RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112309

Ensembl transcript IDs: ENST00000230053.11, ENST00000615536.1

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATaGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGC +
Preference number: 1 (lower is better)
Translates to: FLRTLLAPKEEWWDK*VHPRVSLACRKLSS
Trigger: GCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp ACCCCTACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGATaGTCTGGAAGCTCATCAGGTCAGACTCTCAGCACACAACTGTGG +
Preference number: 1 (lower is better)
Translates to: TPTAGFGQPSSTTAG*SGSSSGQTLSTQLW
Trigger: CCACAGTTGTGTGCTGAGAGTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 90 bp ACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTaGAGCTCCTGGCCTTATAGGAAATGTGATGGGACAGAGTCCAAG +
Preference number: 1 (lower is better)
Translates to: TSCISGLSIDGRACA*SSWPYRKCDGTESK
Trigger: CTTGGACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp GGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGG +
Preference number: 1 (lower is better)
Translates to: GGHAHAQWVYGKCTN*CDATSSERCWPPRR
Trigger: CCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 90 bp GCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTaGTGCCACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGG +
Preference number: 1 (lower is better)
Translates to: ACPCPMGLWEMHKLV*CHFLRTLLAPKEEW
Trigger: CCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp TACTGCAGGTTTTGGCCAGCCCTCCAGCACAACAGCAGGATGGTCTaGAAGCTCATCAGGTCAGACTCTCAGCACACAACTGTGGAAATG +
Preference number: 1 (lower is better)
Translates to: YCRFWPALQHNSRMV*KLIRSDSQHTTVEM
Trigger: CATTTCCACAGTTGTGTGCTGAGAGTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCTGGAGGGCTGGCCAAAACCTGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp ATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTaGCCTTATAGGAAATGTGATGGGACAGAGTCCAAGCATGATGGT +
Preference number: 1 (lower is better)
Translates to: ISGLSIDGRACACSS*PYRKCDGTESKHDG
Trigger: ACCATCATGCTTGGACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 90 bp AAGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATaGACAAACTGGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC +
Preference number: 1 (lower is better)
Translates to: KHDGGHAHAQWVYGK*TNWCDATSSERCWP
Trigger: GGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp GATGGGACAGAGTCCAAGCATGATGGTGGGCATGCCCATGCCCAATaGGTTTATGGGAAATGCACAAACTGGTGTGATGCCACTTCCTCA +
Preference number: 1 (lower is better)
Translates to: DGTESKHDGGHAHAQ*VYGKCTNWCDATSS
Trigger: TGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCTTGGACTCTGTCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 90 bp ATTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCAGCTaGATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: IYGTHKYTIYLTSTS*ISGLSIDGRACACS
Trigger: GCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTGCTTGTGAGGTAAATGGTATATTTGTGGGTCCCATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp CAGAAGGGTGATGCTGTTCTCCAGCACTCCATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTAAAATGTCCTTTAGTAGGTATGAAG +
Preference number: 1 (lower is better)
Translates to: QKGDAVLQHSISAIY*PMTRWLKCPLVGMK
Trigger: CTTCATACCTACTAAAGGACATTTTAACCACCTTGTCATTGGCCAGTAGATTGCACTGATGGAGTGCTGGAGAACAGCATCACCCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 90 bp TCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTaGTGGTGGGACATTTTTACAGTCCACTTAGACAACTTAGCTTCA +
Preference number: 1 (lower is better)
Translates to: SLSVTSEISTKLYPA*WWDIFTVHLDNLAS
Trigger: TGAAGCTAAGTTGTCTAAGTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 90 bp TGTAACGTGAACACCACTAATGGCCAGAAATTATCTCAGGCATCATaGGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTAT +
Preference number: 1 (lower is better)
Translates to: CNVNTTNGQKLSQAS*DSLSVTSEISTKLY
Trigger: ATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTCATGATGCCTGAGATAATTTCTGGCCATTAGTGGTGTTCACGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp CTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTCCACTTAGACAACTTAGCTTCACTA +
Preference number: 1 (lower is better)
Translates to: LSVTSEISTKLYPAC*WDIFTVHLDNLASL
Trigger: TAGTGAAGCTAAGTTGTCTAAGTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp AGATATAGTCAGCTCTCACTTCCCTGTTTCGTACTGGGGGACCAGTaGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATA +
Preference number: 1 (lower is better)
Translates to: RYSQLSLPCFVLGDQ*YKSAIKQCMMSCYI
Trigger: TATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGGTCCCCCAGTACGAAACAGGGAAGTGAGAGCTGACTATATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp TCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGGTaGGACATTTTTACAGTCCACTTAGACAACTTAGCTTCACTAATA +
Preference number: 1 (lower is better)
Translates to: SVTSEISTKLYPACW*DIFTVHLDNLASLI
Trigger: TATTAGTGAAGCTAAGTTGTCTAAGTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 90 bp GTGCAACTACACGTGATAGCTCTGTCTTCATTCATTTTCTTTTTGTaGTGCAGGTGTATTTATGGGACCCACAAATATACCATTTACCTC +
Preference number: 1 (lower is better)
Translates to: VQLHVIALSSFIFFL*CRCIYGTHKYTIYL
Trigger: GAGGTAAATGGTATATTTGTGGGTCCCATAAATACACCTGCACCACAAAAAGAAAATGAATGAAGACAGAGCTATCACGTGTAGTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 90 bp GACAAGGTGGTTAAAATGTCCTTTAGTAGGTATGAAGACGTGATCTaGTTCTTCAGACACTTATGCCTGATTAGTGATGTAGTTTATGTT +
Preference number: 1 (lower is better)
Translates to: DKVVKMSFSRYEDVI*FFRHLCLISDVVYV
Trigger: AACATAAACTACATCACTAATCAGGCATAAGTGTCTGAAGAAGCAGATCACGTCTTCATACCTACTAAAGGACATTTTAACCACCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCCCAAGGAGGAATGGTaGGACAAATGGGTGCACCCC +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLPKEEW*DKWVHP
Trigger: GGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATCCATATGGATCCACTaGCTGGACAAACTGCACCAG +
Preference number: 2 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGSIWIH*LDKLHQ
Trigger: CTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCCTGACATTCCTTGCTaGAACGCATCTAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLPDIPC*NASSSP
Trigger: AGGGGAACTAGATGCGTTTCAGCAAGGAATGTCAGG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTCCAGAACTACCACCTaGCATTCCTTGCTGAAACGC +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLSRTTT*HSLLKR
Trigger: GCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTATGGATCCACTGGCTaGACAAACTGCACCAGTTGC +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLYGSTG*TNCTSC
Trigger: GCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCATGCCCATGCCCAATaGGTTTATGGGAAATGCACA +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLHAHAQ*VYGKCT
Trigger: TGTGCATTTCCCATAAACCCATTGGGCATGGGCATG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAATTCCCATAAGGTGTaGACCAGACATCCCCTCATA +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLNSHKV*TRHPLI
Trigger: TATGAGGGGATGTCTGGTTCACACCTTATGGGAATT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTCAAGAGTGGTATCTTaGAGTATCGGCACTGTACAA +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLSRVVS*SIGTVQ
Trigger: TTGTACAGTGCCGATACTGCAAGATACCACTCTTGA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATGTACTGATTCAATTTaGTGTGGTGAAAAGCAGGTT +
Preference number: 2 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGCTDSI*CGEKQV
Trigger: AACCTGCTTTTCACCACATCAAATTGAATCAGTACA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAAGCTTTATCCAGCTTaGTGGTGGGACATTTTTACA +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLKLYPA*WWDIFT
Trigger: TGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGCATTTTGGCAATCTTaGTTTCTGTTTGGTCACTTG +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLAFWQS*FLFGHL
Trigger: CAAGTGACCAAACAGAAACCAAGATTGCCAAAATGC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGTTCCTCCAGCATTTTaGCAATCTTGGTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLVPPAF*QSWFLF
Trigger: AAACAGAAACCAAGATTGCCAAAATGCTGGAGGAAC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGGTTTTTATTTCCTATaGTGTATACTGCCACTAACC +
Preference number: 2 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLGFYFL*CILPLT
Trigger: GGTTAGTGGCAGTATACATCATAGGAAATAAAAACC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTAGCAGATGGCTGGCATaGGTATCAGTAGTGCAACCC +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTSRWLA*VSVVQP
Trigger: GGGTTGCACTACTGATACTCATGCCAGCCATCTGCT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTCCAGAACTACCACCTaGCATTCCTTGCTGAAACGC +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTSRTTT*HSLLKR
Trigger: GCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAAGAGTAAGTTTGGCCTaGCGCAAGCTCAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLRVSLA*RKLSSP
Trigger: GGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTCCATATGGATCCACTaGCTGGACAAACTGCACCAG +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTSIWIH*LDKLHQ
Trigger: CTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGTAGGTATGAAGACGTaGTCTGCTTCTTCAGACACT +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTVGMKT*SASSDT
Trigger: AGTGTCTGAAGAAGCAGATCACGTCTTCATACCTAC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTATTTTTCAGGTCGGATaGTTACTGCCCCATGGCTCT +
Preference number: 2 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAIFQVG*LLPHGS
Trigger: AGAGCCATGGGGCAGTAATCATCCGACCTGAAAAAT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTAATGTAACTGTAACGTaGACACCACTAATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTNVTVT*TPLMAR
Trigger: TCTGGCCATTAGTGGTGTTCACGTTACAGTTACATT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATATGGATCCACTGGCTaGACAAACTGCACCAGTTGC +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLYGSTG*TNCTSC
Trigger: GCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAACAGCAGGATGGTCTaGAAGCTCATCAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQNSRMV*KLIRSD
Trigger: GTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAGCACAACAGCAGGATaGTCTGGAAGCTCATCAGGT +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQSTTAG*SGSSSG
Trigger: ACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTISAIY*PMTRWL
Trigger: TAACCACCTTGTCATTGGCCAGTAGATTGCACTGAT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGCTCAGCAGCCCCAGTaGAGCCTCTCACAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIAQQPQ*SLSQVG
Trigger: CCCTACCTGTGAGAGGCTCCACTGGGGCTGCTGAGC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CAA 90 bp CATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATaGAAGCGAGATATAGTCAGCTCTCACTTCCCTGTTTCGTACTGG +
Preference number: 2 (lower is better)
Translates to: HFTCELKLLGSPLHL*KRDIVSSHFPVSYW
Trigger: CCAGTACGAAACAGGGAAGTGAGAGCTGACTATATCTCGCTTCAATAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTCAAGAGTGGTATCTTaGAGTATCGGCACTGTACAA +
Preference number: 2 (lower is better)
Translates to: ETPSLSPLRLALSFIQLASRVVS*SIGTVQ
Trigger: TTGTACAGTGCCGATACTGCAAGATACCACTCTTGA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAGAGTAAGTTTGGCCTaGCGCAAGCTCAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLRVSLA*RKLSSP
Trigger: GGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTATATTAAGAATGATCTaGTTGACCGTGTTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTILRMI*LTVLVC
Trigger: ACAGACCAACACGGTCAATCAGATCATTCTTAATAT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCCTGACATTCCTTGCTaGAACGCATCTAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWPDIPC*NASSSP
Trigger: AGGGGAACTAGATGCGTTTCAGCAAGGAATGTCAGG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGTAGGTATGAAGACGTaGTCTGCTTCTTCAGACACT +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQVGMKT*SASSDT
Trigger: AGTGTCTGAAGAAGCAGATCACGTCTTCATACCTAC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGGATAATGCAGAAGGGTaGTGCTGTTCTCCAGCACTC +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWDNAEG*CCSPAL
Trigger: GAGTGCTGGAGAACAGCATCACCCTTCTGCATTATC...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAAATTCCCATAAGGTGTaGACCAGACATCCCCTCATA +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLNSHKV*TRHPLI
Trigger: TATGAGGGGATGTCTGGTTCACACCTTATGGGAATT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGCTGTTGTTATGATGTaGTTAACAGGGAACGTGATT +
Preference number: 2 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAAVVMM*LTGNVI
Trigger: AATCACGTTCCCTGTTAAGCACATCATAACAACAGC...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCCAGCACTCCATCAGTaGAATCTACTGGCCAATGAC +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWPALHQ*NLLAND
Trigger: GTCATTGGCCAGTAGATTGCACTGATGGAGTGCTGG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTCATTTCTATTTCAGGTaGTGTGTTCTGACTTTTCTC +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTHFYFR*CVLTFL
Trigger: GAGAAAAGTCAGAACACAGCACCTGAAATAGAAATG...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATGGGTTTATGGGAAATaGACAAACTGGTGTGATGCC +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLWVYGK*TNWCDA
Trigger: GGCATCACACCAGTTTGTGCATTTCCCATAAACCCA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGAACAGCAGGATGGTCTaGAAGCTCATCAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWNSRMV*KLIRSD
Trigger: GTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCAGATGTCCATCAGATaGCAAGAAAGGCTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWQMSIR*QERLLY
Trigger: GTACAGCAGCCTTTCTTGTCATCTGATGGACATCTG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAGGTGTGGGTTGGTCTaGGTAGTAGGAGCAGCCAAA +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLRCGLV*VVGAAK
Trigger: TTTGGCTGCTCCTACTACTCAGACCAACCCACACCT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTCTATATGGTAAATCTTaGCTTTCCTTCTCTTATCAC +
Preference number: 2 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTLYGKS*LSFSYH
Trigger: GTGATAAGAGAAGGAAAGGCAAGATTTACCATATAG...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQISAIY*PMTRWL
Trigger: TAACCACCTTGTCATTGGCCAGTAGATTGCACTGAT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATACAGATGTCCATCAGATaGCAAGAAAGGCTGCTGTAC +
Preference number: 2 (lower is better)
Translates to: CAVVMMCLTGNVISERKIQMSIR*QERLLY
Trigger: GTACAGCAGCCTTTCTTGTCATCTGATGGACATCTG...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATTTTACACTTCCCATTaGTGTTCCTCCAGCATTTTG +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLFYTSH*CSSSIL
Trigger: CAAAATGCTGGAGGAACATCAATGGGAAGTGTAAAA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAGAAGCTGCTCAACTTaGAAAATCAGTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQRSCST*KISFPL
Trigger: GAGAGGAAAACTGATTTTGCAAGTTGAGCAGCTTCT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTTCTTCAGACACTTATaGCTGATTAGTGATGTAGTT +
Preference number: 2 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAFFRHL*LISDVV
Trigger: AACTACATCACTAATCAGGCATAAGTGTCTGAAGAA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATATGAAGACGTGATCTaGTTCTTCAGACACTTATGC +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLYEDVI*FFRHLC
Trigger: GCATAAGTGTCTGAAGAAGCAGATCACGTCTTCATA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGTTCCTCCAGCATTTTaGCAATCTTGGTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLVPPAF*QSWFLF
Trigger: AAACAGAAACCAAGATTGCCAAAATGCTGGAGGAAC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAAAACAAACAATACCTaGATGCTCTGTAGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQKTNNT*MLCSLN
Trigger: GTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATCAGGAACGTTTAGCTaGCAAAATACTTGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLSGTFS*QNTCLF
Trigger: AAACAGACAAGTATTTTGTCAGCTAAACGTTCCTGA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGATATTAAGAATGATCTaGTTGACCGTGTTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQILRMI*LTVLVC
Trigger: ACAGACCAACACGGTCAATCAGATCATTCTTAATAT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGGGAATAGTCTAGAGTaGTTTCTAACATTAGCACAA +
Preference number: 2 (lower is better)
Translates to: NELHFTCELKLLGSPLHLGNSLE*FLTLAQ
Trigger: TTGTGCTAATGTTAGAAATCACTCTAGACTATTCCC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAAT +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLTGWTN*TSCCFN
Trigger: ATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGCACAACAGCAGGATaGTCTGGAAGCTCATCAGGT +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDISTTAG*SGSSSG
Trigger: ACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLGKCTN*CDATSS
Trigger: TGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGATGTACTGCATTATTTaGGAAGCTGCTCAACTTGCA +
Preference number: 2 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWMYCII*EAAQLA
Trigger: TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACAT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAAT +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDITGWTN*TSCCFN
Trigger: ATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAAGAAGCTGCTCAACTTaGAAAATCAGTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLRSCST*KISFPL
Trigger: GAGAGGAAAACTGATTTTGCAAGTTGAGCAGCTTCT...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTGGGTTTATGGGAAATaGACAAACTGGTGTGATGCC +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLWVYGK*TNWCDA
Trigger: GGCATCACACCAGTTTGTGCATTTCCCATAAACCCA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGACATCCTCTTCCATATaGATCCACTGGCTGGACAAA +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLTSSSI*IHWLDK
Trigger: TTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIGKCTN*CDATSS
Trigger: TGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATACATAGTGCTAACATaGAGACCTTTTTCTGCACTA +
Preference number: 2 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLYIVLT*RPFSAL
Trigger: TAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTC +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLLYPAC*WDIFTV
Trigger: GACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAG...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAAAAACAAACAATACCTaGATGCTCTGTAGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: CAVVMMCLTGNVISERKIKTNNT*MLCSLN
Trigger: GTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTACATTATTTGAGAAGCTaGTCAACTTGCAAAATCAGT +
Preference number: 2 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLHYLRS*STCKIS
Trigger: ACTGATTTTGCAAGTTGAGCAGCTTCTCAAATAATG...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTATGAAGACGTGATCTaGTTCTTCAGACACTTATGC +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLYEDVI*FFRHLC
Trigger: GCATAAGTGTCTGAAGAAGCAGATCACGTCTTCATA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGCATTTTGGCAATCTTaGTTTCTGTTTGGTCACTTG +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLAFWQS*FLFGHL
Trigger: CAAGTGACCAAACAGAAACCAAGATTGCCAAAATGC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTC +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDILYPAC*WDIFTV
Trigger: GACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTGTACTGATTCAATTTaGTGTGGTGAAAAGCAGGTT +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLCTDSI*CGEKQV
Trigger: AACCTGCTTTTCACCACATCAAATTGAATCAGTACA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGTGCAGGTGTATTTATaGGACCCACAAATATACCAT +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIVQVYL*DPQIYH
Trigger: ATGGTATATTTGTGGGTCCCATAAATACACCTGCAC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGGTTTTTATTTCCTATaGTGTATACTGCCACTAACC +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIGFYFL*CILPLT
Trigger: GGTTAGTGGCAGTATACATCATAGGAAATAAAAACC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTACATAGTGCTAACATaGAGACCTTTTTCTGCACTA +
Preference number: 2 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIYIVLT*RPFSAL
Trigger: TAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTTCTTCAGACACTTATaGCTGATTAGTGATGTAGTT +
Preference number: 2 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLFFRHL*LISDVV
Trigger: AACTACATCACTAATCAGGCATAAGTGTCTGAAGAA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp ACGTTGTTGGCCCCCAAGGAGGAATGGTGGGACAAATaGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAG +
Preference number: 3 (lower is better)
Translates to: TLLAPKEEWWDK*VHPRVSLACRK
Trigger: CTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGCCAACAACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTCAAGAGTGGTATCTaGCAGTATCGGCACTGTACA +
Preference number: 3 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLLKSGI*QYRHCT
Trigger: TGTACAGTGCCGATACTGCAAGATACCACTCTTGAG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp TTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATGGTaGGACAAATGGGTGCACCCCAGAGTAAGTTTGGCC +
Preference number: 3 (lower is better)
Translates to: FLRTLLAPKEEW*DKWVHPRVSLA
Trigger: GGCCAAACTTACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp CTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTaGCCTTATAGGAAATGTGATGGGACAGAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: LSIDGRACACSS*PYRKCDGTESK
Trigger: CTTGGACTCTGTCCCATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCCATCGATGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAAATATAGGTAAAACATaGGTCTCTACCCGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGNIGKT*VSTRWE
Trigger: TTCCCAGCGGGTAGAGACCAATGTTTTACCTATATT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp ATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTaGAGCTCCTGGCCTTATAGGAAATGTGATGGGACA +
Preference number: 3 (lower is better)
Translates to: ISGLSIDGRACA*SSWPYRKCDGT
Trigger: TGTCCCATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp GTGTTTGTCTCAGGGGACACCCTCTGCACCAGCAGCTaGAACCCTGTCTACAGTAACATCTGGGGATCTAGA +
Preference number: 3 (lower is better)
Translates to: VFVSGDTLCTSS*NPVYSNIWGSR
Trigger: TCTAGATCCCCAGATGTTACTGTAGACAGGGTTGCAGCTGCTGGTGCAGAGGGTGTCCCCTGAGACAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
3UTR CCA 72 bp AGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTaGAGCCTCTCACAGGTAGGGGTCATTTACTTTCTA +
Preference number: 3 (lower is better)
Translates to: SKFGLPQAQQPQ*SLSQVGVIYFL
Trigger: TAGAAAGTAAATGACCCCTACCTGTGAGAGGCTCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp CACTTCCTCAGAACGTTGTTGGCCCCCAAGGAGGAATaGTGGGACAAATGGGTGCACCCCAGAGTAAGTTTG +
Preference number: 3 (lower is better)
Translates to: HFLRTLLAPKEE*WDKWVHPRVSL
Trigger: CAAACTTACTCTGGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTGTTCCTCCAGCATTTaGGCAATCTTGGTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLCSSSI*AILVSV
Trigger: AACAGAAACCAAGATTGCCAAAATGCTGGAGGAACA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp GCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCAGAACGTTGTTGGCCC +
Preference number: 3 (lower is better)
Translates to: AHAQWVYGKCTN*CDATSSERCWP
Trigger: GGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp GAGTCCAAGCATGATGGTGGGCATGCCCATGCCCAATaGGTTTATGGGAAATGCACAAACTGGTGTGATGCC +
Preference number: 3 (lower is better)
Translates to: ESKHDGGHAHAQ*VYGKCTNWCDA
Trigger: GGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCTTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATGCCTCTCTTGTAATTaGGATCTCTTCTTAATGTAC +
Preference number: 3 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGCLSCN*DLFLMY
Trigger: GTACATTAAGAAGAGATCCAAATTACAAGAGAGGCA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTACCCCTACTGCAGGTTTaGGCCAGCCCTCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: NELHFTCELKLLGSPLHLPLLQV*ASPPAQ
Trigger: TTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGG...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 72 bp TGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGTaGTGCCACTTCCTCAGAACGTTGTTGGCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: CPMGLWEMHKLV*CHFLRTLLAPK
Trigger: CTTGGGGGCCAACAACGTTCTGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCCATAAACCCATTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCTCAAGAGTGGTATCTaGCAGTATCGGCACTGTACA +
Preference number: 3 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLKSGI*QYRHCT
Trigger: TGTACAGTGCCGATACTGCAAGATACCACTCTTGAG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCCCCTACTGCAGGTTTaGGCCAGCCCTCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIPLLQV*ASPPAQ
Trigger: TTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 72 bp AACACCACTAATGGCCAGAAATTATCTCAGGCATCATaGGACTCCCTCTCTGTCACCTCTGAGATTAGCACT +
Preference number: 3 (lower is better)
Translates to: NTTNGQKLSQAS*DSLSVTSEIST
Trigger: AGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTCATGATGCCTGAGATAATTTCTGGCCATTAGTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 72 bp AACAACCAGCTCTCAGGGTTTAGGTGTGGGTTGGTCTaGGTAGTAGGAGCAGCCAAACTGGAATTAAAATGT +
Preference number: 3 (lower is better)
Translates to: NNQLSGFRCGLV*VVGAAKLELKC
Trigger: ACATTTTAATTCCAGTTTGGCTGCTCCTACTACTCAGACCAACCCACACCTAAACCCTGAGAGCTGGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp CAGCTCTCACTTCCCTGTTTCGTACTGGGGGACCAGTaGTACAAATCAGCAATAAAACAGTGTATGATGTCA +
Preference number: 3 (lower is better)
Translates to: QLSLPCFVLGDQ*YKSAIKQCMMS
Trigger: TGACATCATACACTGTTTTATTGCTGATTTGTACCACTGGTCCCCCAGTACGAAACAGGGAAGTGAGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTTCCTCAGAACGTTGTaGGCCCCCAAGGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLFLRTL*APKEEW
Trigger: CCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGCACTTCCTCAGAACGTaGTTGGCCCCCAAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLHFLRT*LAPKEE
Trigger: TTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTG...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp GTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTaGTGGTGGGACATTTTTACAGTCCACTTAGACAAC +
Preference number: 3 (lower is better)
Translates to: VTSEISTKLYPA*WWDIFTVHLDN
Trigger: GTTGTCTAAGTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp GATGCTGTTCTCCAGCACTCCATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTAAAATGTCCTTTAGTA +
Preference number: 3 (lower is better)
Translates to: DAVLQHSISAIY*PMTRWLKCPLV
Trigger: TACTAAAGGACATTTTAACCACCTTGTCATTGGCCAGTAGATTGCACTGATGGAGTGCTGGAGAACAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGATGTCAAGGGCAGCTTaGCTCATATTTCCCATGATT +
Preference number: 3 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQMSRAA*LIFPMI
Trigger: AATCATGGGAAATATGAGCAAAGCTGCCCTTGACAT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCACTTCCTCAGAACGTaGTTGGCCCCCAAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIHFLRT*LAPKEE
Trigger: TTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp ACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTCCACTTAGACAACTTA +
Preference number: 3 (lower is better)
Translates to: TSEISTKLYPAC*WDIFTVHLDNL
Trigger: TAAGTTGTCTAAGTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCTCTTATCACCAATTTaGGAAGTAAGAGAATCACAG +
Preference number: 3 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLLSPI*EVRESQ
Trigger: CTGTGATTCTCTTACTTCCAAAATTGGTGATAAGAG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATGCCTCTCTTGTAATTaGGATCTCTTCTTAATGTAC +
Preference number: 3 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLCLSCN*DLFLMY
Trigger: GTACATTAAGAAGAGATCCAAATTACAAGAGAGGCA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGATGTCAAGGGCAGCTTaGCTCATATTTCCCATGATT +
Preference number: 3 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLMSRAA*LIFPMI
Trigger: AATCATGGGAAATATGAGCAAAGCTGCCCTTGACAT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCATGTACTGCATTATTaGAGAAGCTGCTCAACTTGC +
Preference number: 3 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIHVLHY*RSCSTC
Trigger: GCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp TTTCATCATTCACTTCACTGTGCTGTTGTTATGATGTaGTTAACAGGGAACGTGATTAGTGAAAGGAAGATA +
Preference number: 3 (lower is better)
Translates to: FHHSLHCAVVMM*LTGNVISERKI
Trigger: TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACAGTGAAGTGAATGATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp GTTAAAATGTCCTTTAGTAGGTATGAAGACGTGATCTaGTTCTTCAGACACTTATGCCTGATTAGTGATGTA +
Preference number: 3 (lower is better)
Translates to: VKMSFSRYEDVI*FFRHLCLISDV
Trigger: TACATCACTAATCAGGCATAAGTGTCTGAAGAAGCAGATCACGTCTTCATACCTACTAAAGGACATTTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCTCTTATCACCAATTTaGGAAGTAAGAGAATCACAG +
Preference number: 3 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDILLSPI*EVRESQ
Trigger: CTGTGATTCTCTTACTTCCAAAATTGGTGATAAGAG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 72 bp GTAGGAGCAGCCAAACTGGAATTAAAATGTTTGCTGTaGGTAGTTCAGAAAGGCAATTTTTCTGTGATTATA +
Preference number: 3 (lower is better)
Translates to: VGAAKLELKCLL*VVQKGNFSVII
Trigger: TATAATCACAGAAAAATTGCCTTTCTGAACTACTCACAGCAAACATTTTAATTCCAGTTTGGCTGCTCCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CCA 72 bp TGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTaGAAGATATTTTGTGTGGCTGTTGCATATGATTTA +
Preference number: 3 (lower is better)
Translates to: CMMSCYIVWSSQ*KIFCVAVAYDL
Trigger: TAAATCATATGCAACAGCCACACAAAATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR TCA 72 bp AATTTGGATCTCTTCTTAATGTACATAGTGCTAACATaGAGACCTTTTTCTGCACTATATGCAAACAGGGTA +
Preference number: 3 (lower is better)
Translates to: NLDLFLMYIVLT*RPFSALYANRV
Trigger: TACCCTGTTTGCATATAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTACATTAAGAAGAGATCCAAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR GCA 72 bp TGGTACAAATCAGCAATAAAACAGTGTATGATGTCATaGTACATAGTTTGGTCTTCACAGTGGAAGATATTT +
Preference number: 3 (lower is better)
Translates to: WYKSAIKQCMMS*YIVWSSQWKIF
Trigger: AAATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGCGCGCTGGTGCTGGTaGCTCTGGCGCAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGARWCW*LWRSQA
Trigger: CGCCTGGCTGCGCCAGAGGCACCAGCACCAGCGCGC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACCAGTCCGGCGGTGCTaGGGGCACAAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGPVRRC*GHKGSS
Trigger: GCTGGAGCCCTTGTGCCCGCAGCACCGCCGGACTGG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGGCGGGCGGCGGCGCTaGGGGCTTTCCTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGGGRRR*GLSFLT
Trigger: TGTGAGGAAGGAAAGCCCCCAGCGCCGCCGCCCGCC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGGCTCCGGCTGTGGCTaGGGCCGAGACTGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLGSGCG*GRDWLR
Trigger: GCGCAACCAGTCTCGGCCGCAGCCACAGCCGGAGCC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGCGGCCGAGACTGGTTaGGCTTTTGGGTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGAAETG*AFGSRE
Trigger: CTCACGGGACCCAAAAGCGCAACCAGTCTCGGCCGC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAATGGTGCACGCTCCCTaGCCTCTCGGACACCCCAGA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGMVHAP*PLGHPR
Trigger: TCTGGGGTGTCCGAGAGGCCAGGGAGCGTGCACCAT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGCTCAGCAGCCCCAGTaGAGCCTCTCACAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGAQQPQ*SLSQVG
Trigger: CCCTACCTGTGAGAGGCTCCACTGGGGCTGCTGAGC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGCCGCAGCGGAAGCCTaGTCTCAGTCCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGAAAEA*SQSLAL
Trigger: AAGAGCAAGGGACTGAGAGCAGGCTTCCGCTGCGGC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAGGATCCAGTGCAGCTaGGCCACCTGGCGGAACGTG +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLRIQCS*ATWRNV
Trigger: CACGTTCCGCCAGGTGGCGCAGCTGCACTGGATCCT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCGGAGACCTTGCGGGTaGTTCGCATCAGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLRRPCG*FASARC
Trigger: GCAGCGAGCTGATGCGAACCACCCGCAAGGTCTCCG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615536.1
CDS-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGCACTTAGGGAGTGGTaGTGGGTGCGCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLALREW*WVRCPW
Trigger: CCATGGACAGCGCACCCATCACCACTCCCTAAGTGC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACCCAAGGAGGAATGGTaGGACAAATGGGTGCACCCC +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGPKEEW*DKWVHP
Trigger: GGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAGGGCTTTCCATCGATaGGCGTGCCTGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLRAFHR*ACLCLQ
Trigger: CTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGCACGTGCAGGTGAGTaGTGGGCAGCCCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTARAGE*WAARPA
Trigger: CGCGGGCCGGGCTGCCCAGCACTCACCTGCACGTGC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGGGGCCGAGGGCGCTaGAGAGACCTGGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAWGRGR*RDLEPR
Trigger: CCGCGGCTCCAGGTCTCTGCAGCGCCCTCGGCCCCA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGCGGGGGCACTGGCCTaGGCGTGTCCACGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTAGALA*ACPRRA
Trigger: TGCTCGACGTGGACACGCGCAGGCCAGTGCCCCCGC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGTGAGCGGGGGCACTaGCCTGCGCGTGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTGERGH*PARVHV
Trigger: GACGTGGACACGCGCAGGCCAGTGCCCCCGCTCACC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATTCTCTGTCCGAGTGTaGCACACGAGAACCTTAGTG +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGFSVRV*HTRTLV
Trigger: CACTAAGGTTCTCGTGTGGCACACTCGGACAGAGAA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGCGCTGCAGAGACCTaGAGCCGCGGGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTGAAET*SRGAHY
Trigger: GTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGCC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGGTGCTGGTGCCTCTaGCGCAGCCAGGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAWCWCL*RSQARP
Trigger: GGGCCTCGCCTGGCTGCGCCAGAGGCACCAGCACCA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGTGCGGGAAAGGCGCTaGTCCCCACCGCGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTVRERR*SPPRSF
Trigger: GAAAGAGCGCGGTGGGGATCAGCGCCTTTCCCGCAC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAGGCGAGGCCCGCGTTaGGCTGCTCAGTGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQRRGPR*AAQWRA
Trigger: CGCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTTCTCTGTCCGAGTGTaGCACACGAGAACCTTAGTG +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLFSVRV*HTRTLV
Trigger: CACTAAGGTTCTCGTGTGGCACACTCGGACAGAGAA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCCAGCACTCCATCAGTaGAATCTACTGGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLPALHQ*NLLAND
Trigger: GTCATTGGCCAGTAGATTGCACTGATGGAGTGCTGG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTCGACTCCAGGTGAGCTaGCGGGAAGCGGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTRLQVS*REAGLG
Trigger: ACCGAGTCCCGCTTCCCGCCAGCTCACCTGGAGTCG...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGGGTGCGCTGTCCATaGGGCCGAGGGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAWVRCP*GRGRCR
Trigger: TCTGCAGCGCCCTCGGCCCCATGGACAGCGCACCCA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGCTGCGGCCGAGACTaGTTGCGCTTTTGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTGCGRD*LRFWVP
Trigger: CGGGACCCAAAAGCGCAACCAGTCTCGGCCGCAGCC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAGCACAACAGCAGGATaGTCTGGAAGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLSTTAG*SGSSSG
Trigger: ACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACATGCCCATGCCCAATaGGTTTATGGGAAATGCACA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGHAHAQ*VYGKCT
Trigger: TGTGCATTTCCCATAAACCCATTGGGCATGGGCATG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATTCCCTGTTTCGTACTaGGGGACCAGTGGTACAAAT +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGFPVSY*GTSGTN
Trigger: ATTTGTACCACTGGTCCCCCAGTACGAAACAGGGAA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGTAGGTATGAAGACGTaGTCTGCTTCTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGVGMKT*SASSDT
Trigger: AGTGTCTGAAGAAGCAGATCACGTCTTCATACCTAC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAAATTCCCATAAGGTGTaGACCAGACATCCCCTCATA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGNSHKV*TRHPLI
Trigger: TATGAGGGGATGTCTGGTTCACACCTTATGGGAATT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCATTTTTCAGGTCGGATaGTTACTGCCCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLIFQVG*LLPHGS
Trigger: AGAGCCATGGGGCAGTAATCATCCGACCTGAAAAAT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAGAAAGTCAGATTCTTaGATCCCTGGCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLRKSDS*IPGWDP
Trigger: TGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLTGWTN*TSCCFN
Trigger: ATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGGTGAGCGGGGGCACTaGCCTGCGCGTGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQGERGH*PARVHV
Trigger: GACGTGGACACGCGCAGGCCAGTGCCCCCGCTCACC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAAATGTAACTGTAACGTaGACACCACTAATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGNVTVT*TPLMAR
Trigger: TCTGGCCATTAGTGGTGTTCACGTTACAGTTACATT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGAGGCCCGCGTTGCGCTaGTCAGTGGCGCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWRPALR*SVARGS
Trigger: GCTGCCGCGCGCCACTGAGCAGCGCAACGCGGGCCT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATTCGCATCAGCTCGCTaGGCGCCGCCGCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLFASAR*APPRPP
Trigger: TGGAGGACGCGGCGGCGCGCAGCGAGCTGATGCGAA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTGTAGCGCCGCGGCGTaGGCACGTGCAGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQCSAAA*ARAGEC
Trigger: GCACTCACCTGCACGTGCCCACGCCGCGGCGCTACA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCACATCCTCTTCCATATaGATCCACTGGCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLTSSSI*IHWLDK
Trigger: TTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTGCCCAATGGGTTTATaGGAAATGCACAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLCPMGL*EMHKLV
Trigger: CACCAGTTTGTGCATTTCCCATAAACCCATTGGGCA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTCCACCGCGCTCTTTCTaGAGAGTGGAAGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTPPRSF*RVEAEK
Trigger: CTTCTCGGCTTCCACTCTTCAGAAAGAGCGCGGTGG...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGTGGGCACGTGCAGGTaGGTGCTGGGCAGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIVGTCR*VLGSPA
Trigger: GGCCGGGCTGCCCAGCACTCACCTGCACGTGCCCAC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGACAGAGTCCAAGCATaGTGGTGGGCATGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTDRVQA*WWACPC
Trigger: GCATGGGCATGCCCACCATCATGCTTGGACTCTGTC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGGGAGTGGTGATGGGTaGGCTGTCCATGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLGSGDG*AVHGAE
Trigger: CTCGGCCCCATGGACAGCGCACCCATCACCACTCCC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAGCCGAGGGACCCCAGTaGGCAGCTTGGACAGCGGCG +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLAEGPQ*AAWTAA
Trigger: CGCCGCTGTCCAAGCTGCGCACTGGGGTCCCTCGGC...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGCGCGGACTTCATGGTaGACGCTCCCTGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLARTSW*TLPGLS
Trigger: CGAGAGGCCAGGGAGCGTGCACCATGAAGTCCGCGC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCTCACTACCTGGGCGTaGAGGAGCGGCAGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLTTWA*RSGRFA
Trigger: CGCGAACCTGCCGCTCCTCCACGCCCAGGTAGTGAG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAGCGGGGCTCACTACCTaGGCGTGGAGGAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLAGLTT*AWRSGR
Trigger: CCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGC...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTGCAGCTGCGCCACCTaGCGGAACGTGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQCSCAT*RNVLAR
Trigger: CCTGGCCAACACGTTCCGCCAGGTGGCGCAGCTGCA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAAAAACAAACAATACCTaGATGCTCTGTAGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGKTNNT*MLCSLN
Trigger: GTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAGGTTTTTATTTCCTATaGTGTATACTGCCACTAACC +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGGFYFL*CILPLT
Trigger: GGTTAGTGGCAGTATACATCATAGGAAATAAAAACC...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATACATAGTGCTAACATaGAGACCTTTTTCTGCACTA +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGYIVLT*RPFSAL
Trigger: TAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGCAGGTAAACAGTCTTaGGTTACCACATGGATTAAA +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLAGKQS*VTTWIK
Trigger: TTTAATCCATGTGGTAACTCAAGACTGTTTACCTGC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTACCGGTCCCGGAGTTGTaGCGAGTGCGGGAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLPVPEL*RVRERR
Trigger: GCGCCTTTCCCGCACTCGGCACAACTCCGGGACCGG...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGCGGCCGAGACTGGTTaGGCTTTTGGGTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLAAETG*AFGSRE
Trigger: CTCACGGGACCCAAAAGCGCAACCAGTCTCGGCCGC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGGCTCCGGCTGTGGCTaGGGCCGAGACTGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIGSGCG*GRDWLR
Trigger: GCGCAACCAGTCTCGGCCGCAGCCACAGCCGGAGCC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAGGATCCAGTGCAGCTaGGCCACCTGGCGGAACGTG +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQRIQCS*ATWRNV
Trigger: CACGTTCCGCCAGGTGGCGCAGCTGCACTGGATCCT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGGCTCACCAGCTCGCTaGGCGCCGCCGCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLGSPAR*APPRPP
Trigger: TGGAGGACGCGGCGGCGCGCAGCGAGCTGGTGAGCC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGGCTGCGCGCGCTGGTaGTGGTGCCTCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLGCARW*WCLWRS
Trigger: GCTGCGCCAGAGGCACCAGCACCAGCGCGCGCAGCC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCTTAGTGCAGTTATTTaGTTTCGGTTCCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLLSAVI*FRFQFF
Trigger: GAAGAACTGGAACCGAAAGCAAATAACTGCACTAAG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGCTGTTGTTATGATGTaGTTAACAGGGAACGTGATT +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLAVVMM*LTGNVI
Trigger: AATCACGTTCCCTGTTAAGCACATCATAACAACAGC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAGAAGCTGCTCAACTTaGAAAATCAGTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLRSCST*KISFPL
Trigger: GAGAGGAAAACTGATTTTGCAAGTTGAGCAGCTTCT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGGGCGTGCCTGTGCCTaGAGCTCCTGGCCTTATAGG +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLGRACA*SSWPYR
Trigger: CCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGCTCTTTCTGAAGAGTaGAAGCCGAGAAGCGGCACC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTALSEE*KPRSGT
Trigger: GGTGCCGCTTCTCGGCTTCCACTCTTCAGAAAGAGC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATACCCCAGTGCGCAGCTTaGACAGCGGCGGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIPQCAA*TAAAPA
Trigger: TGCTGGCGCCGCCGCTGTCCAAGCTGCGCACTGGGG...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTCCCAAGGAGGAATGGTaGGACAAATGGGTGCACCCC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAPKEEW*DKWVHP
Trigger: GGGGTGCACCCATTTGTCCCACCATTCCTCCTTGGG...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGCCCCCAAGGAGGAATaGTGGGACAAATGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAAPKEE*WDKWVH
Trigger: GTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGC...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTTGGACAAAATGACTTaGAGACTTACAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLLDKMT*RLTANP
Trigger: AGGATTTGCTGTAAGTCTTCAAGTCATTTTGTCCAA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTAGGTGTGGGTTGGTCTaGGTAGTAGGAGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTRCGLV*VVGAAK
Trigger: TTTGGCTGCTCCTACTACTCAGACCAACCCACACCT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCCCTGGTAATGAATTTTaGTATCTGCTTTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLPGNEF*YLLSVT
Trigger: TGTCACTGAAAGCAGATATCAAAATTCATTACCAGG...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAGAAGCGGCACCCGGTaGGCCTCGCCGCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLRSGTR*ASPLQS
Trigger: GGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATCCACCAGGATCCAGTaGAGCTGCGCCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLSTRIQ*SCATWR
Trigger: CCGCCAGGTGGCGCAGCTGCACTGGATCCTGGTGGA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACTATATGGTAAATCTTaGCTTTCCTTCTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGLYGKS*LSFSYH
Trigger: GTGATAAGAGAAGGAAAGGCAAGATTTACCATATAG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAACATTCCCGCCGGGGTaGCGAGGAGCGGGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKITFPPG*RGAGGD
Trigger: GTCTCCACCCGCTCCTCGCCACCCCGGCGGGAATGT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAAAGCGCGGACTTCATaGTGCACGCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQKARTS*CTLPGL
Trigger: GAGGCCAGGGAGCGTGCACCATGAAGTCCGCGCTTT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATACCTGGCGGAACGTGTTaGCCAGGCGGGTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIPGGTC*PGGSAP
Trigger: CGGAGCTGACCCGCCTGGCCAACACGTTCCGCCAGG...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCTCATGCTACATAGTTTaGTCTTCACAGTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLSCYIV*SSQWKI
Trigger: TATCTTCCACTGTGAAGACCAAACTATGTAGCATGA...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTTATCTCAGGCATCATaGGACTCCCTCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTLSQAS*DSLSVT
Trigger: GGTGACAGAGAGGGAGTCTCATGATGCCTGAGATAA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGCTCCAGTCCGGCGGTaGTGCGGGCACAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIAPVRR*CGHKGS
Trigger: GGAGCCCTTGTGCCCGCAGCACCGCCGGACTGGAGC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGCGGGGGCACTGGCCTaGGCGTGTCCACGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIAGALA*ACPRRA
Trigger: TGCTCGACGTGGACACGCGCAGGCCAGTGCCCCCGC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTACCAGCCAACAACTTTaGCGTTTTCCACCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLATSQQL*RFPPAD
Trigger: GTCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAGGCAAAAGGCCTGTCTaGTCTCCAGCCGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLGKRPV*SPAGVP
Trigger: TGGTACACCGGCTGGAGAGCAGACAGGCCTTTTGCC...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGGCAAAAGGCCTGTCTaGTCTCCAGCCGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQGKRPV*SPAGVP
Trigger: TGGTACACCGGCTGGAGAGCAGACAGGCCTTTTGCC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAAGCGGGTGGAGACGCTaGGGGTTGTGTCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKISGWRR*GLCPGC
Trigger: ACAGCCGGGACACAACCCCCAGCGTCTCCACCCGCT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCCCCAGGACGCTCTCTaGGACGCCTTCGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIPQDAL*DAFEGG
Trigger: CCCGCCCTCGAAGGCGTCCCAGAGAGCGTCCTGGGG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGGCTGCGGCCGAGACTaGTTGCGCTTTTGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIGCGRD*LRFWVP
Trigger: CGGGACCCAAAAGCGCAACCAGTCTCGGCCGCAGCC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATGCAGCTGCGCCACCTaGCGGAACGTGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKICSCAT*RNVLAR
Trigger: CCTGGCCAACACGTTCCGCCAGGTGGCGCAGCTGCA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTAGATTCTTGCATCCCTaGCTGGGATCCACGACGCTT +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLARFLHP*LGSTTL
Trigger: AAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTAGCACAACAGCAGGATaGTCTGGAAGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTSTTAG*SGSSSG
Trigger: ACCTGATGAGCTTCCAGACCATCCTGCTGTTGTGCT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCCCTACTGCAGGTTTTaGCCAGCCCTCCAGCACAAC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQPYCRF*PALQHN
Trigger: GTTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGGAAGATATTTTGTGTaGCTGTTGCATATGATTTAC +
Preference number: 4 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLGRYFV*LLHMIY
Trigger: GTAAATCATATGCAACAGCCACACAAAATATCTTCC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTATTTTTCAGGTCGGATaGTTACTGCCCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTIFQVG*LLPHGS
Trigger: AGAGCCATGGGGCAGTAATCATCCGACCTGAAAAAT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGGCCAGACGGAGACCTTaGGGGTGGTTCGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWARRRP*GWFASP
Trigger: AGGAGATGCGAACCACCCGCAAGGTCTCCGTCTGGC...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGCGGAGTTGTGCCGAGTaGGGGAAAGGCGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLRSCAE*GKGADP
Trigger: GGGATCAGCGCCTTTCCCGCACTCGGCACAACTCCG...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLATGWTN*TSCCFN
Trigger: ATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTGGGTTTATGGGAAATaGACAAACTGGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTWVYGK*TNWCDA
Trigger: GGCATCACACCAGTTTGTGCATTTCCCATAAACCCA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTACTCTGCACCAGCAGCTaGAACCCTGTCTACAGTAAC +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLLCTSS*NPVYSN
Trigger: GTTACTGTAGACAGGGTTGCAGCTGCTGGTGCAGAG...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR GCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGCCAGACGGAGACCTTaGGGGTGGTTCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIARRRP*GWFASA
Trigger: AGCTGATGCGAACCACCCGCAAGGTCTCCGTCTGGC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615536.1
CDS-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAAGATTCTTGCATCCCTaGCTGGGATCCACGACGCTT +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLRFLHP*LGSTTL
Trigger: AAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCCCTACTGCAGGTTTTaGCCAGCCCTCCAGCACAAC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWPYCRF*PALQHN
Trigger: GTTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGCTCAGCAGCCCCAGTaGAGCCTCTCACAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLAQQPQ*SLSQVG
Trigger: CCCTACCTGTGAGAGGCTCCACTGGGGCTGCTGAGC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATCCTCAGAACGTTGTTaGCCCCCAAGGAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLSSERC*PPRRNG
Trigger: ACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAGKCTN*CDATSS
Trigger: TGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCC...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGTGCCTGCAGCTCCTaGCCTTATAGGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLACACSS*PYRKCD
Trigger: ATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAAGGGCTTTCCATCGATaGGCGTGCCTGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIRAFHR*ACLCLQ
Trigger: CTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGGCTGTAGGTGGGCGTaGTGGCATAGATGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLGCRWA*WHRWWA
Trigger: TGCCCACCATCTATGCCATCACGCCCACCTACAGCC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGGGCGTGCCTGTGCCTaGAGCTCCTGGCCTTATAGG +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIGRACA*SSWPYR
Trigger: CCTATAAGGCCAGGAGCTGCAGGCACAGGCACGCCC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTTCCATCGATGGGCGTaGCTGTGCCTGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLFHRWA*LCLQLL
Trigger: CAGGAGCTGCAGGCACAGGCACGCCCATCGATGGAA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTATCCAGCTTGCTGGTaGGACATTTTTACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAYPACW*DIFTVH
Trigger: GTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGAATGGTGGGACAAATaGGTGCACCCCAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQEWWDK*VHPRVS
Trigger: ACTTACTCTGGGGTGCACCCATTTGTCCCACCATTC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGAGCAGATGGCTGGCATaGGTATCAGTAGTGCAACCC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWSRWLA*VSVVQP
Trigger: GGGTTGCACTACTGATACTCATGCCAGCCATCTGCT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGCTGTTGTTATGATGTaGTTAACAGGGAACGTGATT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTAVVMM*LTGNVI
Trigger: AATCACGTTCCCTGTTAAGCACATCATAACAACAGC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGATCCTGCCATGTCGATaGCAAAAGGCCTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWILPCR*QKACLL
Trigger: GAGCAGACAGGCCTTTTGCCATCGACATGGCAGGAT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAISAIY*PMTRWL
Trigger: TAACCACCTTGTCATTGGCCAGTAGATTGCACTGAT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLALYPAC*WDIFTV
Trigger: GACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAG...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGCCCCCAAGGAGGAATaGTGGGACAAATGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLAPKEE*WDKWVH
Trigger: GTGCACCCATTTGTCCCACCATTCCTCCTTGGGGGC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATGTGCCTGCAGCTCCTaGCCTTATAGGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLCACSS*PYRKCD
Trigger: ATCACATTTCCTATAAGGCCAGGAGCTGCAGGCACA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGTACTGGGGGACCAGTaGTACAAATCAGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAVLGDQ*YKSAIK
Trigger: TTTTATTGCTGATTTGTACCACTGGTCCCCCAGTAC...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
3UTR CAA 72 bp TGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATaGAAGCGAGATATAGTCAGCTCTCACTTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CELKLLGSPLHL*KRDIVSSHFPV
Trigger: AACAGGGAAGTGAGAGCTGACTATATCTCGCTTCAATAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTTGGATTGGACAAAATaGCTTGAAGACTTACAGCAA +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTLDWTK*LEDLQQ
Trigger: TTGCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTGTACTGATTCAATTTaGTGTGGTGAAAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTCTDSI*CGEKQV
Trigger: AACCTGCTTTTCACCACATCAAATTGAATCAGTACA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTACCTGACATTCCTTGCTaGAACGCATCTAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLPDIPC*NASSSP
Trigger: AGGGGAACTAGATGCGTTTCAGCAAGGAATGTCAGG...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAACATGGTCAACATGCTaGAGCACACCCAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKITWSTC*STPSSG
Trigger: ACCTGAGCTGGGTGTGCTTCAGCATGTTGACCATGT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATTATCTCAGGCATCATaGGACTCCCTCTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLLSQAS*DSLSVT
Trigger: GGTGACAGAGAGGGAGTCTCATGATGCCTGAGATAA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGACAGAGTCCAAGCATaGTGGTGGGCATGCCCATGC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIDRVQA*WWACPC
Trigger: GCATGGGCATGCCCACCATCATGCTTGGACTCTGTC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAACCAGCCAACAACTTTaGCGTTTTCCACCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKITSQQL*RFPPAD
Trigger: GTCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTAACTGCACCAGTTGCTaGTTCAATTTATACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTNCTSC*FNLYLN
Trigger: ATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTACAAACTGCACCAGTTaGTGCTTCAATTTATACCTC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLATNCTS*CFNLYL
Trigger: GAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGAGTAAGTTTGGCCTaGCGCAAGCTCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIRVSLA*RKLSSP
Trigger: GGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCGGAGACCTTGCGGGTaGTTCGCATCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIRRPCG*FASPGR
Trigger: TCTTCCAGGAGATGCGAACCACCCGCAAGGTCTCCG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGACATCCTCTTCCATATaGATCCACTGGCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQTSSSI*IHWLDK
Trigger: TTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTCAGGAACGTTTAGCTaGCAAAATACTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLASGTFS*QNTCLF
Trigger: AAACAGACAAGTATTTTGTCAGCTAAACGTTCCTGA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTGGTTTTTATTTCCTATaGTGTATACTGCCACTAACC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAGFYFL*CILPLT
Trigger: GGTTAGTGGCAGTATACATCATAGGAAATAAAAACC...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATCCAGAACTACCACCTaGCATTCCTTGCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKISRTTT*HSLLKR
Trigger: GCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAGCAGATGGCTGGCATaGGTATCAGTAGTGCAACCC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLSRWLA*VSVVQP
Trigger: GGGTTGCACTACTGATACTCATGCCAGCCATCTGCT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGATAATGCAGAAGGGTaGTGCTGTTCTCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIDNAEG*CCSPAL
Trigger: GAGTGCTGGAGAACAGCATCACCCTTCTGCATTATC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAAGAAAGTCAGATTCTTaGATCCCTGGCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLRKSDS*IPGWDP
Trigger: TGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCT...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTCATTTCTATTTCAGGTaGTGTGTTCTGACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAHFYFR*CVLTFL
Trigger: GAGAAAAGTCAGAACACAGCACCTGAAATAGAAATG...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGATCCTGCCATGTCGATaGCAAAAGGCCTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLILPCR*QKACLL
Trigger: GAGCAGACAGGCCTTTTGCCATCGACATGGCAGGAT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATCTTGCATCCCTGGCTaGGATCCACGACGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKISCIPG*DPRRLN
Trigger: ATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATTCACTGTGTCCAGGTaGTACTTTGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIFTVSR*YFGSLA
Trigger: AGCCAACGAGCCAAAGTACCACCTGGACACAGTGAA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATATGGATCCACTGGCTaGACAAACTGCACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIYGSTG*TNCTSC
Trigger: GCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAATCAGTGCAATCTACTaGCCAATGACAAGGTGGTTA +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLISAIY*PMTRWL
Trigger: TAACCACCTTGTCATTGGCCAGTAGATTGCACTGAT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCTTTATCCAGCTTGCTaGTGGGACATTTTTACAGTC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLYPAC*WDIFTV
Trigger: GACTGTAAAAATGTCCCACCAGCAAGCTGGATAAAG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTCCTCAGAACGTTGTTaGCCCCCAAGGAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLSSERC*PPRRNG
Trigger: ACCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATTCCCTGTTTCGTACTaGGGGACCAGTGGTACAAAT +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLFPVSY*GTSGTN
Trigger: ATTTGTACCACTGGTCCCCCAGTACGAAACAGGGAA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGATGTACTGCATTATTTaGGAAGCTGCTCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQMYCII*EAAQLA
Trigger: TGCAAGTTGAGCAGCTTCTCAAATAATGCAGTACAT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGAATTCCCATAAGGTGTaGACCAGACATCCCCTCATA +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWNSHKV*TRHPLI
Trigger: TATGAGGGGATGTCTGGTTCACACCTTATGGGAATT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGGTGTGGGTTGGTCTaGGTAGTAGGAGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIRCGLV*VVGAAK
Trigger: TTTGGCTGCTCCTACTACTCAGACCAACCCACACCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTATGAAGACGTGATCTaGTTCTTCAGACACTTATGC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQYEDVI*FFRHLC
Trigger: GCATAAGTGTCTGAAGAAGCAGATCACGTCTTCATA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGAAGCTTTATCCAGCTTaGTGGTGGGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQKLYPA*WWDIFT
Trigger: TGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTT...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAAAGCTTTATCCAGCTTaGTGGTGGGACATTTTTACA +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLKLYPA*WWDIFT
Trigger: TGTAAAAATGTCCCACCAGCAAGCTGGATAAAGCTT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTGGTGGGCATGCCCATaGCCAATGGGTTTATGGGAA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIWWACP*PMGLWE
Trigger: TTCCCATAAACCCATTGGGCATGGGCATGCCCACCA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAACAGCAGGATGGTCTaGAAGCTCATCAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLNSRMV*KLIRSD
Trigger: GTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGTATCCAGCTTGCTGGTaGGACATTTTTACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWYPACW*DIFTVH
Trigger: GTGGACTGTAAAAATGTCCCACCAGCAAGCTGGATA...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAGGGAAATGCACAAACTaGTGTGATGCCACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIGKCTN*CDATSS
Trigger: TGAGGAAGTGGCATCACACCAGTTTGTGCATTTCCC...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGTGCCCAATGGGTTTATaGGAAATGCACAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWCPMGL*EMHKLV
Trigger: CACCAGTTTGTGCATTTCCCATAAACCCATTGGGCA...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGTGCAGGTGTATTTATaGGACCCACAAATATACCAT +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQVQVYL*DPQIYH
Trigger: ATGGTATATTTGTGGGTCCCATAAATACACCTGCAC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCATCTTATCTCTGTATaGCACAGGAACCATTCAACA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQHLISV*HRNHST
Trigger: TGTTGAATGGTTCCTGTGCCATACAGAGATAAGATG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTCAGGAACGTTTAGCTaGCAAAATACTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQSGTFS*QNTCLF
Trigger: AAACAGACAAGTATTTTGTCAGCTAAACGTTCCTGA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTAATATTAAGAATGATCTaGTTGACCGTGTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLILRMI*LTVLVC
Trigger: ACAGACCAACACGGTCAATCAGATCATTCTTAATAT...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGATAATGCAGAAGGGTaGTGCTGTTCTCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIDNAEG*CCSPAL
Trigger: GAGTGCTGGAGAACAGCATCACCCTTCTGCATTATC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATCAAGAGTGGTATCTTaGAGTATCGGCACTGTACAA +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLSRVVS*SIGTVQ
Trigger: TTGTACAGTGCCGATACTGCAAGATACCACTCTTGA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCCAGCACTCCATCAGTaGAATCTACTGGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIPALHQ*NLLAND
Trigger: GTCATTGGCCAGTAGATTGCACTGATGGAGTGCTGG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTACATTTCTATTTCAGGTaGTGTGTTCTGACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLHFYFR*CVLTFL
Trigger: GAGAAAAGTCAGAACACAGCACCTGAAATAGAAATG...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCAGTGTATGATGTCATaGTACATAGTTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQQCMMS*YIVWSS
Trigger: TGAAGACCAAACTATGTAGCATGACATCATACACTG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTCTTGCATCCCTGGCTaGGATCCACGACGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDISCIPG*DPRRLN
Trigger: ATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTTCACTGTGTCCAGGTaGTACTTTGGCTCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIFTVSR*YFGSLA
Trigger: AGCCAACGAGCCAAAGTACCACCTGGACACAGTGAA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTATGGATCCACTGGCTaGACAAACTGCACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIYGSTG*TNCTSC
Trigger: GCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAACAGCAGGATGGTCTaGAAGCTCATCAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDINSRMV*KLIRSD
Trigger: GTCTGACCTGATGAGCTTCCAGACCATCCTGCTGTT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGAATGGTGGGACAAATaGGTGCACCCCAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIEWWDK*VHPRVS
Trigger: ACTTACTCTGGGGTGCACCCATTTGTCCCACCATTC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGCATGCCCATGCCCAATaGGTTTATGGGAAATGCACA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLHAHAQ*VYGKCT
Trigger: TGTGCATTTCCCATAAACCCATTGGGCATGGGCATG...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGGTCTACAGTAACATCTaGGGATCTAGATTTATTCAC +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQVYSNI*GSRFIH
Trigger: GTGAATAAATCTAGATCCCCAGATGTTACTGTAGAC...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGTAGGTATGAAGACGTaGTCTGCTTCTTCAGACACT +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLVGMKT*SASSDT
Trigger: AGTGTCTGAAGAAGCAGATCACGTCTTCATACCTAC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGTTTTACACTTCCCATTaGTGTTCCTCCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWFYTSH*CSSSIL
Trigger: CAAAATGCTGGAGGAACATCAATGGGAAGTGTAAAA...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCTTAGTGCAGTTATTTaGTTTCGGTTCCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWLSAVI*FRFQFF
Trigger: GAAGAACTGGAACCGAAAGCAAATAACTGCACTAAG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTACTATATGGTAAATCTTaGCTTTCCTTCTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: NELHFTCELKLLGSPLHLLYGKS*LSFSYH
Trigger: GTGATAAGAGAAGGAAAGGCAAGATTTACCATATAG...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTTAAGTCTAGTGATCTaGCAGAAAGAATTCAATAGG +
Preference number: 4 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLSLVI*QKEFNR
Trigger: CCTATTGAATTCTTTCTGCCAGATCACTAGACTTAA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGTTGGATTGGACAAAATaGCTTGAAGACTTACAGCAA +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWLDWTK*LEDLQQ
Trigger: TTGCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAA...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATTTTACACTTCCCATTaGTGTTCCTCCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIFYTSH*CSSSIL
Trigger: CAAAATGCTGGAGGAACATCAATGGGAAGTGTAAAA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGAATGTAACTGTAACGTaGACACCACTAATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLNVTVT*TPLMAR
Trigger: TCTGGCCATTAGTGGTGTTCACGTTACAGTTACATT...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTGGGTTTATGGGAAATaGACAAACTGGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIWVYGK*TNWCDA
Trigger: GGCATCACACCAGTTTGTGCATTTCCCATAAACCCA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTACAGTGTATGATGTCATaGTACATAGTTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLQCMMS*YIVWSS
Trigger: TGAAGACCAAACTATGTAGCATGACATCATACACTG...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGGTTCCATGTAGTGAGTaGTTTTGTTGTTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWVPCSE*FCCCSL
Trigger: TAAACTGCAACAACAAAAGCACTCACTACATGGAAC...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGTCATGCTACATAGTTTaGTCTTCACAGTGGAAGATA +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWSCYIV*SSQWKI
Trigger: TATCTTCCACTGTGAAGACCAAACTATGTAGCATGA...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGCATTATTTGAGAAGCTaGTCAACTTGCAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWHYLRS*STCKIS
Trigger: ACTGATTTTGCAAGTTGAGCAGCTTCTCAAATAATG...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATTAAGTCTAGTGATCTaGCAGAAAGAATTCAATAGG +
Preference number: 4 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLLSLVI*QKEFNR
Trigger: CCTATTGAATTCTTTCTGCCAGATCACTAGACTTAA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGGGAAGATATTTTGTGTaGCTGTTGCATATGATTTAC +
Preference number: 4 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWGRYFV*LLHMIY
Trigger: GTAAATCATATGCAACAGCCACACAAAATATCTTCC...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGGTTTGGTCTTCACAGTaGAAGATATTTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLVWSSQ*KIFCVA
Trigger: AGCCACACAAAATATCTTCCACTGTGAAGACCAAAC...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGTACTGGGGGACCAGTaGTACAAATCAGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIVLGDQ*YKSAIK
Trigger: TTTTATTGCTGATTTGTACCACTGGTCCCCCAGTAC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTACATAGTGCTAACATaGAGACCTTTTTCTGCACTA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLYIVLT*RPFSAL
Trigger: TAGTGCAGAAAAAGGTCTTCATGTTAGCACTATGTA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGCAGGTAAACAGTCTTaGGTTACCACATGGATTAAA +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIAGKQS*VTTWIK
Trigger: TTTAATCCATGTGGTAACTCAAGACTGTTTACCTGC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTACAAACTGCACCAGTTaGTGCTTCAATTTATACCTC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDITNCTS*CFNLYL
Trigger: GAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGAAGCTGCTCAACTTaGAAAATCAGTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIRSCST*KISFPL
Trigger: GAGAGGAAAACTGATTTTGCAAGTTGAGCAGCTTCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR GCA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATATTCTTCAGACACTTATaGCTGATTAGTGATGTAGTT +
Preference number: 4 (lower is better)
Translates to: CAVVMMCLTGNVISERKIFFRHL*LISDVV
Trigger: AACTACATCACTAATCAGGCATAAGTGTCTGAAGAA...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGTTTGGTCTTCACAGTaGAAGATATTTTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIVWSSQ*KIFCVA
Trigger: AGCCACACAAAATATCTTCCACTGTGAAGACCAAAC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CCA 90 bp CCAGTGGTACAAATCAGCAATAAAACAGTGTATGATGTCATGCTACATAGTTTGTTTGATAGCTTATTTTaGTGTTTGTCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PVVQISNKTVYDVMLHSLFDSLF*CLSQGT
Trigger: TGTCCCCTGAGACAAACACCAAAATAAGCTATCAAA...CAAACTATGTAGCATGACATCATACACTGTTTTATTGCTGATTTGTACCACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTTTGGACAAAATGACTTaGAGACTTACAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDILDKMT*RLTANP
Trigger: AGGATTTGCTGTAAGTCTTCAAGTCATTTTGTCCAA...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR TCA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAAAACAAACAATACCTaGATGCTCTGTAGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIKTNNT*MLCSLN
Trigger: GTTTAGGCTACAGAGCATTCAGGTATTGTTTGTTTT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp GCTCAGTGGCGCGCGGCAGCCCGGGCCGCTTGTAGCGCCGCGGCGTaGGCACGTGCAGGTGAGTGCTGGGCAGCCCGGCCCGCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AQWRAAARAACSAAA*ARAGECWAARPAPG
Trigger: TCCTGGCGCGGGCCGGGCTGCCCAGCACTCACCTGCACGTGCCCACGCCGCGGCGCTACAAGCGGCCCGGGCTGCCGCGCGCCACTGAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp GGTGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTGCGCTGCTCAGTaGCGCGCGGCAGCCCGGGCCGCTTGTAGCGCCGCGGCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: GASGAARRGPRCAAQ*RAAARAACSAAAWA
Trigger: TGCCCACGCCGCGGCGCTACAAGCGGCCCGGGCTGCCGCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 90 bp GCCGAGAAGCGGCACCCGGTGCGCCTCGCCGCTCCAGTCCGGCGGTaGTGCGGGCACAAGGGCTCCAGCCGCGGGCCCCCAGGACGCTCT +
Preference number: 5 (lower is better)
Translates to: AEKRHPVRLAAPVRR*CGHKGSSRGPPGRS
Trigger: AGAGCGTCCTGGGGGCCCGCGGCTGGAGCCCTTGTGCCCGCAGCACCGCCGGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCTCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 90 bp CGCGCTGGTGCTGGTGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTaGGCTGCTCAGTGGCGCGCGGCAGCCCGGGCCGCTTGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: RAGAGASGAARRGPR*AAQWRAAARAACSA
Trigger: GGCGCTACAAGCGGCCCGGGCTGCCGCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCACCAGCACCAGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 90 bp GAGAAGCGGCACCCGGTGCGCCTCGCCGCTCCAGTCCGGCGGTGCTaGGGGCACAAGGGCTCCAGCCGCGGGCCCCCAGGACGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: EKRHPVRLAAPVRRC*GHKGSSRGPPGRSL
Trigger: CAGAGAGCGTCCTGGGGGCCCGCGGCTGGAGCCCTTGTGCCCGCAGCACCGCCGGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp GCTGCGGGCACAAGGGCTCCAGCCGCGGGCCCCCAGGACGCTCTCTaGGACGCCTTCGAGGGCGGGCGGCGGCGCTGGGGGCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AAGTRAPAAGPQDAL*DAFEGGRRRWGLSF
Trigger: GAAGGAAAGCCCCCAGCGCCGCCGCCCGCCCTCGAAGGCGTCCCAGAGAGCGTCCTGGGGGCCCGCGGCTGGAGCCCTTGTGCCCGCAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp CTTCCTCACATTCCCGCCGGGGTGGCGAGGAGCGGGTGGAGACGCTaGGGGTTGTGTCCCGGCTGTGTTCGCGCGCCGCAGCGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LPHIPAGVARSGWRR*GLCPGCVRAPQRKP
Trigger: AGGCTTCCGCTGCGGCGCGCGAACACAGCCGGGACACAACCCCCAGCGTCTCCACCCGCTCCTCGCCACCCCGGCGGGAATGTGAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp GGGCCGAGGGCGCTGCAGAGACCTGGAGCCGCGGGGCTCACTACCTaGGCGTGGAGGAGCGGCAGGTTCGCGCAAGCTAGAGCGACAAGG +
Preference number: 5 (lower is better)
Translates to: GPRALQRPGAAGLTT*AWRSGRFAQARATR
Trigger: CCTTGTCGCTCTAGCTTGCGCGAACCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGCCCTCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp GGTGATGGGTGCGCTGTCCATGGGGCCGAGGGCGCTGCAGAGACCTaGAGCCGCGGGGCTCACTACCTGGGCGTGGAGGAGCGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GDGCAVHGAEGAAET*SRGAHYLGVEERQV
Trigger: AACCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGCCCTCGGCCCCATGGACAGCGCACCCATCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 90 bp CACCGCGCTCTTTCTGAAGAGTGGAAGCCGAGAAGCGGCACCCGGTaGGCCTCGCCGCTCCAGTCCGGCGGTGCTGCGGGCACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: HRALSEEWKPRSGTR*ASPLQSGGAAGTRA
Trigger: AGCCCTTGTGCCCGCAGCACCGCCGGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCTCGGCTTCCACTCTTCAGAAAGAGCGCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS TCA 90 bp CAGTGCGCAGCTTGGACAGCGGCGGCGCCAGCACTTAGGGAGTGGTaGTGGGTGCGCTGTCCATGGGGCCGAGGGCGCTGCAGAGACCTG +
Preference number: 5 (lower is better)
Translates to: QCAAWTAAAPALREW*WVRCPWGRGRCRDL
Trigger: CAGGTCTCTGCAGCGCCCTCGGCCCCATGGACAGCGCACCCATCACCACTCCCTAAGTGCTGGCGCCGCCGCTGTCCAAGCTGCGCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp AGGGCGCTGCAGAGACCTGGAGCCGCGGGGCTCACTACCTGGGCGTaGAGGAGCGGCAGGTTCGCGCAAGCTAGAGCGACAAGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: RALQRPGAAGLTTWA*RSGRFAQARATRGA
Trigger: TGCACCCCTTGTCGCTCTAGCTTGCGCGAACCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACAGGCGAGGCCCGCGTaGCGCTGCTCAGTGGCGCGC +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGQARPA*RCSVAR
Trigger: GCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCTG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 90 bp GAGTGCGGGAAAGGCGCTGATCCCCACCGCGCTCTTTCTGAAGAGTaGAAGCCGAGAAGCGGCACCCGGTGCGCCTCGCCGCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ECGKGADPHRALSEE*KPRSGTRCASPLQS
Trigger: GGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCTCGGCTTCCACTCTTCAGAAAGAGCGCGGTGGGGATCAGCGCCTTTCCCGCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 90 bp CTGGGGGTTGTGTCCCGGCTGTGTTCGCGCGCCGCAGCGGAAGCCTaGTCTCAGTCCCTTGCTCTTGTCTTCTCAGAACCTCTCCGGATC +
Preference number: 5 (lower is better)
Translates to: LGVVSRLCSRAAAEA*SQSLALVFSEPLRI
Trigger: GATCCGGAGAGGTTCTGAGAAGACAAGAGCAAGGGACTGAGAGCAGGCTTCCGCTGCGGCGCGCGAACACAGCCGGGACACAACCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACCCCTACTGCAGGTTTaGGCCAGCCCTCCAGCACAA +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGPLLQV*ASPPAQ
Trigger: TTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp CAAAAGGCCTGTCTGCTCTCCAGCCGGTGTACCAGCCAACAACTTTaGCGTTTTCCACCAGCGGACGTTCGTAGCGCCGCCCACCAACCA +
Preference number: 5 (lower is better)
Translates to: QKACLLSSRCTSQQL*RFPPADVRSAAHQP
Trigger: TGGTTGGTGGGCGGCGCTACGAACGTCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGTACACCGGCTGGAGAGCAGACAGGCCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGACACTTCCTCAGAACGTaGTTGGCCCCCAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGHFLRT*LAPKEE
Trigger: TTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTG...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAAGCCCACTACACCTATaGAAGCGAGATATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGSPLHL*KRDIVS
Trigger: GCTGACTATATCTCGCTTCAATAGGTGTAGTGGGCT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGGCCAGACGGAGACCTaGCGGGTGGTTCGCATCAGC +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTGQTET*RVVRIS
Trigger: GCTGATGCGAACCACCCGCAAGGTCTCCGTCTGGCC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615536.1
CDS-3UTR CAA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTAGACTGGTTGCGCTTTaGGGTCCCGTGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ETPSLSPLRLALSFIQLARLVAL*GPVSRA
Trigger: GGCCCGGCTCACGGGACCCAAAAGCGCAACCAGTCT...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGATGTTCCTCCAGCATTTaGGCAATCTTGGTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGCSSSI*AILVSV
Trigger: AACAGAAACCAAGATTGCCAAAATGCTGGAGGAACA...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTCACCCCAGAGTAAGTTaGGCCTGCCGCAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTHPRVS*ACRKLS
Trigger: GCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTG...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCAATATAGGTAAAACATaGGTCTCTACCCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLNIGKT*VSTRWE
Trigger: TTCCCAGCGGGTAGAGACCAATGTTTTACCTATATT...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp CACCAGCTGCATTTCAGGGCTTTCCATCGATGGGCGTGCCTGTGCCTGCAGCTCGTCATGCTACATAGTTaGGTCTTCACAGTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: HQLHFRAFHRWACLCLQLVMLHS*VFTVED
Trigger: ATCTTCCACTGTGAAGACCAAACTATGTAGCATGAC...GAGCTGCAGGCACAGGCACGCCCATCGATGGAAAGCCCTGAAATGCAGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp AAGACTTACAGCAAATCCTGCCATGTCGATGGCAAAAGGCCTGTCTaGTCTCCAGCCGGTGTACCAGCCAACAACTTTGCCGTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: KTYSKSCHVDGKRPV*SPAGVPANNFAVFH
Trigger: GTGGAAAACGGCAAAGTTGTTGGCTGGTACACCGGCTGGAGAGCAGACAGGCCTTTTGCCATCGACATGGCAGGATTTGCTGTAAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGGGTGCACCCCAGAGTAAGTTTGGCCTGCCGCAAGCTCAGCAGCCCCAGTGGAACTGTTGTTATCTGTTaGAGAAAGTCAGATTCTTGC +
Preference number: 5 (lower is better)
Translates to: WVHPRVSLACRKLSSPSGTVVIC*RKSDSC
Trigger: GCAAGAATCTGACTTTCTCAAACAGATAACAACAGT...TCCACTGGGGCTGCTGAGCTTGCGGCAGGCCAAACTTACTCTGGGGTGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATGGAGACGCTGGGGGTaGTGTCCCGGCTGTGTTCGC +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLWRRWG*CPGCVR
Trigger: GCGAACACAGCCGGGACACAACCCCCAGCGTCTCCA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAAGACTGGTTGCGCTTTaGGGTCCCGTGAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLRLVAL*GPVSRA
Trigger: GGCCCGGCTCACGGGACCCAAAAGCGCAACCAGTCT...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGGGCCAGACGGAGACCTaGCGGGTGGTTCGCATCTCC +
Preference number: 5 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWGQTET*RVVRIS
Trigger: GGAGATGCGAACCACCCGCAAGGTCTCCGTCTGGCC...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTACCAGCCAACAACTTaGCCGTTTTCCACCAGCGGA +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTYQPTT*PFSTSG
Trigger: TCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGTA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCCCCTACTGCAGGTTTaGGCCAGCCCTCCAGCACAA +
Preference number: 5 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQPLLQV*ASPPAQ
Trigger: TTGTGCTGGAGGGCTGGCCAAAACCTGCAGTAGGGG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTCACTTCCTCAGAACGTaGTTGGCCCCCAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ETPSLSPLRLALSFIQLAHFLRT*LAPKEE
Trigger: TTCCTCCTTGGGGGCCAACAACGTTCTGAGGAAGTG...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTACCTGGCGGAACGTGTaGGCCAGGCGGGTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDITWRNV*ARRVSS
Trigger: GGAGCTGACCCGCCTGGCCAACACGTTCCGCCAGGT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGTTCCTCAGAACGTTGTaGGCCCCCAAGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQFLRTL*APKEEW
Trigger: CCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAA...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTGTGAGCTAAAATTGTaGGGCAGCCCACTACACCTA +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTCELKL*GSPLHL
Trigger: TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTACATGTGAGCTAAAATaGTTGGGCAGCCCACTACAC +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTTCELK*LGSPLH
Trigger: GTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCTCAGTCCCTTGCTCTaGTCTTCTCAGAACCTCTCC +
Preference number: 5 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQLSPLL*SSQNLS
Trigger: GGAGAGGTTCTGAGAAGACAAGAGCAAGGGACTGAG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTTGGTACTTTGGCTCGTaGGCTAGATTAACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTWYFGS*ARLTFS
Trigger: AGAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCA...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGTGAGCTAAAATTGTaGGGCAGCCCACTACACCTA +
Preference number: 5 (lower is better)
Translates to: ETPSLSPLRLALSFIQLACELKL*GSPLHL
Trigger: TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTATGTCAAGGGCAGCTTaGCTCATATTTCCCATGATT +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTMSRAA*LIFPMI
Trigger: AATCATGGGAAATATGAGCAAAGCTGCCCTTGACAT...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATTCCTCAGAACGTTGTaGGCCCCCAAGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLFLRTL*APKEEW
Trigger: CCATTCCTCCTTGGGGGCCAACAACGTTCTGAGGAA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AGCATGATGGTGGGCATGCCCATGCCCAATGGGTTTATGGGAAATGCACAAACTGTCATGCTACATAGTTaGGTCTTCACAGTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SMMVGMPMPNGFMGNAQTVMLHS*VFTVED
Trigger: ATCTTCCACTGTGAAGACCAAACTATGTAGCATGAC...AGTTTGTGCATTTCCCATAAACCCATTGGGCATGGGCATGCCCACCATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS TCA 90 bp AGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTGTTATCTGTTTaGGAAAGTCAGATTCTTGCATCCCTGGCTGGGATCCACGACGCT +
Preference number: 5 (lower is better)
Translates to: SYLLSVPVLRLLLSV*ESQILASLAGIHDA
Trigger: AGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACAACAGTCGAAGAACTGGAACCGAAAGCAAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp CCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTGCTaGTTCAATTTATACCTCAATTTTCACTGTGTCCAGGTGGTACTT +
Preference number: 5 (lower is better)
Translates to: PLPYGSTGWTNCTSC*FNLYLNFHCVQVVL
Trigger: AAGTACCACCTGGACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp CATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTTaGTGCTTCAATTTATACCTCAATTTTCACTGTGTCCAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: HPLPYGSTGWTNCTS*CFNLYLNFHCVQVV
Trigger: TACCACCTGGACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp CCAGTTGCTGCTTCAATTTATACCTCAATTTTCACTGTGTCCAGGTaGTACTTTGGCTCGTTGGCTAGATTAACCTTCTCTGTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: PVAASIYTSIFTVSR*YFGSLARLTFSVRV
Trigger: CACTCGGACAGAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATACCAGCCAACAACTTaGCCGTTTTCCACCAGCGGA +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLYQPTT*PFSTSG
Trigger: TCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGTA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp TCCAGTTCTTCGACTGTTGTTATCTGTTTGAGAAAGTCAGATTCTTaGATCCCTGGCTGGGATCCACGACGCTTAAATACAGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SSSSTVVICLRKSDS*IPGWDPRRLNTAFG
Trigger: TCCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACAACAGTCGAAGAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp TTCTTGCATCCCTGGCTGGGATCCACGACGCTTAAATACAGCTTTTaGATTGGACAAAATGACTTGAAGACTTACAGCAAATCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: FLHPWLGSTTLKYSF*IGQNDLKTYSKSCH
Trigger: ATGGCAGGATTTGCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 90 bp AACTCCAAACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAATTTATACCTCAATTTTCACTGTGTC +
Preference number: 5 (lower is better)
Translates to: NSKHPLPYGSTGWTN*TSCCFNLYLNFHCV
Trigger: GACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp TTCGACTGTTGTTATCTGTTTGAGAAAGTCAGATTCTTGCATCCCTaGCTGGGATCCACGACGCTTAAATACAGCTTTTGGATTGGACAA +
Preference number: 5 (lower is better)
Translates to: FDCCYLFEKVRFLHP*LGSTTLKYSFWIGQ
Trigger: TTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACAACAGTCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp GAGACTCCCTCTCTGTCACCTCTGAGATTAGCACTAAGCTTTATCCAGCTTGCTTGCCTCTCTTGTAATTaGGATCTCTTCTTAATGTAC +
Preference number: 5 (lower is better)
Translates to: ETPSLSPLRLALSFIQLACLSCN*DLFLMY
Trigger: GTACATTAAGAAGAGATCCAAATTACAAGAGAGGCA...AGCAAGCTGGATAAAGCTTAGTGCTAATCTCAGAGGTGACAGAGAGGGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAATTGTATGTGCTAAGTGTCAGTCACATGGTCAACATGCTGAAGCACACCCAGCATGTACTGCATTATTaGAGAAGCTGCTCAACTTGC +
Preference number: 5 (lower is better)
Translates to: KLYVLSVSHMVNMLKHTQHVLHY*RSCSTC
Trigger: GCAAGTTGAGCAGCTTCTCAAATAATGCAGTACATG...CTGGGTGTGCTTCAGCATGTTGACCATGTGACTGACACTTAGCACATACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAAGCCCACTACACCTATaGAAGCGAGATATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLSPLHL*KRDIVS
Trigger: GCTGACTATATCTCGCTTCAATAGGTGTAGTGGGCT...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp ACTGTTGTTATCTGTTTGAGAAAGTCAGATTCTTGCATCCCTGGCTaGGATCCACGACGCTTAAATACAGCTTTTGGATTGGACAAAATG +
Preference number: 5 (lower is better)
Translates to: TVVICLRKSDSCIPG*DPRRLNTAFGLDKM
Trigger: CATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 90 bp TGTAGCCTAAACTCCAAACATCCTCTTCCATATGGATCCACTGGCTaGACAAACTGCACCAGTTGCTGCTTCAATTTATACCTCAATTTT +
Preference number: 5 (lower is better)
Translates to: CSLNSKHPLPYGSTG*TNCTSCCFNLYLNF
Trigger: AAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGAGTTTAGGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATGAGCTGCATTTCACATGTGAGCTAAAATTGTTGGGCAGCCCACTACACCTATGCCTCTCTTGTAATTaGGATCTCTTCTTAATGTAC +
Preference number: 5 (lower is better)
Translates to: NELHFTCELKLLGSPLHLCLSCN*DLFLMY
Trigger: GTACATTAAGAAGAGATCCAAATTACAAGAGAGGCA...TAGGTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGTGAAATGCAGCTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TTTGCTACCACCATTTACAAGAATATAGGTAAAACATTGGTCTCTACCCGCTGGAATATAGGTAAAACATaGGTCTCTACCCGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: FATTIYKNIGKTLVSTRWNIGKT*VSTRWE
Trigger: TTCCCAGCGGGTAGAGACCAATGTTTTACCTATATT...CCAGCGGGTAGAGACCAATGTTTTACCTATATTCTTGTAAATGGTGGTAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTATGTTCCTCCAGCATTTaGGCAATCTTGGTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLCSSSI*AILVSV
Trigger: AACAGAAACCAAGATTGCCAAAATGCTGGAGGAACA...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTCTCAAGAGTGGTATCTaGCAGTATCGGCACTGTACA +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDILKSGI*QYRHCT
Trigger: TGTACAGTGCCGATACTGCAAGATACCACTCTTGAG...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATAATGTCAAGGGCAGCTTaGCTCATATTTCCCATGATT +
Preference number: 5 (lower is better)
Translates to: CAVVMMCLTGNVISERKIMSRAA*LIFPMI
Trigger: AATCATGGGAAATATGAGCAAAGCTGCCCTTGACAT...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AATACAAGTTTCATCCAGAACTACCACCTGACATTCCTTGCTGAAACGCATCTAAGCATTTTGGCAATCTaGGTTTCTGTTTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: NTSFIQNYHLTFLAETHLSILAI*VSVWSL
Trigger: AAGTGACCAAACAGAAACCAAGATTGCCAAAATGCT...TAGATGCGTTTCAGCAAGGAATGTCAGGTGGTAGTTCTGGATGAAACTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTACATGTGAGCTAAAATaGTTGGGCAGCCCACTACAC +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDITCELK*LGSPLH
Trigger: GTGTAGTGGGCTGCCCAACAATTTTAGCTCACATGT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGCTTATTTTGGTGTTaGTCTCAGGGGACACCCTCT +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDISLFWC*SQGTPS
Trigger: AGAGGGTGTCCCCTGAGACAAACACCAAAATAAGCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTGACAAACTGCACCAGTaGCTGCTTCAATTTATACCT +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDIDKLHQ*LLQFIP
Trigger: AGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTC...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp TGTGCTGTTGTTATGATGTGCTTAACAGGGAACGTGATTAGTGAAAGGAAGATACTCTTATCACCAATTTaGGAAGTAAGAGAATCACAG +
Preference number: 5 (lower is better)
Translates to: CAVVMMCLTGNVISERKILLSPI*EVRESQ
Trigger: CTGTGATTCTCTTACTTCCAAAATTGGTGATAAGAG...TATCTTCCTTTCACTAATCACGTTCCCTGTTAAGCACATCATAACAACAGCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTAGCATTTTGGCAATCTaGGTTTCTGTTTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDISILAI*VSVWSL
Trigger: AAGTGACCAAACAGAAACCAAGATTGCCAAAATGCT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS-3UTR CAA 90 bp AAAACAGTGTATGATGTCATGCTACATAGTTTGGTCTTCACAGTGGAAGATATTACTGTTGTTATCTGTTaGAGAAAGTCAGATTCTTGC +
Preference number: 5 (lower is better)
Translates to: KTVYDVMLHSLVFTVEDITVVIC*RKSDSC
Trigger: GCAAGAATCTGACTTTCTCAAACAGATAACAACAGT...AATATCTTCCACTGTGAAGACCAAACTATGTAGCATGACATCATACACTGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp CACCCGGTGCGCCTCGCCGCTCCAGTCCGGCGGTGCTaGGGGCACAAGGGCTCCAGCCGCGGGCCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: HPVRLAAPVRRC*GHKGSSRGPPG
Trigger: TCCTGGGGGCCCGCGGCTGGAGCCCTTGTGCCCGCAGCACCGCCGGACTGGAGCGGCGAGGCGCACCGGGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp GCTGGTGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTaGGCTGCTCAGTGGCGCGCGGCAGCCCGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: AGASGAARRGPR*AAQWRAAARAA
Trigger: AGCGGCCCGGGCTGCCGCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCACCAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 72 bp ACAAGGGCTCCAGCCGCGGGCCCCCAGGACGCTCTCTaGGACGCCTTCGAGGGCGGGCGGCGGCGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TRAPAAGPQDAL*DAFEGGRRRWG
Trigger: CCCCCAGCGCCGCCGCCCGCCCTCGAAGGCGTCCCAGAGAGCGTCCTGGGGGCCCGCGGCTGGAGCCCTTGT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CAA 72 bp TGCTGGTGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTaGCGCTGCTCAGTGGCGCGCGGCAGCCCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: CWCLWRSQARPA*RCSVARGSPGR
Trigger: GCGGCCCGGGCTGCCGCGCGCCACTGAGCAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCACCAGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CAA 90 bp CAGCTGCGGCTCCGGCTGTGGCTGCGGCCGAGACTGGTTGCGCTTTaGGGTCCCGTGAGCCGGGCCGCCCCTGCGGAGCGGGAGTCGGGC +
Preference number: 6 (lower is better)
Translates to: QLRLRLWLRPRLVAL*GPVSRAAPAERESG
Trigger: GCCCGACTCCCGCTCCGCAGGGGCGGCCCGGCTCACGGGACCCAAAAGCGCAACCAGTCTCGGCCGCAGCCACAGCCGGAGCCGCAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp AGCACGCCGGGCTGCGCGCGCTGGTGCTGGTGCCTCTaGCGCAGCCAGGCGAGGCCCGCGTTGCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: STPGCARWCWCL*RSQARPALRCS
Trigger: TGAGCAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCACCAGCACCAGCGCGCGCAGCCCGGCGTGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp GCTTGTAGCGCCGCGGCGTGGGCACGTGCAGGTGAGTaGTGGGCAGCCCGGCCCGCGCCAGGAAGCGGCTCA +
Preference number: 6 (lower is better)
Translates to: ACSAAAWARAGE*WAARPAPGSGS
Trigger: TGAGCCGCTTCCTGGCGCGGGCCGGGCTGCCCAGCACTCACCTGCACGTGCCCACGCCGCGGCGCTACAAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CAA 72 bp CTCCGGCTGTGGCTGCGGCCGAGACTGGTTGCGCTTTaGGGTCCCGTGAGCCGGGCCGCCCCTGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: LRLWLRPRLVAL*GPVSRAAPAER
Trigger: CCGCTCCGCAGGGGCGGCCCGGCTCACGGGACCCAAAAGCGCAACCAGTCTCGGCCGCAGCCACAGCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp ATTCCCGCCGGGGTGGCGAGGAGCGGGTGGAGACGCTaGGGGTTGTGTCCCGGCTGTGTTCGCGCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: IPAGVARSGWRR*GLCPGCVRAPQ
Trigger: CTGCGGCGCGCGAACACAGCCGGGACACAACCCCCAGCGTCTCCACCCGCTCCTCGCCACCCCGGCGGGAAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 72 bp GCTCTCTGGGACGCCTTCGAGGGCGGGCGGCGGCGCTaGGGGCTTTCCTTCCTCACATTCCCGCCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: ALWDAFEGGRRR*GLSFLTFPPGW
Trigger: CCACCCCGGCGGGAATGTGAGGAAGGAAAGCCCCCAGCGCCGCCGCCCGCCCTCGAAGGCGTCCCAGAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CAA 90 bp CACATTCCCGCCGGGGTGGCGAGGAGCGGGTGGAGACGCTGGGGGTaGTGTCCCGGCTGTGTTCGCGCGCCGCAGCGGAAGCCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: HIPAGVARSGWRRWG*CPGCVRAPQRKPAL
Trigger: GAGAGCAGGCTTCCGCTGCGGCGCGCGAACACAGCCGGGACACAACCCCCAGCGTCTCCACCCGCTCCTCGCCACCCCGGCGGGAATGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp CCAGCCGCGCGCCGCCGGTCCCGGAGTTGTGCCGAGTaGGGGAAAGGCGCTGATCCCCACCGCGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: PAARRRSRSCAE*GKGADPHRALS
Trigger: AGAAAGAGCGCGGTGGGGATCAGCGCCTTTCCCGCACTCGGCACAACTCCGGGACCGGCGGCGCGCGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 72 bp TGCGCTGTCCATGGGGCCGAGGGCGCTGCAGAGACCTaGAGCCGCGGGGCTCACTACCTGGGCGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: CAVHGAEGAAET*SRGAHYLGVEE
Trigger: CTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGCCCTCGGCCCCATGGACAGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS TCA 72 bp GCTTGGACAGCGGCGGCGCCAGCACTTAGGGAGTGGTaGTGGGTGCGCTGTCCATGGGGCCGAGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AWTAAAPALREW*WVRCPWGRGRC
Trigger: GCAGCGCCCTCGGCCCCATGGACAGCGCACCCATCACCACTCCCTAAGTGCTGGCGCCGCCGCTGTCCAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp CTTTCTGAAGAGTGGAAGCCGAGAAGCGGCACCCGGTaGGCCTCGCCGCTCCAGTCCGGCGGTGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: LSEEWKPRSGTR*ASPLQSGGAAG
Trigger: GCCCGCAGCACCGCCGGACTGGAGCGGCGAGGCGCACCGGGTGCCGCTTCTCGGCTTCCACTCTTCAGAAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 72 bp GCGCTGCAGAGACCTGGAGCCGCGGGGCTCACTACCTaGGCGTGGAGGAGCGGCAGGTTCGCGCAAGCTAGA +
Preference number: 6 (lower is better)
Translates to: ALQRPGAAGLTT*AWRSGRFAQAR
Trigger: TCTAGCTTGCGCGAACCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTGCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS CCA 72 bp CAGAGACCTGGAGCCGCGGGGCTCACTACCTGGGCGTaGAGGAGCGGCAGGTTCGCGCAAGCTAGAGCGACA +
Preference number: 6 (lower is better)
Translates to: QRPGAAGLTTWA*RSGRFAQARAT
Trigger: TGTCGCTCTAGCTTGCGCGAACCTGCCGCTCCTCCACGCCCAGGTAGTGAGCCCCGCGGCTCCAGGTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp GTGTCCCGGCTGTGTTCGCGCGCCGCAGCGGAAGCCTaGTCTCAGTCCCTTGCTCTTGTCTTCTCAGAACCT +
Preference number: 6 (lower is better)
Translates to: VSRLCSRAAAEA*SQSLALVFSEP
Trigger: AGGTTCTGAGAAGACAAGAGCAAGGGACTGAGAGCAGGCTTCCGCTGCGGCGCGCGAACACAGCCGGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp TTCGCGCGCCGCAGCGGAAGCCTGCTCTCAGTCCCTTaGTCTTGTCTTCTCAGAACCTCTCCGGATCCAGCA +
Preference number: 6 (lower is better)
Translates to: FARRSGSLLSVP*SCLLRTSPDPA
Trigger: TGCTGGATCCGGAGAGGTTCTGAGAAGACAAGAGCAAGGGACTGAGAGCAGGCTTCCGCTGCGGCGCGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230053.11
CDS GCA 72 bp TGTCTGCTCTCCAGCCGGTGTACCAGCCAACAACTTTaGCGTTTTCCACCAGCGGACGTTCGTAGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: CLLSSRCTSQQL*RFPPADVRSAA
Trigger: GGCGGCGCTACGAACGTCCGCTGGTGGAAAACGGCAAAGTTGTTGGCTGGTACACCGGCTGGAGAGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp AGCAAATCCTGCCATGTCGATGGCAAAAGGCCTGTCTaGTCTCCAGCCGGTGTACCAGCCAACAACTTTGCC +
Preference number: 6 (lower is better)
Translates to: SKSCHVDGKRPV*SPAGVPANNFA
Trigger: GGCAAAGTTGTTGGCTGGTACACCGGCTGGAGAGCAGACAGGCCTTTTGCCATCGACATGGCAGGATTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp GGCTCGTTGGCTAGATTAACCTTCTCTGTCCGAGTGTaGCACACGAGAACCTTAGTGCAGTTATTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: GSLARLTFSVRV*HTRTLVQLFAF
Trigger: GAAAGCAAATAACTGCACTAAGGTTCTCGTGTGGCACACTCGGACAGAGAAGGTTAATCTAGCCAACGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CAA 72 bp TCAATTTTCACTGTGTCCAGGTGGTACTTTGGCTCGTaGGCTAGATTAACCTTCTCTGTCCGAGTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: SIFTVSRWYFGS*ARLTFSVRVCH
Trigger: GTGGCACACTCGGACAGAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CAA 90 bp CAGTTATTTGCTTTCGGTTCCAGTTCTTCGACTGTTGTTATCTGTTaGAGAAAGTCAGATTCTTGCATCCCTGGCTGGGATCCACGACGC +
Preference number: 6 (lower is better)
Translates to: QLFAFGSSSSTVVIC*RKSDSCIPGWDPRR
Trigger: GCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp CCGAGTGTGCCACACGAGAACCTTAGTGCAGTTATTTaGTTTCGGTTCCAGTTCTTCGACTGTTGTTATCTG +
Preference number: 6 (lower is better)
Translates to: PSVPHENLSAVI*FRFQFFDCCYL
Trigger: CAGATAACAACAGTCGAAGAACTGGAACCGAAAGCAAATAACTGCACTAAGGTTCTCGTGTGGCACACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CAA 90 bp ACATCCTCTTCCATATGGATCCACTGGCTGGACAAACTGCACCAGTaGCTGCTTCAATTTATACCTCAATTTTCACTGTGTCCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: TSSSIWIHWLDKLHQ*LLQFIPQFSLCPGG
Trigger: ACCACCTGGACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp CCATATGGATCCACTGGCTGGACAAACTGCACCAGTTaGTGCTTCAATTTATACCTCAATTTTCACTGTGTC +
Preference number: 6 (lower is better)
Translates to: PYGSTGWTNCTS*CFNLYLNFHCV
Trigger: GACACAGTGAAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp CCCTGGCTGGGATCCACGACGCTTAAATACAGCTTTTaGATTGGACAAAATGACTTGAAGACTTACAGCAAA +
Preference number: 6 (lower is better)
Translates to: PWLGSTTLKYSF*IGQNDLKTYSK
Trigger: TTTGCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp TGTTATCTGTTTGAGAAAGTCAGATTCTTGCATCCCTaGCTGGGATCCACGACGCTTAAATACAGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: CYLFEKVRFLHP*LGSTTLKYSFW
Trigger: CCAAAAGCTGTATTTAAGCGTCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTCAAACAGATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp AACTCCAAACATCCTCTTCCATATGGATCCACTGGCTaGACAAACTGCACCAGTTGCTGCTTCAATTTATAC +
Preference number: 6 (lower is better)
Translates to: NSKHPLPYGSTG*TNCTSCCFNLY
Trigger: GTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATGTTTGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS GCA 72 bp CATCCTCTTCCATATGGATCCACTGGCTGGACAAACTaGACCAGTTGCTGCTTCAATTTATACCTCAATTTT +
Preference number: 6 (lower is better)
Translates to: HPLPYGSTGWTN*TSCCFNLYLNF
Trigger: AAAATTGAGGTATAAATTGAAGCAGCAACTGGTGCAGTTTGTCCAGCCAGTGGATCCATATGGAAGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CCA 72 bp GCTTCAATTTATACCTCAATTTTCACTGTGTCCAGGTaGTACTTTGGCTCGTTGGCTAGATTAACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ASIYTSIFTVSR*YFGSLARLTFS
Trigger: AGAGAAGGTTAATCTAGCCAACGAGCCAAAGTACCACCTGGACACAGTGAAAATTGAGGTATAAATTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1
CDS CAA 72 bp ACGCTTAAATACAGCTTTTGGATTGGACAAAATGACTaGAAGACTTACAGCAAATCCTGCCATGTCGATGGC +
Preference number: 6 (lower is better)
Translates to: TLKYSFWIGQND*KTYSKSCHVDG
Trigger: GCCATCGACATGGCAGGATTTGCTGTAAGTCTTCAAGTCATTTTGTCCAATCCAAAAGCTGTATTTAAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230053.11
ENST00000615536.1