCTTAGGTGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CAA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAAGAGCATTGTCTCCTTaGTGTGTGCAATTCGGTCAA +
Preference number: 5 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLRALSP*CVQFGQ
Trigger: TTGACCGAATTGCACACACAAAGGAGACAATGCTCT...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATAACCATCAGAGAGCATaGTCTCCTTTGTGTGTGCAA +
Preference number: 5 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHNHQRA*SPLCVQ
Trigger: TTGCACACACAAAGGAGACAATGCTCTCTGATGGTT...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 90 bp TTATCCGTGTACCAAAACGCTAGCTCGGTGTCCCGATGTCCACTGTaGTTTGGGTATACAATGGGTATCTCTGTACATCCAGCACCTGGT +
Preference number: 5 (lower is better)
Translates to: LSVYQNASSVSRCPL*FGYTMGISVHPAPG
Trigger: ACCAGGTGCTGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACATCGGGACACCGAGCTAGCGTTTTGGTACACGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CACCGAAGTTCTTGGGAGGGAGTTGGGGTGTGGGTTCGGCTGAACTTCTTTCTAGATGTCCACTGTGATTaGGGTATACAATGGGTATCT +
Preference number: 5 (lower is better)
Translates to: HRSSWEGVGVWVRLNFFLDVHCD*GIQWVS
Trigger: AGATACCCATTGTATACCCAAATCACAGTGGACATC...TAGAAAGAAGTTCAGCCGAACCCACACCCCAACTCCCTCCCAAGAACTTCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CCA 90 bp GCAACGGAAATGTGCCGTGGCTGTGAAAAACACCTGTACGCATTATaGTCATTCATTGGAATGAGGTCCACGTCACTAAACACAAAGCAG +
Preference number: 5 (lower is better)
Translates to: ATEMCRGCEKHLYAL*SFIGMRSTSLNTKQ
Trigger: CTGCTTTGTGTTTAGTGACGTGGACCTCATTCCAATGAATGACCATAATGCGTACAGGTGTTTTTCACAGCCACGGCACATTTCCGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCAGGAGCTTAGCACGATaGAATATAGTGTCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SFKALWKSQDLRTEREAFRSLAR*NIVSPA
Trigger: GGCGGGAGACACTATATTCAATCGTGCTAAGCTCCT...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAGTCCTTCAAGGCTTCTaGAAAGCCAACATTGAGGAG +
Preference number: 5 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIVLQGF*KANIEE
Trigger: CTCCTCAATGTTGGCTTTCAAGAAGCCTTGAAGGAC...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CGAGCCAAGTTGGGGGCAAAATATCCCACTCGTCCTGGTCATCTGGAAAGCCATAAATACAGTTCTGTTTaGAACACCAAGATCAGACAC +
Preference number: 5 (lower is better)
Translates to: RAKLGAKYPTRPGHLESHKYSSV*NTKIRH
Trigger: GTGTCTGATCTTGGTGTTCAAAACAGAACTGTATTT...ATGGCTTTCCAGATGACCAGGACGAGTGGGATATTTTGCCCCCAACTTGGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 90 bp GGTATACAATGGGTATCTCTGTACATCCAGCACCTGGTAGGTGAGTaGGTTCAAACCATCAGAGAGCATTGTCTCCTTTGTGTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: GIQWVSLYIQHLVGE*VQTIREHCLLCVCN
Trigger: ATTGCACACACAAAGGAGACAATGCTCTCTGATGGTTTGAACTCACTCACCTACCAGGTGCTGGATGTACAGAGATACCCATTGTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp TCTTTTAAGGCACTTTGGAAAAGTCAGGATCTGCGGACAGAAAGAGAGGCTTTCCATTTTTCTTGTCTCTaGAGTGGCGGATCATGCGAC +
Preference number: 5 (lower is better)
Translates to: SFKALWKSQDLRTEREAFHFSCL*SGGSCD
Trigger: GTCGCATGATCCGCCACTCAAGAGACAAGAAAAATG...GAAAGCCTCTCTTTCTGTCCGCAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp AAACACCTTGCAGAGCTAAGAATTCACATGCCGAGCCAAGTTGGGGGCAAAATAGGAGCAGTATTTCCCTaGGTTCTAAGAATGAACCAC +
Preference number: 5 (lower is better)
Translates to: KHLAELRIHMPSQVGGKIGAVFP*VLRMNH
Trigger: GTGGTTCATTCTTAGAACCAAGGGAAATACTGCTCC...TATTTTGCCCCCAACTTGGCTCGGCATGTGAATTCTTAGCTCTGCAAGGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 90 bp GCTGAATCCAAACTTATCCATTGCAACGGAAATGTGCCGTGGCTGTaGAAAACACCTGTACGCATTATGGTCATTCATTGGAATGAGGTC +
Preference number: 5 (lower is better)
Translates to: AESKLIHCNGNVPWL*KTPVRIMVIHWNEV
Trigger: GACCTCATTCCAATGAATGACCATAATGCGTACAGGTGTTTTTCACAGCCACGGCACATTTCCGTTGCAATGGATAAGTTTGGATTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp CTCCTTCAAGACATAACCTATCTAGCTGACTCCATTTTCACCCCCAGGGATAATCTGGCAAAAGGACGGTaGTACCTATGTCATAGCTTT +
Preference number: 5 (lower is better)
Translates to: LLQDITYLADSIFTPRDNLAKGR*YLCHSF
Trigger: AAAGCTATGACATAGGTACAACCGTCCTTTTGCCAG...ATTATCCCTGGGGGTGAAAATGGAGTCAGCTAGATAGGTTATGTCTTGAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS-3UTR CAA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTAATCCAAACTTATCCATaGCAACGGAAATGTGCCGTG +
Preference number: 5 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVIQTYP*QRKCAV
Trigger: CACGGCACATTTCCGTTGCAATGGATAAGTTTGGAT...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS-3UTR CAA 90 bp TCCCACAACTCCCTCTCAATGCAGTCATTTCTAGTTTTAATAATATCCTTGGTATTGGGTTCATTTTTCTaGTCTCTTGAGTGGCGGATC +
Preference number: 5 (lower is better)
Translates to: SHNSLSMQSFLVLIISLVLGSFF*SLEWRI
Trigger: GATCCGCCACTCAAGAGACAAGAAAAATGAACCCAA...TACCAAGGATATTATTAAAACTAGAAATGACTGCATTGAGAGGGAGTTGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 72 bp AGGGCCCGGAGCGGGGGCGGGCGAGCGGCTGAGAGCTaGGACTCCTCCAGCCAGCCAGACCTGGGAGCGGCG +
Preference number: 6 (lower is better)
Translates to: RARSGGGRAAES*DSSSQPDLGAA
Trigger: CGCCGCTCCCAGGTCTGGCTGGCTGGAGGAGTCTCAGCTCTCAGCCGCTCGCCCGCCCCCGCTCCGGGCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535206.5
CDS CCA 72 bp CCCCTCCGGTCCGGAGCTCCCCGGAGGACTGCCCGATaGCGGCGGCACTGTTCGAGCCGCCCTGCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: PLRSGAPRRTAR*RRHCSSRPAAV
Trigger: CACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGTCCTCCGGGGAGCTCCGGACCGGAGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS GCA 72 bp AGGCCCGCTGTAGGGACGCGCCTGGCATCGCGGCGCTaGCGCTCAGGAGCGGCTCCCGAAGCCTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: RPAVGTRLASRR*RSGAAPEASSS
Trigger: GGAAGATGAGGCTTCGGGAGCCGCTCCTGAGCGGCAGCGCCGCGATGCCAGGCGCGTCCCTACAGCGGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 72 bp GCAGGCGGGCAGCGACAGTGCGGTGGTGTGGGGCACTaGGACCGAGGTCAAGTTGCTAGCGGGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: AGGQRQCGGVGH*DRGQVASGARA
Trigger: GGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGCCCGCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CAA 72 bp CGAGCCGCCCTGCAGCGGTGTGGAGACTCCGACCAGTaGGGGCAGGCGGCTCAGGTCGCGGCCAGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: RAALQRCGDSDQ*GQAAQVAASQV
Trigger: TACCTGGCTGGCCGCGACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS GCA 72 bp GACTGCCCGATGGCGGCGGCACTGTTCGAGCCGCCCTaGAGCGGTGTGGAGACTCCGACCAGTTGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DCPMAAALFEPP*SGVETPTSWGR
Trigger: CCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCATCGGGCAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 72 bp TGGCGGCGGCACTGTTCGAGCCGCCCTGCAGCGGTGTaGAGACTCCGACCAGTTGGGGCAGGCGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: WRRHCSSRPAAV*RLRPVGAGGSG
Trigger: ACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCCGCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 72 bp CAAGTTGCTAGCGGGGCCAGGGCCAGAATCCACGACTaGGCTGGAGTCGCCACCCGGGCGCGGCTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: QVASGARARIHD*AGVATRARLGG
Trigger: TCCTCCCAGCCGCGCCCGGGTGGCGACTCCAGCCCAGTCGTGGATTCTGGCCCTGGCCCCGCTAGCAACTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 72 bp AAGCCTCATCTTCCCGCCGCCGCTTTAAGAAGGGTGTaGGCTACAGGAGGGGAGGCGACCCGCCCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: KPHLPAAALRRV*ATGGEATRPRA
Trigger: GGCCCGCGGGCGGGTCGCCTCCCCTCCTGTAGCCCACACCCTTCTTAAAGCGGCGGCGGGAAGATGAGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CCA 72 bp TCCTCAGGGCAGGCGGGCAGCGACAGTGCGGTGGTGTaGGGCACTGGGACCGAGGTCAAGTTGCTAGCGGGG +
Preference number: 6 (lower is better)
Translates to: SSGQAGSDSAVV*GTGTEVKLLAG
Trigger: CCCCGCTAGCAACTTGACCTCGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGCCCGCCTGCCCTGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CAA 90 bp GGCACTGTTCGAGCCGCCCTGCAGCGGTGTGGAGACTCCGACCAGTaGGGGCAGGCGGCTCAGGTCGCGGCCAGCCAGGTAGTAAACGAG +
Preference number: 6 (lower is better)
Translates to: GTVRAALQRCGDSDQ*GQAAQVAASQVVNE
Trigger: CTCGTTTACTACCTGGCTGGCCGCGACCTGAGCCGCCTGCCCCAACTGGTCGGAGTCTCCACACCGCTGCAGGGCGGCTCGAACAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CAA 90 bp GGCAGCGACAGTGCGGTGGTGTGGGGCACTGGGACCGAGGTCAAGTaGCTAGCGGGGCCAGGGCCAGAATCCACGACTGGGCTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: GSDSAVVWGTGTEVK*LAGPGPESTTGLES
Trigger: CGACTCCAGCCCAGTCGTGGATTCTGGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCCAGTGCCCCACACCACCGCACTGTCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS TCA 72 bp GGCTCAGGTCGCGGCCAGCCAGGTAGTAAACGAGGGTaGCGCCAAGGTGCAGAGCGCAGACGGCCACGAGCA +
Preference number: 6 (lower is better)
Translates to: GSGRGQPGSKRG*RQGAERRRPRA
Trigger: TGCTCGTGGCCGTCTGCGCTCTGCACCTTGGCGTCACCCTCGTTTACTACCTGGCTGGCCGCGACCTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CAA 72 bp AGTGCGGTGGTGTGGGGCACTGGGACCGAGGTCAAGTaGCTAGCGGGGCCAGGGCCAGAATCCACGACTGGG +
Preference number: 6 (lower is better)
Translates to: SAVVWGTGTEVK*LAGPGPESTTG
Trigger: CCCAGTCGTGGATTCTGGCCCTGGCCCCGCTAGCAACTTGACCTCGGTCCCAGTGCCCCACACCACCGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379731.5
ENST00000535206.5
CDS CAA 90 bp CAATTCGGTCAAACCTCTGAGGATTGGGTTCATTTTTCTTGTCTCTaGAGTGGCGGATCATGCGACACCTCCCGACCACAGCATTTGGGC +
Preference number: 6 (lower is better)
Translates to: QFGQTSEDWVHFSCL*SGGSCDTSRPQHLG
Trigger: GCCCAAATGCTGTGGTCGGGAGGTGTCGCATGATCCGCCACTCAAGAGACAAGAAAAATGAACCCAATCCTCAGAGGTTTGACCGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CAA 90 bp CCGTGTACCAAAACGCTAGCTCGGTGTCCCGATGTCCACTGTGATTaGGGTATACAATGGGTATCTCTGTACATCCAGCACCTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: PCTKTLARCPDVHCD*GIQWVSLYIQHLVG
Trigger: ACCTACCAGGTGCTGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACATCGGGACACCGAGCTAGCGTTTTGGTACACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS GCA 72 bp TGGGTTCATTTTTCTTGTCTCTTGAGTGGCGGATCATaGGACACCTCCCGACCACAGCATTTGGGCGAGATA +
Preference number: 6 (lower is better)
Translates to: WVHFSCLLSGGS*DTSRPQHLGEI
Trigger: TATCTCGCCCAAATGCTGTGGTCGGGAGGTGTCGCATGATCCGCCACTCAAGAGACAAGAAAAATGAACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CCA 72 bp CGGTGTCCCGATGTCCACTGTGATTTGGGTATACAATaGGTATCTCTGTACATCCAGCACCTGGTAGGTGAG +
Preference number: 6 (lower is better)
Translates to: RCPDVHCDLGIQ*VSLYIQHLVGE
Trigger: CTCACCTACCAGGTGCTGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACATCGGGACACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CAA 72 bp AAAACGCTAGCTCGGTGTCCCGATGTCCACTGTGATTaGGGTATACAATGGGTATCTCTGTACATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: KTLARCPDVHCD*GIQWVSLYIQH
Trigger: GTGCTGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACATCGGGACACCGAGCTAGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 72 bp TACCAAAACGCTAGCTCGGTGTCCCGATGTCCACTGTaGTTTGGGTATACAATGGGTATCTCTGTACATCCA +
Preference number: 6 (lower is better)
Translates to: YQNASSVSRCPL*FGYTMGISVHP
Trigger: TGGATGTACAGAGATACCCATTGTATACCCAAATCACAGTGGACATCGGGACACCGAGCTAGCGTTTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS GCA 72 bp AGGCTGAATCCAAACTTATCCATTGCAACGGAAATGTaGCGTGGCTGTGAAAAACACCTGTACGCATTATGG +
Preference number: 6 (lower is better)
Translates to: RLNPNLSIATEM*RGCEKHLYALW
Trigger: CCATAATGCGTACAGGTGTTTTTCACAGCCACGGCACATTTCCGTTGCAATGGATAAGTTTGGATTCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CCA 72 bp ATGTGCCGTGGCTGTGAAAAACACCTGTACGCATTATaGTCATTCATTGGAATGAGGTCCACGTCACTAAAC +
Preference number: 6 (lower is better)
Translates to: MCRGCEKHLYAL*SFIGMRSTSLN
Trigger: GTTTAGTGACGTGGACCTCATTCCAATGAATGACCATAATGCGTACAGGTGTTTTTCACAGCCACGGCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CAA 72 bp CACAAAGCAGGTGTAGTCATAGTCCTTCAAGGCTTCTaGAAAGCCAACATTGAGGAGCTTAGCACGATTGAA +
Preference number: 6 (lower is better)
Translates to: HKAGVVIVLQGF*KANIEELSTIE
Trigger: TTCAATCGTGCTAAGCTCCTCAATGTTGGCTTTCAAGAAGCCTTGAAGGACTATGACTACACCTGCTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS TCA 72 bp AAACTTATCCATTGCAACGGAAATGTGCCGTGGCTGTaGAAAACACCTGTACGCATTATGGTCATTCATTGG +
Preference number: 6 (lower is better)
Translates to: KLIHCNGNVPWL*KTPVRIMVIHW
Trigger: CCAATGAATGACCATAATGCGTACAGGTGTTTTTCACAGCCACGGCACATTTCCGTTGCAATGGATAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379731.5
CDS CAA 90 bp GTCACTAAACACAAAGCAGGTGTAGTCATAGTCCTTCAAGGCTTCTaGAAAGCCAACATTGAGGAGCTTAGCACGATTGAATATAGTGTC +
Preference number: 6 (lower is better)
Translates to: VTKHKAGVVIVLQGF*KANIEELSTIEYSV
Trigger: GACACTATATTCAATCGTGCTAAGCTCCTCAATGTTGGCTTTCAAGAAGCCTTGAAGGACTATGACTACACCTGCTTTGTGTTTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379731.5