RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GLCT (Homo sapiens)

Ensembl gene IDs: ENSG00000187676

Ensembl transcript IDs: ENST00000343307.5, ENST00000461652.2

Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAGTaGGATGAGGCCACAGTCTCCAGTTCATTCCCTGCGCAGGCTAGG +
Preference number: 1 (lower is better)
Translates to: TQCHVADTSVVSTAQ*DEATVSSSFPAQAR
Trigger: CCTAGCCTGCGCAGGGAATGAACTGGAGACTGTGGCCTCATCCCACTGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR CCA 90 bp CATGTTGTTCTCTCAGTGGTAACAGTTAGTAGGCCAGAGCAGAACTaGAGACTCTTTTCCACTGGTGTAGGCAGCCAGGGCTCTCCAGGA +
Preference number: 1 (lower is better)
Translates to: HVVLSVVTVSRPEQN*RLFSTGVGSQGSPG
Trigger: TCCTGGAGAGCCCTGGCTGCCTACACCAGTGGAAAAGAGTCTCCAGTTCTGCTCTGGCCTACTAACTGTTACCACTGAGAGAACAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 90 bp ATACTGTGTTCAAATGTCATTCTTTGGGAACCCAGAGAAATTGCCTaGTCACCATGCTGTCCTTCCACAAGGGGTTTCTCTCCTGAGTCA +
Preference number: 1 (lower is better)
Translates to: ILCSNVILWEPREIA*SPCCPSTRGFSPES
Trigger: TGACTCAGGAGAGAAACCCCTTGTGGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGAACACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 90 bp GTCACATCTCTCCAGGCTCATGCCCAACTGAAACTTCCATTACAATaGAGAGACAGAACAGGAAAGGGACTTCTGGTACCATTTATTTCC +
Preference number: 1 (lower is better)
Translates to: VTSLQAHAQLKLPLQ*RDRTGKGLLVPFIS
Trigger: GGAAATAAATGGTACCAGAAGTCCCTTTCCTGTTCTGTCTCTTCATTGTAATGGAAGTTTCAGTTGGGCATGAGCCTGGAGAGATGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR GCA 90 bp AATCAGACCACAGAAGAAAGCTTGACAAGGATCTTCATATACGGATaGCAGCTTCAATCATGTCAAATGAACATGTTGTTCTCTCAGTGG +
Preference number: 1 (lower is better)
Translates to: NQTTEESLTRIFIYG*QLQSCQMNMLFSQW
Trigger: CCACTGAGAGAACAACATGTTCATTTGACATGATTGAAGCTGGCATCCGTATATGAAGATCCTTGTCAAGCTTTCTTCTGTGGTCTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 90 bp AATAGCCATTTGGAAGGAAAGCCCTATTTCAAAGCAAAGGAAATGTaGGTAAGACAATATCTGGTCCTGGAAATGTCAGACTCAAAATTG +
Preference number: 1 (lower is better)
Translates to: NSHLEGKPYFKAKEM*VRQYLVLEMSDSKL
Trigger: CAATTTTGAGTCTGACATTTCCAGGACCAGATATTGTCTTACTCACATTTCCTTTGCTTTGAAATAGGGCTTTCCTTCCAAATGGCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGTGAGCACAGCACAGTaGGATGAGGCCACAGTCTCC +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPVSTAQ*DEATVS
Trigger: GGAGACTGTGGCCTCATCCCACTGTGCTGTGCTCAC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTGAGCCTCTCATCAGCTaGTCATCCCTGATACATCCC +
Preference number: 2 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPEPLIS*SSLIHP
Trigger: GGGATGTATCAGGGATGATCAGCTGATGAGAGGCTC...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACAAGGGGTTTCTCTCCTaGGTCAGGAGAGAGTCATTA +
Preference number: 2 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNKGFLS*VRRESL
Trigger: TAATGACTCTCTCCTGACTCAGGAGAGAAACCCCTT...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR GCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCAAGTACCAGAGGAGGTaGCCCGGTATCAGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPKYQRR*PGISRR
Trigger: CCTTCTACTGATACCGGGGCACCTCCTCTGGTACTT...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR CAA 90 bp TCAAAATACTGTGTTCAAATGTCATTCTTTGGGAACCCAGAGAAATaGCCTGATCACCATGCTGTCCTTCCACAAGGGGTTTCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SKYCVQMSFFGNPEK*PDHHAVLPQGVSLL
Trigger: CAGGAGAGAAACCCCTTGTGGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGAACACAGTATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCAGACACAAGTGTTGTaGGCACAGCACAGTGGGATG +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYQTQVL*AQHSGM
Trigger: CATCCCACTGTGCTGTGCTCACAACACTTGTGTCTG...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCCAGAGAAATTGCCTaGTCACCATGCTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYPREIA*SPCCPS
Trigger: GGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGG...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCCCCAGTTACAATGACTaGACAAAGCTAAGGCCATCA +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPPSYND*TKLRPS
Trigger: TGATGGCCTTAGCTTTGTTCAGTCATTGTAACTGGG...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR GCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACTCAGGAAGCACCCAATaGCATGTGGCAGACACAAGT +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYSGSTQ*HVADTS
Trigger: ACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGA...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCCAGGAAAGGGACTTCTaGTACCATTTATTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPQERDF*YHLFPC
Trigger: ACAGGGAAATAAATGGTACCAGAAGTCCCTTTCCTG...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCTCACATAGAGCTTGCTaGCTTGAACAAAACATGTCA +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPSHRAC*LEQNMS
Trigger: TGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGA...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR GCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTATCTTCATATACGGATaGCAGCTTCAATCATGTCAA +
Preference number: 2 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPIFIYG*QLQSCQ
Trigger: TTGACATGATTGAAGCTGGCATCCGTATATGAAGAT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGAGGACACTATTTTCTaGCAGCATCTACTACTTTCA +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPEDTIF*QHLLLS
Trigger: TGAAAGTAGTAGATGCTGCCAGAAAATAGTGTCCTC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCTCAAATGTCATTCTTTaGGAACCCAGAGAAATTGCC +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPSNVIL*EPREIA
Trigger: GGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGA...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTACACACAGGTACTTTTaGTGGTATGGCTTTAAATTC +
Preference number: 2 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPTHRYF*WYGFKF
Trigger: GAATTTAAAGCCATACCACCAAAAGTACCTGTGTGT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCCACAGGTACTTTTGGTaGTATGGCTTTAAATTCTGT +
Preference number: 2 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPHRYFW*YGFKFC
Trigger: ACAGAATTTAAAGCCATACCACCAAAAGTACCTGTG...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACGATACATCCCTTGGATaGCCACAGAATCCATTTTCA +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYDTSLG*PQNPFS
Trigger: TGAAAATGGATTCTGTGGCCATCCAAGGGATGTATC...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAAAACTTCCATTACAATaGAGAGACAGAACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: NSLPETHIELADLNKTCQKLPLQ*RDRTGK
Trigger: CTTTCCTGTTCTGTCTCTTCATTGTAATGGAAGTTT...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATAGGCTCATGCCCAACTaGAACTTCCATTACAATGAA +
Preference number: 2 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNRLMPN*NFHYNE
Trigger: TTCATTGTAATGGAAGTTTCAGTTGGGCATGAGCCT...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR TCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACGAGTACTATTATAGATaGCATGAAGGTGACTACCAC +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYEYYYR*HEGDYH
Trigger: GTGGTAGTCACCTTCATGTCATCTATAATAGTACTC...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATTGCTGTATCACAGCTTaGAGAATACACAGTCATCAC +
Preference number: 2 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNCCITA*RIHSHH
Trigger: GTGATGACTGTGTATTCTCCAAGCTGTGATACAGCA...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACTCAGACAACCTGCTTTaGCTATATCATCAGAAATGG +
Preference number: 2 (lower is better)
Translates to: NKRSSINPEMQTALIFTYSDNLL*LYHQKW
Trigger: CCATTTCTGATGATATAGCCAAAGCAGGTTGTCTGA...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATAAGATCTTTTACTTGTaGTTAGGCTTACACCATTCC +
Preference number: 2 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNKIFYL*LGLHHS
Trigger: GGAATGGTGTAAGCCTAACCACAAGTAAAAGATCTT...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 72 bp GGCAGACACAAGTGTTGTGAGCACAGCACAGTGGGATaGGGCCACAGTCTCCAGTTCATTCCCTGCGCAGGC +
Preference number: 3 (lower is better)
Translates to: GRHKCCEHSTVG*GHSLQFIPCAG
Trigger: GCCTGCGCAGGGAATGAACTGGAGACTGTGGCCTCATCCCACTGTGCTGTGCTCACAACACTTGTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 72 bp CTCCAGGCTCATGCCCAACTGAAACTTCCATTACAATaGAGAGACAGAACAGGAAAGGGACTTCTGGTACCA +
Preference number: 3 (lower is better)
Translates to: LQAHAQLKLPLQ*RDRTGKGLLVP
Trigger: TGGTACCAGAAGTCCCTTTCCTGTTCTGTCTCTTCATTGTAATGGAAGTTTCAGTTGGGCATGAGCCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 72 bp TCAAATGTCATTCTTTGGGAACCCAGAGAAATTGCCTaGTCACCATGCTGTCCTTCCACAAGGGGTTTCTCT +
Preference number: 3 (lower is better)
Translates to: SNVILWEPREIA*SPCCPSTRGFS
Trigger: AGAGAAACCCCTTGTGGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR GCA 72 bp GTGTTCAAATGTCATTCTTTGGGAACCCAGAGAAATTaGCTGATCACCATGCTGTCCTTCCACAAGGGGTTT +
Preference number: 3 (lower is better)
Translates to: VFKCHSLGTQRN*LITMLSFHKGF
Trigger: AAACCCCTTGTGGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CAA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTCTGCTGTATCACAGCTaGGAGAATACACAGTCATCA +
Preference number: 3 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPLLYHS*ENTQSS
Trigger: TGATGACTGTGTATTCTCCAAGCTGTGATACAGCAG...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CAA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTGCAAAGATCTTTTACTaGTGGTTAGGCTTACACCAT +
Preference number: 3 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPAKIFY*WLGLHH
Trigger: ATGGTGTAAGCCTAACCACAAGTAAAAGATCTTTGC...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CAA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTATAGAGCTTGCTGACTaGAACAAAACATGTCAACAT +
Preference number: 3 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPIELAD*NKTCQH
Trigger: ATGTTGACATGTTTTGTTCAAGTCAGCAAGCTCTAT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 72 bp TTGGAAGGAAAGCCCTATTTCAAAGCAAAGGAAATGTaGGTAAGACAATATCTGGTCCTGGAAATGTCAGAC +
Preference number: 3 (lower is better)
Translates to: LEGKPYFKAKEM*VRQYLVLEMSD
Trigger: GTCTGACATTTCCAGGACCAGATATTGTCTTACTCACATTTCCTTTGCTTTGAAATAGGGCTTTCCTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACACTGAATCCAATGCATaGTGTTATCACTGCAACACG +
Preference number: 3 (lower is better)
Translates to: NKRSSINPEMQTALIFTYTESNA*CYHCNT
Trigger: CGTGTTGCAGTGATAACACAATGCATTGGATTCAGT...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR TCA 72 bp ATAAAGATAGGGCTTCAGGGAGAAATAAAACACAGATaGACTTCCAAAGCAATACGAAGCTCTAGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: IKIGLQGEIKHR*TSKAIRSSSRR
Trigger: TCTTCTGCTAGAGCTTCGTATTGCTTTGGAAGTTCATCTGTGTTTTATTTCTCCCTGAAGCCCTATCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR GCA 72 bp TTTCAAGATGTAAAAATCCTACATAGTCAGACAACCTaGTTTGGCTATATCATCAGAAATGGCTTAAAAGCA +
Preference number: 3 (lower is better)
Translates to: FQDVKILHSQTT*FGYIIRNGLKA
Trigger: TGCTTTTAAGCCATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATCTTGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
3UTR GCA 72 bp TACATACCCATACATAGCATCATTTGTGATTTAGCATaGTATTATTGTTTTCTGCTCCTAGGCATTCTAGAA +
Preference number: 3 (lower is better)
Translates to: YIPIHSIICDLA*YYCFLLLGILE
Trigger: TTCTAGAATGCCTAGGAGCAGAAAACAATAATAGCATGCTAAATCACAAATGATGCTATGTATGGGTATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACACACAGCACAGTGGGATaGGGCCACAGTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTHSTVG*GHSLQF
Trigger: GAACTGGAGACTGTGGCCTCATCCCACTGTGCTGTG...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAGTGAGCACAGCACAGTaGGATGAGGCCACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTVSTAQ*DEATVS
Trigger: GGAGACTGTGGCCTCATCCCACTGTGCTGTGCTCAC...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACATCAGCTGATCATCCCTaGTACATCCCTTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTSADHP*YIPWMA
Trigger: GGCCATCCAAGGGATGTATCAGGGATGATCAGCTGA...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGCTGAGCGCCCTACCTaGGCGCGGGGAAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPAERPT*ARGRET
Trigger: CGTCTCCCTTCCCCGCGCCCAGGTAGGGCGCTCAGC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACACACTATAGTATTCAATaGGACTTGCCTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTHYSIQ*DLPGSP
Trigger: GGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTG...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTTCCACCGGCCGAGCCTaGTGGAAGAGAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPSTGRA*WKRGLC
Trigger: ACACAGCCCTCTCTTCCATCAGGCTCGGCCGGTGGA...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATAAGCCAGGGAGCAGGTaGGGAGCGCGAGCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNKPGSR*GARAAP
Trigger: CGGCGCTGCTCGCGCTCCTCACCTGCTCCCTGGCTT...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAAGAAGTCCACGTCATTaGTACAAAACTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTRSPRH*YKTQAL
Trigger: CAGTGCCTGAGTTTTGTACCAATGACGTGGACTTCT...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAGTAACAACGGAAGTATaGTCCATGCACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTVTTEV*SMHLLV
Trigger: AACAAGAAGGTGCATGGACCATACTTCCGTTGTTAC...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTACAAAACTCAGGCACTaGGGTCAGGGGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPTKLRH*GQGRSS
Trigger: GGAGGACCTCCCCTGACCCCAGTGCCTGAGTTTTGT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGAGCCTCTCATCAGCTaGTCATCCCTGATACATCCC +
Preference number: 4 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNEPLIS*SSLIHP
Trigger: GGGATGTATCAGGGATGATCAGCTGATGAGAGGCTC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACAGCTGTAGCCACCAGTaGCCAGGCCGTAGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: NKRSSINPEMQTALIFTYSCSHQ*PGRSRS
Trigger: GCTACGGCTACGGCCTGGGCACTGGTGGCTACAGCT...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACATCAGACAACCTGCTTTaGCTATATCATCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTSDNLL*LYHQKW
Trigger: CCATTTCTGATGATATAGCCAAAGCAGGTTGTCTGA...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTCAGACACAAGTGTTGTaGGCACAGCACAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPQTQVL*AQHSGM
Trigger: CATCCCACTGTGCTGTGCTCACAACACTTGTGTCTG...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTCCCAGAGAAATTGCCTaGTCACCATGCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPPREIA*SPCCPS
Trigger: GGAAGGACAGCATGGTGATCAGGCAATTTCTCTGGG...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAAAATGCAGACAGCACTaGTATTTACATACCCATACA +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTKCRQH*YLHTHT
Trigger: TGTATGGGTATGTAAATATCAGTGCTGTCTGCATTT...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTAAGTACCAGAGGAGGTaGCCCGGTATCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPKYQRR*PGISRR
Trigger: CCTTCTACTGATACCGGGGCACCTCCTCTGGTACTT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GTCAGGAAGCACCCAATGCCATGTGGCAGACACAAGTGTTGTGAGCACAGCACAAAGATCTTTTACTTGTaGTTAGGCTTACACCATTCC +
Preference number: 4 (lower is better)
Translates to: VRKHPMPCGRHKCCEHSTKIFYL*LGLHHS
Trigger: GGAATGGTGTAAGCCTAACCACAAGTAAAAGATCTT...TGTGCTGTGCTCACAACACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAGAGACTCTTTTCCACTaGTGTAGGCAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQETLFH*CRQPGL
Trigger: GAGCCCTGGCTGCCTACACCAGTGGAAAAGAGTCTC...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTGTATTCAATGAGACTTaGCTGGCTCTCCCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPVFNET*LALPSL
Trigger: CAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATAC...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACCATCGGGAGCATCATTaGTGTAGCATCGACATTTAC +
Preference number: 4 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNHREHH*CSIDIY
Trigger: GTAAATGTCGATGCTACAGCAATGATGCTCCCGATG...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTTCAATGAGACTTGCCTaGCTCTCCCAAGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPSMRLA*LSQVCL
Trigger: TAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGA...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCTGGGTGCCAACCATGTaGAATACACCTTCACTGGAT +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPWVPTM*NTPSLD
Trigger: ATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCA...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAATCAGGAAGCACCCAATaGCATGTGGCAGACACAAGT +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQSGSTQ*HVADTS
Trigger: ACTTGTGTCTGCCACATGGCATTGGGTGCTTCCTGA...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTCAGCTAAGCAAGTGCTaGAGCCTGGAGATACTTATT +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPQLSKC*SLEILI
Trigger: AATAAGTATCTCCAGGCTCCAGCACTTGCTTAGCTG...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAAAGGGGTTTCTCTCCTaGGTCAGGAGAGAGTCATTA +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQKGFLS*VRRESL
Trigger: TAATGACTCTCTCCTGACTCAGGAGAGAAACCCCTT...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGAGTACTATTATAGATaGCATGAAGGTGACTACCAC +
Preference number: 4 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNEYYYR*HEGDYH
Trigger: GTGGTAGTCACCTTCATGTCATCTATAATAGTACTC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTGCCTGCAGCAAAGTCTaGATACTTAAAAACTGTAGG +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPACSKV*ILKNCR
Trigger: CCTACAGTTTTTAAGTATCCAGACTTTGCTGCAGGC...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACCATGCTGTTTTGTCCTaGCTACGATTCAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNHAVLS*LRFRNL
Trigger: AAGATTTCTGAATCGTAGCCAGGACAAAACAGCATG...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGAAATACACCTTCACTaGATCGATGTTCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNEIHLH*IDVPVF
Trigger: AAACACTGGAACATCGATCCAGTGAAGGTGTATTTC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTGATACATCCCTTGGATaGCCACAGAATCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPDTSLG*PQNPFS
Trigger: TGAAAATGGATTCTGTGGCCATCCAAGGGATGTATC...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATGCGCACAGGTCACCCTaGTTTATAACTCCTCTCGAA +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNAHRSP*FITPLE
Trigger: TTCGAGAGGAGTTATAAATCAGGGTGACCTGTGCGC...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTTCACATAGAGCTTGCTaGCTTGAACAAAACATGTCA +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPSHRAC*LEQNMS
Trigger: TGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGA...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCGGAAGTATGGTCCATaGACCTTCTTGTTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NKRSSINPEMQTALIFTYRKYGP*TFLFSQ
Trigger: CTGGCTAAACAAGAAGGTGCATGGACCATACTTCCG...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTTCAAATGTCATTCTTTaGGAACCCAGAGAAATTGCC +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPSNVIL*EPREIA
Trigger: GGCAATTTCTCTGGGTTCCCAAAGAATGACATTTGA...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTTATCATCATCCACAATaGCTAACCATGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPYHHPQ*LTMLFC
Trigger: ACAAAACAGCATGGTTAGTCATTGTGGATGATGATA...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAAGGCTCATGCCCAACTaGAACTTCCATTACAATGAA +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQRLMPN*NFHYNE
Trigger: TTCATTGTAATGGAAGTTTCAGTTGGGCATGAGCCT...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAATGGCTCTCCCAAGTCTaGTTAACAATAGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQWLSQV*LTIGIL
Trigger: CAGAATACCTATTGTTAAGCAGACTTGGGAGAGCCA...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATGTCTTCGTCACTGGGTaGCAACCATGTGAAATACAC +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNVFVTG*QPCEIH
Trigger: GTGTATTTCACATGGTTGGCACCCAGTGACGAAGAC...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGTTTGTGGAACGATATaGGAACTTGATGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPVCGTI*ELDEKG
Trigger: ACCTTTCTCATCAAGTTCCCATATCGTTCCACAAAC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATCTTTTCTCCAAATCCTaGGACTGCTTGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNLFSKS*DCLTSF
Trigger: GAAAGAGGTCAAGCAGTCTCAGGATTTGGAGAAAAG...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCAAACTTCCATTACAATaGAGAGACAGAACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPKLPLQ*RDRTGK
Trigger: CTTTCCTGTTCTGTCTCTTCATTGTAATGGAAGTTT...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATTATCACTGCAACACGTaGGGTCTGGTAGTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNYHCNT*GLVVAN
Trigger: ATTAGCAACTACCAGACCTCACGTGTTGCAGTGATA...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATCAATCCCAGTTACAATaGCTGAACAAAGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNQSQLQ*LNKAKA
Trigger: GGCCTTAGCTTTGTTCAGTCATTGTAACTGGGATTG...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGGTTTCCAAGAGTTTTaGAATCTGTATTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPGFQEF*NLYSCL
Trigger: GAGACAAGAATACAGATTCCAAAACTCTTGGAAACC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACTGCTGTATCACAGCTTaGAGAATACACAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: NKRSSINPEMQTALIFTYCCITA*RIHSHH
Trigger: GTGATGACTGTGTATTCTCCAAGCTGTGATACAGCA...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAGAGGACACTATTTTCTaGCAGCATCTACTACTTTCA +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQEDTIF*QHLLLS
Trigger: TGAAAGTAGTAGATGCTGCCAGAAAATAGTGTCCTC...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCACACACAGGTACTTTTaGTGGTATGGCTTTAAATTC +
Preference number: 4 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPTHRYF*WYGFKF
Trigger: GAATTTAAAGCCATACCACCAAAAGTACCTGTGTGT...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAACACAGGTACTTTTGGTaGTATGGCTTTAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQHRYFW*YGFKFC
Trigger: ACAGAATTTAAAGCCATACCACCAAAAGTACCTGTG...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR TCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATAATCCTGAGACTGCTTaGCCTCTTTCTTTGTATCTT +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNNPETA*PLSLYL
Trigger: AAGATACAAAGAAAGAGGTCAAGCAGTCTCAGGATT...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACATCTTCATATACGGATaGCAGCTTCAATCATGTCAA +
Preference number: 4 (lower is better)
Translates to: NKRSSINPEMQTALIFTYIFIYG*QLQSCQ
Trigger: TTGACATGATTGAAGCTGGCATCCGTATATGAAGAT...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATGCAAGTGCTGGAGCCTaGAGATACTTATTAATGTAT +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNASAGA*RYLLMY
Trigger: ATACATTAATAAGTATCTCCAGGCTCCAGCACTTGC...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACGACAATATCTGGTCCTaGAAATGTCAGACTCAAAAT +
Preference number: 4 (lower is better)
Translates to: NKRSSINPEMQTALIFTYDNIWS*KCQTQN
Trigger: ATTTTGAGTCTGACATTTCCAGGACCAGATATTGTC...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CCA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAACTAAAAATAGCCATTTaGAAGGAAAGCCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: NSLPETHIELADLNKTCQLKIAI*KESPIS
Trigger: TGAAATAGGGCTTTCCTTCCAAATGGCTATTTTTAG...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR GCA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATTATGTTACAGAAAAATaGGGTAACAACGGAAGTATG +
Preference number: 4 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNYVTEK*GNNGSM
Trigger: CATACTTCCGTTGTTACCGCATTTTTCTGTAACATA...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CCA 90 bp CAGGCGGGCGGCCGCATCCTGGCGGCGGAGGCTGAGCGCCCTACCTaGGCGCGGGGAAGGGAGACGCGCGGGGAGCGGAGCTGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: QAGGRILAAEAERPT*ARGRETRGERSCAA
Trigger: AGCGGCGCAGCTCCGCTCCCCGCGCGTCTCCCTTCCCCGCGCCCAGGTAGGGCGCTCAGCCTCCGCCGCCAGGATGCGGCCGCCCGCCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CCA 90 bp GGTAGCACAGTAGAAGTCCACGTCATTGGTACAAAACTCAGGCACTaGGGTCAGGGGAGGTCCTCCGCCTTTGTCCCAGATGTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GSTVEVHVIGTKLRH*GQGRSSAFVPDVEG
Trigger: GCCCTCTACATCTGGGACAAAGGCGGAGGACCTCCCCTGACCCCAGTGCCTGAGTTTTGTACCAATGACGTGGACTTCTACTGTGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343307.5
ENST00000461652.2
CDS TCA 90 bp GTGTCTCCTGCCTGGCTTTGTCTTCGTCACTGGGTGCCAACCATGTaGAATACACCTTCACTGGATCGATGTTCCAGTGTTTGTGGAACG +
Preference number: 5 (lower is better)
Translates to: VSPAWLCLRHWVPTM*NTPSLDRCSSVCGT
Trigger: CGTTCCACAAACACTGGAACATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGACGAAGACAAAGCCAGGCAGGAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGTCTCCTGCCTGGCTTaGTCTTCGTCACTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNVSCLA*SSSLGA
Trigger: GGCACCCAGTGACGAAGACAAAGCCAGGCAGGAGAC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGGGAACCCAGAGAAATaGCCTGATCACCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNGNPEK*PDHHAV
Trigger: GACAGCATGGTGATCAGGCAATTTCTCTGGGTTCCC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGGTCCATGCACCTTCTaGTTTAGCCAGCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNGPCTF*FSQLMK
Trigger: CTTCATCAGCTGGCTAAACAAGAAGGTGCATGGACC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CCA 90 bp TTTGTCTTCGTCACTGGGTGCCAACCATGTGAAATACACCTTCACTaGATCGATGTTCCAGTGTTTGTGGAACGATATGGGAACTTGATG +
Preference number: 5 (lower is better)
Translates to: FVFVTGCQPCEIHLH*IDVPVFVERYGNLM
Trigger: CATCAAGTTCCCATATCGTTCCACAAACACTGGAACATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGACGAAGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CTGATCATCCCTGATACATCCCTTGGATGGCCACAGAATCCATTTTCACAAAACGAACGATATGGGAACTaGATGAGAAAGGTAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LIIPDTSLGWPQNPFSQNERYGN*MRKVVL
Trigger: AAGGACTACCTTTCTCATCAAGTTCCCATATCGTTC...GTTTTGTGAAAATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCTCGATGTTCCAGTGTTaGTGGAACGATATGGGAACT +
Preference number: 5 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPSMFQC*WNDMGT
Trigger: AGTTCCCATATCGTTCCACAAACACTGGAACATCGA...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACTCCCTGATACATCCCTaGGATGGCCACAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: NKRSSINPEMQTALIFTYSLIHP*DGHRIH
Trigger: ATGGATTCTGTGGCCATCCAAGGGATGTATCAGGGA...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS GCA 90 bp AGGAATGGAATTTTCAGTATAGTCACTATAGTATTCAATGAGACTTaGCTGGCTCTCCCAAGTCTGCTTAACAATAGGTACCCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: RNGIFSIVTIVFNET*LALPSLLNNRYPER
Trigger: CCTTTCTGGGTACCTATTGTTAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTGACTATACTGAAAATTCCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461652.2
CDS-3UTR CAA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCACTGAATCCAATGCATaGTGTTATCACTGCAACACG +
Preference number: 5 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPTESNA*CYHCNT
Trigger: CGTGTTGCAGTGATAACACAATGCATTGGATTCAGT...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AATTCACTTCCTGAGACTCACATAGAGCTTGCTGACTTGAACAAAACATGTCAAGCCATCAGTATAGGCTaGAAGCGATCTAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: NSLPETHIELADLNKTCQAISIG*KRSRNP
Trigger: AGGATTTCTAGATCGCTTCAAGCCTATACTGATGGC...TTGACATGTTTTGTTCAAGTCAGCAAGCTCTATGTGAGTCTCAGGAAGTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp CAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACCCGTCAGACAACCTGCTTaGGCTATATCATCAGAAATG +
Preference number: 5 (lower is better)
Translates to: QEVFNKPRNADSTDIYIPVRQPA*AISSEM
Trigger: CATTTCTGATGATATAGCCAAAGCAGGTTGTCTGAC...GGGTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS TCA 90 bp AGTGCTGGAGCCTGGAGATACTTATTAATGTATCATCATCCACAATaGCTAACCATGCTGTTTTGTCCTGGCTACGATTCAGAAATCTTT +
Preference number: 5 (lower is better)
Translates to: SAGAWRYLLMYHHPQ*LTMLFCPGYDSEIF
Trigger: AAAGATTTCTGAATCGTAGCCAGGACAAAACAGCATGGTTAGTCATTGTGGATGATGATACATTAATAAGTATCTCCAGGCTCCAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS GCA 90 bp AGGAATGGAATTTTCAGTATAGTCACTATAGTATTCAATGAGACTTaGCTGGCTCTCCCAAGTCTGCTTAACAATAGGTATTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: RNGIFSIVTIVFNET*LALPSLLNNRYSVT
Trigger: GGTGACAGAATACCTATTGTTAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTGACTATACTGAAAATTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp ATCCCTGATGTTAACATCCCTAGCCTAAAAATAGCCATTTGGAAGGAAAGCCCTAGTCTCTTGGTAAGCTaGTTTACAAGTGGAATACTT +
Preference number: 5 (lower is better)
Translates to: IPDVNIPSLKIAIWKESPSLLVS*FTSGIL
Trigger: AAGTATTCCACTTGTAAACAAGCTTACCAAGAGACT...AGGGCTTTCCTTCCAAATGGCTATTTTTAGGCTAGGGATGTTAACATCAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACACTAACCATGCTGTTTaGTCCTGGCTACGATTCAGA +
Preference number: 5 (lower is better)
Translates to: NKRSSINPEMQTALIFTYTNHAV*SWLRFR
Trigger: TCTGAATCGTAGCCAGGACAAAACAGCATGGTTAGT...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATCTGCTGTATCACAGCTaGGAGAATACACAGTCATCA +
Preference number: 5 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNLLYHS*ENTQSS
Trigger: TGATGACTGTGTATTCTCCAAGCTGTGATACAGCAG...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACGGGTTTCCAAGAGTTTaGGAATCTGTATTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: NKRSSINPEMQTALIFTYGFPRV*ESVFLS
Trigger: AGACAAGAATACAGATTCCAAAACTCTTGGAAACCC...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACACCACAGAAGAAAGCTaGACAAGGATCTTCATATAC +
Preference number: 5 (lower is better)
Translates to: NKRSSINPEMQTALIFTYTTEES*TRIFIY
Trigger: GTATATGAAGATCCTTGTCAAGCTTTCTTCTGTGGT...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp AACAAGAGGTCTTCAATAAACCCAGAAATGCAGACAGCACTGATATTTACATACTTTAGCATGCTATTATaGTTTTCTGCTCCTAGGCAT +
Preference number: 5 (lower is better)
Translates to: NKRSSINPEMQTALIFTYFSMLL*FSAPRH
Trigger: ATGCCTAGGAGCAGAAAACAATAATAGCATGCTAAA...GTATGTAAATATCAGTGCTGTCTGCATTTCTGGGTTTATTGAAGACCTCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATTCACTCTTTAGTCTCTaGGTAAGCTTGTTTACAAGT +
Preference number: 5 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNSLFSL*VSLFTS
Trigger: ACTTGTAAACAAGCTTACCAAGAGACTAAAGAGTGA...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS-3UTR CAA 90 bp GATGTAAAAATCCTACATAGTCAGACAACCTGCTTTGGCTATATCATCAGAAATATAGAGCTTGCTGACTaGAACAAAACATGTCAACAT +
Preference number: 5 (lower is better)
Translates to: DVKILHSQTTCFGYIIRNIELAD*NKTCQH
Trigger: ATGTTGACATGTTTTGTTCAAGTCAGCAAGCTCTAT...ATTTCTGATGATATAGCCAAAGCAGGTTGTCTGACTATGTAGGATTTTTACATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CCA 72 bp GTAGAAGTCCACGTCATTGGTACAAAACTCAGGCACTaGGGTCAGGGGAGGTCCTCCGCCTTTGTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: VEVHVIGTKLRH*GQGRSSAFVPD
Trigger: ATCTGGGACAAAGGCGGAGGACCTCCCCTGACCCCAGTGCCTGAGTTTTGTACCAATGACGTGGACTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343307.5
ENST00000461652.2
CDS GCA 72 bp CTGTGTCTCCTGCCTGGCTTTGTCTTCGTCACTGGGTaGCAACCATGTGAAATACACCTTCACTGGATCGAT +
Preference number: 6 (lower is better)
Translates to: LCLLPGFVFVTG*QPCEIHLHWID
Trigger: ATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGACGAAGACAAAGCCAGGCAGGAGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CAA 90 bp CTTCACTGGATCGATGTTCCAGTGTTTGTGGAACGATATGGGAACTaGATGAGAAAGGTAGTCCTTAGGGTAATCCACCGGCCGAGCCTG +
Preference number: 6 (lower is better)
Translates to: LHWIDVPVFVERYGN*MRKVVLRVIHRPSL
Trigger: CAGGCTCGGCCGGTGGATTACCCTAAGGACTACCTTTCTCATCAAGTTCCCATATCGTTCCACAAACACTGGAACATCGATCCAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS TCA 72 bp GCCTGGCTTTGTCTTCGTCACTGGGTGCCAACCATGTaGAATACACCTTCACTGGATCGATGTTCCAGTGTT +
Preference number: 6 (lower is better)
Translates to: AWLCLRHWVPTM*NTPSLDRCSSV
Trigger: AACACTGGAACATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGACGAAGACAAAGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS GCA 72 bp AGCACATTCCCAGGACCATATCATCGGGAGCATCATTaGTGTAGCATCGACATTTACTGGCGAGAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: STFPGPYHREHH*CSIDIYWREVS
Trigger: GGAGACTTCTCGCCAGTAAATGTCGATGCTACAGCAATGATGCTCCCGATGATATGGTCCTGGGAATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS GCA 72 bp AGTCTGCTTAACAATAGGTACCCAGAAAGGGCTCCCTaGAGCTTGCAGCCACTAAAAGTTCACACTGTTGGG +
Preference number: 6 (lower is better)
Translates to: SLLNNRYPERAP*SLQPLKVHTVG
Trigger: CCCAACAGTGTGAACTTTTAGTGGCTGCAAGCTGCAGGGAGCCCTTTCTGGGTACCTATTGTTAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461652.2
CDS CCA 72 bp GTCACTGGGTGCCAACCATGTGAAATACACCTTCACTaGATCGATGTTCCAGTGTTTGTGGAACGATATGGG +
Preference number: 6 (lower is better)
Translates to: VTGCQPCEIHLH*IDVPVFVERYG
Trigger: CCCATATCGTTCCACAAACACTGGAACATCGATCCAGTGAAGGTGTATTTCACATGGTTGGCACCCAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CAA 90 bp AACTTTCCTCAGTCCCCAGCAAGGGTCCTGCAGGCTGTGCAAATTTaGCTTTCAATTTCCTCAGCCTTTAGGCTTTCAGTCCTTTTTCGC +
Preference number: 6 (lower is better)
Translates to: NFPQSPARVLQAVQI*LSISSAFRLSVLFR
Trigger: GCGAAAAAGGACTGAAAGCCTAAAGGCTGAGGAAATTGAAAGCAAAATTTGCACAGCCTGCAGGACCCTTGCTGGGGACTGAGGAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461652.2
CDS CAA 72 bp ATCGATGTTCCAGTGTTTGTGGAACGATATGGGAACTaGATGAGAAAGGTAGTCCTTAGGGTAATCCACCGG +
Preference number: 6 (lower is better)
Translates to: IDVPVFVERYGN*MRKVVLRVIHR
Trigger: CCGGTGGATTACCCTAAGGACTACCTTTCTCATCAAGTTCCCATATCGTTCCACAAACACTGGAACATCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS TCA 72 bp GCCTGGAGATACTTATTAATGTATCATCATCCACAATaGCTAACCATGCTGTTTTGTCCTGGCTACGATTCA +
Preference number: 6 (lower is better)
Translates to: AWRYLLMYHHPQ*LTMLFCPGYDS
Trigger: TGAATCGTAGCCAGGACAAAACAGCATGGTTAGTCATTGTGGATGATGATACATTAATAAGTATCTCCAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS GCA 72 bp ATTTTCAGTATAGTCACTATAGTATTCAATGAGACTTaGCTGGCTCTCCCAAGTCTGCTTAACAATAGGTAC +
Preference number: 6 (lower is better)
Translates to: IFSIVTIVFNET*LALPSLLNNRY
Trigger: GTACCTATTGTTAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTGACTATACTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461652.2
CDS GCA 72 bp ATTTTCAGTATAGTCACTATAGTATTCAATGAGACTTaGCTGGCTCTCCCAAGTCTGCTTAACAATAGGTAT +
Preference number: 6 (lower is better)
Translates to: IFSIVTIVFNET*LALPSLLNNRY
Trigger: ATACCTATTGTTAAGCAGACTTGGGAGAGCCAGGCAAGTCTCATTGAATACTATAGTGACTATACTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CAA 72 bp AATGTATCATCATCCACAATGACTAACCATGCTGTTTaGTCCTGGCTACGATTCAGAAATCTTTCCAAAATG +
Preference number: 6 (lower is better)
Translates to: NVSSSTMTNHAV*SWLRFRNLSKM
Trigger: CATTTTGGAAAGATTTCTGAATCGTAGCCAGGACAAAACAGCATGGTTAGTCATTGTGGATGATGATACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5
CDS CAA 90 bp ATACTTATTAATGTATCATCATCCACAATGACTAACCATGCTGTTTaGTCCTGGCTACGATTCAGAAATCTTTCCAAAATGGCAAATGTC +
Preference number: 6 (lower is better)
Translates to: ILINVSSSTMTNHAV*SWLRFRNLSKMANV
Trigger: GACATTTGCCATTTTGGAAAGATTTCTGAATCGTAGCCAGGACAAAACAGCATGGTTAGTCATTGTGGATGATGATACATTAATAAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343307.5