RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GNT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000179913

Ensembl transcript IDs: ENST00000318683.7, ENST00000595387.1, ENST00000599265.5, ENST00000600777.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTaGGAGGAAGGTGTCGCCCCTTCCTATGGAAACAGGAGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SLALPYAQTTKVSAS*EEGVAPSYGNRSPE
Trigger: CTCTGGGCTCCTGTTTCCATAGGAAGGGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
3UTR GCA 90 bp ACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTaGAGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGC +
Preference number: 1 (lower is better)
Translates to: TSALCGHRSFWLAWN*RRSLSAIKPLQVHC
Trigger: GCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 90 bp TTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTaGAACTGCAGACGGAGCTTATCTGCCATTAAACCACTGCAGGTG +
Preference number: 1 (lower is better)
Translates to: FLTSALCGHRSFWLA*NCRRSLSAIKPLQV
Trigger: CACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR TCA 90 bp GCAATAAGGAGCTATGAAGGGTATCTGAGCAGGGGGTGGGTGGGATaGGGTCAGATCTGCCTGATAGAAATTCCTGCAGCTTTTGCCTCA +
Preference number: 1 (lower is better)
Translates to: AIRSYEGYLSRGWVG*GQICLIEIPAAFAS
Trigger: TGAGGCAAAAGCTGCAGGAATTTCTATCAGGCAGATCTGACCTCATCCCACCCACCCCCTGCTCAGATACCCTTCATAGCTCCTTATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR GCA 90 bp GAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATaGTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGC +
Preference number: 1 (lower is better)
Translates to: EYSLIKPQTFPGTPL*SDHKGLSFLGGRCR
Trigger: GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 90 bp AGATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTaGCCTGGAACTGCAGACGGAGCTTATCTGCCATTAAACCACTGC +
Preference number: 1 (lower is better)
Translates to: RYFSRQLYVDTGVSG*PGTADGAYLPLNHC
Trigger: GCAGTGGTTTAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 90 bp ACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACAAAAAGAAGATaGATATTTTCTGGAGTTCCTCCAGCCATCCAGGGAAGATGCTGG +
Preference number: 1 (lower is better)
Translates to: TLAQALLPLAATKRR*IFSGVPPAIQGRCW
Trigger: CCAGCATCTTCCCTGGATGGCTGGAGGAACTCCAGAAAATATCCATCTTCTTTTTGTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR-3UTR CCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTAAGGTCTCAGCTTCCTaGGAGGAAGGTGTCGCCCCT +
Preference number: 2 (lower is better)
Translates to: QLYVDTGVSGWPGTADGAKVSAS*EEGVAP
Trigger: AGGGGCGACACCTTCCTCCCAGGAAGCTGAGACCTT...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR-3UTR GCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTCCTGGCACTCCCTTATaGTCAGACCACAAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: QLYVDTGVSGWPGTADGAPGTPL*SDHKGL
Trigger: GAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGG...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR-3UTR TCA 90 bp AGAAACTCTGAGCTCTCACAACTTTCAAAGGACACTTGCCTCCCTCCTCTGCCCCCCTCTCTCCTGGGCTaGAAGATATTTCTCACGTCA +
Preference number: 2 (lower is better)
Translates to: RNSELSQLSKDTCLPPLPPSLLG*KIFLTS
Trigger: TGACGTGAGAAATATCTTTCAGCCCAGGAGAGAGGG...GGGCAGAGGAGGGAGGCAAGTGTCCTTTGAAAGTTGTGAGAGCTCAGAGTTTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR-3UTR CCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTATCCAGGGAAGATGCTaGAACAGTACCAGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRIQGRC*NSTRWV
Trigger: AACCCACCTGGTACTGTTCCAGCATCTTCCCTGGAT...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR-3UTR CCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTGCCACAAAAAGAAGATaGATATTTTCTGGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRATKRR*IFSGVP
Trigger: AGGAACTCCAGAAAATATCCATCTTCTTTTTGTGGC...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 72 bp TTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTaGCTGGCCTGGAACTGCAGACGGAGCTTATCTGCC +
Preference number: 3 (lower is better)
Translates to: FLTSALCGHRSF*LAWNCRRSLSA
Trigger: GGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR TCA 72 bp GCAGGTGCACTGCTTAGCATCCCGTCTGTGAGTAGGTaGGAGCAGGGAAGTAAGACTTTGACTCAAACGGGA +
Preference number: 3 (lower is better)
Translates to: AGALLSIPSVSR*EQGSKTLTQTG
Trigger: TCCCGTTTGAGTCAAAGTCTTACTTCCCTGCTCTCACCTACTCACAGACGGGATGCTAAGCAGTGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR GCA 72 bp CTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTaGAGACGGAGCTTATCTGCCATTAAACCACTGCAG +
Preference number: 3 (lower is better)
Translates to: LCGHRSFWLAWN*RRSLSAIKPLQ
Trigger: CTGCAGTGGTTTAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 72 bp TCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTaGCCTGGAACTGCAGACGGAGCTTATCTGCCATTA +
Preference number: 3 (lower is better)
Translates to: SRQLYVDTGVSG*PGTADGAYLPL
Trigger: TAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 72 bp CCTGGGCTGAAAGATATTTCTCACGTCAGCTCTATGTaGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAG +
Preference number: 3 (lower is better)
Translates to: PGLKDISHVSSM*TQEFLAGLELQ
Trigger: CTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATCTTTCAGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CCA 72 bp TCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTaGAACTGCAGACGGAGCTTATCTGCCATTAAACCA +
Preference number: 3 (lower is better)
Translates to: SALCGHRSFWLA*NCRRSLSAIKP
Trigger: TGGTTTAATGGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTGCAGGGCAGCGGCCGTaGAGCGGGACAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QLYVDTGVSGWPGTADGAAGQRP*SGTARS
Trigger: GCTTCTTGCTGTCCCGCTTCACGGCCGCTGCCCTGC...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAACCCGCACGCCAGACGTaGGGATGCCGCTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEPARQT*GCRCGR
Trigger: CCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGG...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCCCGCACGCCAGACGTaGGGATGCCGCTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCPARQT*GCRCGR
Trigger: CCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGG...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVAWPARV*GRPEEP
Trigger: AGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCA...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGCCGATGGCCAGAATaGGGGTGGCATTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSRRWPE*GWHWAA
Trigger: GGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCG...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGCAGGGCAGCGGCCGTaGAGCGGGACAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEAGQRP*SGTARS
Trigger: GCTTCTTGCTGTCCCGCTTCACGGCCGCTGCCCTGC...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGCAAACCCCGTACCTTaGGCTCGCGGCCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCANPVP*ARGPTC
Trigger: GCACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAACCTTGCGGGCCTCGTaGGGGTTGGAGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEETLRAS*GLEAVP
Trigger: GGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGT...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVWPARV*GRPEEP
Trigger: AGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCA...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGGGCCTCGTGCGGGTTaGAGGCTGTGCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRGPRAG*RLCPPG
Trigger: TCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTGGACAGGCGTTGCGATaGAGCCCGCACGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: QLYVDTGVSGWPGTADGAGQALR*SPHARR
Trigger: ACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCC...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACCGCCGATGGCCAGAATaGGGGTGGCATTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHRRWPE*GWHWAA
Trigger: GGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCG...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTGCTCCAGCAGCCGGTTaGCCTTGCGGGCCTCGTGCG +
Preference number: 4 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRAPAAG*PCGPRA
Trigger: CGCACGAGGCCCGCAAGGTCAACCGGCTGCTGGAGC...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCGACAGTCCCGCCTCTaGCCCTCTACCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVARQSRL*PSTCSS
Trigger: AGAGGAGCAGGTAGAGGGGCAGAGGCGGGACTGTCG...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGGGATCGCCGGTGGCTaGTCCTGGACCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRGIAGG*SWTLQV
Trigger: CACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACGCAAACCCCGTACCTTaGGCTCGCGGCCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHANPVP*ARGPTC
Trigger: GCACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGC...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGCGGGTTGGAGGCTGTaGCCACCAGGAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRAGWRL*PPGRGG
Trigger: GCCTCCTCTTCCTGGTGGGCACAGCCTCCAACCCGC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGCGGGTTGGAGGCTGTaGCCACCAGGAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEAGWRL*PPGRGG
Trigger: GCCTCCTCTTCCTGGTGGGCACAGCCTCCAACCCGC...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCGTCTCCGTGAGTCTGTaGCTCCAGCTCCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPVSVSL*LQLQQP
Trigger: CGGCTGCTGGAGCTGGAGGCACAGACTCACGGAGAC...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCAAGGAGGACAGGCGTTaGGATGGAGCCCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPKEDRR*DGARTP
Trigger: TGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTT...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGCCGGTGGCTGCTCCTaGACCTTGCAGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVAGGCS*TLQVGG
Trigger: ACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGC...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACGGGCCTCGTGCGGGTTaGAGGCTGTGCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHGPRAG*RLCPPG
Trigger: TCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCC...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTTGCCCCACGAAGAGGTaGCGGCCAGGGTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGCPTKR*RPGSWS
Trigger: GGACCATGACCCTGGCCGCCACCTCTTCGTGGGGCA...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGCCCCACGAAGAGGTaGCGGCCAGGGTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVCPTKR*RPGSWS
Trigger: GGACCATGACCCTGGCCGCCACCTCTTCGTGGGGCA...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGGACAGGCGTTGCGATaGAGCCCGCACGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVGQALR*SPHARR
Trigger: ACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCC...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCGTCATCATCCCCGTTaGGCACGAAGCTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVARHHPR*ARSWRW
Trigger: CCAACGCCAGCTTCGTGCTCAACGGGGATGATGACG...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCTCTGATTGCCGCAGGTaGGGTTGGGCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPSDCRR*GWAGSA
Trigger: CGCTGAACCAGCCCAACCTCACCTGCGGCAATCAGA...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCTTGACTGGCAGACACTaGGGCCTGAAGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVALTGRH*GLKLGA
Trigger: AGCCCCCAGCTTCAGGCCTCAGTGTCTGCCAGTCAA...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAACTCTGCCCCTCTACCTaGTCCTCTCAGCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEELCPST*SSQLAS
Trigger: GCTCGCGAGCTGAGAGGAGCAGGTAGAGGGGCAGAG...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCAAGAGGAGGCGCAGCTaGAAACCCCGTACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPKRRRS*KPRTLR
Trigger: GCGCAAGGTACGGGGTTTGCAGCTGCGCCTCCTCTT...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCAAGAGGAGGCGCAGCTaGAAACCCCGTACCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVAKRRRS*KPRTLR
Trigger: GCGCAAGGTACGGGGTTTGCAGCTGCGCCTCCTCTT...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGTCTCCGTGAGTCTGTaGCTCCAGCTCCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEVSVSL*LQLQQP
Trigger: CGGCTGCTGGAGCTGGAGGCACAGACTCACGGAGAC...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCAAGGAGGACAGGCGTTaGGATGGAGCCCGCACGCCA +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRKEDRR*DGARTP
Trigger: TGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTT...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TCAAACGGGACGGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCAGCCGGTGGCTGCTCCTaGACCTTGCAGGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SNGTDASTVGTLAQALLPAGGCS*TLQVGG
Trigger: ACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGC...TGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCCGTCCCGTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGCACGAAGCTGGCGTTaGCGCACCTTGTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVARSWR*RTLSPA
Trigger: GGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGC...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCGTCATCATCCCCGTTaGGCACGAAGCTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRRHHPR*ARSWRW
Trigger: CCAACGCCAGCTTCGTGCTCAACGGGGATGATGACG...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGCTGCTGGAGGACCTaGATCTCTCCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGGCWRT*ISPFSR
Trigger: CCTGGAGAAGGGAGAGATTCAGGTCCTCCAGCAGCC...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGCATTGGGCCGCCGGTaGCGGAGATACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCALGRR*RRYFIL
Trigger: CAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTTATCTGCCCCTGGACCTTGCAGGTaGGTGGTGACACTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: CGHRSFWLAWNCRRSLSAPGPCR*VVTLAD
Trigger: GTCTGCTAGTGTCACCACCCACCTGCAAGGTCCAGG...GGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCAAGATGTCCAAGACATaGGCAGCACGGCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPKMSKT*AARRRA
Trigger: TGCCCTGCGCCGTGCTGCCCATGTCTTGGACATCTT...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTTACAGGAGGAAGTTCTaGACGTGCTGCGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCYRRKF*TCCGCV
Trigger: CACGCAGCCGCAGCACGTTCAGAACTTCCTCCTGTA...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGGTACCGCTCATTCTaGGTCACCACCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGGYRSF*VTTSGT
Trigger: TGTGCCAGAGGTGGTGACTCAGAATGAGCGGTACCC...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGGGTACCGCTCATTCTaGGTCACCACCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRGYRSF*VTTSGT
Trigger: TGTGCCAGAGGTGGTGACTCAGAATGAGCGGTACCC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR TCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCACTCCTGGGCTCAAGTaGTCCTCCCACTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVATPGLK*SSHFGL
Trigger: GAGACCAAAGTGGGAGGATCACTTGAGCCCAGGAGT...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGCTGCTCCTGGACCTTaGAGGTGGGTGGTGACACTA +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCAAPGP*RWVVTL
Trigger: TAGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCGCGCACCTTGTCTCCTaGCACTGTAAGAACAGGACC +
Preference number: 4 (lower is better)
Translates to: LPYAQTTKVSASWEEGVAAHLVS*HCKNRT
Trigger: GGTCCTGTTCTTACAGTGGCAGGAGACAAGGTGCGC...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCGCCATCCAGGGAAGATaGTGGAACAGTACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPAIQGR*WNSTRW
Trigger: CCACCTGGTACTGTTCCAGCATCTTCCCTGGATGGC...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTCTTGCCTCCCTCCTCTaGCCACACCTCCACCATTAC +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGLASLL*PHLHHY
Trigger: GTAATGGTGGAGGTGTGGGCAGAGGAGGGAGGCAAG...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGGAGATACTTCATCCTaGCCAGCCAGGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRGDTSS*PARVWG
Trigger: ACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGTGGCGAAGTCCGGGTaGGTGACCATAGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVVAKSG*VTIEVL
Trigger: CAACACCTCTATGGTCACCCACCCGGACTTCGCCAC...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGGTGGCGAAGTCCGGGTaGGTGACCATAGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSVAKSG*VTIEVL
Trigger: CAACACCTCTATGGTCACCCACCCGGACTTCGCCAC...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp ATCTGTAAAACATACTGGGTGAGGGAGGCTGCTGGAGGACCTGAATCTCTCCCTGCACGAAGCTGGCGTTaGCGCACCTTGTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ICKTYWVREAAGGPESLPARSWR*RTLSPA
Trigger: GGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGC...AGGGAGAGATTCAGGTCCTCCAGCAGCCTCCCTCACCCAGTATGTTTTACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTAAGATGTCCAAGACATaGGCAGCACGGCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGKMSKT*AARRRA
Trigger: TGCCCTGCGCCGTGCTGCCCATGTCTTGGACATCTT...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCAGGTGAGGTTGGGCTaGTTCAGCGCATCCCACATG +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCQVRLG*FSASHM
Trigger: CATGTGGGATGCGCTGAACCAGCCCAACCTCACCTG...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGTGTCGCCCCTTCCTATaGAAACAGGAGCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSCRPFL*KQEPRG
Trigger: GCCTCTGGGCTCCTGTTTCCATAGGAAGGGGCGACA...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGAAGGTCTCAGCTTCCTaGGAGGAAGGTGTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVKVSAS*EEGVAP
Trigger: AGGGGCGACACCTTCCTCCCAGGAAGCTGAGACCTT...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTTGGGGAACACAGGGATaGGGGCTCCTAATGAGGACC +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCWGTQG*GLLMRT
Trigger: GGTCCTCATTAGGAGCCCCCATCCCTGTGTTCCCCA...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
3UTR CAA 72 bp CTCCCTCCTCTGCCCACACCTCCACCATTACAGCATTaGATCCCACAAGTAAGGAGGGGGCGGTCCTATTCC +
Preference number: 4 (lower is better)
Translates to: LPPLPTPPPLQH*IPQVRRGRSYS
Trigger: GGAATAGGACCGCCCCCTCCTTACTTGTGGGATCAAATGCTGTAATGGTGGAGGTGTGGGCAGAGGAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTGCATTGGGCCGCCGGTaGCGGAGATACTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRALGRR*RRYFIL
Trigger: CAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGC...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp CAGAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATGCTCAGACCTTGCGGGCCTCGTaGGGGTTGGAGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QNIHSSNLKPSLALPYAQTLRAS*GLEAVP
Trigger: GGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGT...CTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGCGCACCTTGTCTCCTaGCACTGTAAGAACAGGACC +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCAHLVS*HCKNRT
Trigger: GGTCCTGTTCTTACAGTGGCAGGAGACAAGGTGCGC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGACGTTTTGGATCAGTTaGCCCACGAAGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSTFWIS*PTKRWR
Trigger: CCGCCACCTCTTCGTGGGGCAACTGATCCAAAACGT...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCCCTGGCACTCCCTTATaGTCAGACCACAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPPGTPL*SDHKGL
Trigger: GAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGG...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCGCAATCATGGTTCACTaGAGCCTCCAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRAIMVH*SLQLLG
Trigger: GCCCAGGAGTTGGAGGCTGCAGTGAACCATGATTGC...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTTATCTGCCACCCCCACAATAGGGTaGGTACCGCTCATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CGHRSFWLAWNCRRSLSATPTIG*VPLILS
Trigger: ACTCAGAATGAGCGGTACCCACCCTATTGTGGGGGT...GGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTCCCTCTCTCCTGGGCTaGAAGATATTTCTCACGTCA +
Preference number: 4 (lower is better)
Translates to: QLYVDTGVSGWPGTADGAPSLLG*KIFLTS
Trigger: TGACGTGAGAAATATCTTTCAGCCCAGGAGAGAGGG...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp TATGTTTTTGTCTTCTTATTGCCGCCCAGTGGAGTACAGTGGCGCAATCATGGTGGGATCGCCGGTGGCTaGTCCTGGACCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: YVFVFLLPPSGVQWRNHGGIAGG*SWTLQV
Trigger: CACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCC...ACCATGATTGCGCCACTGTACTCCACTGGGCGGCAATAAGAAGACAAAAACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCTGGCACTCCCTTATaGTCAGACCACAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRPGTPL*SDHKGL
Trigger: GAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGG...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCTTTCAAAGGACACTTaGCTCCCTCCTCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRLSKDT*LPPLPT
Trigger: TGTGGGCAGAGGAGGGAGGCAAGTGTCCTTTGAAAG...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTGGAGATACTTCATCCTaGCCAGCCAGGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRGDTSS*PARVWG
Trigger: ACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCC...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTTCCAAAAAGCCCGGATaGGGCCCACGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCSKKPG*GPRFGS
Trigger: TGATCCAAAACGTGGGCCCCATCCGGGCTTTTTGGA...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTCTGAGTCACCACCTCTaGCACATAGTACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QLYVDTGVSGWPGTADGALSHHL*HIVLAP
Trigger: TGGAGCAAGTACTATGTGCCAGAGGTGGTGACTCAG...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTACCCCCACAATAGGGTaGGTACCGCTCATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGTPTIG*VPLILS
Trigger: ACTCAGAATGAGCGGTACCCACCCTATTGTGGGGGT...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp AGAAACTCTGAGCTCTCACAACTTTCAAAGGACACTTGCCTCCCTCCTCTGCCCCAGGTGAGGTTGGGCTaGTTCAGCGCATCCCACATG +
Preference number: 4 (lower is better)
Translates to: RNSELSQLSKDTCLPPLPQVRLG*FSASHM
Trigger: CATGTGGGATGCGCTGAACCAGCCCAACCTCACCTG...GGGCAGAGGAGGGAGGCAAGTGTCCTTTGAAAGTTGTGAGAGCTCAGAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCAGTTTCTGGCTGGCCTaGAACTGCAGACGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRSFWLA*NCRRSL
Trigger: TAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACT...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TGGAGTTCCTCCAGCCATCCAGGGAAGATGCTGGAACAGTACCAGGTGGGTTTTGGACACAGGAGTTTCTaGCTGGCCTGGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: WSSSSHPGKMLEQYQVGFGHRSF*LAWNCR
Trigger: TCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCC...AAAACCCACCTGGTACTGTTCCAGCATCTTCCCTGGATGGCTGGAGGAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAACCCAGTGGAGTACAGTaGCGCAATCATGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEPSGVQ*RNHGSL
Trigger: CAGTGAACCATGATTGCGCCACTGTACTCCACTGGG...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACCCCAGTGCTGTTCTCTaGATTCTTGGGGAACACAGG +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHPSAVL*ILGEHR
Trigger: CCTGTGTTCCCCAAGAATTCAGAGAACAGCACTGGG...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCCATGTTGTCTGTGTGTaGAAAGACGTCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPHVVCV*KDVIIP
Trigger: GGGGATGATGACGTCTTTGCACACACAGACAACATG...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCTGGCACATAGTACTTaGTCCAAAAAGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSLAHST*SKKPGW
Trigger: CCATCCGGGCTTTTTGGAGCAAGTACTATGTGCCAG...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAATGGCTGGCCTGGAACTaGAGACGGAGCTTATCTGCC +
Preference number: 4 (lower is better)
Translates to: DISHVSSMWTQEFLAGLEWLAWN*RRSLSA
Trigger: GGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCA...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCCTGAGTCACCACCTCTaGCACATAGTACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVLSHHL*HIVLAP
Trigger: TGGAGCAAGTACTATGTGCCAGAGGTGGTGACTCAG...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAATGTCGCCCCTTCCTATaGAAACAGGAGCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DISHVSSMWTQEFLAGLECRPFL*KQEPRG
Trigger: GCCTCTGGGCTCCTGTTTCCATAGGAAGGGGCGACA...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TGGAGTTCCTCCAGCCATCCAGGGAAGATGCTGGAACAGTACCAGGTGGGTTTTCCTCCCAAGTATAGCTaGGACTACAGGCATGTGAGC +
Preference number: 4 (lower is better)
Translates to: WSSSSHPGKMLEQYQVGFPPKYS*DYRHVS
Trigger: GCTCACATGCCTGTAGTCCCAGCTATACTTGGGAGG...AAAACCCACCTGGTACTGTTCCAGCATCTTCCCTGGATGGCTGGAGGAACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGGACCCCAGAAACTCTaGGCTCTCACAACTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LALPYAQTTKVSASWEEGGPQKL*ALTTFK
Trigger: TTTGAAAGTTGTGAGAGCTCAGAGTTTCTGGGGTCC...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTCCATCACAATGCCTGTaGAGCTTGACTGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRPSQCL*SLTGRH
Trigger: GTGTCTGCCAGTCAAGCTTCACAGGCATTGTGATGG...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGTGTAAGAACAGGACCTaGTTGAGCGTGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSCKNRT*LSVRLK
Trigger: CTTCAACCTCACGCTCAAGCAGGTCCTGTTCTTACA...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCATGTTGTCTGTGTGTaGAAAGACGTCATCATCCCC +
Preference number: 4 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRHVVCV*KDVIIP
Trigger: GGGGATGATGACGTCTTTGCACACACAGACAACATG...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR GCA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAAACGTTTTGGATCAGTTaGCCCACGAAGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: DISHVSSMWTQEFLAGLETFWIS*PTKRWR
Trigger: CCGCCACCTCTTCGTGGGGCAACTGATCCAAAACGT...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACATCCAGGGAAGATGCTaGAACAGTACCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHIQGRC*NSTRWV
Trigger: AACCCACCTGGTACTGTTCCAGCATCTTCCCTGGAT...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACCACGTCAGCTCTATGTaGACACAGGAGTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHHVSSM*TQEFLA
Trigger: AGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTG...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCAGGACCCCTCTCTCCTaGGCTGAAAGATATTTCTCA +
Preference number: 4 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVRTPLS*AERYFS
Trigger: TGAGAAATATCTTTCAGCCCAGGAGAGAGGGGTCCT...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp GCACAGGCACTTCTGCCATTAGCAGCCACAAAAAGAAGATGGATATTTTCTGGATCTGATTGCCGCAGGTaGGGTTGGGCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: AQALLPLAATKRRWIFSGSDCRR*GWAGSA
Trigger: CGCTGAACCAGCCCAACCTCACCTGCGGCAATCAGA...TCCAGAAAATATCCATCTTCTTTTTGTGGCTGCTAATGGCAGAAGTGCCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTAGGGAAGTAAGACTTTaGCTCAAACGGGACGGATGC +
Preference number: 4 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRREVRL*LKRDGC
Trigger: GCATCCGTCCCGTTTGAGTCAAAGTCTTACTTCCCT...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAATTAGCATCCCGTCTGTaGGTAGGTGAGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: DISHVSSMWTQEFLAGLELASRL*VGESRE
Trigger: TTCCCTGCTCTCACCTACTCACAGACGGGATGCTAA...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp TATGTTTTTGTCTTCTTATTGCCGCCCAGTGGAGTACAGTGGCGCAATCATGGTGCTATGAAGGGTATCTaGGCAGGGGGTGGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: YVFVFLLPPSGVQWRNHGAMKGI*AGGGWD
Trigger: ATCCCACCCACCCCCTGCTCAGATACCCTTCATAGC...ACCATGATTGCGCCACTGTACTCCACTGGGCGGCAATAAGAAGACAAAAACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp ATCTGTAAAACATACTGGGTGAGGGAGGCTGCTGGAGGACCTGAATCTCTCCCTCTCAAACGGGACGGATaGATCCACAGTTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: ICKTYWVREAAGGPESLPLKRDG*IHSWNS
Trigger: AGAGTTCCAACTGTGGATGCATCCGTCCCGTTTGAG...AGGGAGAGATTCAGGTCCTCCAGCAGCCTCCCTCACCCAGTATGTTTTACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TATGTTTTTGTCTTCTTATTGCCGCCCAGTGGAGTACAGTGGCGCAATCATGGTAAGGTCTCAGCTTCCTaGGAGGAAGGTGTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: YVFVFLLPPSGVQWRNHGKVSAS*EEGVAP
Trigger: AGGGGCGACACCTTCCTCCCAGGAAGCTGAGACCTT...ACCATGATTGCGCCACTGTACTCCACTGGGCGGCAATAAGAAGACAAAAACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp ATCTGTAAAACATACTGGGTGAGGGAGGCTGCTGGAGGACCTGAATCTCTCCCTGGATGCATCCACAGTTaGAACTCTAGCACAGGCACT +
Preference number: 4 (lower is better)
Translates to: ICKTYWVREAAGGPESLPGCIHS*NSSTGT
Trigger: AGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC...AGGGAGAGATTCAGGTCCTCCAGCAGCCTCCCTCACCCAGTATGTTTTACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACGTGATCCTCCCACTTTaGTCTCCCAATGTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHVILPL*SPNVLE
Trigger: TTCTAGCACATTGGGAGACCAAAGTGGGAGGATCAC...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR TCA 90 bp GCACAGGCACTTCTGCCATTAGCAGCCACAAAAAGAAGATGGATATTTTCTGGATACAGGAGGAAGTTCTaGACGTGCTGCGGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AQALLPLAATKRRWIFSGYRRKF*TCCGCV
Trigger: CACGCAGCCGCAGCACGTTCAGAACTTCCTCCTGTA...TCCAGAAAATATCCATCTTCTTTTTGTGGCTGCTAATGGCAGAAGTGCCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp AGAAACTCTGAGCTCTCACAACTTTCAAAGGACACTTGCCTCCCTCCTCTGCCCTGTAAGAACAGGACCTaGTTGAGCGTGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RNSELSQLSKDTCLPPLPCKNRT*LSVRLK
Trigger: CTTCAACCTCACGCTCAAGCAGGTCCTGTTCTTACA...GGGCAGAGGAGGGAGGCAAGTGTCCTTTGAAAGTTGTGAGAGCTCAGAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGGCACATAGTACTTaGTCCAAAAAGCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: DISHVSSMWTQEFLAGLELAHST*SKKPGW
Trigger: CCATCCGGGCTTTTTGGAGCAAGTACTATGTGCCAG...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR GCA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCCCTGATAGAAATTCCTaGAGCTTTTGCCTCACACAT +
Preference number: 4 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVPDRNS*SFCLTH
Trigger: ATGTGTGAGGCAAAAGCTGCAGGAATTTCTATCAGG...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGGAAGACATCATCAATaGGGAAGATGTCCAAGACAT +
Preference number: 4 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCGRHHQ*GRCPRH
Trigger: ATGTCTTGGACATCTTCCCCATTGATGATGTCTTCC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGAAGACATCATCAATaGGGAAGATGTCCAAGACAT +
Preference number: 4 (lower is better)
Translates to: SLALPYAQTTKVSASWEEGRHHQ*GRCPRH
Trigger: ATGTCTTGGACATCTTCCCCATTGATGATGTCTTCC...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CCA 90 bp TATGTTTTTGTCTTCTTATTGCCGCCCAGTGGAGTACAGTGGCGCAATCATGGTACAGGAGTTTCTGGCTaGCCTGGAACTGCAGACGGA +
Preference number: 4 (lower is better)
Translates to: YVFVFLLPPSGVQWRNHGTGVSG*PGTADG
Trigger: TCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGT...ACCATGATTGCGCCACTGTACTCCACTGGGCGGCAATAAGAAGACAAAAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp CAGAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATGCTCAGTCCAAAAAGCCCGGATaGGGCCCACGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: QNIHSSNLKPSLALPYAQSKKPG*GPRFGS
Trigger: TGATCCAAAACGTGGGCCCCATCCGGGCTTTTTGGA...CTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp CAGAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATGCTCAGACCTCAAACCTTCCCTaGCACTCCCTTATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QNIHSSNLKPSLALPYAQTSNLP*HSLMLR
Trigger: TCTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGT...CTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCACAAAAAGAAGATaGATATTTTCTGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVATKRR*IFSGVP
Trigger: AGGAACTCCAGAAAATATCCATCTTCTTTTTGTGGC...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CCA 90 bp TATGTTTTTGTCTTCTTATTGCCGCCCAGTGGAGTACAGTGGCGCAATCATGGTTGTTCTCTGAATTCTTaGGGAACACAGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: YVFVFLLPPSGVQWRNHGCSLNS*GTQGWG
Trigger: CCCCCATCCCTGTGTTCCCCAAGAATTCAGAGAACA...ACCATGATTGCGCCACTGTACTCCACTGGGCGGCAATAAGAAGACAAAAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS CCA 90 bp TGGGCCGCCGGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCTCCTGGGCGGCTCCTTGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: WAAGAGDTSSWPARV*GRPEEPPGRLLGSG
Trigger: GCCAGACCCAAGGAGCCGCCCAGGAGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599265.5
CDS CCA 90 bp TGGGCCGCCGGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCTCCTGGGCGGCTCCTGCTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: WAAGAGDTSSWPARV*GRPEEPPGRLLLLS
Trigger: TGAGAGGAGCAGGAGCCGCCCAGGAGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600777.1
CDS CCA 90 bp GGAGTGGGCCAGGCCAGGGCCTCGGGGATCGCCGGTGGCTGCTCCTaGACCTTGCAGGTGGGTGGTGACACTAGCAGACTGAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GVGQARASGIAGGCS*TLQVGGDTSRLKRR
Trigger: CCTCCTCTTCAGTCTGCTAGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCCCGAGGCCCTGGCCTGGCCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS TCA 90 bp GCAGGATGTCTCCGTGAGTCTGTGCCTCCAGCTCCAGCAGCCGGTTaGCCTTGCGGGCCTCGTGCGGGTTGGAGGCTGTGCCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: AGCLRESVPPAPAAG*PCGPRAGWRLCPPG
Trigger: TCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCTGGAGCTGGAGGCACAGACTCACGGAGACATCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS GCA 90 bp GTGAAAGCGCCGATGGCCAGAATGAGGGTGGCATTGGGCCGCCGGTaGCGGAGATACTTCATCCTGGCCAGCCAGGGTCTGGGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: VKAPMARMRVALGRR*RRYFILASQGLGSA
Trigger: GGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCGCTTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 90 bp CAGGTCTCGGTAGAAGCAGGGGTCAAAGGAGGACAGGCGTTGCGATaGAGCCCGCACGCCAGACGTGCGGATGCCGCTGTGGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QVSVEAGVKGGQALR*SPHARRADAAVGGR
Trigger: CCTGCCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTTGACCCCTGCTTCTACCGAGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 90 bp AGGAGGACAGGCGTTGCGATGGAGCCCGCACGCCAGACGTGCGGATaGCGCTGTGGGAGGCAGGCTTCAGTCCCTCAAGCTCCAGACACA +
Preference number: 5 (lower is better)
Translates to: RRTGVAMEPARQTCG*RCGRQASVPQAPDT
Trigger: TGTGTCTGGAGCTTGAGGGACTGAAGCCTGCCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS CCA 90 bp AGGCGTTGCGATGGAGCCCGCACGCCAGACGTGCGGATGCCGCTGTaGGAGGCAGGCTTCAGTCCCTCAAGCTCCAGACACATACCCAGG +
Preference number: 5 (lower is better)
Translates to: RRCDGARTPDVRMPL*EAGFSPSSSRHIPR
Trigger: CCTGGGTATGTGTCTGGAGCTTGAGGGACTGAAGCCTGCCTCCCACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS TCA 90 bp GGAAGATGTCCAAGACATGGGCAGCACGGCGCAGGGCAGCGGCCGTaGAGCGGGACAGCAAGAAGCCACCACCCCCACAATAGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: GRCPRHGQHGAGQRP*SGTARSHHPHNRVG
Trigger: ACCCACCCTATTGTGGGGGTGGTGGCTTCTTGCTGTCCCGCTTCACGGCCGCTGCCCTGCGCCGTGCTGCCCATGTCTTGGACATCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCCGGGCCTCGTGCGGGTaGGAGGCTGTGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: ALPYAQTTKVSASWEEGVRASCG*EAVPTR
Trigger: CCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCG...GACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTTATCTGCCTGCAAACCCCGTACCTaGCGCTCGCGGCCCCACGTG +
Preference number: 5 (lower is better)
Translates to: CGHRSFWLAWNCRRSLSACKPRT*RSRPHV
Trigger: CACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGCA...GGCAGATAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCTGCAAACCCCGTACCTaGCGCTCGCGGCCCCACGTG +
Preference number: 5 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPCKPRT*RSRPHV
Trigger: CACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGCA...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGAGCAGCCGGTTGACCTaGCGGGCCTCGTGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSSSRLT*RASCGL
Trigger: CAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCT...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCAAAGGAGGACAGGCGTaGCGATGGAGCCCGCACGCC +
Preference number: 5 (lower is better)
Translates to: LPYAQTTKVSASWEEGVAKGGQA*RWSPHA
Trigger: GGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTT...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTAGAATGAGGGTGGCATaGGGCCGCCGGTGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCRMRVA*GRRCRR
Trigger: TCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCT...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TCAAACGGGACGGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCAAGAATGAGGGTGGCATaGGGCCGCCGGTGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: SNGTDASTVGTLAQALLPRMRVA*GRRCRR
Trigger: TCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCT...TGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCCGTCCCGTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGCTGCTCCTGGACCTaGCAGGTGGGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: SLALPYAQTTKVSASWEEGCSWT*QVGGDT
Trigger: AGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCC...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GGATGCATCCACAGTTGGAACTCTAGCACAGGCACTTCTGCCATTAGCAGCCACGTGACCATAGAGGTGTaGGCATGGCACGGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: GCIHSWNSSTGTSAISSHVTIEV*AWHGAG
Trigger: CCCGGCCCCGTGCCATGCCAACACCTCTATGGTCAC...GTGGCTGCTAATGGCAGAAGTGCCTGTGCTAGAGTTCCAACTGTGGATGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGAGCACGAAGCTGGCGTaGGCGCACCTTGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVSTKLA*AHLVSC
Trigger: GCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCT...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp ACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCTTGCCGCAGGTGAGGTaGGGCTGGTTCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: TPLCSDHKGLSFLGGRCRLPQVR*GWFSAS
Trigger: GGATGCGCTGAACCAGCCCAACCTCACCTGCGGCAA...GCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS CCA 90 bp GGCCGTGAAGCGGGACAGCAAGAAGCCACCACCCCCACAATAGGGTaGGTACCGCTCATTCTGAGTCACCACCTCTGGCACATAGTACTT +
Preference number: 5 (lower is better)
Translates to: GREAGQQEATTPTIG*VPLILSHHLWHIVL
Trigger: AAGTACTATGTGCCAGAGGTGGTGACTCAGAATGAGCGGTACCCACCCTATTGTGGGGGTGGTGGCTTCTTGCTGTCCCGCTTCACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TGGAGTTCCTCCAGCCATCCAGGGAAGATGCTGGAACAGTACCAGGTGGGTTTTAGCACGAAGCTGGCGTaGGCGCACCTTGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WSSSSHPGKMLEQYQVGFSTKLA*AHLVSC
Trigger: GCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCT...AAAACCCACCTGGTACTGTTCCAGCATCTTCCCTGGATGGCTGGAGGAACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp CTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCACGTCATCATCCCCGTaGAGCACGAAGCTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LPYAQTTKVSASWEEGVATSSSP*STKLAL
Trigger: CAACGCCAGCTTCGTGCTCAACGGGGATGATGACGT...GGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 90 bp GCCAGGGTCATGGTCCTGCAGGTAGAAGACCATGTTGTCTGTGTGTaGAAAGACGTCATCATCCCCGTTGAGCACGAAGCTGGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: ARVMVLQVEDHVVCV*KDVIIPVEHEAGVG
Trigger: GCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACACAGACAACATGGTCTTCTACCTGCAGGACCATGACCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS-3UTR CAA 90 bp CAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTTTGCTAGGGGAGGACTaGATCACCAGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QLYVDTGVSGWPGTADGALLGED*ITSSRK
Trigger: CTTCCTGCTGCTGGTGATCAAGTCCTCCCCTAGCAA...AGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp GCACAGGCACTTCTGCCATTAGCAGCCACAAAAAGAAGATGGATATTTTCTGGACGGGCCTCGTGCGGGTaGGAGGCTGTGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: AQALLPLAATKRRWIFSGRASCG*EAVPTR
Trigger: CCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCG...TCCAGAAAATATCCATCTTCTTTTTGTGGCTGCTAATGGCAGAAGTGCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTTGGCGTTGGCGCACCTaGTCTCCTGCCACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCWRWRT*SPATVR
Trigger: TCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCA...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGGCGTTGGCGCACCTaGTCTCCTGCCACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVWRWRT*SPATVR
Trigger: TCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCA...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TCCCTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAACGTCATCATCCCCGTaGAGCACGAAGCTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SLALPYAQTTKVSASWEETSSSP*STKLAL
Trigger: CAACGCCAGCTTCGTGCTCAACGGGGATGATGACGT...TTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCACGTTTTGGATCAGTaGCCCCACGAAGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCHVLDQ*PHEEVA
Trigger: CGCCACCTCTTCGTGGGGCAACTGATCCAAAACGTG...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTGATGGGGCCCACGTTTaGGATCAGTTGCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: GTPLCSDHKGLSFLGGRCDGAHV*DQLPHE
Trigger: TTCGTGGGGCAACTGATCCAAAACGTGGGCCCCATC...ACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGGATGGGGCCCACGTTTaGGATCAGTTGCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSDGAHV*DQLPHE
Trigger: TTCGTGGGGCAACTGATCCAAAACGTGGGCCCCATC...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTTTGCCGCAGGTGAGGTaGGGCTGGTTCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRLPQVR*GWFSAS
Trigger: GGATGCGCTGAACCAGCCCAACCTCACCTGCGGCAA...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTTGCTAGGGGAGGACTaGATCACCAGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVLLGED*ITSSRK
Trigger: CTTCCTGCTGCTGGTGATCAAGTCCTCCCCTAGCAA...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp CAGAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATGCTCAGAGCAGCCGGTTGACCTaGCGGGCCTCGTGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: QNIHSSNLKPSLALPYAQSSRLT*RASCGL
Trigger: CAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCT...CTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCTGCTTGAGCGTGAGGTaGAAGAAGGAGTCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPCLSVR*KKESWK
Trigger: CTTCCACGACTCCTTCTTCAACCTCACGCTCAAGCA...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGACTTTCAAAGGACACTaGCCTCCCTCCTCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVTFKGH*PPSSAH
Trigger: GTGGGCAGAGGAGGGAGGCAAGTGTCCTTTGAAAGT...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCCCCTGTTCTCTGAATTCTaGGGGAACACAGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SLMLRPQRSQLPGRKVSPLFSEF*GNTGMG
Trigger: CCCCATCCCTGTGTTCCCCAAGAATTCAGAGAACAG...GGGCGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS TCA 90 bp AGAAGACCATGTTGTCTGTGTGTGCAAAGACGTCATCATCCCCGTTaGGCACGAAGCTGGCGTTGGCGCACCTTGTCTCCTGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: RRPCCLCVQRRHHPR*ARSWRWRTLSPATV
Trigger: TACAGTGGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACACAGACAACATGGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS-3UTR CAA 90 bp CTGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTTGCTTGAGCGTGAGGTaGAAGAAGGAGTCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LALPYAQTTKVSASWEEGCLSVR*KKESWK
Trigger: CTTCCACGACTCCTTCTTCAACCTCACGCTCAAGCA...ACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp CAGAATATTCACTCATCAAACCTCAAACCTTCCCTGGCACTCCCTTATGCTCAGGGCTGCTCCTGGACCTaGCAGGTGGGTGGTGACACT +
Preference number: 5 (lower is better)
Translates to: QNIHSSNLKPSLALPYAQGCSWT*QVGGDT
Trigger: AGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCC...CTGAGCATAAGGGAGTGCCAGGGAAGGTTTGAGGTTTGATGAGTGAATATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp GCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACTGCAGACGGAGCTTAAAGAACAGGACCTGCTaGAGCGTGAGGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ALCGHRSFWLAWNCRRSLKNRTC*SVRLKK
Trigger: CTTCTTCAACCTCACGCTCAAGCAGGTCCTGTTCTT...TAAGCTCCGTCTGCAGTTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TGGCACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGAAGAACAGGACCTGCTaGAGCGTGAGGTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: WHSLMLRPQRSQLPGRKVKNRTC*SVRLKK
Trigger: CTTCTTCAACCTCACGCTCAAGCAGGTCCTGTTCTT...CACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS-3UTR CAA 90 bp GATATTTCTCACGTCAGCTCTATGTGGACACAGGAGTTTCTGGCTGGCCTGGAACACGTTTTGGATCAGTaGCCCCACGAAGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: DISHVSSMWTQEFLAGLEHVLDQ*PHEEVA
Trigger: CGCCACCTCTTCGTGGGGCAACTGATCCAAAACGTG...TTCCAGGCCAGCCAGAAACTCCTGTGTCCACATAGAGCTGACGTGAGAAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp GCACAGGCACTTCTGCCATTAGCAGCCACAAAAAGAAGATGGATATTTTCTGGAAAAGGAGGACAGGCGTaGCGATGGAGCCCGCACGCC +
Preference number: 5 (lower is better)
Translates to: AQALLPLAATKRRWIFSGKGGQA*RWSPHA
Trigger: GGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTT...TCCAGAAAATATCCATCTTCTTTTTGTGGCTGCTAATGGCAGAAGTGCCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGCAGGGAAGTAAGACTTaGACTCAAACGGGACGGATG +
Preference number: 5 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSQGSKT*TQTGRM
Trigger: CATCCGTCCCGTTTGAGTCAAAGTCTTACTTCCCTG...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp AGACGGAGCTTATCTGCCATTAAACCACTGCAGGTGCACTGCTTAGCATCCCGTCCACCATTACAGCATTaGATCCCACAAGTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRSLSAIKPLQVHCLASRPPLQH*IPQVRR
Trigger: CCTCCTTACTTGTGGGATCAAATGCTGTAATGGTGG...ACGGGATGCTAAGCAGTGCACCTGCAGTGGTTTAATGGCAGATAAGCTCCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp TGGAGTTCCTCCAGCCATCCAGGGAAGATGCTGGAACAGTACCAGGTGGGTTTTATATGCCTGTTGGCCTaGGGCCCATTAAAGATCATT +
Preference number: 5 (lower is better)
Translates to: WSSSSHPGKMLEQYQVGFICLLA*GPLKII
Trigger: AATGATCTTTAATGGGCCCAAGGCCAACAGGCATAT...AAAACCCACCTGGTACTGTTCCAGCATCTTCCCTGGATGGCTGGAGGAACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS-3UTR CAA 90 bp CACTCCCTTATGCTCAGACCACAAAGGTCTCAGCTTCCTGGGAGGAAGGTGTCGGGGATGAATGTGGACTaGTCTGTTGAAACTTGTAAA +
Preference number: 5 (lower is better)
Translates to: HSLMLRPQRSQLPGRKVSGMNVD*SVETCK
Trigger: TTTACAAGTTTCAACAGACAAGTCCACATTCATCCC...CGACACCTTCCTCCCAGGAAGCTGAGACCTTTGTGGTCTGAGCATAAGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS CAA 90 bp TGCTGCGGCTGCGTGGCGAAGTCCGGGTGGGTGACCATAGAGGTGTaGGCATGGCACGGGGCCGGGGCTGGGCGGGTGGGTGGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: CCGCVAKSGWVTIEV*AWHGAGAGRVGGVG
Trigger: GCCCACTCCACCCACCCGCCCAGCCCCGGCCCCGTGCCATGCCAACACCTCTATGGTCACCCACCCGGACTTCGCCACGCAGCCGCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS GCA 72 bp CCAGGAAGAGGAGGCGCAGCTGCAAACCCCGTACCTTaGGCTCGCGGCCCCACGTGCGCCGCAGCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: PGRGGAAANPVP*ARGPTCAAAAR
Trigger: GCGAGCTGCTGCGGCGCACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGCAGCTGCGCCTCCTCTTCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS GCA 72 bp GTGGGCCAGGCCAGGGCCTCGGGGATCGCCGGTGGCTaGTCCTGGACCTTGCAGGTGGGTGGTGACACTAGC +
Preference number: 6 (lower is better)
Translates to: VGQARASGIAGG*SWTLQVGGDTS
Trigger: GCTAGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCCCGAGGCCCTGGCCTGGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp GGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCTCCTGGGCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: GAGDTSSWPARV*GRPEEPPGRLP
Trigger: GGGGAGCCGCCCAGGAGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318683.7
CDS CAA 72 bp TGCGTGGCGAAGTCCGGGTGGGTGACCATAGAGGTGTaGGCATGGCACGGGGCCGGGGCTGGGCGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: CVAKSGWVTIEV*AWHGAGAGRVG
Trigger: ACCCACCCGCCCAGCCCCGGCCCCGTGCCATGCCAACACCTCTATGGTCACCCACCCGGACTTCGCCACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp GGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCTCCTGGGCGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GAGDTSSWPARV*GRPEEPPGRLL
Trigger: CAGGAGCCGCCCAGGAGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595387.1
ENST00000600777.1
CDS CAA 72 bp TCCAGCAGCCGGTTGACCTTGCGGGCCTCGTGCGGGTaGGAGGCTGTGCCCACCAGGAAGAGGAGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSRLTLRASCG*EAVPTRKRRRS
Trigger: GCTGCGCCTCCTCTTCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS TCA 72 bp CTCCGTGAGTCTGTGCCTCCAGCTCCAGCAGCCGGTTaGCCTTGCGGGCCTCGTGCGGGTTGGAGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LRESVPPAPAAG*PCGPRAGWRLC
Trigger: GCACAGCCTCCAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCTGGAGCTGGAGGCACAGACTCACGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS GCA 72 bp TTGGAGGCTGTGCCCACCAGGAAGAGGAGGCGCAGCTaGAAACCCCGTACCTTGCGCTCGCGGCCCCACGTG +
Preference number: 6 (lower is better)
Translates to: LEAVPTRKRRRS*KPRTLRSRPHV
Trigger: CACGTGGGGCCGCGAGCGCAAGGTACGGGGTTTGCAGCTGCGCCTCCTCTTCCTGGTGGGCACAGCCTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS GCA 72 bp TCCAGCTCCAGCAGCCGGTTGACCTTGCGGGCCTCGTaGGGGTTGGAGGCTGTGCCCACCAGGAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSSSSRLTLRAS*GLEAVPTRKRR
Trigger: CCTCCTCTTCCTGGTGGGCACAGCCTCCAACCCGCACGAGGCCCGCAAGGTCAACCGGCTGCTGGAGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CCA 72 bp TGGCATTGGGCCGCCGGTGCCGGAGATACTTCATCCTaGCCAGCCAGGGTCTGGGGTCGGCCTGAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: WHWAAGAGDTSS*PARVWGRPEEP
Trigger: AGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp CAGGCCAGGGCCTCGGGGATCGCCGGTGGCTGCTCCTaGACCTTGCAGGTGGGTGGTGACACTAGCAGACTG +
Preference number: 6 (lower is better)
Translates to: QARASGIAGGCS*TLQVGGDTSRL
Trigger: CAGTCTGCTAGTGTCACCACCCACCTGCAAGGTCCAGGAGCAGCCACCGGCGATCCCCGAGGCCCTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp GGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGTCTaGGGTCGGCCTGAGGAGCCTCCTGGGCGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GAGDTSSWPARV*GRPEEPPGRLL
Trigger: AAGGAGCCGCCCAGGAGGCTCCTCAGGCCGACCCCAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599265.5
CDS TCA 72 bp CCAAGACATGGGCAGCACGGCGCAGGGCAGCGGCCGTaGAGCGGGACAGCAAGAAGCCACCACCCCCACAAT +
Preference number: 6 (lower is better)
Translates to: PRHGQHGAGQRP*SGTARSHHPHN
Trigger: ATTGTGGGGGTGGTGGCTTCTTGCTGTCCCGCTTCACGGCCGCTGCCCTGCGCCGTGCTGCCCATGTCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS CAA 90 bp CAGCAGCAGGTCTCGGTAGAAGCAGGGGTCAAAGGAGGACAGGCGTaGCGATGGAGCCCGCACGCCAGACGTGCGGATGCCGCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: QQQVSVEAGVKGGQA*RWSPHARRADAAVG
Trigger: TCCCACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTTGACCCCTGCTTCTACCGAGACCTGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 72 bp CCGATGGCCAGAATGAGGGTGGCATTGGGCCGCCGGTaGCGGAGATACTTCATCCTGGCCAGCCAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PMARMRVALGRR*RRYFILASQGL
Trigger: CAGACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCTGGCCATCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp GTAGAAGCAGGGGTCAAAGGAGGACAGGCGTTGCGATaGAGCCCGCACGCCAGACGTGCGGATGCCGCTGTG +
Preference number: 6 (lower is better)
Translates to: VEAGVKGGQALR*SPHARRADAAV
Trigger: CACAGCGGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTTGACCCCTGCTTCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS CAA 72 bp GTCTCGGTAGAAGCAGGGGTCAAAGGAGGACAGGCGTaGCGATGGAGCCCGCACGCCAGACGTGCGGATGCC +
Preference number: 6 (lower is better)
Translates to: VSVEAGVKGGQA*RWSPHARRADA
Trigger: GGCATCCGCACGTCTGGCGTGCGGGCTCCATCGCAACGCCTGTCCTCCTTTGACCCCTGCTTCTACCGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 72 bp GTGGAAGTCCCACTGCAGGATGTCTCCGTGAGTCTGTaGCTCCAGCTCCAGCAGCCGGTTGACCTTGCGGGC +
Preference number: 6 (lower is better)
Translates to: VEVPLQDVSVSL*LQLQQPVDLAG
Trigger: GCCCGCAAGGTCAACCGGCTGCTGGAGCTGGAGGCACAGACTCACGGAGACATCCTGCAGTGGGACTTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CAA 72 bp AGGGTGAAAGCGCCGATGGCCAGAATGAGGGTGGCATaGGGCCGCCGGTGCCGGAGATACTTCATCCTGGCC +
Preference number: 6 (lower is better)
Translates to: RVKAPMARMRVA*GRRCRRYFILA
Trigger: GGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCGCTTTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CAA 90 bp AAGAGGAGGAGGGTGAAAGCGCCGATGGCCAGAATGAGGGTGGCATaGGGCCGCCGGTGCCGGAGATACTTCATCCTGGCCAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: KRRRVKAPMARMRVA*GRRCRRYFILASQG
Trigger: ACCCTGGCTGGCCAGGATGAAGTATCTCCGGCACCGGCGGCCCAATGCCACCCTCATTCTGGCCATCGGCGCTTTCACCCTCCTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
ENST00000600777.1
CDS CCA 72 bp GCGGGACAGCAAGAAGCCACCACCCCCACAATAGGGTaGGTACCGCTCATTCTGAGTCACCACCTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: AGQQEATTPTIG*VPLILSHHLWH
Trigger: GTGCCAGAGGTGGTGACTCAGAATGAGCGGTACCCACCCTATTGTGGGGGTGGTGGCTTCTTGCTGTCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS CCA 72 bp AGGAAGACATCATCAATGGGGAAGATGTCCAAGACATaGGCAGCACGGCGCAGGGCAGCGGCCGTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: RKTSSMGKMSKT*AARRRAAAVKR
Trigger: CCGCTTCACGGCCGCTGCCCTGCGCCGTGCTGCCCATGTCTTGGACATCTTCCCCATTGATGATGTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 72 bp TTGAGCACGAAGCTGGCGTTGGCGCACCTTGTCTCCTaGCACTGTAAGAACAGGACCTGCTTGAGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: LSTKLALAHLVS*HCKNRTCLSVR
Trigger: CCTCACGCTCAAGCAGGTCCTGTTCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CAA 90 bp GTGTGTGCAAAGACGTCATCATCCCCGTTGAGCACGAAGCTGGCGTaGGCGCACCTTGTCTCCTGCCACTGTAAGAACAGGACCTGCTTG +
Preference number: 6 (lower is better)
Translates to: VCAKTSSSPLSTKLA*AHLVSCHCKNRTCL
Trigger: CAAGCAGGTCCTGTTCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CAA 72 bp AAGACGTCATCATCCCCGTTGAGCACGAAGCTGGCGTaGGCGCACCTTGTCTCCTGCCACTGTAAGAACAGG +
Preference number: 6 (lower is better)
Translates to: KTSSSPLSTKLA*AHLVSCHCKNR
Trigger: CCTGTTCTTACAGTGGCAGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS TCA 72 bp TGTTGTCTGTGTGTGCAAAGACGTCATCATCCCCGTTaGGCACGAAGCTGGCGTTGGCGCACCTTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: CCLCVQRRHHPR*ARSWRWRTLSP
Trigger: AGGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACACAGACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CAA 72 bp ATGTTGTCTGTGTGTGCAAAGACGTCATCATCCCCGTaGAGCACGAAGCTGGCGTTGGCGCACCTTGTCTCC +
Preference number: 6 (lower is better)
Translates to: MLSVCAKTSSSP*STKLALAHLVS
Trigger: GGAGACAAGGTGCGCCAACGCCAGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACACAGACAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5
CDS CCA 72 bp ATAGGGTGGGTACCGCTCATTCTGAGTCACCACCTCTaGCACATAGTACTTGCTCCAAAAAGCCCGGATGGG +
Preference number: 6 (lower is better)
Translates to: IGWVPLILSHHL*HIVLAPKSPDG
Trigger: CCCATCCGGGCTTTTTGGAGCAAGTACTATGTGCCAGAGGTGGTGACTCAGAATGAGCGGTACCCACCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318683.7
ENST00000595387.1
CDS GCA 72 bp ATGGTCCTGCAGGTAGAAGACCATGTTGTCTGTGTGTaGAAAGACGTCATCATCCCCGTTGAGCACGAAGCT +
Preference number: 6 (lower is better)
Translates to: MVLQVEDHVVCV*KDVIIPVEHEA
Trigger: AGCTTCGTGCTCAACGGGGATGATGACGTCTTTGCACACACAGACAACATGGTCTTCTACCTGCAGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318683.7
ENST00000595387.1
ENST00000599265.5