RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109956

Ensembl transcript IDs: ENST00000312527.9, ENST00000392580.5, ENST00000524765.1, ENST00000531510.1, ENST00000531778.1

Found 874 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCCCACTGCACCTGCTCCTGCAGCCCCGTCAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCC +
Preference number: 1 (lower is better)
Translates to: RPLHLLLQPRQCGEL*GGALEHQLGWCWTP
Trigger: GGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTaGGCGCCCACTGCACCTGCTCCTGCAGCCCCGTCAGTGCGGGGA +
Preference number: 1 (lower is better)
Translates to: GLLISLPPCITAGPV*APTAPAPAAPSVRG
Trigger: TCCCCGCACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 90 bp CACTTGACTGCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTaGAGGGCCAGTGTGGGCGCCCACTGCACCTGCTCCTGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: HLTAGSSYLPPALHH*RASVGAHCTCSCSP
Trigger: GGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGCAGTCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAGTaGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCT +
Preference number: 1 (lower is better)
Translates to: GLAAEVGGGEAVCGQ*GRGVLSPGQAVTCA
Trigger: AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp AGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTaGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAA +
Preference number: 1 (lower is better)
Translates to: RCAGAPAWLVLDTPP*PSGLSGPGHAGWRE
Trigger: TTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 90 bp GCAGGGGCCCAGGAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTaGTCTCTGGTCTTCAGAATTCCCTGGCTGGGTGTCCTGTGTGGT +
Preference number: 1 (lower is better)
Translates to: AGAQERSRALVMPVG*SLVFRIPWLGVLCG
Trigger: ACCACACAGGACACCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTCCTGGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTaGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAG +
Preference number: 1 (lower is better)
Translates to: ALVMPVGCSLVFRIP*LGVLCGRAEPRDRE
Trigger: CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 90 bp CCACCATGGGCTCACTCCACCCTGAGGTCTGTGGCTCTGAAGAGCTaGAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGTCCAGGCGAGGG +
Preference number: 1 (lower is better)
Translates to: PPWAHSTLRSVALKS*RKRRFPSPVQSRRG
Trigger: CCCTCGCCTGGACTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCTCAGGGTGGAGTGAGCCCATGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GCTGGTGCTGGACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTaGTCACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGC +
Preference number: 1 (lower is better)
Translates to: AGAGHPTLAIRSLGP*SRWMERTTGLGFLC
Trigger: GCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAGCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 90 bp GGCCTCAGACCAGCCAAGCTGACCTTGGCACTTGGCTGGCTTCTGTaGGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCAC +
Preference number: 1 (lower is better)
Translates to: GLRPAKLTLALGWLL*GSRVPTHKLTTCAH
Trigger: GTGGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGCCAAGTGCCAAGGTCAGCTTGGCTGGTCTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 90 bp ACACCCTCTGAAGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTaGAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: TPSEESGGRRTQLRG*KLMPGYFQVAQWEG
Trigger: CCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCTTCAGAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR GCA 90 bp CCCCCATGCAGGGCTGGGTGCCTGTTGGGATCCAAGACAGCCTTATaGTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTATGTCTG +
Preference number: 1 (lower is better)
Translates to: PPCRAGCLLGSKTAL*SVNVNQRRATEVCL
Trigger: CAGACATACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCCTGCATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GGACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTaGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCT +
Preference number: 1 (lower is better)
Translates to: GHPTLAIRSLGPWSR*MERTTGLGFLCLNS
Trigger: AGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 90 bp CTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTaGAGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTT +
Preference number: 1 (lower is better)
Translates to: LPAEKSARCLEGDTL*RVWWQKDPAAWVKV
Trigger: AACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCTTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR GCA 90 bp CCCTGGTCACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTTGTTCTGGCATCAGGCTGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: PWSRWMERTTGLGFL*LNSLSFVLASGWAL
Trigger: GAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 90 bp AGGCACACTGTTCTTTCTCCAGGATGGAAAGTGGACAGCTGGACATaGGGTGGGCTAGCTCTGCATGCTCCTGACTTAGGGAGAAATAAC +
Preference number: 1 (lower is better)
Translates to: RHTVLSPGWKVDSWT*GGLALHAPDLGRNN
Trigger: GTTATTTCTCCCTAAGTCAGGAGCATGCAGAGCTAGCCCACCTCATGTCCAGCTGTCCACTTTCCATCCTGGAGAAAGAACAGTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp TTCCAAGGGCTTGGTTTCCAAAGTGACATCCAGGGTGTAAGAGGTTaGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCTGATTCCATCA +
Preference number: 1 (lower is better)
Translates to: FQGLGFQSDIQGVRG*GKRPARWLRDLIPS
Trigger: TGATGGAATCAGATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTCACTTTGGAAACCAAGCCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GGATTTCTGTGCTTAAATTCTCTGTCCTTTGTTCTGGCATCAGGCTaGGCTCTCTCAGAAGCCCCCAGAATAGAAAGGAGGGTGATGGTG +
Preference number: 1 (lower is better)
Translates to: GFLCLNSLSFVLASG*ALSEAPRIERRVMV
Trigger: CACCATCACCCTCCTTTCTATTCTGGGGGCTTCTGAGAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAGAATTTAAGCACAGAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 90 bp GGGAAAACGTCCTGCAAGGTGGCTCAGGGATCTGATTCCATCAGATaGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGG +
Preference number: 1 (lower is better)
Translates to: GKTSCKVAQGSDSIR*SHEYCGRLNPSQNR
Trigger: CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGATCCCTGAGCCACCTTGCAGGACGTTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 90 bp GAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCATTTCTaGTTTATAACAAACTCATTCCCAATAAAGATGAAGGCTGCAGTC +
Preference number: 1 (lower is better)
Translates to: EQTGFGKQWSSWTHF*FITNSFPIKMKAAV
Trigger: GACTGCAGCCTTCATCTTTATTGGGAATGAGTTTGTTATAAATCAGAAATGGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACTGAGGTACAGGGGGTaGCTATTAGGCCCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTLRYRG*LLGPGS
Trigger: GGAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCCAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: AGSSYLPPALHHCRASVGQCGEL*GGALEH
Trigger: GTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTG...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGAGGGACCATCAGCCGTaGGGAGAGGATGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLRDHQP*GEDGRP
Trigger: TGGCCTTCCATCCTCTCCCCACGGCTGATGGTCCCT...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGAGCACCAGCTTGGCTaGTGCTGGACACCCCACCCT +
Preference number: 2 (lower is better)
Translates to: AGSSYLPPALHHCRASVGEHQLG*CWTPHP
Trigger: AGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTC...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCTGGAGCACCAGCTTaGCTGGTGCTGGACACCCCA +
Preference number: 2 (lower is better)
Translates to: AGSSYLPPALHHCRASVGAGAPA*LVLDTP
Trigger: TGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGC...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGCAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREQCGEL*GGALEH
Trigger: GTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTG...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGTTCTGGCATCAGGCTaGGCTCTCTCAGAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRVLASG*ALSEAP
Trigger: GGGGGCTTCTGAGAGAGCCCAGCCTGATGCCAGAAC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACTCTGTCCTTTGTTCTaGCATCAGGCTGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTLCPLF*HQAGLS
Trigger: AGAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCTCTGGGGAGGTGCGCTaGAGCACCAGCTTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLSGEVR*STSLAG
Trigger: ACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTAGTGTGGGCGCCCACTaGACCTGCTCCTGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: ERSRALVMPVGCSLVFRISVGAH*TCSCSP
Trigger: GGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACT...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCGCCGTGGGGAGAGGATaGAAGGCCAAGAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLAVGRG*KAKNRV
Trigger: GACCCTGTTCTTGGCCTTCCATCCTCTCCCCACGGC...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGTCTGGGGAGGTGCGCTaGAGCACCAGCTTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RIPWLGVLCGRAEPRDRESGEVR*STSLAG
Trigger: ACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCCCACAGAGGTATGTCTaGTTTGGGGGCAGCTCTCGG +
Preference number: 2 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLPQRYV*FGGSSR
Trigger: CCGAGAGCTGCCCCCAAATCAGACATACCTCTGTGG...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGCTCCCGCCACAGCCTaGGGTACAGGGGGTGCCTAT +
Preference number: 2 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQAPATA*GTGGAY
Trigger: ATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGGAGCAGAGCGCTCGTaGTGCCCGTGGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPGAERS*CPWAAL
Trigger: GAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGGAGCAGAGCGCTCGTaGTGCCCGTGGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSGAERS*CPWAAL
Trigger: GAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTGCCGTGGGGAGAGGATaGAAGGCCAAGAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCAAVGRG*KAKNRV
Trigger: GACCCTGTTCTTGGCCTTCCATCCTCTCCCCACGGC...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCCATGCTCCACTTGACTaGGGGGTCTTCTTATCTCCC +
Preference number: 2 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLHAPLD*GVFLSP
Trigger: GGGAGATAAGAAGACCCCGCAGTCAAGTGGAGCATG...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCTCCTCTTTCCAGGCTaGAGGAGGTCCCACCTTGCC +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPLLFPG*RRSHLA
Trigger: GGCAAGGTGGGACCTCCTGCAGCCTGGAAAGAGGAG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCAGGGACCATCAGCCGTaGGGAGAGGATGGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPRDHQP*GEDGRP
Trigger: TGGCCTTCCATCCTCTCCCCACGGCTGATGGTCCCT...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCTTAGGAGTCGGCCTTaGAGGGACCATCAGCCGTGG +
Preference number: 2 (lower is better)
Translates to: ERSRALVMPVGCSLVFRILRSRP*RDHQPW
Trigger: CCACGGCTGATGGTCCCTCCAAGGCCGACTCCTAAG...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCTGGACACCCCACCCTaGCCATCAGGTCTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPLDTPP*PSGLSG
Trigger: GCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATACTAGAGAGCCCGGCTaGGCCAGGGGGTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: LASEGAGNRLGLENSGHHTREPG*ARGSEP
Trigger: GGGCTCTGACCCCCTGGCCCAGCCGGGCTCTCTAGT...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTACCCGCCCTGCATCACTaGAGGGCCAGTGTGGGCGCC +
Preference number: 2 (lower is better)
Translates to: SKTALCSVNVNQRRATEVPALHH*RASVGA
Trigger: GGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGG...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCCATGCAGGGCTGGGTaGCTGTTGGGATCCAAGACA +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPPCRAG*LLGSKT
Trigger: TGTCTTGGATCCCAACAGGCACCCAGCCCTGCATGG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCAGCTTGGCTGGTGCTaGACACCCCACCCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPQLGWC*TPHPGH
Trigger: ATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCAGCTTGGCTGGTGCTaGACACCCCACCCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSQLGWC*TPHPGH
Trigger: ATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGAGCACCAGCTTGGCTaGTGCTGGACACCCCACCCT +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSEHQLG*CWTPHP
Trigger: AGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATCAGAGCCCTTTCCAGTaGGCCCCAGAGGCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LASEGAGNRLGLENSGHHQSPFQ*APEAWG
Trigger: TCCCCAGGCCTCTGGGGCCCACTGGAAAGGGCTCTG...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGGAGTGGGTTCTGAATaGCCCTCAGACCTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPGVGSE*PSDLSW
Trigger: CCAGGAGAGGTCTGAGGGCCATTCAGAACCCACTCC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCAGGTCTCTCGGGCCCTaGTCACGCTGGATGGAGAGA +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSRSLGP*SRWMER
Trigger: TCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCT...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGTGGACAGCTGGACATaGGGTGGGCTAGCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPVDSWT*GGLALH
Trigger: ATGCAGAGCTAGCCCACCTCATGTCCAGCTGTCCAC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCATGCTCCACTTGACTaGGGGGTCTTCTTATCTCCC +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPHAPLD*GVFLSP
Trigger: GGGAGATAAGAAGACCCCGCAGTCAAGTGGAGCATG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCTACCCCTTTGCCACTaGTGGAGGAGAAGGGGTAAA +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPLPLCH*WRRRGK
Trigger: TTTACCCCTTCTCCTCCAGCAGTGGCAAAGGGGTAG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCTTTCCCAGCCCCTCTaGTACTCCAGAGTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPLSQPL*YSRVPP
Trigger: AGGAGGGACTCTGGAGTAGCAGAGGGGCTGGGAAAG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCTCTGTCCTTTGTTCTaGCATCAGGCTGGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: ERSRALVMPVGCSLVFRILCPLF*HQAGLS
Trigger: AGAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAG...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGAGGTATGTCTGATTTaGGGGCAGCTCTCGGGAAGA +
Preference number: 2 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQEVCLI*GQLSGR
Trigger: TCTTCCCGAGAGCTGCCCCCAAATCAGACATACCTC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGCAGTGTGTGGACAGTaGGGCCGTGGGGTTCTTAGT +
Preference number: 2 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPAVCGQ*GRGVLS
Trigger: ACTAAGAACCCCACGGCCCCACTGTCCACACACTGC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCAGGGTGTAAGAGGTTaGGGAAAACGTCCTGCAAGG +
Preference number: 2 (lower is better)
Translates to: AGFCEAVECPHISSPPVPQGVRG*GKRPAR
Trigger: CCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATGGGCTGGGTGCCTGTTaGGATCCAAGACAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDGLGAC*DPRQPY
Trigger: ATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCC...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGTGATGCCCGTGGGCTaGTCTCTGGTCTTCAGAATT +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSVMPVG*SLVFRI
Trigger: AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCAC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAGTTCTGGCATCAGGCTaGGCTCTCTCAGAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SKTALCSVNVNQRRATEVVLASG*ALSEAP
Trigger: GGGGGCTTCTGAGAGAGCCCAGCCTGATGCCAGAAC...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATACCTCTTCAGTAGGCTaGGGCCCTTTCCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDTSSVG*GPFLFL
Trigger: GAGGAAAAGGAAAGGGCCCCAGCCTACTGAAGAGGT...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTGLGFL*LNSLSF
Trigger: AAAGGACAGAGAATTTAAGCACAGAAATCCCAGACC...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIGLGFL*LNSLSF
Trigger: AAAGGACAGAGAATTTAAGCACAGAAATCCCAGACC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGGGCGCCCACTGCACCTaGTCCTGCAGCCCCGTCAGT +
Preference number: 2 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRGAHCT*SCSPVS
Trigger: ACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCC...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGTTCTTTCTCCAGGATaGAAAGTGGACAGCTGGACA +
Preference number: 2 (lower is better)
Translates to: LASEGAGNRLGLENSGHHVLSPG*KVDSWT
Trigger: TGTCCAGCTGTCCACTTTCCATCCTGGAGAAAGAAC...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGACTGCAGGGCCAGTGTaGGCGCCCACTGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMTAGPV*APTAPA
Trigger: AGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGT...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGCCCACTGCCCACCATaGGCTCACTCCACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMAHCPP*AHSTLR
Trigger: CCTCAGGGTGGAGTGAGCCCATGGTGGGCAGTGGGC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCTCTGATTCCATCAGATaGTCTCATGAATACTGTGGG +
Preference number: 2 (lower is better)
Translates to: LSHATPLASKGLVSKVTSSDSIR*SHEYCG
Trigger: CCCACAGTATTCATGAGACCATCTGATGGAATCAGA...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGATCTCCCTCCCGCCCTaGATCACTGCAGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRISLPP*ITAGPV
Trigger: CACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGAT...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGCTGGAGCACCAGCTTaGCTGGTGCTGGACACCCCA +
Preference number: 2 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQAGAPA*LVLDTP
Trigger: TGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR TCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGCCAAGAACAGGGTCTaGGGAGGAGGCTCCTGCATC +
Preference number: 2 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQAKNRV*GGGSCI
Trigger: GATGCAGGAGCCTCCTCCTCAGACCCTGTTCTTGGC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGCCACCCACTCAGGAGTaGGTTCTGAATGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMPPTQE*VLNGPQ
Trigger: CTGAGGGCCATTCAGAACCCACTCCTGAGTGGGTGG...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGCCTGGTCACGCTGGATaGAGAGAACAACAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMPGHAG*REQQVW
Trigger: CCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGG...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAATCAGAATTCCCTGGCTaGGTGTCCTGTGTGGTCGTG +
Preference number: 2 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQSEFPG*VSCVVV
Trigger: CACGACCACACAGGACACCCAGCCAGGGAATTCTGA...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGGGCTGGGTGCCTGTTaGGATCCAAGACAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMGLGAC*DPRQPY
Trigger: ATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGTTAGGGAATGGCCTTaGCCTCCCTCCTCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQVREWP*PPSSFQ
Trigger: CTGGAAAGAGGAGGGAGGCCAAGGCCATTCCCTAAC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGTCCAAGACAGCCTTATaGTCTGTAAACGTGAACCAG +
Preference number: 2 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRSKTAL*SVNVNQ
Trigger: CTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 72 bp GCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTaGACCTGCTCCTGCAGCCCCGTCAGTGCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: ALHHCRASVGAH*TCSCSPVSAGS
Trigger: GCTCCCCGCACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACGCTGGAGCACCAGCTaGGCTGGTGCTGGACACCCC +
Preference number: 3 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTRWSTS*AGAGHP
Trigger: GGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 72 bp CATCACTGCAGGGCCAGTGTGGGCGCCCACTGCACCTaGTCCTGCAGCCCCGTCAGTGCGGGGAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: HHCRASVGAHCT*SCSPVSAGSSG
Trigger: CCCAGAGCTCCCCGCACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGTGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp CACCTGCTCCTGCAGCCCCGTCAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: HLLLQPRQCGEL*GGALEHQLGWC
Trigger: GCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTGACGGGGCTGCAGGAGCAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 72 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTaGAGGGCCAGTGTGGGCGCCCACTGCACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: AGSSYLPPALHH*RASVGAHCTCS
Trigger: GGAGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp GGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTaGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGA +
Preference number: 3 (lower is better)
Translates to: GAPAWLVLDTPP*PSGLSGPGHAG
Trigger: TCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp GAGCTCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTaGTGCTGGACACCCCACCCTGGCCATCAGGTCTCT +
Preference number: 3 (lower is better)
Translates to: ELWGGALEHQLG*CWTPHPGHQVS
Trigger: AGAGACCTGATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp AGGAGAATGAGCCGGATCACCACTAGAGAGCCCGGCTaGGCCAGGGGGTCAGAGCCCTTTCCAGTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: RRMSRITTREPG*ARGSEPFPVGP
Trigger: GGGGCCCACTGGAAAGGGCTCTGACCCCCTGGCCCAGCCGGGCTCTCTAGTGGTGATCCGGCTCATTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 72 bp GGACAGGGAGCCAGGGAGGGCCATGCTCCACTTGACTaGGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCA +
Preference number: 3 (lower is better)
Translates to: GQGAREGHAPLD*GVFLSPSRPAS
Trigger: TGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCCTCCCTGGCTCCCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp GGACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTaGTCACGCTGGATGGAGAGAACAACAGGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: GHPTLAIRSLGP*SRWMERTTGLG
Trigger: TCCCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCGCTGGAGCACCAGCTaGGCTGGTGCTGGACACCCC +
Preference number: 3 (lower is better)
Translates to: AGFCEAVECPHISSPPVPRWSTS*AGAGHP
Trigger: GGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 72 bp ATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTaGCGACGCCCTCCACTCCTGCCCACATCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: ILSGGPVGRGLW*RRPPLLPTSAL
Trigger: CAGGGCAGATGTGGGCAGGAGTGGAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR GCA 72 bp CAGGAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTaGTCTCTGGTCTTCAGAATTCCCTGGCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: QERSRALVMPVG*SLVFRIPWLGV
Trigger: GACACCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp CCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTaGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACA +
Preference number: 3 (lower is better)
Translates to: PWAALWSSEFPG*VSCVVVLSPGT
Trigger: TGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp ATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTaGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: MPVGCSLVFRIP*LGVLCGRAEPR
Trigger: CCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp TTAGAACTCCTAGCCCCTGGCCTCACTCCTGTGTGGTaGGGCTTGCCAGCGAGGGAGCAGGGAACAGACTGG +
Preference number: 3 (lower is better)
Translates to: LELLAPGLTPVW*GLPAREQGTDW
Trigger: CCAGTCTGTTCCCTGCTCCCTCGCTGGCAAGCCCCACCACACAGGAGTGAGGCCAGGGGCTAGGAGTTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR GCA 72 bp GCTCACTCCACCCTGAGGTCTGTGGCTCTGAAGAGCTaGAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGTCC +
Preference number: 3 (lower is better)
Translates to: AHSTLRSVALKS*RKRRFPSPVQS
Trigger: GGACTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCTCAGGGTGGAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp TTCTTAGAACTCCTAGCCCCTGGCCTCACTCCTGTGTaGTGGGGCTTGCCAGCGAGGGAGCAGGGAACAGAC +
Preference number: 3 (lower is better)
Translates to: FLELLAPGLTPV*WGLPAREQGTD
Trigger: GTCTGTTCCCTGCTCCCTCGCTGGCAAGCCCCACCACACAGGAGTGAGGCCAGGGGCTAGGAGTTCTAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp ACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTaGATGGAGAGAACAACAGGTCTGGGATTTCTGTGC +
Preference number: 3 (lower is better)
Translates to: TLAIRSLGPWSR*MERTTGLGFLC
Trigger: GCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCAGGGCTGGGTGCCTGTaGGGATCCAAGACAGCCTTA +
Preference number: 3 (lower is better)
Translates to: AGFCEAVECPHISSPPVPRAGCL*GSKTAL
Trigger: TAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCCT...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGAGGGCCATGCTCCACTaGACTGCGGGGTCTTCTTAT +
Preference number: 3 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQRAMLH*TAGSSY
Trigger: ATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCCT...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 72 bp CCAGCCAAGCTGACCTTGGCACTTGGCTGGCTTCTGTaGGGCAGTAGAGTGCCCACACATAAGCTCACCACC +
Preference number: 3 (lower is better)
Translates to: PAKLTLALGWLL*GSRVPTHKLTT
Trigger: GGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGCCAAGTGCCAAGGTCAGCTTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp CAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTaGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: QKDPAAWVKVNA*ILSGGPVGRGL
Trigger: CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR GCA 72 bp AGGGCTGGGTGCCTGTTGGGATCCAAGACAGCCTTATaGTCTGTAAACGTGAACCAGAGGAGAGCCACAGAG +
Preference number: 3 (lower is better)
Translates to: RAGCLLGSKTAL*SVNVNQRRATE
Trigger: CTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp TGGTGGGGCTTGCCAGCGAGGGAGCAGGGAACAGACTaGGTTTGGAAAACAGTGGTCATCATGGACCCATTT +
Preference number: 3 (lower is better)
Translates to: WWGLPAREQGTD*VWKTVVIMDPF
Trigger: AAATGGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAGCCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATAGGGCCATGCTCCACTaGACTGCGGGGTCTTCTTAT +
Preference number: 3 (lower is better)
Translates to: LASEGAGNRLGLENSGHHRAMLH*TAGSSY
Trigger: ATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCCT...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 72 bp GTTCTTTCTCCAGGATGGAAAGTGGACAGCTGGACATaGGGTGGGCTAGCTCTGCATGCTCCTGACTTAGGG +
Preference number: 3 (lower is better)
Translates to: VLSPGWKVDSWT*GGLALHAPDLG
Trigger: CCCTAAGTCAGGAGCATGCAGAGCTAGCCCACCTCATGTCCAGCTGTCCACTTTCCATCCTGGAGAAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 72 bp GAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTaGAGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: EKSARCLEGDTL*RVWWQKDPAAW
Trigger: CCACGCAGCTGGGTCCTTCTGCCACCAGACTCTTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR CCA 72 bp CTTGGTTTCCAAAGTGACATCCAGGGTGTAAGAGGTTaGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCTG +
Preference number: 3 (lower is better)
Translates to: LGFQSDIQGVRG*GKRPARWLRDL
Trigger: CAGATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTCACTTTGGAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp GGCTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTaGAAAACAGTGGTCATCATGGACCCATTTCTGATT +
Preference number: 3 (lower is better)
Translates to: GLPAREQGTDWV*KTVVIMDPFLI
Trigger: AATCAGAAATGGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATATGAACCCTAGGTTTTaGGCTAAGAAGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: LASEGAGNRLGLENSGHHMNPRF*AKKVAS
Trigger: TGAGGCCACCTTCTTAGCCAAAAACCTAGGGTTCAT...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR TCA 72 bp ACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTaGCACCCTCTGAAGAGTCTGGTGGCAGAAGGACCC +
Preference number: 3 (lower is better)
Translates to: TASRKISKMFGR*HPLKSLVAEGP
Trigger: GGGTCCTTCTGCCACCAGACTCTTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
3UTR GCA 72 bp CGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTTGTTCTGGCATCAGGC +
Preference number: 3 (lower is better)
Translates to: RWMERTTGLGFL*LNSLSFVLASG
Trigger: GCCTGATGCCAGAACAAAGGACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCTAGAGCCTACCCCTTaGCCACTGCTGGAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRLEPTP*PLLEEK
Trigger: CTTCTCCTCCAGCAGTGGCAAAGGGGTAGGCTCTAG...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR-3UTR CAA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGGGGAGGGCAGGAGTTaGAGGCACACTGTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMGEGRS*RHTVLS
Trigger: AGAAAGAACAGTGTGCCTCAAACTCCTGCCCTCCCC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
3UTR CCA 72 bp TCCTGCAAGGTGGCTCAGGGATCTGATTCCATCAGATaGTCTCATGAATACTGTGGGAGATTAAATCCATCT +
Preference number: 3 (lower is better)
Translates to: SCKVAQGSDSIR*SHEYCGRLNPS
Trigger: AGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGATCCCTGAGCCACCTTGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTQCGEL*GGALEH
Trigger: GTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCCCGCCCTGCATCACTaGAGGGCCAGTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLPALHH*RASVGA
Trigger: GGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCCTAGACCGCTGCCCTaGGCCGCGTGCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEPRPLP*AACGSL
Trigger: GAGGGAGCCGCACGCGGCCCAGGGCAGCGGTCTAGG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAGGCCTCACTCCTGTGTaGTGGGGCTTGCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTGLTPV*WGLPAR
Trigger: CCTCGCTGGCAAGCCCCACCACACAGGAGTGAGGCC...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGACCGGAGCGTCTCCGGTaGGGTCCATCGCGGGCAACG +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRPERLR*GPSRAT
Trigger: CGTTGCCCGCGATGGACCGCACCGGAGACGCTCCGG...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTTGGTGCCCCGCGGGATaGGTGGGTCGCGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTWCPAG*VGRGRL
Trigger: GAGACGCCCGCGACCCACGCATCCCGCGGGGCACCA...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCAGCGCAGGGCCAGGTTaGGCTGCATGGTGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGSAGPG*AAWCPA
Trigger: CGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCT...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGGCCGACCACCTTCCCTaGCCCGTTCACCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEADHLP*PVHPWG
Trigger: GCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGC...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAATCTCCCTCCCGCCCTaGATCACTGCAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTISLPP*ITAGPV
Trigger: CACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGAT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACATCTGGGGAGGTGCGCTaGAGCACCAGCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTSGEVR*STSLAG
Trigger: ACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACTCACTCCTGTGTGGTaGGGCTTGCCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTLTPVW*GLPARE
Trigger: CTCCCTCGCTGGCAAGCCCCACCACACAGGAGTGAG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGGAGCAGAGCGCTCGTaGTGCCCGTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRGAERS*CPWAAL
Trigger: GAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTCCGGAGCGTCTCCGGTaGGGTCCATCGCGGGCAACG +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTPERLR*GPSRAT
Trigger: CGTTGCCCGCGATGGACCGCACCGGAGACGCTCCGG...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAGTGTGGGCGCCCACTaGACCTGCTCCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGESVGAH*TCSCSP
Trigger: GGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACT...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCACCGCCTTGCCCACTaGCCACCATGGGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLHRLAH*PPWAHS
Trigger: GGAGTGAGCCCATGGTGGGCAGTGGGCAAGGCGGTG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGGCAGAGTCCCCGAGGTaGCGGCGGATGCGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGAESPR*RRMRRC
Trigger: GCACCGGCGCATCCGCCGCCACCTCGGGGACTCTGC...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312527.9
CDS-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGCCTAGACCGCTGCCCTaGGCCGCGTGCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREPRPLP*AACGSL
Trigger: GAGGGAGCCGCACGCGGCCCAGGGCAGCGGTCTAGG...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGACGTGCAGTACTCCCTaGGGTCGGCGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDRETCSTP*GRRRAA
Trigger: CGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGT...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGGCGTCACCACGTGGATaGTGGGCAGCGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLASPRG*WAACRT
Trigger: GGTCCGACACGCTGCCCACCATCCACGTGGTGACGC...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGACCAGGTTGCGCTGCATaGTGCCCCGCGGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRPGCAA*CPAGCV
Trigger: CACGCATCCCGCGGGGCACCATGCAGCGCAACCTGG...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAGTTCTGGCATCAGGCTaGGCTCTCTCAGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTVLASG*ALSEAP
Trigger: GGGGGCTTCTGAGAGAGCCCAGCCTGATGCCAGAAC...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGATACCGCGAGCAGGGGTaGGAGGGTGCTCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRYREQG*EGALVP
Trigger: TGGCACCAGAGCACCCTCGCACCCCTGCTCGCGGTA...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTAGGGCCAGGTTGCGCTaGATGGTGCCCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTRARLR*MVPRGM
Trigger: CATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCT...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGACGGCATCTCCAAGGCTaGCTGCACCCACGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRRHLQG*LHPRLL
Trigger: GAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCG...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGTCCACCACCAGCCAGTaGAGGTTGGGCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLSTTSQ*RLGTCS
Trigger: GCTGCACGTGCCCAACCTCCACTGGCTGGTGGTGGA...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCCCAGGTTGCGCTGCATaGTGCCCCGCGGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLPGCAA*CPAGCV
Trigger: CACGCATCCCGCGGGGCACCATGCAGCGCAACCTGG...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCCCACGCCAGGCTGGCTaGAGTTGCGCGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGPRQAG*SCAGRS
Trigger: AGACCTTCCCGCGCAACTCCAGCCAGCCTGGCGTGG...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCAGAGCCCTTTCCAGTaGGCCCCAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEQSPFQ*APEAWG
Trigger: TCCCCAGGCCTCTGGGGCCCACTGGAAAGGGCTCTG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCACTAGAGAGCCCGGCTaGGCCAGGGGGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLTREPG*ARGSEP
Trigger: GGGCTCTGACCCCCTGGCCCAGCCGGGCTCTCTAGT...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTACTAGAGAGCCCGGCTaGGCCAGGGGGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTTREPG*ARGSEP
Trigger: GGGCTCTGACCCCCTGGCCCAGCCGGGCTCTCTAGT...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCTCACTCCTGTGTGGTaGGGCTTGCCAGCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLLTPVW*GLPARE
Trigger: CTCCCTCGCTGGCAAGCCCCACCACACAGGAGTGAG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAAGAACTCCTAGCCCCTaGCCTCACTCCTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTRTPSP*PHSCVV
Trigger: CACCACACAGGAGTGAGGCCAGGGGCTAGGAGTTCT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTGCAGGTGCGTGTAGTTaGGGCCGGTGTCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTAGACS*GRCRAA
Trigger: TGCTGCGCGACACCGGCCTCAACTACACGCACCTGC...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCCCTGTGTGGTCGTGCTaGGCCCAGGGACAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTPVWSC*AQGQGA
Trigger: GGCTCCCTGTCCCTGGGCTCAGCACGACCACACAGG...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCGCGTCGGGGGTCACTaGCCTCATCCTTATGTACCG +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLRVGGH*PHPYVP
Trigger: CGGTACATAAGGATGAGGGCAGTGACCCCCGACGCG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGGGTTGCGCTGCATGGTaGCCCGCGGGATGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGGCAAW*PAGCVG
Trigger: ACCCACGCATCCCGCGGGGCACCATGCAGCGCAACC...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAACACCAGGATCTTGGTaGAGTTGGCTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTTPGSW*SWLPWA
Trigger: AGCCCAAGGCAGCCAACTGCACCAAGATCCTGGTGT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCTCCTCTTTCCAGGCTaGAGGAGGTCCCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLLLFPG*RRSHLA
Trigger: GGCAAGGTGGGACCTCCTGCAGCCTGGAAAGAGGAG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGAGAGTCCGGCCCAACTaGAGTCTGAGAAGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLRVRPN*SLRRGR
Trigger: GCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCT...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGGGTGCGAGGGTGCTCTaGTGCCAGACAGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLGARVL*CQTVMS
Trigger: GCTCATCACTGTCTGGCACCAGAGCACCCTCGCACC...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCCAGCGTGTCGGACCATaGCGGGGGCCGCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALQRVGP*RGPRVH
Trigger: GTGTACACGCGGCCCCCGCCATGGTCCGACACGCTG...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCTCCACCACCAGCCAGTaGAGGTTGGGCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGSTTSQ*RLGTCS
Trigger: GCTGCACGTGCCCAACCTCCACTGGCTGGTGGTGGA...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACCTGGTCACGCTGGATaGAGAGAACAACAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTPGHAG*REQQVW
Trigger: CCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCTGGAGCACCAGCTTaGCTGGTGCTGGACACCCCA +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRAGAPA*LVLDTP
Trigger: TGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCCACCGAGGGGTCAGTaGAGCCCTTCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEPPRGQ*SPSCPH
Trigger: ATGAGGGCAAGAAGGGCTTCACTGACCCCTCGGTGG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCCAAGAACAGGGTCTaGGGAGGAGGCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRAKNRV*GGGSCI
Trigger: GATGCAGGAGCCTCCTCCTCAGACCCTGTTCTTGGC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGTCCAGGTCAGGCAGTaGCCTGTGCTGGCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRVQVRQ*PVLALE
Trigger: CTCTAGAGCCAGCACAGGTCACTGCCTGACCTGGAC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGATGGAGGTTGGGCACGTaGAGCAGCGTGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRWRLGT*SSVLAM
Trigger: CATGGCCAACACGCTGCTGCACGTGCCCAACCTCCA...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCAGGGCCAGGTTGCGCTaGATGGTGCCCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVRARLR*MVPRGM
Trigger: CATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCT...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGAGCGCAGGGCCAGGTTaGGCTGCATGGTGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQSAGPG*AAWCPA
Trigger: CGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCT...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGCCGACCACCTTCCCTaGCCCGTTCACCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIADHLP*PVHPWG
Trigger: GCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTGGCGCCCACTGCACCTaGTCCTGCAGCCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCAGAHCT*SCSPVS
Trigger: ACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCC...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCGGCGCCCACTGCACCTaGTCCTGCAGCCCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVGAHCT*SCSPVS
Trigger: ACTGACGGGGCTGCAGGAGCAGGTGCAGTGGGCGCC...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCCACCGCCTTGCCCACTaGCCACCATGGGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTHRLAH*PPWAHS
Trigger: GGAGTGAGCCCATGGTGGGCAGTGGGCAAGGCGGTG...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCAGAAAAGAACAGGCATaGGCCGGGCCGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGRKEQA*AGPARH
Trigger: ATGCCTGGCCGGCCCGGCCCATGCCTGTTCTTTTCT...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312527.9
CDS-3UTR CCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCCAGCGTGTCGGACCATaGCGGGGGCCGCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVQRVGP*RGPRVH
Trigger: GTGTACACGCGGCCCCCGCCATGGTCCGACACGCTG...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCCGTGGGGAGAGGATaGAAGGCCAAGAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRAVGRG*KAKNRV
Trigger: GACCCTGTTCTTGGCCTTCCATCCTCTCCCCACGGC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGTTCTGGCATCAGGCTaGGCTCTCTCAGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGVLASG*ALSEAP
Trigger: GGGGGCTTCTGAGAGAGCCCAGCCTGATGCCAGAAC...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGCTGGACACCCCACCCTaGCCATCAGGTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDRELDTPP*PSGLSG
Trigger: GCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAG...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTGAGCACCAGCTTGGCTaGTGCTGGACACCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTEHQLG*CWTPHP
Trigger: AGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTC...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTTCTGGGGAGGTGCGCTaGAGCACCAGCTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTSGEVR*STSLAG
Trigger: ACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGACTGCAGGGCCAGTGTaGGCGCCCACTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGTAGPV*APTAPA
Trigger: AGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCCGTGGGCTGCTCTCTaGTCTTCAGAATTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLPWAAL*SSEFPG
Trigger: GCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAACCTCTTCAGTAGGCTaGGGCCCTTTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTTSSVG*GPFLFL
Trigger: GAGGAAAAGGAAAGGGCCCCAGCCTACTGAAGAGGT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGATCACACCTCGCAGCTTaGAGTAGGCCTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRSHLAA*SRPGFA
Trigger: AGCGAAGCCAGGCCTACTTCAAGCTGCGAGGTGTGA...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGGGCCATGCTCCACTTaGCTGCGGGGTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGGPCST*LRGLLI
Trigger: GATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCC...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCCTGTGTGGTCGTGCTaGGCCCAGGGACAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPPVWSC*AQGQGA
Trigger: GGCTCCCTGTCCCTGGGCTCAGCACGACCACACAGG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCGCTCCCGCCACAGCCTaGGGTACAGGGGGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVAPATA*GTGGAY
Trigger: ATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGC...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGGTTGCGCTGCATGGTaGCCCGCGGGATGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIGCAAW*PAGCVG
Trigger: ACCCACGCATCCCGCGGGGCACCATGCAGCGCAACC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCCTTGGTGCAGTTGGCTaGCTTGGGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGLGAVG*LGLQVV
Trigger: AACGACCTGGAGCCCAAGGCAGCCAACTGCACCAAG...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGAGTGTGGGCGCCCACTaGACCTGCTCCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQSVGAH*TCSCSP
Trigger: GGGGCTGCAGGAGCAGGTGCAGTGGGCGCCCACACT...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGACCATGCAGGGCTGGGTaGCTGTTGGGATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRPCRAG*LLGSKT
Trigger: TGTCTTGGATCCCAACAGGCACCCAGCCCTGCATGG...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCCTGTGTGGTGGGGCTTaGCAGCGAGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTLCGGA*QRGSRE
Trigger: TTCCCTGCTCCCTCGCTGGCAAGCCCCACCACACAG...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACCGGGTGGGCTGCACCTaGCCCCAGCTCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDRVGCT*PQLWAP
Trigger: TGGGGCCCAGAGCTGGGGGCAGGTGCAGCCCACCCG...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGGCCACTGCTGGGGCTaGATGGGGCTGCGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAGHCWG*MGLRVK
Trigger: CTTGACACGCAGCCCCATGCAGCCCCAGCAGTGGCC...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCGGCATCTCCAAGGCTaGCTGCACCCACGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDARHLQG*LHPRLL
Trigger: GAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCG...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCACGTGCAGTACTCCCTaGGGTCGGCGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSTCSTP*GRRRAA
Trigger: CGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGT...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAACGTGCAGTACTCCCTaGGGTCGGCGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGTCSTP*GRRRAA
Trigger: CGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGT...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCTCACCACGTGGATGGTaGGCAGCGTGTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLSPRGW*AACRTM
Trigger: CATGGTCCGACACGCTGCCCACCATCCACGTGGTGA...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGTGGGCGTCACCACGTaGATGGTGGGCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAVGVTT*MVGSVS
Trigger: CGACACGCTGCCCACCATCCACGTGGTGACGCCCAC...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCCCAGCCAGTGGAGGTTaGGCACGTGCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTPASGG*ARAAAC
Trigger: ACACGCTGCTGCACGTGCCCAACCTCCACTGGCTGG...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAACACGGACACCCTCCTaGTGCTGCGCATCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRTRTPS*CCASLR
Trigger: TCGAAGAGATGCGCAGCACCAGGAGGGTGTCCGTGT...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACACATGTCTATTGCAAATaGCCGGTGGGGGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTHVYCK*PVGVKH
Trigger: GTGTTTGACCCCCACCGGCCATTTGCAATAGACATG...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCAGGGACCATCAGCCGTaGGGAGAGGATGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLRDHQP*GEDGRP
Trigger: TGGCCTTCCATCCTCTCCCCACGGCTGATGGTCCCT...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCCTTAGGAGTCGGCCTTaGAGGGACCATCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLLRSRP*RDHQPW
Trigger: CCACGGCTGATGGTCCCTCCAAGGCCGACTCCTAAG...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTAGGTCTCTCGGGCCCTaGTCACGCTGGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTRSLGP*SRWMER
Trigger: TCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCT...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCGCTGGAGCACCAGCTTaGCTGGTGCTGGACACCCCA +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTAGAPA*LVLDTP
Trigger: TGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGC...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCGCCCACTGCCCACCATaGGCTCACTCCACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVAHCPP*AHSTLR
Trigger: CCTCAGGGTGGAGTGAGCCCATGGTGGGCAGTGGGC...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAAAACGTCCTGCAAGGTaGCTCAGGGATCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTKRPAR*LRDLIP
Trigger: TGGAATCAGATCCCTGAGCCACCTTGCAGGACGTTT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCAGAACTCCTAGCCCCTaGCCTCACTCCTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGRTPSP*PHSCVV
Trigger: CACCACACAGGAGTGAGGCCAGGGGCTAGGAGTTCT...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCGGCCCAACTGGAGTCTaGGAAGGGGTCGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVGPTGV*EGVAVQ
Trigger: CTGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCC...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGTGTACACGTACTCGGTaGGCACCACCTCCACGATGT +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGECTRTR*APPPRC
Trigger: ACATCGTGGAGGTGGTGCGCACCGAGTACGTGTACA...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGCAGGCTGGCTGGAGTTaGGCGGGAAGGTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQQAGWS*AGRSRA
Trigger: TGCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTG...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCACACCCTCCTGGTGCTaGGCATCTCTTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGTPSWC*ASLRRA
Trigger: AGCTCTTCGAAGAGATGCGCAGCACCAGGAGGGTGT...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCCGGACACCCTCCTGGTaGTGCGCATCTCTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLRTPSW*CASLRR
Trigger: TCTTCGAAGAGATGCGCAGCACCAGGAGGGTGTCCG...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGACCACCTTCCCTaGCCCGTTCACCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDADHLP*PVHPWG
Trigger: GCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTCTTGGTGCAGTTGGCTaGCTTGGGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTLGAVG*LGLQVV
Trigger: AACGACCTGGAGCCCAAGGCAGCCAACTGCACCAAG...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCCCGCCCTGCATCACTaGAGGGCCAGTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDPALHH*RASVGA
Trigger: GGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAATTGTGCTTCCAACTTaGAGGAGAATGAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTIVLPT*RRMSRI
Trigger: GATCCGGCTCATTCTCCTGCAAGTTGGAAGCACAAT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCCTCCCTTCTCTCCCATaGCACCCCACTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AGSSYLPPALHHCRASVGLPSLP*HPTCFQ
Trigger: TTGGAAGCAAGTGGGGTGGCATGGGAGAGAAGGGAG...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGCAGCGGGTGGGCTaGACCTGCCCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGRQRVG*TCPQLW
Trigger: CCAGAGCTGGGGGCAGGTGCAGCCCACCCGCTGCCT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGGGTGCGAGGGTGCTCTaGTGCCAGACAGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREGARVL*CQTVMS
Trigger: GCTCATCACTGTCTGGCACCAGAGCACCCTCGCACC...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCCCAGCCAGTGGAGGTTaGGCACGTGCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVPASGG*ARAAAC
Trigger: ACACGCTGCTGCACGTGCCCAACCTCCACTGGCTGG...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGATGCCCCGTTCACCCGTaGGGCCTCGTACCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGCPVHP*GLVPQA
Trigger: GGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCA...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGCCCACTGCCCACCATaGGCTCACTCCACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQAHCPP*AHSTLR
Trigger: CCTCAGGGTGGAGTGAGCCCATGGTGGGCAGTGGGC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCAGAGCCCTTTCCAGTaGGCCCCAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPQSPFQ*APEAWG
Trigger: TCCCCAGGCCTCTGGGGCCCACTGGAAAGGGCTCTG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGAGGCTGGGCCTGGCTaGGGCTTCAGAAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALEAGPG*GFRNVQ
Trigger: CTGGACATTTCTGAAGCCCCAGCCAGGCCCAGCCTC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGGCCCAACTGGAGTCTaGGAAGGGGTCGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPGPTGV*EGVAVQ
Trigger: CTGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGTCACACCTCGCAGCTTaGAGTAGGCCTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGSHLAA*SRPGFA
Trigger: AGCGAAGCCAGGCCTACTTCAAGCTGCGAGGTGTGA...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGCCACAGAGGTATGTCTaGTTTGGGGGCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREPQRYV*FGGSSR
Trigger: CCGAGAGCTGCCCCCAAATCAGACATACCTCTGTGG...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCCTTGGCTGGCTTCTGTaGGGCAGTAGAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTLGWLL*GSRVPT
Trigger: TGTGGGCACTCTACTGCCTCACAGAAGCCAGCCAAG...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCCGCGTCGGGGGTCACTaGCCTCATCCTTATGTACCG +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVRVGGH*PHPYVP
Trigger: CGGTACATAAGGATGAGGGCAGTGACCCCCGACGCG...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGCGCGCAGCTTGTAGTTaGGGGGCGTCTCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQRAACS*GASPRA
Trigger: TGCACGTGGAGACGCCCCGCAACTACAAGCTGCGCG...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTTGGTGCCCCGCGGGATaGGTGGGTCGCGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGWCPAG*VGRGRL
Trigger: GAGACGCCCGCGACCCACGCATCCCGCGGGGCACCA...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGTTGCGCTGCATGGTaGCCCGCGGGATGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVGCAAW*PAGCVG
Trigger: ACCCACGCATCCCGCGGGGCACCATGCAGCGCAACC...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAAGGGCCAGGTTGCGCTaGATGGTGCCCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGRARLR*MVPRGM
Trigger: CATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCT...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGAGCGCAGGGCCAGGTTaGGCTGCATGGTGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWSAGPG*AAWCPA
Trigger: CGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCT...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCCGGACACCCTCCTGGTaGTGCGCATCTCTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALRTPSW*CASLRR
Trigger: TCTTCGAAGAGATGCGCAGCACCAGGAGGGTGTCCG...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGATTCTCTGTCCGTGTGTaGCACACCAGGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRFSVRV*HTRILV
Trigger: CACCAAGATCCTGGTGTGGCACACACGGACAGAGAA...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCTACCCCTTTGCCACTaGTGGAGGAGAAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGELPLCH*WRRRGK
Trigger: TTTACCCCTTCTCCTCCAGCAGTGGCAAAGGGGTAG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACCTGCCCTCCCCGGGTaGCCTCAGAGCCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIPALPG*PQSLRG
Trigger: CCCTCTGAGGCTCTGAGGGCACCCGGGGAGGGCAGG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCAAGGGTGCCGTGGGGTaGCTTCTGCTCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAKGAVG*LLLPSS
Trigger: ACTGGATGGGAGCAGAAGGCACCCCACGGCACCCTT...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACCACACCCAGGCCACTaGTGGGGCTGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGPHPGH*WGCMGL
Trigger: CAGCCCCATGCAGCCCCAGCAGTGGCCTGGGTGTGG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGAACCCCACACGGGATaGCTGCTGGGTCTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAEPHTG*LLGLVV
Trigger: GACCACAAGACCCAGCAGGCATCCCGTGTGGGGTTC...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGCCCCAGCTCACGTGTaGTCACCATTTCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALAPAHV*SPFQAE
Trigger: CTCTGCCTGAAATGGTGAGCACACGTGAGCTGGGGC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAGGGGGCCATGCTGCCTaGTCCTGCCCCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGGGHAA*SCPSSR
Trigger: ACGTGAGCTGGGGCAGGAGCAGGCAGCATGGCCCCC...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGCTCACCTGGGGGCCATaGTGCCTGCTCCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVLTWGP*CLLLPQ
Trigger: CTGGGGCAGGAGCAGGCAGCATGGCCCCCAGGTGAG...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCTTGCGGAAGCAGGTTTaGAGAGTCCGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALLRKQV*RVRPNW
Trigger: CCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAA...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCAGCGTGTCGGACCATaGCGGGGGCCGCGTGTACAC +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSQRVGP*RGPRVH
Trigger: GTGTACACGCGGCCCCCGCCATGGTCCGACACGCTG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGGCCACACCAGGATCTTaGTGCAGTTGGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGATPGS*CSWLPW
Trigger: CCAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGC...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTAGGGACCATCAGCCGTaGGGAGAGGATGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCARDHQP*GEDGRP
Trigger: TGGCCTTCCATCCTCTCCCCACGGCTGATGGTCCCT...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCGGGCCCTGGTCACGCTaGATGGAGAGAACAACAGGT +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTGPWSR*MERTTG
Trigger: ACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCC...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCAGCTTGGCTGGTGCTaGACACCCCACCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPQLGWC*TPHPGH
Trigger: ATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCAGCTTGGCTGGTGCTaGACACCCCACCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIQLGWC*TPHPGH
Trigger: ATGGCCAGGGTGGGGTGTCCAGCACCAGCCAAGCTG...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCAGTGCGGGGAGCTCTaGGGAGGTGCGCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPQCGEL*GGALEH
Trigger: GTGCTCCAGCGCACCTCCCCAGAGCTCCCCGCACTG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCGGAGTGGGTTCTGAATaGCCCTCAGACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTGVGSE*PSDLSW
Trigger: CCAGGAGAGGTCTGAGGGCCATTCAGAACCCACTCC...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGGGAGGGTGGCGGCCTaGACGTGTCCGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDGRVAA*TCPAGA
Trigger: AGCACCTGCCGGACACGTCCAGGCCGCCACCCTCCC...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACATGGGAGTGGGAGGGTaGCGGCCTGGACGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDMGVGG*RPGRVR
Trigger: CCGGACACGTCCAGGCCGCCACCCTCCCACTCCCAT...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAGGCAGCACATGGGAGTaGGAGGGTGGCGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGGSTWE*EGGGLD
Trigger: GTCCAGGCCGCCACCCTCCCACTCCCATGTGCTGCC...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCTGGAGAACGCCAGCTaGCCGGCAGGGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDLENAS*PAGGRS
Trigger: CGACCTGCCCCCTGCCGGCCAGCTGGCGTTCTCCAG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGAGAGCCCCCAGCCTaGAGAACGCCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGREPPA*RTPAGR
Trigger: CCGGCCAGCTGGCGTTCTCCAGGCTGGGGGCTCTCT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGGGCCAGGCGCAGGGTaGGTAAGGGGCACACACAGG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGGPGAG*VRGTHR
Trigger: CCTGTGTGTGCCCCTTACCCACCCTGCGCCTGGCCC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTTCCAGGGCAGCACGATaGGGACGATCGCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCASRAAR*GRSLGC
Trigger: ACATCCTAGCGATCGTCCTCATCGTGCTGCCCTGGA...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGAGGCTCCTGCATCCTaGGGCTCAGATCTCCACCGA +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIEAPAS*GSDLHR
Trigger: TCGGTGGAGATCTGAGCCTCAGGATGCAGGAGCCTC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTGTGGACAGCTGGACATaGGGTGGGCTAGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCAVDSWT*GGLALH
Trigger: ATGCAGAGCTAGCCCACCTCATGTCCAGCTGTCCAC...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTGGTGGCTCAGGGATCTaGTTCCATCAGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTGGSGI*FHQMVS
Trigger: TGAGACCATCTGATGGAATCAGATCCCTGAGCCACC...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTCTACCCCTTTGCCACTaGTGGAGGAGAAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTLPLCH*WRRRGK
Trigger: TTTACCCCTTCTCCTCCAGCAGTGGCAAAGGGGTAG...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGCAAAAGGCTGTGCCCTaGCCTCCCCGGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVQKAVP*PPRVPS
Trigger: TGAGGGCACCCGGGGAGGGCAGGGCACAGCCTTTTG...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATGTGGGCGTCACCACGTaGATGGTGGGCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDVGVTT*MVGSVS
Trigger: CGACACGCTGCCCACCATCCACGTGGTGACGCCCAC...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCGTGCAGCAGCGTGTTaGCCATGCGCGTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPRAAAC*PCASAR
Trigger: CCGAGCTGACGCGCATGGCCAACACGCTGCTGCACG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACCGTGCAGCAGCGTGTTaGCCATGCGCGTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDRAAAC*PCASAR
Trigger: CCGAGCTGACGCGCATGGCCAACACGCTGCTGCACG...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCCACGCCAGGCTGGCTaGAGTTGCGCGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDPRQAG*SCAGRS
Trigger: AGACCTTCCCGCGCAACTCCAGCCAGCCTGGCGTGG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTGAGGTATGTCTGATTTaGGGGCAGCTCTCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLISLPPCITAGPVWAPTEVCLI*GQLSGR
Trigger: TCTTCCCGAGAGCTGCCCCCAAATCAGACATACCTC...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGGTTCTTTCTCCAGGATaGAAAGTGGACAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLVLSPG*KVDSWT
Trigger: TGTCCAGCTGTCCACTTTCCATCCTGGAGAAAGAAC...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGATTTTGGCTAAGAAGGTaGCCTCAGACCAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRFWLRR*PQTSQA
Trigger: AGCTTGGCTGGTCTGAGGCCACCTTCTTAGCCAAAA...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGCCCTAGCACCTGCTTaGAGGCTGAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAALAPA*RLKQEG
Trigger: TCCTTCCTGCTTCAGCCTCCAAGCAGGTGCTAGGGC...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTTGCAGCAGGGACCCGTaGGGGTGGTGGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGCSRDP*GWWGGQ
Trigger: CTGCCCTCCCCACCACCCCCACGGGTCCCTGCTGCA...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTCGGCTCCTCATTACCTaGGTGGCGGTAAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCARLLIT*VAVSSG
Trigger: TCCTGAACTTACCGCCACTCAGGTAATGAGGAGCCG...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312527.9
CDS-3UTR TCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGCAGGTGCGTGTAGTTaGGGCCGGTGTCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIAGACS*GRCRAA
Trigger: TGCTGCGCGACACCGGCCTCAACTACACGCACCTGC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGGGCCATGCTCCACTTaGCTGCGGGGTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQGPCST*LRGLLI
Trigger: GATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCCACAGAGGTATGTCTaGTTTGGGGGCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPPQRYV*FGGSSR
Trigger: CCGAGAGCTGCCCCCAAATCAGACATACCTCTGTGG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGCAACTTGCAGGAGAATaGGCCGGATCACCACTAGAG +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREQLAGE*AGSPLE
Trigger: CTCTAGTGGTGATCCGGCTCATTCTCCTGCAAGTTG...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGTTAGGTGAAAACAACTaGCCTAGCATCTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLLGENN*PSICPK
Trigger: CTTTGGGCAGATGCTAGGTCAGTTGTTTTCACCTAA...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGCAGGTCGTGGGATGTaGTGCCTGGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGAGRGM*CLGWAG
Trigger: CCCTGCCCAGCCCAGGCATCACATCCCACGACCTGC...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCTGAGCACCATGCATaGTGCAGCAGGGACCCGTGG +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDAEHHA*CSRDPW
Trigger: CCACGGGTCCCTGCTGCATCATGCATGGTGCTCAGC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGGAAGGGGACTGTGGTaGCGACGCCCTCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLGRGLW*RRPPLL
Trigger: CAGGAGTGGAGGGCGTCGTCACCACAGTCCCCTTCC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTCACAACCCACCCATTaGGGAAGCAGGTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTSQPTH*GSRFGE
Trigger: CTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGA...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATGTCGCGGTCAGACGTaGAGTACTCCCTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGCRGQT*STPWGR
Trigger: CCGACCCCAGGGAGTACTGCACGTCTGACCGCGACA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGCAGCGTGTTGGCCATaGGCGTCAGCTCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSAACWP*ASARPS
Trigger: AGAAGGCCGAGCTGACGCGCATGGCCAACACGCTGC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGCAGCGTGTTGGCCATaGGCGTCAGCTCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVAACWP*ASARPS
Trigger: AGAAGGCCGAGCTGACGCGCATGGCCAACACGCTGC...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCGCGCAGCTTGTAGTTaGGGGGCGTCTCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDRAACS*GASPRA
Trigger: TGCACGTGGAGACGCCCCGCAACTACAAGCTGCGCG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCATCTCCCTCCCGCCCTaGATCACTGCAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSISLPP*ITAGPV
Trigger: CACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGAT...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGCTTTCCCAGCCCCTCTaGTACTCCAGAGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQLSQPL*YSRVPP
Trigger: AGGAGGGACTCTGGAGTAGCAGAGGGGCTGGGAAAG...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACCTCTCGCAGCCTGCTaGTTCTGCCTGGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGPLAAC*FCLGLG
Trigger: TCCAAGCCCCAGGCAGAAGCAGCAGGCTGCGAGAGG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCACCCGTCCCAGTaGCCAGTGTTGGATACGGAC +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDAHPSQ*PVLDTD
Trigger: GTCCGTATCCAACACTGGGCACTGGGACGGGTGGGC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGCGTCACCACGTGGATaGTGGGCAGCGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIASPRG*WAACRT
Trigger: GGTCCGACACGCTGCCCACCATCCACGTGGTGACGC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCCAGGTTGCGCTGCATaGTGCCCCGCGGGATGCGTG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGPGCAA*CPAGCV
Trigger: CACGCATCCCGCGGGGCACCATGCAGCGCAACCTGG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCCACGCCAGGCTGGCTaGAGTTGCGCGGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDPRQAG*SCAGRS
Trigger: AGACCTTCCCGCGCAACTCCAGCCAGCCTGGCGTGG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTACACGGACACCCTCCTaGTGCTGCGCATCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRITRTPS*CCASLR
Trigger: TCGAAGAGATGCGCAGCACCAGGAGGGTGTCCGTGT...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGATTGCAAATGGCCGGTaGGGGTCAAACACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGIANGR*GSNTVF
Trigger: GAAGACGGTGTTTGACCCCCACCGGCCATTTGCAAT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGGATCTTGGTGCAGTTaGCTGCCTTGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIGSWCS*LPWAPG
Trigger: ACCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTTCAGAATTCCCTGGCTaGGTGTCCTGTGTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCASEFPG*VSCVVV
Trigger: CACGACCACACAGGACACCCAGCCAGGGAATTCTGA...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGAGGGAGTTAGGGAATaGCCTTGGCCTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPEGVRE*PWPPSS
Trigger: AGAGGAGGGAGGCCAAGGCCATTCCCTAACTCCCTC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGTTCTTTCTCCAGGATaGAAAGTGGACAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRVLSPG*KVDSWT
Trigger: TGTCCAGCTGTCCACTTTCCATCCTGGAGAAAGAAC...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGACCTCTTCAGTAGGCTaGGGCCCTTTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGTSSVG*GPFLFL
Trigger: GAGGAAAAGGAAAGGGCCCCAGCCTACTGAAGAGGT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCACCCACTCAGGAGTaGGTTCTGAATGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIPPTQE*VLNGPQ
Trigger: CTGAGGGCCATTCAGAACCCACTCCTGAGTGGGTGG...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACACAAGGGGGACTTCGTaGAGAGGCAGGACGCGGCGT +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDTRGTS*RGRTRR
Trigger: ACGCCGCGTCCTGCCTCTCCACGAAGTCCCCCTTGT...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGGTGCAGGAGTGGCTTaGCCACACCCAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLGAGVA*PHPGEP
Trigger: GGGCTCTCCTGGGTGTGGCCAAGCCACTCCTGCACC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACACCCTCCTCTGCAATaGCTGCCCCCACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIHPPLQ*LPPLQG
Trigger: GCCCTGCAGTGGGGGCAGCCATTGCAGAGGAGGGTG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAGGACAGTACCTCACCTaGGGGCCATGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGGQYLT*GPCCLL
Trigger: GAGCAGGCAGCATGGCCCCCAGGTGAGGTACTGTCC...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGGATGCCAGCAAGGCTaGGCCCTGCTCTGGGACACA +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGGCQQG*ALLWDT
Trigger: TGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAAGGGGTCAGGAACCCTaGGGGGTGGACACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGRGQEP*GVDTCK
Trigger: CTTGCAGGTGTCCACCCCCCAGGGTTCCTGACCCCT...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCCACCGAGGGGTCAGTaGAGCCCTTCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPPPRGQ*SPSCPH
Trigger: ATGAGGGCAAGAAGGGCTTCACTGACCCCTCGGTGG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGCCAAGAACAGGGTCTaGGGAGGAGGCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSAKNRV*GGGSCI
Trigger: GATGCAGGAGCCTCCTCCTCAGACCCTGTTCTTGGC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCGGTGGCTCAGGGATCTaGTTCCATCAGATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVGGSGI*FHQMVS
Trigger: TGAGACCATCTGATGGAATCAGATCCCTGAGCCACC...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGGCTTGGTTTCCAAAGTaGCATCCAGGGTGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SARDARGLLSGLQNSLAGAWFPK*HPGCKR
Trigger: CCTCTTACACCCTGGATGTCACTTTGGAAACCAAGC...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACAGGGGCTGCCACATTaGGGGGAGACAGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGQGLPH*GETVLQ
Trigger: TTGGAGGACTGTCTCCCCTCAATGTGGCAGCCCCTG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTTCACAACCCACCCATTaGGGAAGCAGGTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCASQPTH*GSRFGE
Trigger: CTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGA...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACCGCGTCGGGGGTCACTaGCCTCATCCTTATGTACCG +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDRVGGH*PHPYVP
Trigger: CGGTACATAAGGATGAGGGCAGTGACCCCCGACGCG...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATTGTCGCGGTCAGACGTaGAGTACTCCCTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHCRGQT*STPWGR
Trigger: CCGACCCCAGGGAGTACTGCACGTCTGACCGCGACA...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCTGGAGGTTGGGCACGTaGAGCAGCGTGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSWRLGT*SSVLAM
Trigger: CATGGCCAACACGCTGCTGCACGTGCCCAACCTCCA...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTTCCAGCCATGTCTATTaGAAATGGCCGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRISSHVY*KWPVGV
Trigger: GACCCCCACCGGCCATTTGCAATAGACATGGCTGGA...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCTCCCTTCTCTCCCATaGCACCCCACTTGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPLPSLP*HPTCFQ
Trigger: TTGGAAGCAAGTGGGGTGGCATGGGAGAGAAGGGAG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCTTAAAACAGACCAGATaGAGCTGCCTGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVLKQTR*SCLGAT
Trigger: GGTGGCACCCAGGCAGCTGCATCTGGTCTGTTTTAA...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGAGTCTGAGACGGGGCTaGAAGGTTGGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVSLRRG*KVGQHW
Trigger: CCAGTGCTGGCCAACCTTGCAGCCCCGTCTCAGACT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGCCTGTGGGCAAGGGTaGCGTGGGGTGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGACGQG*RGVPSA
Trigger: AGCAGAAGGCACCCCACGGCACCCTTGCCCACAGGC...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGACAGGGCCCTAGCACCTaGTTGGAGGCTGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGQGPST*LEAEAG
Trigger: TCCTGCTTCAGCCTCCAAGCAGGTGCTAGGGCCCTG...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGAATGGCTGCCCCCACTaGAGGGCCCTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLNGCPH*RALAPA
Trigger: AGCAGGTGCTAGGGCCCTGCAGTGGGGGCAGCCATT...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCATAATGGCCTCCAGCTaGATCCAGGCTGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAIMASS*IQAAAK
Trigger: CTTTGCAGCAGCCTGGATGCAGCTGGAGGCCATTAT...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCCTCCTCATTACCCATTaGGGAAGCAGGTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALLLITH*GSRFGE
Trigger: CTCTCCAAACCTGCTTCCGCAATGGGTAATGAGGAG...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCAGAGCAGCTGAATGTTaGCTAGCAGGTCTTACCAGC +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTRAAEC*LAGLTS
Trigger: GCTGGTAAGACCTGCTAGCCAACATTCAGCTGCTCT...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312527.9
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCTTAGGAGTCGGCCTTaGAGGGACCATCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSLRSRP*RDHQPW
Trigger: CCACGGCTGATGGTCCCTCCAAGGCCGACTCCTAAG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCCTGGTCACGCTGGATaGAGAGAACAACAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPPGHAG*REQQVW
Trigger: CCAGACCTGTTGTTCTCTCCATCCAGCGTGACCAGG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGGGCTGGGTGCCTGTTaGGATCCAAGACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQGLGAC*DPRQPY
Trigger: ATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGTTAGGGAATGGCCTTaGCCTCCCTCCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPVREWP*PPSSFQ
Trigger: CTGGAAAGAGGAGGGAGGCCAAGGCCATTCCCTAAC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCGAGCAGGGAACAGACTaGGTTTGGAAAACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTEQGTD*VWKTVV
Trigger: GACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTC...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGGAGCAGGGAACAGACTaGGTTTGGAAAACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RIPWLGVLCGRAEPRDREEQGTD*VWKTVV
Trigger: GACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTC...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATGGGAGAGTGGAGGGTaGTTCCCAGATGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGWESGG*FPDGEQ
Trigger: CTGCTCCCCATCTGGGAACCACCCTCCACTCTCCCA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGCAGGACGCGGCGTaGGCAGTGTGTGTGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGRQDAA*AVCVSV
Trigger: TACACTCACACACACTGCCCACGCCGCGTCCTGCCT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGAAGGTTGGCCAGCACTaGTCCCCTCTCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLKVGQH*SPLAAC
Trigger: GCAGGCTGCGAGAGGGGACCAGTGCTGGCCAACCTT...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATATGGGCAAGGGTGCCGTaGGGTGCCTTCTGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIWARVP*GAFCSH
Trigger: ATGGGAGCAGAAGGCACCCCACGGCACCCTTGCCCA...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGAAGAGAGGGGAGGATaGGGCCTGTGGGCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDEERGG*GLWARV
Trigger: CACCCTTGCCCACAGGCCCCATCCTCCCCTCTCTTC...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCAAGCCTCTCGAACCTaGGCCAGGCGCAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGQASRT*ARRRVG
Trigger: ACCCACCCTGCGCCTGGCCCAGGTTCGAGAGGCTTG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCACACCTCGCAGCTTaGAGTAGGCCTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSHLAA*SRPGFA
Trigger: AGCGAAGCCAGGCCTACTTCAAGCTGCGAGGTGTGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGAGGCTCCTGCATCCTaGGGCTCAGATCTCCACCGA +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHEAPAS*GSDLHR
Trigger: TCGGTGGAGATCTGAGCCTCAGGATGCAGGAGCCTC...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATGTGGACAGCTGGACATaGGGTGGGCTAGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDVDSWT*GGLALH
Trigger: ATGCAGAGCTAGCCCACCTCATGTCCAGCTGTCCAC...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGCAACTTGCAGGAGAATaGGCCGGATCACCACTAGAG +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQQLAGE*AGSPLE
Trigger: CTCTAGTGGTGATCCGGCTCATTCTCCTGCAAGTTG...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCTCAGGAGTGGGTTCTaGATGGCCCTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDLRSGF*MALRPL
Trigger: GAGAGGTCTGAGGGCCATTCAGAACCCACTCCTGAG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCTCAGGAGTGGGTTCTaGATGGCCCTCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSLRSGF*MALRPL
Trigger: GAGAGGTCTGAGGGCCATTCAGAACCCACTCCTGAG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCTTTGCTGGCCCAGTaGGGGACAGAGCCTAGAACC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSLLAQ*GTEPRT
Trigger: GGTTCTAGGCTCTGTCCCTCACTGGGCCAGCAAAGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGGCGAAGAGACCTCCTaGCCGCCTTGGAAACTGTCA +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDGEETS*PPWKLS
Trigger: TGACAGTTTCCAAGGCGGTCAGGAGGTCTCTTCGCC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCACGCGCAGCTTGTAGTTaGGGGGCGTCTCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSRAACS*GASPRA
Trigger: TGCACGTGGAGACGCCCCGCAACTACAAGCTGCGCG...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGCTTGGTGCAGTTGGCTaGCTTGGGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVLGAVG*LGLQVV
Trigger: AACGACCTGGAGCCCAAGGCAGCCAACTGCACCAAG...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCTTCTCTGTCCGTGTGTaGCACACCAGGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPFSVRV*HTRILV
Trigger: CACCAAGATCCTGGTGTGGCACACACGGACAGAGAA...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGTGATGCCCGTGGGCTaGTCTCTGGTCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPVMPVG*SLVFRI
Trigger: AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCAC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCTCCAAGACAGCCTTATaGTCTGTAAACGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLSKTAL*SVNVNQ
Trigger: CTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCCATGCAGGGCTGGGTaGCTGTTGGGATCCAAGACA +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSPCRAG*LLGSKT
Trigger: TGTCTTGGATCCCAACAGGCACCCAGCCCTGCATGG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTTTGGGGAAAACGTCCTaGAAGGTGGCTCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRILGKTS*KVAQGS
Trigger: AGATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAA...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGTTAAAACAGACCAGATaGAGCTGCCTGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQLKQTR*SCLGAT
Trigger: GGTGGCACCCAGGCAGCTGCATCTGGTCTGTTTTAA...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACACATGCACCTGCTCCTaGAACGTCACAGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDTCTCS*NVTAAL
Trigger: CAGGGCTGCTGTGACGTTGCAGGAGCAGGTGCATGT...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACCCACACGGGATGCCTaGTGGGTCTTGTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIPTRDA*WVLWSE
Trigger: CTCAGACCACAAGACCCAGCAGGCATCCCGTGTGGG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCATGCTGCCTGCTCCTaGCCCAGCTCACGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGHAACS*PSSRVL
Trigger: GAGCACACGTGAGCTGGGGCAGGAGCAGGCAGCATG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGAGAGTCCGGCCCAACTaGAGTCTGAGAAGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWRVRPN*SLRRGR
Trigger: GCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCT...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCTTGCGGAAGCAGGTTTaGAGAGTCCGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSLRKQV*RVRPNW
Trigger: CCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAA...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATATCACCACGTGGATGGTaGGCAGCGTGTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWISPRGW*AACRTM
Trigger: CATGGTCCGACACGCTGCCCACCATCCACGTGGTGA...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAGTGGGCGTCACCACGTaGATGGTGGGCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVVGVTT*MVGSVS
Trigger: CGACACGCTGCCCACCATCCACGTGGTGACGCCCAC...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTACGTGCAGCAGCGTGTTaGCCATGCGCGTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVRAAAC*PCASAR
Trigger: CCGAGCTGACGCGCATGGCCAACACGCTGCTGCACG...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCCAGCCAGTGGAGGTTaGGCACGTGCAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGPASGG*ARAAAC
Trigger: ACACGCTGCTGCACGTGCCCAACCTCCACTGGCTGG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCCATGTCTATTGCAAATaGCCGGTGGGGGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVHVYCK*PVGVKH
Trigger: GTGTTTGACCCCCACCGGCCATTTGCAATAGACATG...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATGGATCTTGGTGCAGTTaGCTGCCTTGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDGSWCS*LPWAPG
Trigger: ACCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCC...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGGGCCCTGGTCACGCTaGATGGAGAGAACAACAGGT +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPGPWSR*MERTTG
Trigger: ACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGAGGGAGTTAGGGAATaGCCTTGGCCTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSEGVRE*PWPPSS
Trigger: AGAGGAGGGAGGCCAAGGCCATTCCCTAACTCCCTC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGGAGTGGGTTCTGAATaGCCCTCAGACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPGVGSE*PSDLSW
Trigger: CCAGGAGAGGTCTGAGGGCCATTCAGAACCCACTCC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCCACCCACTCAGGAGTaGGTTCTGAATGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDPPTQE*VLNGPQ
Trigger: CTGAGGGCCATTCAGAACCCACTCCTGAGTGGGTGG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGTCTGATTCCATCAGATaGTCTCATGAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: TPHPGHQVSRALVTLDGESDSIR*SHEYCG
Trigger: CCCACAGTATTCATGAGACCATCTGATGGAATCAGA...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACATGGGGAGCAGAAGCTaGGGCAGCACATGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDMGSRS*GSTWEW
Trigger: CCACTCCCATGTGCTGCCCCAGCTTCTGCTCCCCAT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGTTCCCTGTGGGAGAGTaGAGGGTGGTTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVFPVGE*RVVPRW
Trigger: CCATCTGGGAACCACCCTCCACTCTCCCACAGGGAA...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAACAAAGGTGCAGGAGTaGCTTGGCCACACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGTKVQE*LGHTQE
Trigger: CTCCTGGGTGTGGCCAAGCCACTCCTGCACCTTTGT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAACGGGGCTGCAAGGTTaGCCAGCACTGGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSTGLQG*PALVPS
Trigger: AGAGGGGACCAGTGCTGGCCAACCTTGCAGCCCCGT...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACACTGCTGGGGCTGCATaGGGCTGCGTGTCAAGACAC +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDTAGAA*GCVSRH
Trigger: GTGTCTTGACACGCAGCCCCATGCAGCCCCAGCAGT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCACCAGGTGCTGGGCTaGGCAGCAGCAAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGHQVLG*AAARRG
Trigger: CCCTCTTCTTGCTGCTGCCCAGCCCAGCACCTGGTG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCACCACCGAGGGGTCAGTaGAGCCCTTCTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSPPRGQ*SPSCPH
Trigger: ATGAGGGCAAGAAGGGCTTCACTGACCCCTCGGTGG...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCTCACAACTCCCATCCTaGCACTTGCACCATATCTGT +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDASQLPS*HLHHIC
Trigger: ACAGATATGGTGCAAGTGTCAGGATGGGAGTTGTGA...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCTTTTCACTTCTGTGCTaGGCACCATGCATGATGCAG +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAFSLLC*APCMMQ
Trigger: CTGCATCATGCATGGTGCTCAGCACAGAAGTGAAAA...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGAAGGTGACACCCTCTaGAGAGTCTGGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGEGDTL*RVWWQK
Trigger: CTTCTGCCACCAGACTCTTCAGAGGGTGTCACCTTC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGATGTACACGTACTCGGTaGGCACCACCTCCACGATGT +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGCTRTR*APPPRC
Trigger: ACATCGTGGAGGTGGTGCGCACCGAGTACGTGTACA...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTTGGAGGTTGGGCACGTaGAGCAGCGTGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGWRLGT*SSVLAM
Trigger: CATGGCCAACACGCTGCTGCACGTGCCCAACCTCCA...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAACAGGCTGGCTGGAGTTaGGCGGGAAGGTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEQAGWS*AGRSRA
Trigger: TGCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTG...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCCAGCCATGTCTATTaGAAATGGCCGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSSHVY*KWPVGV
Trigger: GACCCCCACCGGCCATTTGCAATAGACATGGCTGGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCGTTCTCGAAGGAGGCTaGTTTCCTGGTAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSVLEGG*FPGSLP
Trigger: AGGGAGGCTACCAGGAAAGCAGCCTCCTTCGAGAAC...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCACACCAGGATCTTGGTaGAGTTGGCTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPTPGSW*SWLPWA
Trigger: AGCCCAAGGCAGCCAACTGCACCAAGATCCTGGTGT...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTCCAAGACAGCCTTATaGTCTGTAAACGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTSKTAL*SVNVNQ
Trigger: CTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTTGTGAGGCAGTAGAGTaGCCACACATAAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRICEAVE*PHISSP
Trigger: TGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACA...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGACCGTGGGGTGCCTTCTaGTCCCATCCAGTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGPWGAF*SHPVFL
Trigger: CAAAAAGACTGGATGGGAGCAGAAGGCACCCCACGG...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGTCACAGCAGCCCTGTaGAGTAGGCATGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIVTAAL*SRHGCG
Trigger: ACCACAGCCATGCCTACTGCACAGGGCTGCTGTGAC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCAGGCAGAGTCGAGTaGTATGGCCGAGGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSGRVE*YGRGGF
Trigger: AAACCCTCCTCGGCCATAGCACTCGACTCTGCCTGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGGGATTCCTCAGTCCTaGAGAGGGTCCACTGGTAGC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLGIPQS*RGSTGS
Trigger: GCTACCAGTGGACCCTCTGCAGGACTGAGGAATCCC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGTCAGAAGCACAGACTaGAGAGACACCAGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALVRSTD*RDTRFK
Trigger: TTTAAACCTGGTGTCTCTGCAGTCTGTGCTTCTGAC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCAGGGGTCAGGAACCCTaGGGGGTGGACACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVRGQEP*GVDTCG
Trigger: GCCGCAGGTGTCCACCCCCCAGGGTTCCTGACCCCT...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGTGCGAGGGTGCTCTaGTGCCAGACAGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGGARVL*CQTVMS
Trigger: GCTCATCACTGTCTGGCACCAGAGCACCCTCGCACC...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAACACGGACACCCTCCTaGTGCTGCGCATCTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWITRTPS*CCASLR
Trigger: TCGAAGAGATGCGCAGCACCAGGAGGGTGTCCGTGT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGGGATCTTGGTGCAGTTaGCTGCCTTGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWGSWCS*LPWAPG
Trigger: ACCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCC...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGCCACACCAGGATCTTaGTGCAGTTGGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHATPGS*CSWLPW
Trigger: CCAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGC...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAGAGCACCAGCTTGGCTaGTGCTGGACACCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVEHQLG*CWTPHP
Trigger: AGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTC...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTAAACGTCCTGCAAGGTaGCTCAGGGATCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIKRPAR*LRDLIP
Trigger: TGGAATCAGATCCCTGAGCCACCTTGCAGGACGTTT...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTTTTTGGCTAAGAAGGTaGCCTCAGACCAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIFWLRR*PQTSQA
Trigger: AGCTTGGCTGGTCTGAGGCCACCTTCTTAGCCAAAA...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTTGCTCCACGGGGACCTaGGTCATGCTGATTGCCCTC +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGCSTGT*VMLIAL
Trigger: GAGGGCAATCAGCATGACCCAGGTCCCCGTGGAGCA...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGAGTGGAAGACCCACTaGGGTTCAACGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVEWKTH*GSTSQA
Trigger: TGCCTGTGACGTTGAACCCCAGTGGGTCTTCCACTC...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGACCCAGTGCCCAGTGTTaGATACGGACAGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGPSAQC*IRTVPH
Trigger: GTGAGGTACTGTCCGTATCCAACACTGGGCACTGGG...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACTTCTGGGATGGTCCCTaGGGGGAAGTACGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDFWDGP*GEVREC
Trigger: GCACTCTCGTACTTCCCCCCAGGGACCATCCCAGAA...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTTTCAGGTGGCCCAGTaGGAAGGGGACTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLFQVAQ*EGDCGD
Trigger: GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAA...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAGGCCCAACTGGAGTCTaGGAAGGGGTCGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEGPTGV*EGVAVQ
Trigger: CTGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCC...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCAACTTCCCTATAGCATaGGAGATGTCCGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDANFPIA*EMSEDE
Trigger: CTCATCTTCGGACATCTCTCATGCTATAGGGAAGTT...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGCCAAGGAGAGAAGATaGGTGTCCTGCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIAKERR*VSCQLS
Trigger: ACTGAGCTGGCAGGACACTCATCTTCTCTCCTTGGC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGGACAGTCCTCCAAAATaGGAACAGCAGGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWDSPPK*EQQGAQ
Trigger: TTGGGCCCCCTGCTGTTCTCATTTTGGAGGACTGTC...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATACACCCTCCTGGTGCTaGGCATCTCTTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHTPSWC*ASLRRA
Trigger: AGCTCTTCGAAGAGATGCGCAGCACCAGGAGGGTGT...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGTTCTCGAAGGAGGCTaGTTTCCTGGTAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIVLEGG*FPGSLP
Trigger: AGGGAGGCTACCAGGAAAGCAGCCTCCTTCGAGAAC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATTCTCTGTCCGTGTGTaGCACACCAGGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGFSVRV*HTRILV
Trigger: CACCAAGATCCTGGTGTGGCACACACGGACAGAGAA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCATGCTCCACTTGACTaGGGGGTCTTCTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDHAPLD*GVFLSP
Trigger: GGGAGATAAGAAGACCCCGCAGTCAAGTGGAGCATG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCCATGCTCCACTTGACTaGGGGGTCTTCTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPHAPLD*GVFLSP
Trigger: GGGAGATAAGAAGACCCCGCAGTCAAGTGGAGCATG...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTACTGAGGTACAGGGGGTaGCTATTAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVLRYRG*LLGPGS
Trigger: GGAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAG...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATCCATGCCACCCCACTTaGTTCCAAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHPCHPT*FQGLGF
Trigger: GAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGG...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATCCCCTCTCGCAGCCTaGTGCTTCTGCCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSESPLAA*CFCLGL
Trigger: AAGCCCCAGGCAGAAGCAGCAGGCTGCGAGAGGGGA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGCTCAGCTCTTCACATaGACCTGCTCCTGCAACGTC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLAQLFT*TCSCNV
Trigger: GACGTTGCAGGAGCAGGTGCATGTGAAGAGCTGAGC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACAGGTATAGGAATGGATaGCAGCAAGGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDRYRNG*QQGWAL
Trigger: CAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGCCCACATCTGCCCTaGATCCTGAGGCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWCPHLP*ILRLRS
Trigger: AGATCTGAGCCTCAGGATGCAGGGCAGATGTGGGCA...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCGGCATCTCCAAGGCTaGCTGCACCCACGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVRHLQG*LHPRLL
Trigger: GAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATCCACCACCAGCCAGTaGAGGTTGGGCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSESTTSQ*RLGTCS
Trigger: GCTGCACGTGCCCAACCTCCACTGGCTGGTGGTGGA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAATTGCAAATGGCCGGTaGGGGTCAAACACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGIANGR*GSNTVF
Trigger: GAAGACGGTGTTTGACCCCCACCGGCCATTTGCAAT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGCCACACCAGGATCTTaGTGCAGTTGGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSATPGS*CSWLPW
Trigger: CCAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGC...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAGCCGTGGGGAGAGGATaGAAGGCCAAGAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVAVGRG*KAKNRV
Trigger: GACCCTGTTCTTGGCCTTCCATCCTCTCCCCACGGC...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCTGGACACCCCACCCTaGCCATCAGGTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLDTPP*PSGLSG
Trigger: GCCCGAGAGACCTGATGGCCAGGGTGGGGTGTCCAG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATGAGGTATGTCTGATTTaGGGGCAGCTCTCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDEVCLI*GQLSGR
Trigger: TCTTCCCGAGAGCTGCCCCCAAATCAGACATACCTC...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCAGGGTGTAAGAGGTTaGGGAAAACGTCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSQGVRG*GKRPAR
Trigger: CCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTGGAACAGACTGGGTTTaGAAAACAGTGGTCATCATG +
Preference number: 4 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCAGTDWV*KTVVIM
Trigger: CATGATGACCACTGTTTTCCAAACCCAGTCTGTTCC...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGGGCCAGTATGCCTATaGAGATCGGCCATACTGGGA +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDGPVCL*RSAILG
Trigger: TCCCAGTATGGCCGATCTCCATAGGCATACTGGCCC...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAACAAGGACCCCAGAATaGCTTCTAGGACCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGTRTPE*LLGPWV
Trigger: GACCCAAGGTCCTAGAAGCCATTCTGGGGTCCTTGT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGGCGGTGTTTGTCTGTaGTCGCAGGCTGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIGGVCL*SQAVSN
Trigger: GTTAGAGACAGCCTGCGACCACAGACAAACACCGCC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAACCACTGCCTTTCCTTTaGGGCAGCCTCTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEPLPFL*GSLSAP
Trigger: GGGGGCTGAGAGGCTGCCCCAAAGGAAAGGCAGTGG...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGACACGGGATGCCTGCTaGGTCTTGTGGTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLTRDAC*VLWSEM
Trigger: CATCTCAGACCACAAGACCCAGCAGGCATCCCGTGT...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACACATGGCAAGGACACTaGGCGAAGAGACCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDTWQGH*AKRPPD
Trigger: GTCAGGAGGTCTCTTCGCCCAGTGTCCTTGCCATGT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCTGGATACTTTCAGGTaGCCCAGTGGGAAGGGGACT +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDLDTFR*PSGKGT
Trigger: AGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCGCTTGGTTTCCAAAGTaGCATCCAGGGTGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPAWFPK*HPGCKR
Trigger: CCTCTTACACCCTGGATGTCACTTTGGAAACCAAGC...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAAGGGCTCTGCGAAGATaGAGGGATGTCCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIRALRR*RDVLCE
Trigger: CTCACATAGGACATCCCTTCATCTTCGCAGAGCCCT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGCTGATTGCCCTCCTTaGCCTCGTCTTTACAATAGG +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGADCPP*PRLYNR
Trigger: CCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAGC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAGGACCTGGGTCATGCTaGTTGCCCTCCTTGACCTCG +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEGPGSC*LPSLTS
Trigger: CGAGGTCAAGGAGGGCAATCAGCATGACCCAGGTCC...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGGTCTTGTGGTCTaGGATGCAAGTGACTTCATG +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGLGLVV*DASDFM
Trigger: CATGAAGTCACTTGCATCTCAGACCACAAGACCCAG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGCAACTGTCCATCACCTaGGGACCTCTTTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWQLSIT*GPLLSA
Trigger: GGCAGACAAAAGAGGTCCTCAGGTGATGGACAGTTG...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACACCCAGCTGCGTGGGTaGAAGTTAATGCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDTQLRG*KLMPGY
Trigger: GTATCCAGGCATTAACTTTCACCCACGCAGCTGGGT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGTGGTGCCCCGCGGGATaGGTGGGTCGCGGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMWCPAG*VGRGRL
Trigger: GAGACGCCCGCGACCCACGCATCCCGCGGGGCACCA...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTACACCCTCCTGGTGCTaGGCATCTCTTCGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGTPSWC*ASLRRA
Trigger: AGCTCTTCGAAGAGATGCGCAGCACCAGGAGGGTGT...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTACACCAGGATCTTGGTaGAGTTGGCTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGTPGSW*SWLPWA
Trigger: AGCCCAAGGCAGCCAACTGCACCAAGATCCTGGTGT...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCTGTGAGGCAGTAGAGTaGCCACACATAAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LSHATPLASKGLVSKVTSCEAVE*PHISSP
Trigger: TGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACA...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCTGTGTGGTGGGGCTTaGCAGCGAGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLCGGA*QRGSRE
Trigger: TTCCCTGCTCCCTCGCTGGCAAGCCCCACCACACAG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCACACACAGGCCAAATaGTTCCTCTGGCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGHTQAK*FLWPGP
Trigger: TGGTCCAGGCCAGAGGAAGCATTTGGCCTGTGTGTG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAAGGAGCTTTCTCAAGTaGTCCTGGTGTTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIRSFLK*SWCWCR
Trigger: CCTGCACCAACACCAGGAGCACTTGAGAAAGCTCCT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATGGAGCACCGCTCTGTaGAGGACAGAGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEWSTAL*RTEHQV
Trigger: CACCTGGTGCTCTGTCCTGCACAGAGCGGTGCTCCA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAGGGGAAGTACGAGAGTaGCTTCCTCTTCCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIGEVRE*LPLPCQ
Trigger: TTGACACGGAAGAGGAAGGCACTCTCGTACTTCCCC...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGCATCCAGGCTGCTaGAAAGGCCATGATTTTGTC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGLHPGC*KGHDFV
Trigger: GACAAAATCATGGCCTTTGCAGCAGCCTGGATGCAG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACATGTCTATTGCAAATaGCCGGTGGGGGTCAAACAC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGHVYCK*PVGVKH
Trigger: GTGTTTGACCCCCACCGGCCATTTGCAATAGACATG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GAGAGGAGCAGAGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTGGGTTTGGAAAACAGTaGTCATCATGGACCCATTTC +
Preference number: 4 (lower is better)
Translates to: ERSRALVMPVGCSLVFRIGFGKQ*SSWTHF
Trigger: GAAATGGGTCCATGATGACCACTGTTTTCCAAACCC...AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCTCTGCTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATGGGGAGGCTGGGCCTaGCTGGGGCTTCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEWGGWA*LGLQKC
Trigger: ACATTTCTGAAGCCCCAGCCAGGCCCAGCCTCCCCA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAAACCGTTCTCTCACATaGCAAGGACACTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWINRSLT*QGHWAK
Trigger: CTTCGCCCAGTGTCCTTGCCATGTGAGAGAACGGTT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAAGGAGAATGAGCCACTaGGATTCCTCAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIRRMSH*DSSVLQ
Trigger: CTGCAGGACTGAGGAATCCCAGTGGCTCATTCTCCT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCCTGTTAGAGTGGAATaGGCTCTGTCCTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDPVRVE*ALSFPQ
Trigger: CTGTGGGAAGGACAGAGCCCATTCCACTCTAACAGG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGAAGGGATGTCCTATGTaGGGAAAGTGTAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVKGCPM*GKCSSV
Trigger: CACTGAGCTACACTTTCCTCACATAGGACATCCCTT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTGCACCATATCTGTaGCCAACCTCAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWILAPYL*PTSDLR
Trigger: CCTGAGATCTGAGGTTGGTCACAGATATGGTGCAAG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAGTTCTCGAAGGAGGCTaGTTTCCTGGTAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVVLEGG*FPGSLP
Trigger: AGGGAGGCTACCAGGAAAGCAGCCTCCTTCGAGAAC...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCTCCTCTTTCCAGGCTaGAGGAGGTCCCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLLFPG*RRSHLA
Trigger: GGCAAGGTGGGACCTCCTGCAGCCTGGAAAGAGGAG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCCCATCCTGACACTTaGACCATATCTGTGACCAAC +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSHPDT*TISVTN
Trigger: GTTGGTCACAGATATGGTGCAAGTGTCAGGATGGGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACAGCTGCATCCAGGCTaGTGCAAAGGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIQLHPG*CKGHDF
Trigger: AAAATCATGGCCTTTGCAGCAGCCTGGATGCAGCTG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACGTGCAGCCCTAAAATaGCAGCTACTTATCAAAGCC +
Preference number: 4 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGRAALK*QLLIKA
Trigger: GGCTTTGATAAGTAGCTGGCATTTTAGGGCTGCACG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGTGCCCCGTTCACCCGTaGGGCCTCGTACCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRCPVHP*GLVPQA
Trigger: GGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCA...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAATGCCCCGTTCACCCGTaGGGCCTCGTACCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQCPVHP*GLVPQA
Trigger: GGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCA...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCAGGTCTCTCGGGCCCTaGTCACGCTGGATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVRSLGP*SRWMER
Trigger: TCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCT...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTATCAGAATTCCCTGGCTaGGTGTCCTGTGTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SKTALCSVNVNQRRATEVSEFPG*VSCVVV
Trigger: CACGACCACACAGGACACCCAGCCAGGGAATTCTGA...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGCCTGCTGGGTCTTGTaGTCTGAGATGCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGACWVL*SEMQVT
Trigger: AGTCACTTGCATCTCAGACCACAAGACCCAGCAGGC...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCACAGAGTCGAGTGCTATaGCCGAGGAGGGTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSQSRVL*PRRVFS
Trigger: GCTAAAAACCCTCCTCGGCCATAGCACTCGACTCTG...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAAAGGACCCAGCTGCGTaGGTGAAAGTTAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSKDPAA*VKVNAW
Trigger: CCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTT...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCCATCAGATGGTCTCATaGATACTGTGGGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: AGFCEAVECPHISSPPVPHQMVS*ILWEIK
Trigger: TTTAATCTCCCACAGTATTCATGAGACCATCTGATG...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCTTGGCTGGCTTCTGTaGGGCAGTAGAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLGWLL*GSRVPT
Trigger: TGTGGGCACTCTACTGCCTCACAGAAGCCAGCCAAG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCTTAGGTGAAAACAACTaGCCTAGCATCTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPLGENN*PSICPK
Trigger: CTTTGGGCAGATGCTAGGTCAGTTGTTTTCACCTAA...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCGAAGCCATTATGGCTTaGAAACCCCATAACTTTAAT +
Preference number: 4 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAEAIMA*KPHNFN
Trigger: ATTAAAGTTATGGGGTTTTCAAGCCATAATGGCTTC...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGCAGCCGTTCTTCCTTTaGGAGTCCTCAGTGTGTATT +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLQPFFL*ESSVCI
Trigger: AATACACACTGAGGACTCTCAAAGGAAGAACGGCTG...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGCACCACCCACCGCCTTaGCCACTGCCCACCATGGGC +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMHHPPP*PLPTMG
Trigger: GCCCATGGTGGGCAGTGGGCAAGGCGGTGGGTGGTG...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAACACCACCCACCGCCTTaGCCACTGCCCACCATGGGC +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQHHPPP*PLPTMG
Trigger: GCCCATGGTGGGCAGTGGGCAAGGCGGTGGGTGGTG...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCCTTTCCCAGCCCCTCTaGTACTCCAGAGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLSQPL*YSRVPP
Trigger: AGGAGGGACTCTGGAGTAGCAGAGGGGCTGGGAAAG...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGTTACCATAGGGCTCTaGGAAGATGAAGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSVTIGL*EDEGMS
Trigger: GGACATCCCTTCATCTTCGCAGAGCCCTATGGTAAC...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCTCTCAGCCCCCGCTTaGACTGTTGTTTATACAAAC +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDLSAPA*TVVYTN
Trigger: GTTTGTATAAACAACAGTGCAAGCGGGGGCTGAGAG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGACAGAGTATACGTGTTaGCTTTTCTCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVTEYTC*LFSAAS
Trigger: TGAGGCTGCAGAGAAAAGGCAACACGTATACTCTGT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGACAGGGCCATGGCTCTaGTCCATTTATGAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLTGPWL*SIYESQ
Trigger: CTGACTTTCATAAATGGAGCAGAGCCATGGCCCTGT...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAGGGGTCAGGAACCCTaGGGGGTGGACACCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQRGQEP*GVDTCG
Trigger: GCCGCAGGTGTCCACCCCCCAGGGTTCCTGACCCCT...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCTTGCGGAAGCAGGTTTaGAGAGTCCGGCCCAACTGG +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVLRKQV*RVRPNW
Trigger: CCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAA...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCGCAGTGTGTGGACAGTaGGGCCGTGGGGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVAVCGQ*GRGVLS
Trigger: ACTAAGAACCCCACGGCCCCACTGTCCACACACTGC...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGATAGGGAGGTTGAGCTaGAAGTTTCAACGATCCTGC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLIGRLS*KFQRSC
Trigger: GCAGGATCGTTGAAACTTCCAGCTCAACCTCCCTAT...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGATAGTATCTCACTGTaGTTTCAATTTGCATTTTGG +
Preference number: 4 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALDSISL*FQFAFW
Trigger: CCAAAATGCAAATTGAAACCACAGTGAGATACTATC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGACTGCTGGCTAGAATaGCAGCTCTGTTTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDDCWLE*QLCFKF
Trigger: GAACTTAAAACAGAGCTGCCATTCTAGCCAGCAGTC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGTGTGATGCTGAGATCTaGAGTATGATGAATCCCGCT +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVCDAEI*SMMNPA
Trigger: AGCGGGATTCATCATACTCCAGATCTCAGCATCACA...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTACAGGCACAGGGCCATaGCTCTGCTCCATTTATGAA +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGTGTGP*LCSIYE
Trigger: TTCATAAATGGAGCAGAGCCATGGCCCTGTGCCTGT...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGTGAAAGTTAATGCCTaGATACTTTCAGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGVKVNA*ILSGGP
Trigger: TGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGCAGGTGCGTGTAGTTaGGGCCGGTGTCGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMAGACS*GRCRAA
Trigger: TGCTGCGCGACACCGGCCTCAACTACACGCACCTGC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGCTCCCGCCACAGCCTaGGGTACAGGGGGTGCCTAT +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMAPATA*GTGGAY
Trigger: ATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGCTCTCACTCATAAGTaGGAATGCATCGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLALTHK*ECIVFG
Trigger: ACCAAACACGATGCATTCTCACTTATGAGTGAGAGC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTAAGATGTTTGGAAGGTaGCACCCTCTGAAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGKMFGR*HPLKSL
Trigger: CAGACTCTTCAGAGGGTGTCACCTTCCAAACATCTT...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCTGTACACGTACTCGGTaGGCACCACCTCCACGATGT +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVCTRTR*APPPRC
Trigger: ACATCGTGGAGGTGGTGCGCACCGAGTACGTGTACA...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAGGCTGGCTGGAGTTaGGCGGGAAGGTCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRQAGWS*AGRSRA
Trigger: TGCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTG...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCTCCAGCCATGTCTATTaGAAATGGCCGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVSSHVY*KWPVGV
Trigger: GACCCCCACCGGCCATTTGCAATAGACATGGCTGGA...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGCGTCACCACGTGGATaGTGGGCAGCGTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMASPRG*WAACRT
Trigger: GGTCCGACACGCTGCCCACCATCCACGTGGTGACGC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGACTGCAGGGCCAGTGTaGGCGCCCACTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRTAGPV*APTAPA
Trigger: AGCAGGTGCAGTGGGCGCCCACACTGGCCCTGCAGT...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGAACAGACTGGGTTTaGAAAACAGTGGTCATCATG +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHGTDWV*KTVVIM
Trigger: CATGATGACCACTGTTTTCCAAACCCAGTCTGTTCC...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGGCCTCACTCCTGTGTaGTGGGGCTTGCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQGLTPV*WGLPAR
Trigger: CCTCGCTGGCAAGCCCCACCACACAGGAGTGAGGCC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACACGTTTTGGTTCTTTaGCCAAGACACGTTTGGATC +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIHVLVL*PRHVWI
Trigger: GATCCAAACGTGTCTTGGCCAAAGAACCAAAACGTG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAAATAGGACATCCTTGTaGAGCACCGCTCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSENRTSL*STALCR
Trigger: CCTGCACAGAGCGGTGCTCCACAAGGATGTCCTATT...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAGTCTGCCTGTTAGAGTaGAATGGGCTCTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEVCLLE*NGLCPS
Trigger: GGAAGGACAGAGCCCATTCCACTCTAACAGGCAGAC...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATCGGGGGTTCCACAATaGAGCCTCAACTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSESGVPQ*SLNCPS
Trigger: TGATGGACAGTTGAGGCTCCATTGTGGAACCCCCGA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATCATCAGATGGTCTCATaGATACTGTGGGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDHQMVS*ILWEIK
Trigger: TTTAATCTCCCACAGTATTCATGAGACCATCTGATG...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGCTTTCCATAGTGGCTaGACTAATTTACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLAFHSG*TNLHSH
Trigger: GTGGGAATGTAAATTAGTTCAGCCACTATGGAAAGC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGGCAGCGTGTTGGCCATaGGCGTCAGCTCGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMAACWP*ASARPS
Trigger: AGAAGGCCGAGCTGACGCGCATGGCCAACACGCTGC...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATTCTGATTCCATCAGATaGTCTCATGAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LASEGAGNRLGLENSGHHSDSIR*SHEYCG
Trigger: CCCACAGTATTCATGAGACCATCTGATGGAATCAGA...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCATTCCCATCTATAAAATaGGGCACTGTGGATCCCTAC +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSFPSIK*GTVDPY
Trigger: GTAGGGATCCACAGTGCCCCATTTTATAGATGGGAA...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACAATCAGCAAGATGTTTaGAAGGTGACACCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDNQQDV*KVTPSE
Trigger: TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATT...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGTCCAGGTCAGGCAGTaGCCTGTGCTGGCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQVQVRQ*PVLALE
Trigger: CTCTAGAGCCAGCACAGGTCACTGCCTGACCTGGAC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCTGAGGTACAGGGGGTaGCTATTAGGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRLRYRG*LLGPGS
Trigger: GGAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAG...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAAAGTTTCAACGATCCTaGCATTTTAGCAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSKFQRS*HFSNWR
Trigger: CCTCCAGTTGCTAAAATGGCAGGATCGTTGAAACTT...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGATTCCTTGCTGTATATaGACCATGTTTTCTTTACCC +
Preference number: 4 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVIPCCI*TMFSLP
Trigger: GGGTAAAGAAAACATGGTGCATATACAGCAAGGAAT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCACATTTCCGTTCTCCATaGCACAGTTTTCCCATCTAT +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSHFRSP*HSFPIY
Trigger: ATAGATGGGAAAACTGTGGCATGGAGAACGGAAATG...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAGAGTCCGGCCCAACTaGAGTCTGAGAAGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQRVRPN*SLRRGR
Trigger: GCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCT...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAATCACCACGTGGATGGTaGGCAGCGTGTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQSPRGW*AACRTM
Trigger: CATGGTCCGACACGCTGCCCACCATCCACGTGGTGA...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTCTCTGGAAGCCATTATaGCTTGAAAACCCCATAACT +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGLWKPL*LENPIT
Trigger: AGTTATGGGGTTTTCAAGCCATAATGGCTTCCAGAG...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGTTCTAATACCAGGATaGAGAAAGCCAAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSVLIPG*RKPRRE
Trigger: TTCTCTCCTTGGCTTTCTCCATCCTGGTATTAGAAC...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR TCA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACAATTTGCATTTTGGTaGCAGTCTTTTGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIQFAFW*QSFEDK
Trigger: TTTGTCCTCAAAAGACTGTCACCAAAATGCAAATTG...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGCAGTGTGTGGACAGTaGGGCCGTGGGGTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQAVCGQ*GRGVLS
Trigger: ACTAAGAACCCCACGGCCCCACTGTCCACACACTGC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATGTCAAGACACGTTTTaGTTCTTTGGCCAAGACACG +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSECQDTF*FFGQDT
Trigger: CGTGTCTTGGCCAAAGAACCAAAACGTGTCTTGACA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CCA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTAATAGCCATTCTGACTaGTGTGAGATAGTATCTCAC +
Preference number: 4 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGNSHSD*CEIVSH
Trigger: GTGAGATACTATCTCACACCAGTCAGAATGGCTATT...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGGTGGCTCTGAAGAGCTaGAGGAAAAGGCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRVALKS*RKRRFP
Trigger: GGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCAC...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAACCATGCCACCCCACTTaGTTCCAAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQPCHPT*FQGLGF
Trigger: GAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGG...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGGGCTGGGTGCCTGTTaGGATCCAAGACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQGLGAC*DPRQPY
Trigger: ATAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCGGGTTTGGAAAACAGTaGTCATCATGGACCCATTTC +
Preference number: 4 (lower is better)
Translates to: TLDGENNRSGISVLKFSVGFGKQ*SSWTHF
Trigger: GAAATGGGTCCATGATGACCACTGTTTTCCAAACCC...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR TCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAATTGGTGACAGTCTTTTaGGGACAAAGAAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSELVTVF*GQRRDV
Trigger: AACATCTCTTCTTTGTCCTCAAAAGACTGTCACCAA...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGTGATGCCCGTGGGCTaGTCTCTGGTCTTCAGAATT +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQVMPVG*SLVFRI
Trigger: AATTCTGAAGACCAGAGAGCAGCCCACGGGCATCAC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGATTGCAAATGGCCGGTaGGGGTCAAACACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMIANGR*GSNTVF
Trigger: GAAGACGGTGTTTGACCCCCACCGGCCATTTGCAAT...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGCTCTGTCCTTTGTTCTaGCATCAGGCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMLCPLF*HQAGLS
Trigger: AGAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAG...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAACTCTGTCCTTTGTTCTaGCATCAGGCTGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQLCPLF*HQAGLS
Trigger: AGAGAGCCCAGCCTGATGCCAGAACAAAGGACAGAG...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAGGGTGTAAGAGGTTaGGGAAAACGTCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRQGVRG*GKRPAR
Trigger: CCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTG...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CCA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAAGAATGCATCGTGTTTaGTTTTCTGTTCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSERMHRV*FSVPVS
Trigger: TGACACAGGAACAGAAAACCAAACACGATGCATTCT...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGATTGTGCTTCCAACTTaGAGGAGAATGAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRIVLPT*RRMSRI
Trigger: GATCCGGCTCATTCTCCTGCAAGTTGGAAGCACAAT...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQGLGFL*LNSLSF
Trigger: AAAGGACAGAGAATTTAAGCACAGAAATCCCAGACC...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR GCA 90 bp TCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGGGTCTGGGATTTCTGTaGTTAAATTCTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SIRWSHEYCGRLNPSQNRGLGFL*LNSLSF
Trigger: AAAGGACAGAGAATTTAAGCACAGAAATCCCAGACC...CCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 90 bp TTGCGCGGGAAGGTCTCGCGCAGCCAGCGCAGGGCCAGGTTGCGCTaGATGGTGCCCCGCGGGATGCGTGGGTCGCGGGCGTCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: LRGKVSRSQRRARLR*MVPRGMRGSRASPR
Trigger: GCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGACCTTCCCGCGCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 90 bp GCGGGAAGGTCTCGCGCAGCCAGCGCAGGGCCAGGTTGCGCTGCATaGTGCCCCGCGGGATGCGTGGGTCGCGGGCGTCTCCGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: AGRSRAASAGPGCAA*CPAGCVGRGRLRAA
Trigger: AGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGACCTTCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 90 bp GCAGCCAGCGCAGGGCCAGGTTGCGCTGCATGGTGCCCCGCGGGATaGGTGGGTCGCGGGCGTCTCCGCGCAGCTTGTAGTTGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: AASAGPGCAAWCPAG*VGRGRLRAACSCGA
Trigger: CGCCCCGCAACTACAAGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 90 bp GGAAGGTCTCGCGCAGCCAGCGCAGGGCCAGGTTGCGCTGCATGGTaGCCCGCGGGATGCGTGGGTCGCGGGCGTCTCCGCGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: GRSRAASAGPGCAAW*PAGCVGRGRLRAAC
Trigger: ACAAGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGACCTTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 90 bp GTCGGCGCCGGGCGGCGTTTCGCGTCGGGGGTCACTGCCCTCATCTaGGGAGTCGGGAGACCGGCGATGTGGGAGGAGAGCGCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: VGAGRRFASGVTALI*GVGRPAMWEESAGY
Trigger: GTAGCCGGCGCTCTCCTCCCACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGTGACCCCCGACGCGAAACGCCGCCCGGCGCCGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CCAGCGCAGGGCCAGGTTGCGCTGCATGGTGCCCCGCGGGATGCGTaGGTCGCGGGCGTCTCCGCGCAGCTTGTAGTTGCGGGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: PAQGQVALHGAPRDA*VAGVSAQLVVAGRL
Trigger: GAGACGCCCCGCAACTACAAGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 90 bp ACTCCCTGGGGTCGGCGCCGGGCGGCGTTTCGCGTCGGGGGTCACTaGCCTCATCTGCGGAGTCGGGAGACCGGCGATGTGGGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: TPWGRRRAAFRVGGH*PHLRSRETGDVGGE
Trigger: CTCTCCTCCCACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGTGACCCCCGACGCGAAACGCCGCCCGGCGCCGACCCCAGGGAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 90 bp GCAGCTTGTAGTTGCGGGGCGTCTCCACGTGCAGGTGCGTGTAGTTaGGGCCGGTGTCGCGCAGCAGGCGCGCGGTCAGCGGCGTCCGGC +
Preference number: 5 (lower is better)
Translates to: AACSCGASPRAGACS*GRCRAAGARSAASG
Trigger: GCCGGACGCCGCTGACCGCGCGCCTGCTGCGCGACACCGGCCTCAACTACACGCACCTGCACGTGGAGACGCCCCGCAACTACAAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 90 bp TGCGCACCACCTCCACGATGTCGCGGTCAGACGTGCAGTACTCCCTaGGGTCGGCGCCGGGCGGCGTTTCGCGTCGGGGGTCACTGCCCT +
Preference number: 5 (lower is better)
Translates to: CAPPPRCRGQTCSTP*GRRRAAFRVGGHCP
Trigger: AGGGCAGTGACCCCCGACGCGAAACGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGTCTGACCGCGACATCGTGGAGGTGGTGCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS CCA 90 bp AGTCGGGAGACCGGCGATGTGGGAGGAGAGCGCCGGCTACGGCCCTaGATTCAGAGCGGGACGCCACCCACCCTGCCAGGGCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRETGDVGGERRLRP*IQSGTPPTLPGHPP
Trigger: AGGAGGGTGCCCTGGCAGGGTGGGTGGCGTCCCGCTCTGAATCCAGGGCCGTAGCCGGCGCTCTCCTCCCACATCGCCGGTCTCCCGACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp ACACGTACTCGGTGCGCACCACCTCCACGATGTCGCGGTCAGACGTaGAGTACTCCCTGGGGTCGGCGCCGGGCGGCGTTTCGCGTCGGG +
Preference number: 5 (lower is better)
Translates to: TRTRCAPPPRCRGQT*STPWGRRRAAFRVG
Trigger: CCCGACGCGAAACGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGTCTGACCGCGACATCGTGGAGGTGGTGCGCACCGAGTACGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS CCA 90 bp AAAGCCCCAGGGCCGCAGCACTGCGGCAGCAACCAGGGCCCACTGTaGGCCCGCAGGAGCCTGAGGCAGCTCCCGGAGTTCTCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: KAPGPQHCGSNQGPL*ARRSLRQLPEFSSP
Trigger: AGGGCTTGAGAACTCCGGGAGCTGCCTCAGGCTCCTGCGGGCCCACAGTGGGCCCTGGTTGCTGCCGCAGTGCTGCGGCCCTGGGGCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp TCGGGGGTCACTGCCCTCATCTGCGGAGTCGGGAGACCGGCGATGTaGGAGGAGAGCGCCGGCTACGGCCCTGGATTCAGAGCGGGACGC +
Preference number: 5 (lower is better)
Translates to: SGVTALICGVGRPAM*EESAGYGPGFRAGR
Trigger: GCGTCCCGCTCTGAATCCAGGGCCGTAGCCGGCGCTCTCCTCCCACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGTGACCCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGCCAGGCTGGCTGGAGTaGCGCGGGAAGGTCTCGCGC +
Preference number: 5 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLPGWLE*RGKVSR
Trigger: GCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTGG...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 90 bp TGGCCGGTGGGGGTCAAACACCGTCTTCCAGCCGACCACCTTCCCTaGCCCGTTCACCCGTGGGGCCTCGTACCGCAGGCCACCCACGAA +
Preference number: 5 (lower is better)
Translates to: WPVGVKHRLPADHLP*PVHPWGLVPQATHE
Trigger: TTCGTGGGTGGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 90 bp GTAGGTGGGCGTCACCACGTGGATGGTGGGCAGCGTGTCGGACCATaGCGGGGGCCGCGTGTACACGTACTCGGTGCGCACCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: VGGRHHVDGGQRVGP*RGPRVHVLGAHHLH
Trigger: GTGGAGGTGGTGCGCACCGAGTACGTGTACACGCGGCCCCCGCCATGGTCCGACACGCTGCCCACCATCCACGTGGTGACGCCCACCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS GCA 90 bp GCAGCGTGTCGGACCATGGCGGGGGCCGCGTGTACACGTACTCGGTaGGCACCACCTCCACGATGTCGCGGTCAGACGTGCAGTACTCCC +
Preference number: 5 (lower is better)
Translates to: AACRTMAGAACTRTR*APPPRCRGQTCSTP
Trigger: GGGAGTACTGCACGTCTGACCGCGACATCGTGGAGGTGGTGCGCACCGAGTACGTGTACACGCGGCCCCCGCCATGGTCCGACACGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS CCA 90 bp CCCTACTCATCTGGAGGGAGCTGGCCACACTGCCCTGTGCAGGGCTaGGCTAGCAGAGCACGTGGCACTGCCCCGCTGTGGTGTGGACGC +
Preference number: 5 (lower is better)
Translates to: PYSSGGSWPHCPVQG*ASRARGTAPLWCGR
Trigger: GCGTCCACACCACAGCGGGGCAGTGCCACGTGCTCTGCTAGCCCAGCCCTGCACAGGGCAGTGTGGCCAGCTCCCTCCAGATGAGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 90 bp CTTCGGCATCTCCAAGGCTGGCTGCACCCACGGCTCCTCATTACCTaGGTGGCGGTAAGTTCAGGAGAGGGGCGGCCACGGGCGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LRHLQGWLHPRLLIT*VAVSSGEGRPRAAA
Trigger: TGCCGCCGCCCGTGGCCGCCCCTCTCCTGAACTTACCGCCACTCAGGTAATGAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000531510.1
CDS GCA 90 bp CTGGCCTGGACCACAGCCACCCTCCTCTGCAATGGCTGCCCCCACTaGAGGGCCCTAGCACCTGCTTGGAGGCTGAAGCAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LAWTTATLLCNGCPH*RALAPAWRLKQEGG
Trigger: CCCTCCTTCCTGCTTCAGCCTCCAAGCAGGTGCTAGGGCCCTGCAGTGGGGGCAGCCATTGCAGAGGAGGGTGGCTGTGGTCCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp AGCCTCGGGCAGCCCAGCCAGCCTCACTGTGCCCACCCGTCCCAGTaGCCAGTGTTGGATACGGACAGTACCTCACCTGGGGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: SLGQPSQPHCAHPSQ*PVLDTDSTSPGGHA
Trigger: AGCATGGCCCCCAGGTGAGGTACTGTCCGTATCCAACACTGGGCACTGGGACGGGTGGGCACAGTGAGGCTGGCTGGGCTGCCCGAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp CTCCCTAGCCCTACTCATCTGGAGGGAGCTGGCCACACTGCCCTGTaGAGGGCTGGGCTAGCAGAGCACGTGGCACTGCCCCGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LPSPTHLEGAGHTAL*RAGLAEHVALPRCG
Trigger: ACCACAGCGGGGCAGTGCCACGTGCTCTGCTAGCCCAGCCCTGCACAGGGCAGTGTGGCCAGCTCCCTCCAGATGAGTAGGGCTAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTG +
Preference number: 5 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTIAEAG*ESPAQL
Trigger: CAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAAT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS CCA 90 bp TTATCAAGCAGAACACAGAGAGCCCCCAGCCTGGAGAACGCCAGCTaGCCGGCAGGGGGCAGGTCGTGGGATGTGATGCCTGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSSRTQRAPSLENAS*PAGGRSWDVMPGLG
Trigger: GCCCAGCCCAGGCATCACATCCCACGACCTGCCCCCTGCCGGCCAGCTGGCGTTCTCCAGGCTGGGGGCTCTCTGTGTTCTGCTTGATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp AGGTCCCAGGCCTCCAAGCCTCTCGAACCTGGGCCAGGCGCAGGGTaGGTAAGGGGCACACACAGGCCAAATGCTTCCTCTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: RSQASKPLEPGPGAG*VRGTHRPNASSGLD
Trigger: GTCCAGGCCAGAGGAAGCATTTGGCCTGTGTGTGCCCCTTACCCACCCTGCGCCTGGCCCAGGTTCGAGAGGCTTGGAGGCCTGGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CCACCCGTCCCAGTGCCCAGTGTTGGATACGGACAGTACCTCACCTaGGGGCCATGCTGCCTGCTCCTGCCCCAGCTCACGTGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: PPVPVPSVGYGQYLT*GPCCLLLPQLTCAH
Trigger: GTGAGCACACGTGAGCTGGGGCAGGAGCAGGCAGCATGGCCCCCAGGTGAGGTACTGTCCGTATCCAACACTGGGCACTGGGACGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAAGGGCCATGCTCCACTaGACTGCGGGGTCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTRAMLH*TAGSSY
Trigger: ATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCCT...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCAGGCGAGGGGCCTAGCAGCCGAGGTGGGCGGTGGGGAGGCAGTGTGTGGACAGGGGAGGGCAGGAGTTaGAGGCACACTGTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGEGPSSRGGRWGGSVWTGEGRS*RHTVLS
Trigger: AGAAAGAACAGTGTGCCTCAAACTCCTGCCCTCCCC...TGTCCACACACTGCCTCCCCACCGCCCACCTCGGCTGCTAGGCCCCTCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGACGGGGCTGCAAGGTaGGCCAGCACTGGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALDGAAR*ASTGPL
Trigger: GAGGGGACCAGTGCTGGCCAACCTTGCAGCCCCGTC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp ACAGGCCAAATGCTTCCTCTGGCCTGGACCACAGCCACCCTCCTCTaGAATGGCTGCCCCCACTGCAGGGCCCTAGCACCTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: TGQMLPLAWTTATLL*NGCPHCRALAPAWR
Trigger: CCTCCAAGCAGGTGCTAGGGCCCTGCAGTGGGGGCAGCCATTGCAGAGGAGGGTGGCTGTGGTCCAGGCCAGAGGAAGCATTTGGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp ACCTGGGCCAGGCGCAGGGTGGGTAAGGGGCACACACAGGCCAAATaGTTCCTCTGGCCTGGACCACAGCCACCCTCCTCTGCAATGGCT +
Preference number: 5 (lower is better)
Translates to: TWARRRVGKGHTQAK*FLWPGPQPPSSAMA
Trigger: AGCCATTGCAGAGGAGGGTGGCTGTGGTCCAGGCCAGAGGAAGCATTTGGCCTGTGTGTGCCCCTTACCCACCCTGCGCCTGGCCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CGGCCACTGTCATCGGCAGCATGTGGGGTGTGTGGCACGCTAGCGTaGAGCTCATCTGAACGGACCCAGGAGGCCTGCTCGTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RPLSSAACGVCGTLA*SSSERTQEACSWLF
Trigger: GAAGAGCCACGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCACGCTAGCGTGCCACACACCCCACATGCTGCCGATGACAGTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGACCAGCCAGTGGAGGTaGGGCACGTGCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SARDARGLLSGLQNSLAGTSQWR*GTCSSV
Trigger: CACGCTGCTGCACGTGCCCAACCTCCACTGGCTGGT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCACCAGCCAGTGGAGGTaGGGCACGTGCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTTSQWR*GTCSSV
Trigger: CACGCTGCTGCACGTGCCCAACCTCCACTGGCTGGT...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCACCAGCCAGTGGAGGTaGGGCACGTGCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALTSQWR*GTCSSV
Trigger: CACGCTGCTGCACGTGCCCAACCTCCACTGGCTGGT...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCCAGCCAAGCTGACCTaGGCACTTGGCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEPAKLT*ALGWLL
Trigger: CAGAAGCCAGCCAAGTGCCAAGGTCAGCTTGGCTGG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS CCA 90 bp GAGGGTGGCGGCCTGGACGTGTCCGGCAGGTGCTCCACGGGGACCTaGGTCATGCTGATTGCCCTCCTTGACCTCGTCTTTACAATAGGG +
Preference number: 5 (lower is better)
Translates to: EGGGLDVSGRCSTGT*VMLIALLDLVFTIG
Trigger: CCCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAGCATGACCCAGGTCCCCGTGGAGCACCTGCCGGACACGTCCAGGCCGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CCAAATGCTTCCTCTGGCCTGGACCACAGCCACCCTCCTCTGCAATaGCTGCCCCCACTGCAGGGCCCTAGCACCTGCTTGGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PNASSGLDHSHPPLQ*LPPLQGPSTCLEAE
Trigger: TTCAGCCTCCAAGCAGGTGCTAGGGCCCTGCAGTGGGGGCAGCCATTGCAGAGGAGGGTGGCTGTGGTCCAGGCCAGAGGAAGCATTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTACGTGCAGCAGCGTGTaGGCCATGCGCGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCATCSSV*AMRVSS
Trigger: CGAGCTGACGCGCATGGCCAACACGCTGCTGCACGT...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp GCGGGGTCTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCCTAGAGCCTACCCCTTaGCCACTGCTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGSSYLPPALHHCRASVGLEPTP*PLLEEK
Trigger: CTTCTCCTCCAGCAGTGGCAAAGGGGTAGGCTCTAG...GCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp GACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGACCCATGCCACCCCACTaGCTTCCAAGGGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: DTPPWPSGLSGPGHAGWRPMPPH*LPRAWF
Trigger: AAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGG...TCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGGAGGAGGGCGGTGTTaGTCTGTGGTCGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALGGGRC*SVVAGC
Trigger: ACAGCCTGCGACCACAGACAAACACCGCCCTCCTCC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GCAGGACGCGGCGTGGGCAGTGTGTGTGAGTGTAGGGCCCAGGCCTaGCGTGGTCACAACTCCCATCCTGACACTTGCACCATATCTGTG +
Preference number: 5 (lower is better)
Translates to: AGRGVGSVCECRAQA*RGHNSHPDTCTISV
Trigger: CACAGATATGGTGCAAGTGTCAGGATGGGAGTTGTGACCACGGCAGGCCTGGGCCCTACACTCACACACACTGCCCACGCCGCGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GGACCTGTGCCCTTGGACAGTCCCCATACATTAGGGCACGGCTACTaGGTGTGCTCCTGGGCTTCGCCCTTCCCATTGGCTTCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: GPVPLDSPHTLGHGY*VCSWASPFPLASGR
Trigger: ACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAAGGGCACAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CTGCCCTCATCCTTATGTACCGCGAGCAGGGGTGCGAGGGTGCTCTaGTGCCAGACAGTGATGAGCAGAGTCCAGGGCAGCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: LPSSLCTASRGARVL*CQTVMSRVQGSTMR
Trigger: CCTCATCGTGCTGCCCTGGACTCTGCTCATCACTGTCTGGCACCAGAGCACCCTCGCACCCCTGCTCGCGGTACATAAGGATGAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
CDS-3UTR CAA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGCTCACAACCCACCCATaGCGGAAGCAGGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: TPHPGHQVSRALVTLDGELTTHP*RKQVWR
Trigger: TCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAG...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS TCA 90 bp CGTGTGTGTCTGTGTCCGCCCGTAAACTCCTCTTTGCTGGCCCAGTaGGGGACAGAGCCTAGAACCCCACACGGGATGCCTGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: RVCLCPPVNSSLLAQ*GTEPRTPHGMPAGS
Trigger: AGACCCAGCAGGCATCCCGTGTGGGGTTCTAGGCTCTGTCCCTCACTGGGCCAGCAAAGAGGAGTTTACGGGCGGACACAGACACACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp GACAGGCGCCAAGTGCCAGCCACGGGCAGTGGGCTGCCGCAATGTTaGGCTTGGCCCTTCCTCATGGAAGCTTCAGGAACAGCTATGGGT +
Preference number: 5 (lower is better)
Translates to: DRRQVPATGSGLPQC*AWPFLMEASGTAMG
Trigger: ACCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp AGATCTCAGGCGTCTCGGCAAGTAGAGACACAAAAGGCTGTGCCCTaGCCTCCCCGGGTGCCCTCAGAGCCTCAGAGGGAAGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: RSQASRQVETQKAVP*PPRVPSEPQREAST
Trigger: AGTGCTTGCTTCCCTCTGAGGCTCTGAGGGCACCCGGGGAGGGCAGGGCACAGCCTTTTGTGTCTCTACTTGCCGAGACGCCTGAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GAGAGAGCAGAAGCGGATAGCCAGAGACCCAGGTATAGGAATGGATaGCAGCAAGGCTGGGCCCTGCTCTGGGACACACAGCATCGGGGG +
Preference number: 5 (lower is better)
Translates to: ERAEADSQRPRYRNG*QQGWALLWDTQHRG
Trigger: CCCCCGATGCTGTGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCTGGGTCTCTGGCTATCCGCTTCTGCTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GTGCCCTTGGACAGTCCCCATACATTAGGGCACGGCTACTGCGTGTaGTCCTGGGCTTCGCCCTTCCCATTGGCTTCAGGGCGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VPLDSPHTLGHGYCV*SWASPFPLASGRLQ
Trigger: TTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAAGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp TGTGGCACGCTAGCGTGGAGCTCATCTGAACGGACCCAGGAGGCCTaGTCGTGGCTCTTCAGGAGTTCTCATGGGCAAATGGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: CGTLAWSSSERTQEA*SWLFRSSHGQMAPG
Trigger: GCCTGGTGCCATTTGCCCATGAGAACTCCTGAAGAGCCACGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCACGCTAGCGTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CGCAGGTTGACGGCAAATCCAGCCATGTCTATTGCAAATGGCCGGTaGGGGTCAAACACCGTCTTCCAGCCGACCACCTTCCCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: RRLTANPAMSIANGR*GSNTVFQPTTFPAP
Trigger: CGGGGCAGGGAAGGTGGTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCATTTGCAATAGACATGGCTGGATTTGCCGTCAACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS-3UTR CAA 90 bp GCAGTGTGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTG +
Preference number: 5 (lower is better)
Translates to: AVCGQWGRGVLSPGQAVTIAEAG*ESPAQL
Trigger: CAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAAT...GGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATCCAGGCTGGCTGGAGTaGCGCGGGAAGGTCTCGCGC +
Preference number: 5 (lower is better)
Translates to: LASEGAGNRLGLENSGHHPGWLE*RGKVSR
Trigger: GCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTGG...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGCCAGGCTGGCTGGAGTaGCGCGGGAAGGTCTCGCGC +
Preference number: 5 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLPGWLE*RGKVSR
Trigger: GCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTGG...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp CTTCTTATCTCCCTCCCGCCCTGCATCACTGCAGGGCCAGTGTGGGCGCCCACTATCCAGCCATGTCTATaGCAAATGGCCGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LLISLPPCITAGPVWAPTIQPCL*QMAGGG
Trigger: ACCCCCACCGGCCATTTGCAATAGACATGGCTGGAT...AGTGGGCGCCCACACTGGCCCTGCAGTGATGCAGGGCGGGAGGGAGATAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp ACTCTGCTCCCGCCACAGCCTGAGGTACAGGGGGTGCCTATTAGGCCCAGGCTCAGGGCCATGCTCCACTaGACTGCGGGGTCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: TLLPPQPEVQGVPIRPRLRAMLH*TAGSSY
Trigger: ATAAGAAGACCCCGCAGTCAAGTGGAGCATGGCCCT...GAGCCTGGGCCTAATAGGCACCCCCTGTACCTCAGGCTGTGGCGGGAGCAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGAGGGCTGGGTGCCTGTaGGGATCCAAGACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: SARDARGLLSGLQNSLAGRAGCL*GSKTAL
Trigger: TAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCCT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 90 bp GCCAGAGACCCAGGTATAGGAATGGATGCCAGCAAGGCTGGGCCCTaGTCTGGGACACACAGCATCGGGGGTTCCACAATGGAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: ARDPGIGMDASKAGP*SGTHSIGGSTMEPQ
Trigger: TTGAGGCTCCATTGTGGAACCCCCGATGCTGTGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCTGGGTCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GATGTCAGGAAGACAGGCGCCAAGTGCCAGCCACGGGCAGTGGGCTaGCGCAATGTTGAGCTTGGCCCTTCCTCATGGAAGCTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: DVRKTGAKCQPRAVG*RNVELGPSSWKLQE
Trigger: TTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTCTTCCTGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp GCGGATAGCCAGAGACCCAGGTATAGGAATGGATGCCAGCAAGGCTaGGCCCTGCTCTGGGACACACAGCATCGGGGGTTCCACAATGGA +
Preference number: 5 (lower is better)
Translates to: ADSQRPRYRNGCQQG*ALLWDTQHRGFHNG
Trigger: TCCATTGTGGAACCCCCGATGCTGTGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCTGGGTCTCTGGCTATCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp AGGATGATGTCAGGAAGACAGGCGCCAAGTGCCAGCCACGGGCAGTaGGCTGCCGCAATGTTGAGCTTGGCCCTTCCTCATGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: RMMSGRQAPSASHGQ*AAAMLSLALPHGSF
Trigger: GAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTCTTCCTGACATCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp ACGCTAGCGTGGAGCTCATCTGAACGGACCCAGGAGGCCTGCTCGTaGCTCTTCAGGAGTTCTCATGGGCAAATGGCACCAGGCACACAG +
Preference number: 5 (lower is better)
Translates to: TLAWSSSERTQEACS*LFRSSHGQMAPGTQ
Trigger: CTGTGTGCCTGGTGCCATTTGCCCATGAGAACTCCTGAAGAGCCACGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCACGCTAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp GTCCTAGCTTACCGTCGGGTGGTAAAGGTAAGAAATCCCGGTGCCTaGGCTGAGACCCTGCCCACTTCTGCCGTTACGAACCCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: VLAYRRVVKVRNPGA*AETLPTSAVTNPVP
Trigger: GGGCACAGGGTTCGTAACGGCAGAAGTGGGCAGGGTCTCAGCCCAGGCACCGGGATTTCTTACCTTTACCACCCGACGGTAAGCTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCTGCCACACCAGGATCTaGGTGCAGTTGGCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVCHTRI*VQLAAL
Trigger: CAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGCA...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATCGCTGGAGCACCAGCTaGGCTGGTGCTGGACACCCC +
Preference number: 5 (lower is better)
Translates to: LASEGAGNRLGLENSGHHRWSTS*AGAGHP
Trigger: GGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCG...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGAGAGGTATGTCTGATTaGGGGGCAGCTCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: RIPWLGVLCGRAEPRDRERGMSD*GAALGK
Trigger: CTTCCCGAGAGCTGCCCCCAAATCAGACATACCTCT...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCAGGGCTGGGTGCCTGTaGGGATCCAAGACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVRAGCL*GSKTAL
Trigger: TAAGGCTGTCTTGGATCCCAACAGGCACCCAGCCCT...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TCTGGGGAGGTGCGCTGGAGCACCAGCTTGGCTGGTGCTGGACACCCCACCCTGAATTGTGCTTCCAACTaGCAGGAGAATGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: SGEVRWSTSLAGAGHPTLNCASN*QENEPD
Trigger: ATCCGGCTCATTCTCCTGCAAGTTGGAAGCACAATT...CAGGGTGGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCGCACCTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGTGGACAGTGGGGCCGTGGGGTTCTTAGTCCAGGTCAGGCAGTGACCTGTGCTCCCATGCCACCCCACTaGCTTCCAAGGGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CGQWGRGVLSPGQAVTCAPMPPH*LPRAWF
Trigger: AAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGG...AGCACAGGTCACTGCCTGACCTGGACTAAGAACCCCACGGCCCCACTGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCACTGCCTTTCCTTaGGGGCAGCCTCTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDATAFP*GQPLSP
Trigger: GGGGCTGAGAGGCTGCCCCAAAGGAAAGGCAGTGGC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp TCAGGAGTTCTCATGGGCAAATGGCACCAGGCACACAGCAATTGCTaGGGGTCGGGGGAGGAAACCAGCACACACGCAGTCGCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SGVLMGKWHQAHSNC*GSGEETSTHAVAQR
Trigger: CCTCTGAGCGACTGCGTGTGTGCTGGTTTCCTCCCCCGACCCTCAGCAATTGCTGTGTGCCTGGTGCCATTTGCCCATGAGAACTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 90 bp AGCTTACCGTCGGGTGGTAAAGGTAAGAAATCCCGGTGCCTGGGCTaGGACCCTGCCCACTTCTGCCGTTACGAACCCTGTGCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SLPSGGKGKKSRCLG*DPAHFCRYEPCALE
Trigger: CTCAAGGGCACAGGGTTCGTAACGGCAGAAGTGGGCAGGGTCTCAGCCCAGGCACCGGGATTTCTTACCTTTACCACCCGACGGTAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp GAGATGTCCGAAGATGAGGCTCAGCTCTTCACATGCACCTGCTCCTaGAACGTCACAGCAGCCCTGTGCAGTAGGCATGGCTGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: EMSEDEAQLFTCTCS*NVTAALCSRHGCGP
Trigger: GGGACCACAGCCATGCCTACTGCACAGGGCTGCTGTGACGTTGCAGGAGCAGGTGCATGTGAAGAGCTGAGCCTCATCTTCGGACATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp CGCCAGGCACAGTTTCCTCTCTTGCGGAAGGGCAGTGGCCAACTCTaGTTCCTTCTGGCTTCAGGCAATCGGTGGGGACAGAACCAGCAA +
Preference number: 5 (lower is better)
Translates to: RQAQFPLLRKGSGQL*FLLASGNRWGQNQQ
Trigger: TTGCTGGTTCTGTCCCCACCGATTGCCTGAAGCCAGAAGGAAGCAGAGTTGGCCACTGCCCTTCCGCAAGAGAGGAAACTGTGCCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CAGGTCTTACCAGCACTCACAACCCACCCATTGCGGAAGCAGGTTTaGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGGTCGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: QVLPALTTHPLRKQV*RVRPNWSLRRGRCP
Trigger: TGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000531510.1
CDS CCA 90 bp AGGCTGGGCCCTGCTCTGGGACACACAGCATCGGGGGTTCCACAATaGAGCCTCAACTGTCCATCACCTGAGGACCTCTTTTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: RLGPALGHTASGVPQ*SLNCPSPEDLFCLP
Trigger: AGGCAGACAAAAGAGGTCCTCAGGTGATGGACAGTTGAGGCTCCATTGTGGAACCCCCGATGCTGTGTGTCCCAGAGCAGGGCCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp AGACCCAGGTATAGGAATGGATGCCAGCAAGGCTGGGCCCTGCTCTaGGACACACAGCATCGGGGGTTCCACAATGGAGCCTCAACTGTC +
Preference number: 5 (lower is better)
Translates to: RPRYRNGCQQGWALL*DTQHRGFHNGASTV
Trigger: GACAGTTGAGGCTCCATTGTGGAACCCCCGATGCTGTGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp AGAATTCCCTGGCTGGGTGTCCTGTGTGGTCGTGCTGAGCCCAGGGACAGGGAGTCAGTGAAGCCCTTCTaGCCCTCATTCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: RIPWLGVLCGRAEPRDRESVKPF*PSFTST
Trigger: AGTGCTGGTGAATGAGGGCAAGAAGGGCTTCACTGA...CTCCCTGTCCCTGGGCTCAGCACGACCACACAGGACACCCAGCCAGGGAATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGAACAACAGGTCAGAGGTATGTCTGATTaGGGGGCAGCTCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: WPSGLSGPGHAGWREQQVRGMSD*GAALGK
Trigger: CTTCCCGAGAGCTGCCCCCAAATCAGACATACCTCT...GACCTGTTGTTCTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp ACACCCCACCCTGGCCATCAGGTCTCTCGGGCCCTGGTCACGCTGGATGGAGAGATGAACCCTAGGTTTTaGGCTAAGAAGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TPHPGHQVSRALVTLDGEMNPRF*AKKVAS
Trigger: TGAGGCCACCTTCTTAGCCAAAAACCTAGGGTTCAT...CTCTCCATCCAGCGTGACCAGGGCCCGAGAGACCTGATGGCCAGGGTGGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 90 bp CTGCAGAATGAGCCGCAGGTTGACGGCAAATCCAGCCATGTCTATTaGAAATGGCCGGTGGGGGTCAAACACCGTCTTCCAGCCGACCAC +
Preference number: 5 (lower is better)
Translates to: LQNEPQVDGKSSHVY*KWPVGVKHRLPADH
Trigger: GTGGTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCATTTGCAATAGACATGGCTGGATTTGCCGTCAACCTGCGGCTCATTCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 90 bp TGTAGGGCCCAGGCCTGCCGTGGTCACAACTCCCATCCTGACACTTaGACCATATCTGTGACCAACCTCAGATCTCAGGCGTCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: CRAQACRGHNSHPDT*TISVTNLRSQASRQ
Trigger: TTGCCGAGACGCCTGAGATCTGAGGTTGGTCACAGATATGGTGCAAGTGTCAGGATGGGAGTTGTGACCACGGCAGGCCTGGGCCCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp ACTGAGGCCTTGAGAGGAAGTTTGGAGCCACTTTGTCCACCTCTCTaGCACCCAAATCATCCCAAGGCCGCAGAGGACCTGTGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: TEALRGSLEPLCPPL*HPNHPKAAEDLCPW
Trigger: CCAAGGGCACAGGTCCTCTGCGGCCTTGGGATGATTTGGGTGGCAGAGAGGTGGACAAAGTGGCTCCAAACTTCCTCTCAAGGCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp AATGAGCCGCAGGTTGACGGCAAATCCAGCCATGTCTATTGCAAATaGCCGGTGGGGGTCAAACACCGTCTTCCAGCCGACCACCTTCCC +
Preference number: 5 (lower is better)
Translates to: NEPQVDGKSSHVYCK*PVGVKHRLPADHLP
Trigger: GGGAAGGTGGTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCATTTGCAATAGACATGGCTGGATTTGCCGTCAACCTGCGGCTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 90 bp TCCTCATTACCAGCACTCACAACCCACCCATTGCGGAAGCAGGTTTaGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGGTCGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SSLPALTTHPLRKQV*RVRPNWSLRRGRCP
Trigger: TGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392580.5
CDS CCA 90 bp AGATTTAGCCTGTCCCTCCACACCCAGGCCACTGCTGGGGCTGCATaGGGCTGCGTGTCAAGACACGTTTTGGTTCTTTGGCCAAGACAC +
Preference number: 5 (lower is better)
Translates to: RFSLSLHTQATAGAA*GCVSRHVLVLWPRH
Trigger: GTGTCTTGGCCAAAGAACCAAAACGTGTCTTGACACGCAGCCCCATGCAGCCCCAGCAGTGGCCTGGGTGTGGAGGGACAGGCTAAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp TGCAGAGGGTCCACTGGTAGCATCTCTGGGAACCGTTCTCTCACATaGCAAGGACACTGGGCGAAGAGACCTCCTGACCGCCTTGGAAAC +
Preference number: 5 (lower is better)
Translates to: CRGSTGSISGNRSLT*QGHWAKRPPDRLGN
Trigger: GTTTCCAAGGCGGTCAGGAGGTCTCTTCGCCCAGTGTCCTTGCCATGTGAGAGAACGGTTCCCAGAGATGCTACCAGTGGACCCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp TTGGACAGTCCCCATACATTAGGGCACGGCTACTGCGTGTGCTCCTaGGCTTCGCCCTTCCCATTGGCTTCAGGGCGTCTGCAATTTTGG +
Preference number: 5 (lower is better)
Translates to: LDSPHTLGHGYCVCS*ASPFPLASGRLQFW
Trigger: CCAAAATTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp ACCAGCACACACGCAGTCGCTCAGAGGGGGCTGCTTAGAGGAGTCTaGGGTCAAACTGTGAGAAGAGCAACGTGGAAGAAAGCGGGATGG +
Preference number: 5 (lower is better)
Translates to: TSTHAVAQRGLLRGV*GQTVRRATWKKAGW
Trigger: CCATCCCGCTTTCTTCCACGTTGCTCTTCTCACAGTTTGACCCCAGACTCCTCTAAGCAGCCCCCTCTGAGCGACTGCGTGTGTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CCCGGAGTTCTCAAGCCCTCCAGTCAAGCGGGGCCTCTTCCCTCCTaGCCTTACGTAAGGCATTCTCTGAATCTCGGTGCAGAACTTCCT +
Preference number: 5 (lower is better)
Translates to: PGVLKPSSQAGPLPS*PYVRHSLNLGAELP
Trigger: AGGAAGTTCTGCACCGAGATTCAGAGAATGCCTTACGTAAGGCCAGGAGGGAAGAGGCCCCGCTTGACTGGAGGGCTTGAGAACTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAACGTGCAGCAGCGTGTaGGCCATGCGCGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSTCSSV*AMRVSS
Trigger: CGAGCTGACGCGCATGGCCAACACGCTGCTGCACGT...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCTTGGGCTCCAGGTCGTaGAGGGTGACAAGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: AGFCEAVECPHISSPPVPLGSRS*RVTSSR
Trigger: TCGAGAACTTGTCACCCTCAACGACCTGGAGCCCAA...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATGGACCCAGGATCTTGGTGCAGTaGGCTGCCTTGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SEGAGNRLGLENSGHHGPRILVQ*AALGSR
Trigger: CCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCCT...GGGTCCATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGATCTTGGTGCAGTaGGCTGCCTTGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGRILVQ*AALGSR
Trigger: CCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCCT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCTCAGTGAAGCCCTTCTaGCCCTCATTCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDASVKPF*PSFTST
Trigger: AGTGCTGGTGAATGAGGGCAAGAAGGGCTTCACTGA...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTACGCTGGAGCACCAGCTaGGCTGGTGCTGGACACCCC +
Preference number: 5 (lower is better)
Translates to: SKTALCSVNVNQRRATEVRWSTS*AGAGHP
Trigger: GGGGTGTCCAGCACCAGCCAAGCTGGTGCTCCAGCG...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CTCTCCCATGCCACCCCACTTGCTTCCAAGGGCTTGGTTTCCAAAGTGACATCCCCAGCCAAGCTGACCTaGGCACTTGGCTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSHATPLASKGLVSKVTSPAKLT*ALGWLL
Trigger: CAGAAGCCAGCCAAGTGCCAAGGTCAGCTTGGCTGG...GGATGTCACTTTGGAAACCAAGCCCTTGGAAGCAAGTGGGGTGGCATGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGGCAGGGGCTGCCACATaGAGGGGAGACAGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: WVKVNAWILSGGPVGRGLAGAAT*RGDSPP
Trigger: TGGAGGACTGTCTCCCCTCAATGTGGCAGCCCCTGC...CAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp CGGCAGGTGCTCCACGGGGACCTGGGTCATGCTGATTGCCCTCCTTaGCCTCGTCTTTACAATAGGGAGGTTGAGCTGGAAGTTTCAACG +
Preference number: 5 (lower is better)
Translates to: RQVLHGDLGHADCPP*PRLYNREVELEVST
Trigger: CGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAGCATGACCCAGGTCCCCGTGGAGCACCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp GGTGACCCTAACTTCACTCAGCTGCAGCTTTCATTCGCTTGCTCTTaGCATGCTCTGGGGAGACAGAATGCCAAGTCCCCAGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GDPNFTQLQLSFACS*HALGRQNAKSPASG
Trigger: GCCTGAGGCTGGGGACTTGGCATTCTGTCTCCCCAGAGCATGCCAAGAGCAAGCGAATGAAAGCTGCAGCTGAGTGAAGTTAGGGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTG +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVIAEAG*ESPAQL
Trigger: CAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAAT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACTGCCACACCAGGATCTaGGTGCAGTTGGCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDCHTRI*VQLAAL
Trigger: CAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGCA...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp AGCGCTCGTGATGCCCGTGGGCTGCTCTCTGGTCTTCAGAATTCCCTGGCTGGGATGAACCCTAGGTTTTaGGCTAAGAAGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SARDARGLLSGLQNSLAGMNPRF*AKKVAS
Trigger: TGAGGCCACCTTCTTAGCCAAAAACCTAGGGTTCAT...CCCAGCCAGGGAATTCTGAAGACCAGAGAGCAGCCCACGGGCATCACGAGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCATGGCTTCTAGGACCTaGGGTCAGGCAGAAGAATCA +
Preference number: 5 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAMASRT*GQAEES
Trigger: TGATTCTTCTGCCTGACCCAAGGTCCTAGAAGCCAT...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp CCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCTCGTGTCAAGACACGTTTaGGTTCTTTGGCCAAGACAC +
Preference number: 5 (lower is better)
Translates to: PGYFQVAQWEGDCGDDALVSRHV*VLWPRH
Trigger: GTGTCTTGGCCAAAGAACCAAAACGTGTCTTGACAC...GAGGGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp CAGAGCCTAGAACCCCACACGGGATGCCTGCTGGGTCTTGTGGTCTaGGATGCAAGTGACTTCATGCCACATCCCCCAGATTTAGCCTGT +
Preference number: 5 (lower is better)
Translates to: QSLEPHTGCLLGLVV*DASDFMPHPPDLAC
Trigger: ACAGGCTAAATCTGGGGGATGTGGCATGAAGTCACTTGCATCTCAGACCACAAGACCCAGCAGGCATCCCGTGTGGGGTTCTAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp TGGGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTTGGTGCTaGCTTCTTGTTTATCACACTGCCAGGTGGTATCATGCACGCTGC +
Preference number: 5 (lower is better)
Translates to: WGYRHSPPLSAWAWC*LLVYHTARWYHARC
Trigger: GCAGCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp GCAGCTTTCATTCGCTTGCTCTTGGCATGCTCTGGGGAGACAGAATaGCAAGTCCCCAGCCTCAGGCAGCACCATCAGTGCTTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: AAFIRLLLACSGETE*QVPSLRQHHQCLAN
Trigger: GTTTGCTAAGCACTGATGGTGCTGCCTGAGGCTGGGGACTTGGCATTCTGTCTCCCCAGAGCATGCCAAGAGCAAGCGAATGAAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp ACTGGTAGCATCTCTGGGAACCGTTCTCTCACATGGCAAGGACACTaGGCGAAGAGACCTCCTGACCGCCTTGGAAACTGTCACATCCTC +
Preference number: 5 (lower is better)
Translates to: TGSISGNRSLTWQGH*AKRPPDRLGNCHIL
Trigger: GAGGATGTGACAGTTTCCAAGGCGGTCAGGAGGTCTCTTCGCCCAGTGTCCTTGCCATGTGAGAGAACGGTTCCCAGAGATGCTACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp AGCAGCACGACTTCAGGCTGTGATTTTTGGACACTGCCTGCATCTTaGGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTTGGTGC +
Preference number: 5 (lower is better)
Translates to: SSTTSGCDFWTLPAS*GYRHSPPLSAWAWC
Trigger: GCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGTCGTGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CCACGGGCAGTGGGCTGCCGCAATGTTGAGCTTGGCCCTTCCTCATaGAAGCTTCAGGAACAGCTATGGGTTTGCAGGACTTGGTATTTG +
Preference number: 5 (lower is better)
Translates to: PRAVGCRNVELGPSS*KLQEQLWVCRTWYL
Trigger: CAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp AGTTTCCTCTCTTGCGGAAGGGCAGTGGCCAACTCTGCTTCCTTCTaGCTTCAGGCAATCGGTGGGGACAGAACCAGCAAGTCACACCAA +
Preference number: 5 (lower is better)
Translates to: SFLSCGRAVANSASF*LQAIGGDRTSKSHQ
Trigger: TTGGTGTGACTTGCTGGTTCTGTCCCCACCGATTGCCTGAAGCCAGAAGGAAGCAGAGTTGGCCACTGCCCTTCCGCAAGAGAGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAATCCAGCCATGTCTATaGCAAATGGCCGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGIQPCL*QMAGGG
Trigger: ACCCCCACCGGCCATTTGCAATAGACATGGCTGGAT...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GACATCCAGGGTGTAAGAGGTTGGGGAAAACGTCCTGCAAGGTGGCTCAGGGATAGAATGAGCCGCAGGTaGACGGCAAATCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: DIQGVRGWGKRPARWLRDRMSRR*TANPAM
Trigger: CATGGCTGGATTTGCCGTCAACCTGCGGCTCATTCT...ATCCCTGAGCCACCTTGCAGGACGTTTTCCCCAACCTCTTACACCCTGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGAATGAGCCGCAGGTaGACGGCAAATCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGRMSRR*TANPAM
Trigger: CATGGCTGGATTTGCCGTCAACCTGCGGCTCATTCT...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCCCCCGCTTGCACTGTaGTTTATACAAACTTCCCTA +
Preference number: 5 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAPPLAL*FIQTSL
Trigger: TAGGGAAGTTTGTATAAACAACAGTGCAAGCGGGGG...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGATCCCAGTGCCCAGTGTaGGATACGGACAGTACCTCA +
Preference number: 5 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGSQCPV*DTDSTS
Trigger: TGAGGTACTGTCCGTATCCAACACTGGGCACTGGGA...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGACCTCCTGACCGCCTaGGAAACTGTCACATCCTCT +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVDLLTA*ETVTSS
Trigger: AGAGGATGTGACAGTTTCCAAGGCGGTCAGGAGGTC...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp ATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGCCCAGGCTGTAAGACCTTaGCCAAGTCATTTCCGTTCT +
Preference number: 5 (lower is better)
Translates to: MPGYFQVAQWEGDCGDDAQAVRP*PSHFRS
Trigger: AGAACGGAAATGACTTGGCAAAGGTCTTACAGCCTG...GGCGTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp TTCTCTCCAAATTCTGTCCTTCCATCGGAAGGGCTCATGCACCAATaGCGGTGTGGCCCTCCTGTCCTAGCTTACCGTCGGGTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: FSPNSVLPSEGLMHQ*RCGPPVLAYRRVVK
Trigger: CTTTACCACCCGACGGTAAGCTAGGACAGGAGGGCCACACCGTCATTGGTGCATGAGCCCTTCCGATGGAAGGACAGAATTTGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp ACCTCTCTCTGCATGGGCTTGGTGCTGCCTTCTTGTTTATCACACTaGCAGGTGGTATCATGCACGCTGCAAACGAACAGCTGCCTGACC +
Preference number: 5 (lower is better)
Translates to: TSLCMGLVLPSCLSH*QVVSCTLQTNSCLT
Trigger: GGTCAGGCAGCTGTTCGTTTGCAGCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp TCTTGGGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTTGGTaGTGCCTTCTTGTTTATCACACTGCCAGGTGGTATCATGCACGC +
Preference number: 5 (lower is better)
Translates to: SWGYRHSPPLSAWAW*CLLVYHTARWYHAR
Trigger: GCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATATCCAGCCATGTCTATaGCAAATGGCCGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LASEGAGNRLGLENSGHHIQPCL*QMAGGG
Trigger: ACCCCCACCGGCCATTTGCAATAGACATGGCTGGAT...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CTTGCCAGCGAGGGAGCAGGGAACAGACTGGGTTTGGAAAACAGTGGTCATCATTTGGGCTCCAGGTCGTaGAGGGTGACAAGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LASEGAGNRLGLENSGHHLGSRS*RVTSSR
Trigger: TCGAGAACTTGTCACCCTCAACGACCTGGAGCCCAA...ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCCTGCTCCCTCGCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATATTGGGCTCCAGGTCGTaGAGGGTGACAAGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWILGSRS*RVTSSR
Trigger: TCGAGAACTTGTCACCCTCAACGACCTGGAGCCCAA...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GCTGGCTTCTGTGAGGCAGTAGAGTGCCCACACATAAGCTCACCACCTGTGCCCGGGAACAGACTGGGTTaGGAAAACAGTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: AGFCEAVECPHISSPPVPGNRLG*ENSGHH
Trigger: ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCC...GGGCACAGGTGGTGAGCTTATGTGTGGGCACTCTACTGCCTCACAGAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AGGTCTGTGGCTCTGAAGAGCTGCAGGAAAAGGCGCTTTCCCTCCCCAGTCCAGGGGAACAGACTGGGTTaGGAAAACAGTGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: RSVALKSCRKRRFPSPVQGNRLG*ENSGHH
Trigger: ATGATGACCACTGTTTTCCAAACCCAGTCTGTTCCC...CTGGACTGGGGAGGGAAAGCGCCTTTTCCTGCAGCTCTTCAGAGCCACAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp CGTCACTGCCAGCAGAAAAATCAGCAAGATGTTTGGAAGGTGACACCCTCTGAAGCTTCTGCCTGGGGCTaGGAGGAGGGCGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: RHCQQKNQQDVWKVTPSEASAWG*EEGGVC
Trigger: ACAAACACCGCCCTCCTCCAAGCCCCAGGCAGAAGC...TTCAGAGGGTGTCACCTTCCAAACATCTTGCTGATTTTTCTGCTGGCAGTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp AGAGTCTGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATAATGGTGGAGCTGGAATaGAGTCCAGGCCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: RVWWQKDPAAWVKVNAWIMVELE*SPGHLA
Trigger: AGCCAGATGGCCTGGACTCAATTCCAGCTCCACCAT...TATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCAGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGGTCAATAGGACATCCTaGTGGAGCACCGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWVNRTS*WSTALC
Trigger: GCACAGAGCGGTGCTCCACAAGGATGTCCTATTGAC...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGAGCTCCTCATTACCCATaGCGGAAGCAGGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGAPHYP*RKQVWR
Trigger: TCTCCAAACCTGCTTCCGCAATGGGTAATGAGGAGC...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp GAGCTTGGCCCTTCCTCATGGAAGCTTCAGGAACAGCTATGGGTTTaGAGGACTTGGTATTTGACTGTGAGGAGCAGCACGACTTCAGGC +
Preference number: 5 (lower is better)
Translates to: ELGPSSWKLQEQLWV*RTWYLTVRSSTTSG
Trigger: GCCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp GCATCTTGGGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTTaGTGCTGCCTTCTTGTTTATCACACTGCCAGGTGGTATCATGCA +
Preference number: 5 (lower is better)
Translates to: ASWGYRHSPPLSAWA*CCLLVYHTARWYHA
Trigger: TGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp GCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACAAGTGCTCCTGGTGTaGGTGCAGGTTCTAATACCA +
Preference number: 5 (lower is better)
Translates to: AWVKVNAWILSGGPVGRGQVLLV*VQVLIP
Trigger: TGGTATTAGAACCTGCACCAACACCAGGAGCACTTG...TCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGATGCCTGCTGGGTCTaGTGGTCTGAGATGCAAGTG +
Preference number: 5 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSDACWV*WSEMQV
Trigger: CACTTGCATCTCAGACCACAAGACCCAGCAGGCATC...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp GTAACTTGCCTGAGGTCAACCATTAGGAAATGGTGGAGCTGGAATTaGGTCCAGGCCATCTGGCTCTATGCTGTCATCGGGGGCATAGGA +
Preference number: 5 (lower is better)
Translates to: VTCLRSTIRKWWSWN*VQAIWLYAVIGGIG
Trigger: TCCTATGCCCCCGATGACAGCATAGAGCCAGATGGCCTGGACTCAATTCCAGCTCCACCATTTCCTAATGGTTGACCTCAGGCAAGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp CAGGACTTGGTATTTGACTGTGAGGAGCAGCACGACTTCAGGCTGTaGTTTTTGGACACTGCCTGCATCTTGGGGTTACAGGCACTCACC +
Preference number: 5 (lower is better)
Translates to: QDLVFDCEEQHDFRL*FLDTACILGLQALT
Trigger: GGTGAGTGCCTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 90 bp ATTCCAAGATTGCATCCTCAGTTCCTGAATGTGCTGACTTTCCTATaGAAAGGCGTCCCGACCCTCCCCTCCCTAGCCCTACTCATCTGG +
Preference number: 5 (lower is better)
Translates to: IPRLHPQFLNVLTFL*KGVPTLPSLALLIW
Trigger: CCAGATGAGTAGGGCTAGGGAGGGGAGGGTCGGGACGCCTTTTCATAGGAAAGTCAGCACATTCAGGAACTGAGGATGCAATCTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp AGAAACCACACCCATATCCTAAACCCACTGACTTTCTTCAGACTATaGAATTCTGGGCCAGCTCAGCTGCCGACAGTGCTTCGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: RNHTHILNPLTFFRL*NSGPAQLPTVLRPS
Trigger: GGAAGGGCGAAGCACTGTCGGCAGCTGAGCTGGCCCAGAATTGCATAGTCTGAAGAAAGTCAGTGGGTTTAGGATATGGGTGTGGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 90 bp ATTTTGGGTCCTAAAGGCCTCCTGGTGACCCTAACTTCACTCAGCTaGAGCTTTCATTCGCTTGCTCTTGGCATGCTCTGGGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ILGPKGLLVTLTSLS*SFHSLALGMLWGDR
Trigger: TCTGTCTCCCCAGAGCATGCCAAGAGCAAGCGAATGAAAGCTGCAGCTGAGTGAAGTTAGGGTCACCAGGAGGCCTTTAGGACCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp GTGTTTGTCTGTGGTCGCAGGCTGTCTCTAACAAGGACCCCAGAATaGCTTCTAGGACCTTGGGTCAGGCAGAAGAATCAGCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: VFVCGRRLSLTRTPE*LLGPWVRQKNQHKG
Trigger: ACCTTTGTGCTGATTCTTCTGCCTGACCCAAGGTCCTAGAAGCCATTCTGGGGTCCTTGTTAGAGACAGCCTGCGACCACAGACAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CACCCATATCCTAAACCCACTGACTTTCTTCAGACTATGCAATTCTaGGCCAGCTCAGCTGCCGACAGTGCTTCGCCCTTCCCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: HPYPKPTDFLQTMQF*ASSAADSASPFPSY
Trigger: ATAGGAAGGGAAGGGCGAAGCACTGTCGGCAGCTGAGCTGGCCCAGAATTGCATAGTCTGAAGAAAGTCAGTGGGTTTAGGATATGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp TGGTATTTGACTGTGAGGAGCAGCACGACTTCAGGCTGTGATTTTTaGACACTGCCTGCATCTTGGGGTTACAGGCACTCACCACCTCTC +
Preference number: 5 (lower is better)
Translates to: WYLTVRSSTTSGCDF*TLPASWGYRHSPPL
Trigger: GAGAGGTGGTGAGTGCCTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp AAATTCTGTCCTTCCATCGGAAGGGCTCATGCACCAATGACGGTGTaGCCCTCCTGTCCTAGCTTACCGTCGGGTGGTAAAGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: KFCPSIGRAHAPMTV*PSCPSLPSGGKGKK
Trigger: TTTCTTACCTTTACCACCCGACGGTAAGCTAGGACAGGAGGGCCACACCGTCATTGGTGCATGAGCCCTTCCGATGGAAGGACAGAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTACTCACAACCCACCCATaGCGGAAGCAGGTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SKTALCSVNVNQRRATEVLTTHP*RKQVWR
Trigger: TCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAG...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TCCAAGACAGCCTTATGCTCTGTAAACGTGAACCAGAGGAGAGCCACAGAGGTAAGAATGAGCCGCAGGTaGACGGCAAATCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SKTALCSVNVNQRRATEVRMSRR*TANPAM
Trigger: CATGGCTGGATTTGCCGTCAACCTGCGGCTCATTCT...TACCTCTGTGGCTCTCCTCTGGTTCACGTTTACAGAGCATAAGGCTGTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCAGGATCTTGGTGCAGTaGGCTGCCTTGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLDGENNRSGISVLKFSVRILVQ*AALGSR
Trigger: CCTGGAGCCCAAGGCAGCCAACTGCACCAAGATCCT...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp AAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACCCTCTCAGCCCCCGCTaGCACTGTTGTTTATACAAA +
Preference number: 5 (lower is better)
Translates to: KLMPGYFQVAQWEGDCGDPLSPR*HCCLYK
Trigger: TTTGTATAAACAACAGTGCAAGCGGGGGCTGAGAGG...GTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTTGGCCAAGACACGTTaGGATCTTAGGCCACATCTG +
Preference number: 5 (lower is better)
Translates to: VKVNAWILSGGPVGRGLWLAKTR*DLRPHL
Trigger: CAGATGTGGCCTAAGATCCAAACGTGTCTTGGCCAA...CCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp CCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAGTGGAAGACCAGGATTaGTCTTCCATTAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: PAAWVKVNAWILSGGPVGVEDQD*SSIKEH
Trigger: GTGCTCCTTAATGGAAGACAAATCCTGGTCTTCCAC...TCCCACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGAACAGAGTATACGTGTaGCCTTTTCTCTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVNRVYV*PFLCSL
Trigger: GAGGCTGCAGAGAAAAGGCAACACGTATACTCTGTT...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGTCAGCCGTTCTTCCTTaGAGAGTCCTCAGTGTGTAT +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVSAVLP*RVLSVY
Trigger: ATACACACTGAGGACTCTCAAAGGAAGAACGGCTGA...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp CCTGCCATTTTAGCAACTGGAGGTTACCATAGGGCTCTGCGAAGATaGAGGGATGTCCTATGTGAGGAAAGTGTAGCTCAGTGGGCACCT +
Preference number: 5 (lower is better)
Translates to: PAILATGGYHRALRR*RDVLCEESVAQWAP
Trigger: AGGTGCCCACTGAGCTACACTTTCCTCACATAGGACATCCCTTCATCTTCGCAGAGCCCTATGGTAACCTCCAGTTGCTAAAATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CTTTCTCAAGTGCTCCTGGTGTTGGTGCAGGTTCTAATACCAGGATaGAGAAAGCCAAGGAGAGAAGATGAGTGTCCTGCCAGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LSQVLLVLVQVLIPG*RKPRREDECPASSV
Trigger: GACTGAGCTGGCAGGACACTCATCTTCTCTCCTTGGCTTTCTCCATCCTGGTATTAGAACCTGCACCAACACCAGGAGCACTTGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCTGCCACACCAGGATCTaGGTGCAGTTGGCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: TLDGENNRSGISVLKFSVCHTRI*VQLAAL
Trigger: CAAGGCAGCCAACTGCACCAAGATCCTGGTGTGGCA...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACACACGTTTTGGTTCTTaGGCCAAGACACGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDTRFGS*AKTRLD
Trigger: ATCCAAACGTGTCTTGGCCAAAGAACCAAAACGTGT...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TTAATGCCTGGATACTTTCAGGTGGCCCAGTGGGAAGGGGACTGTGGTGACGACGGCACATGTGCAGGTTaGTTATGGGTCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: LMPGYFQVAQWEGDCGDDGTCAG*LWVILH
Trigger: ATGCAATATGACCCATAACAAACCTGCACATGTGCC...GTCGTCACCACAGTCCCCTTCCCACTGGGCCACCTGAAAGTATCCAGGCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp TCAGCCCCCGCTTGCACTGTTGTTTATACAAACTTCCCTATAGCATaGGAGATGTCCGAAGATGAGGCTCAGCTCTTCACATGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SAPACTVVYTNFPIA*EMSEDEAQLFTCTC
Trigger: GCAGGTGCATGTGAAGAGCTGAGCCTCATCTTCGGACATCTCTCATGCTATAGGGAAGTTTGTATAAACAACAGTGCAAGCGGGGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAACGTGCAGCAGCGTGTaGGCCATGCGCGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQTCSSV*AMRVSS
Trigger: CGAGCTGACGCGCATGGCCAACACGCTGCTGCACGT...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 90 bp GCCTCTTCCCTCCTGGCCTTACGTAAGGCATTCTCTGAATCTCGGTaGAGAACTTCCTATTTCACCGCATTTTATTCTCGTGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: ASSLLALRKAFSESR*RTSYFTAFYSRGFC
Trigger: GCAAAACCCACGAGAATAAAATGCGGTGAAATAGGAAGTTCTGCACCGAGATTCAGAGAATGCCTTACGTAAGGCCAGGAGGGAAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGTCCCATCCAGTCTTTTaGGTCAAAACATCTATGAGA +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVSHPVF*VKTSMR
Trigger: TCTCATAGATGTTTTGACCAAAAAGACTGGATGGGA...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp GACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTGGCCCAGTGCACTGTGGTTTCAATTaGCATTTTGGTGACAGTCTT +
Preference number: 5 (lower is better)
Translates to: DPAAWVKVNAWILSGGPVHCGFN*HFGDSL
Trigger: AAGACTGTCACCAAAATGCAAATTGAAACCACAGTG...CACTGGGCCACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGAGAATGCATCGTGTTaGGTTTTCTGTTCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSENASC*VFCSCV
Trigger: GACACAGGAACAGAAAACCAAACACGATGCATTCTC...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp TGTTGTTTATACAAACTTCCCTATAGCATGAGAGATGTCCGAAGATaGGGCTCAGCTCTTCACATGCACCTGCTCCTGCAACGTCACAGC +
Preference number: 5 (lower is better)
Translates to: CCLYKLPYSMRDVRR*GSALHMHLLLQRHS
Trigger: GCTGTGACGTTGCAGGAGCAGGTGCATGTGAAGAGCTGAGCCTCATCTTCGGACATCTCTCATGCTATAGGGAAGTTTGTATAAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp GACAGAGGACTTAATTCATCCTATGGGCAGTCAAGTTTTGGAAACTaGGGCCTTGAGAGGAAGTTTGGAGCCACTTTGTCCACCTCTCTG +
Preference number: 5 (lower is better)
Translates to: DRGLNSSYGQSSFGN*GLERKFGATLSTSL
Trigger: CAGAGAGGTGGACAAAGTGGCTCCAAACTTCCTCTCAAGGCCTCAGTTTCCAAAACTTGACTGCCCATAGGATGAATTAAGTCCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 90 bp CTGATTGCCCTCCTTGACCTCGTCTTTACAATAGGGAGGTTGAGCTaGAAGTTTCAACGATCCTGCCATTTTAGCAACTGGAGGTTACCA +
Preference number: 5 (lower is better)
Translates to: LIALLDLVFTIGRLS*KFQRSCHFSNWRLP
Trigger: TGGTAACCTCCAGTTGCTAAAATGGCAGGATCGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp TCTGCCGTTACGAACCCTGTGCCCTTGAGCAAGCTGCTTAGCTTCTaGCGCCTCAATTTCAGCAACTGTAAAATGGAGCTAATAATAGCA +
Preference number: 5 (lower is better)
Translates to: SAVTNPVPLSKLLSF*RLNFSNCKMELIIA
Trigger: TGCTATTATTAGCTCCATTTTACAGTTGCTGAAATTGAGGCGCCAGAAGCTAAGCAGCTTGCTCAAGGGCACAGGGTTCGTAACGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS-3UTR CAA 90 bp TGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCAGGTTTTACAATAGGGAGGTaGAGCTGGAAGTTTCAACGA +
Preference number: 5 (lower is better)
Translates to: WQKDPAAWVKVNAWILSGFTIGR*SWKFQR
Trigger: TCGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAA...ACCTGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAAAATAGGCAACCAATGCTAGAGCCTACCCCTTaGCCACTGCTGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: WSHEYCGRLNPSQNRQPMLEPTP*PLLEEK
Trigger: CTTCTCCTCCAGCAGTGGCAAAGGGGTAGGCTCTAG...CATTGGTTGCCTATTTTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp ACGCTGGATGGAGAGAACAACAGGTCTGGGATTTCTGTGCTTAAATTCTCTGTCAATTGTGCTTCCAACTaGCAGGAGAATGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: TLDGENNRSGISVLKFSVNCASN*QENEPD
Trigger: ATCCGGCTCATTCTCCTGCAAGTTGGAAGCACAATT...GACAGAGAATTTAAGCACAGAAATCCCAGACCTGTTGTTCTCTCCATCCAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS-3UTR CAA 90 bp TGGTGGCAGAAGGACCCAGCTGCGTGGGTGAAAGTTAATGCCTGGATACTTTCACTCTGTTTTAAGTTCTaGAGAGATCTCCAAATTGCT +
Preference number: 5 (lower is better)
Translates to: WWQKDPAAWVKVNAWILSLCFKF*RDLQIA
Trigger: AGCAATTTGGAGATCTCTCAAGAACTTAAAACAGAG...TGAAAGTATCCAGGCATTAACTTTCACCCACGCAGCTGGGTCCTTCTGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS-3UTR CAA 90 bp TCTGATTCCATCAGATGGTCTCATGAATACTGTGGGAGATTAAATCCATCTCAATCAGTGAAGCCCTTCTaGCCCTCATTCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: SDSIRWSHEYCGRLNPSQSVKPF*PSFTST
Trigger: AGTGCTGGTGAATGAGGGCAAGAAGGGCTTCACTGA...TTGAGATGGATTTAATCTCCCACAGTATTCATGAGACCATCTGATGGAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS TCA 90 bp TATGAGCATAGTACCCAACAGGGCGTTTTTCAGCCGTTCTTCCTTTaGGAGTCCTCAGTGTGTATTCTTCTCATGTTTACAGTCATGAGT +
Preference number: 5 (lower is better)
Translates to: YEHSTQQGVFQPFFL*ESSVCILLMFTVMS
Trigger: ACTCATGACTGTAAACATGAGAAGAATACACACTGAGGACTCTCAAAGGAAGAACGGCTGAAAAACGCCCTGTTGGGTACTATGCTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 90 bp CAAGTCATTTCCGTTCTCCATGCCACAGTTTTCCCATCTATAAAATaGGGCACTGTGGATCCCTACCTCATAAGGTCATTCTCAGAATTA +
Preference number: 5 (lower is better)
Translates to: QVISVLHATVFPSIK*GTVDPYLIRSFSEL
Trigger: TAATTCTGAGAATGACCTTATGAGGTAGGGATCCACAGTGCCCCATTTTATAGATGGGAAAACTGTGGCATGGAGAACGGAAATGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 90 bp CTTCCTATTTCACCGCATTTTATTCTCGTGGGTTTTGCCCATAGTTaGCAAGGTATATGTAGATCTAGCAGTCCTAGCAAGAGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LPISPHFILVGFAHS*QGICRSSSPSKRRN
Trigger: ATTTCTCCTCTTGCTAGGACTGCTAGATCTACATATACCTTGGCAACTATGGGCAAAACCCACGAGAATAAAATGCGGTGAAATAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 90 bp ATGTTTACAGTCATGAGTACCCAGTGTTTAGCTCTCACTCATAAGTaGGAATGCATCGTGTTTGGTTTTCTGTTCCTGTGTCAATTTGCT +
Preference number: 5 (lower is better)
Translates to: MFTVMSTQCLALTHK*ECIVFGFLFLCQFA
Trigger: AGCAAATTGACACAGGAACAGAAAACCAAACACGATGCATTCTCACTTATGAGTGAGAGCTAAACACTGGGTACTCATGACTGTAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp TGTTTTAAGTTCTTGAGAGATCTCCAAATTGCTTTCCATAGTGGCTaGACTAATTTACATTCCCACCAACAGAGTATACGTGTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: CFKFLRDLQIAFHSG*TNLHSHQQSIRVAF
Trigger: AAAGGCAACACGTATACTCTGTTGGTGGGAATGTAAATTAGTTCAGCCACTATGGAAAGCAATTTGGAGATCTCTCAAGAACTTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 90 bp AATAAACCCAGTTGTGCATTAATTACTCTGGAAGCCATTATGGCTTaGAAACCCCATAACTTTAATGGAGGCTATTATAAGCATAGTAGC +
Preference number: 5 (lower is better)
Translates to: NKPSCALITLEAIMA*KPHNFNGGYYKHSS
Trigger: GCTACTATGCTTATAATAGCCTCCATTAAAGTTATGGGGTTTTCAAGCCATAATGGCTTCCAGAGTAATTAATGCACAACTGGGTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp CGCGCAGCCAGCGCAGGGCCAGGTTGCGCTGCATGGTaGCCCGCGGGATGCGTGGGTCGCGGGCGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: RAASAGPGCAAW*PAGCVGRGRLR
Trigger: GCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 72 bp TGGACACCTGCGGCGACGAGTCCGGAGCGTCTCCGGTaGGGTCCATCGCGGGCAACGGCCCCTACGCCCCGG +
Preference number: 6 (lower is better)
Translates to: WTPAATSPERLR*GPSRATAPTPR
Trigger: CCGGGGCGTAGGGGCCGTTGCCCGCGATGGACCGCACCGGAGACGCTCCGGACTCGTCGCCGCAGGTGTCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000392580.5
CDS GCA 72 bp AAGGTCTCGCGCAGCCAGCGCAGGGCCAGGTTGCGCTaGATGGTGCCCCGCGGGATGCGTGGGTCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: KVSRSQRRARLR*MVPRGMRGSRA
Trigger: CGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGACCTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp TCTCGCGCAGCCAGCGCAGGGCCAGGTTGCGCTGCATaGTGCCCCGCGGGATGCGTGGGTCGCGGGCGTCTC +
Preference number: 6 (lower is better)
Translates to: SRAASAGPGCAA*CPAGCVGRGRL
Trigger: GAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 72 bp GGTCGGCGCCGGGCGGCGTTTCGCGTCGGGGGTCACTaGCCTCATCTGCGGAGTCGGGAGACCGGCGATGTG +
Preference number: 6 (lower is better)
Translates to: GRRRAAFRVGGH*PHLRSRETGDV
Trigger: CACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGTGACCCCCGACGCGAAACGCCGCCCGGCGCCGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp GCTGGGGCAGCACATGGGAGTGGGAGGGTGGCGGCCTaGACGTGTCCGGCAGGTGCTCCACGGGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: AGAAHGSGRVAA*TCPAGAPRGPG
Trigger: CCCAGGTCCCCGTGGAGCACCTGCCGGACACGTCCAGGCCGCCACCCTCCCACTCCCATGTGCTGCCCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp CTGGAGTTGCGCGGGAAGGTCTCGCGCAGCCAGCGCAGGGCCAGGTaGCGCTGCATGGTGCCCCGCGGGATGCGTGGGTCGCGGGCGTCT +
Preference number: 6 (lower is better)
Translates to: LELRGKVSRSQRRAR*RCMVPRGMRGSRAS
Trigger: AGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGCGCTGGCTGCGCGAGACCTTCCCGCGCAACTCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 72 bp GCAGGGCCAGGTTGCGCTGCATGGTGCCCCGCGGGATaGGTGGGTCGCGGGCGTCTCCGCGCAGCTTGTAGT +
Preference number: 6 (lower is better)
Translates to: AGPGCAAWCPAG*VGRGRLRAACS
Trigger: ACTACAAGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp CCTCCACGATGTCGCGGTCAGACGTGCAGTACTCCCTaGGGTCGGCGCCGGGCGGCGTTTCGCGTCGGGGGT +
Preference number: 6 (lower is better)
Translates to: PPRCRGQTCSTP*GRRRAAFRVGG
Trigger: ACCCCCGACGCGAAACGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGTCTGACCGCGACATCGTGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS CCA 72 bp GGCCAGGTTGCGCTGCATGGTGCCCCGCGGGATGCGTaGGTCGCGGGCGTCTCCGCGCAGCTTGTAGTTGCG +
Preference number: 6 (lower is better)
Translates to: GQVALHGAPRDA*VAGVSAQLVVA
Trigger: CGCAACTACAAGCTGCGCGGAGACGCCCGCGACCCACGCATCCCGCGGGGCACCATGCAGCGCAACCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp ACCGGCGATGTGGGAGGAGAGCGCCGGCTACGGCCCTaGATTCAGAGCGGGACGCCACCCACCCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: TGDVGGERRLRP*IQSGTPPTLPG
Trigger: CCCTGGCAGGGTGGGTGGCGTCCCGCTCTGAATCCAGGGCCGTAGCCGGCGCTCTCCTCCCACATCGCCGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp AGTTGCGGGGCGTCTCCACGTGCAGGTGCGTGTAGTTaGGGCCGGTGTCGCGCAGCAGGCGCGCGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: SCGASPRAGACS*GRCRAAGARSA
Trigger: CGCTGACCGCGCGCCTGCTGCGCGACACCGGCCTCAACTACACGCACCTGCACGTGGAGACGCCCCGCAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS GCA 72 bp CGGTGCGCACCACCTCCACGATGTCGCGGTCAGACGTaGAGTACTCCCTGGGGTCGGCGCCGGGCGGCGTTT +
Preference number: 6 (lower is better)
Translates to: RCAPPPRCRGQT*STPWGRRRAAF
Trigger: AAACGCCGCCCGGCGCCGACCCCAGGGAGTACTGCACGTCTGACCGCGACATCGTGGAGGTGGTGCGCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS GCA 72 bp GGGCGGCGTTTCGCGTCGGGGGTCACTGCCCTCATCTaGGGAGTCGGGAGACCGGCGATGTGGGAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: GRRFASGVTALI*GVGRPAMWEES
Trigger: GCTCTCCTCCCACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGTGACCCCCGACGCGAAACGCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp GGCGTCCGGCGCGGCGCATCCTCCACCACCAGCCAGTaGAGGTTGGGCACGTGCAGCAGCGTGTTGGCCATG +
Preference number: 6 (lower is better)
Translates to: GVRRGASSTTSQ*RLGTCSSVLAM
Trigger: CATGGCCAACACGCTGCTGCACGTGCCCAACCTCCACTGGCTGGTGGTGGAGGATGCGCCGCGCCGGACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp CTTCCAGCCGACCACCTTCCCTGCCCCGTTCACCCGTaGGGCCTCGTACCGCAGGCCACCCACGAAGGCGAC +
Preference number: 6 (lower is better)
Translates to: LPADHLPCPVHP*GLVPQATHEGD
Trigger: GTCGCCTTCGTGGGTGGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGCTGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp GGCTGGGCTAGCAGAGCACGTGGCACTGCCCCGCTGTaGTGTGGACGCCACAAAGCCCCAGGGCCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: GWASRARGTAPL*CGRHKAPGPQH
Trigger: GTGCTGCGGCCCTGGGGCTTTGTGGCGTCCACACCACAGCGGGGCAGTGCCACGTGCTCTGCTAGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp CGGACCATGGCGGGGGCCGCGTGTACACGTACTCGGTaGGCACCACCTCCACGATGTCGCGGTCAGACGTGC +
Preference number: 6 (lower is better)
Translates to: RTMAGAACTRTR*APPPRCRGQTC
Trigger: GCACGTCTGACCGCGACATCGTGGAGGTGGTGCGCACCGAGTACGTGTACACGCGGCCCCCGCCATGGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS GCA 72 bp GGGGTCAAACACCGTCTTCCAGCCGACCACCTTCCCTaGCCCGTTCACCCGTGGGGCCTCGTACCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GVKHRLPADHLP*PVHPWGLVPQA
Trigger: GGCCTGCGGTACGAGGCCCCACGGGTGAACGGGGCAGGGAAGGTGGTCGGCTGGAAGACGGTGTTTGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp CGTCACCACGTGGATGGTGGGCAGCGTGTCGGACCATaGCGGGGGCCGCGTGTACACGTACTCGGTGCGCAC +
Preference number: 6 (lower is better)
Translates to: RHHVDGGQRVGP*RGPRVHVLGAH
Trigger: GTGCGCACCGAGTACGTGTACACGCGGCCCCCGCCATGGTCCGACACGCTGCCCACCATCCACGTGGTGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
ENST00000531778.1
CDS CCA 72 bp TGTCGTCGTCGGCGAAGTAGACCACGCCAGGCTGGCTaGAGTTGCGCGGGAAGGTCTCGCGCAGCCAGCGCA +
Preference number: 6 (lower is better)
Translates to: CRRRRSRPRQAG*SCAGRSRAASA
Trigger: TGCGCTGGCTGCGCGAGACCTTCCCGCGCAACTCCAGCCAGCCTGGCGTGGTCTACTTCGCCGACGACGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CAA 90 bp CAGCCCAGCCAGCCTCACTGTGCCCACCCGTCCCAGTGCCCAGTGTaGGATACGGACAGTACCTCACCTGGGGGCCATGCTGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: QPSQPHCAHPSQCPV*DTDSTSPGGHAACS
Trigger: GGAGCAGGCAGCATGGCCCCCAGGTGAGGTACTGTCCGTATCCAACACTGGGCACTGGGACGGGTGGGCACAGTGAGGCTGGCTGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp TCCTCTGGCCTGGACCACAGCCACCCTCCTCTGCAATaGCTGCCCCCACTGCAGGGCCCTAGCACCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSGLDHSHPPLQ*LPPLQGPSTCL
Trigger: CAAGCAGGTGCTAGGGCCCTGCAGTGGGGGCAGCCATTGCAGAGGAGGGTGGCTGTGGTCCAGGCCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp ACTGCCCTCATCTGCGGAGTCGGGAGACCGGCGATGTaGGAGGAGAGCGCCGGCTACGGCCCTGGATTCAGA +
Preference number: 6 (lower is better)
Translates to: TALICGVGRPAM*EESAGYGPGFR
Trigger: TCTGAATCCAGGGCCGTAGCCGGCGCTCTCCTCCCACATCGCCGGTCTCCCGACTCCGCAGATGAGGGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp CTCCAAGGCTGGCTGCACCCACGGCTCCTCATTACCTaGGTGGCGGTAAGTTCAGGAGAGGGGCGGCCACGG +
Preference number: 6 (lower is better)
Translates to: LQGWLHPRLLIT*VAVSSGEGRPR
Trigger: CCGTGGCCGCCCCTCTCCTGAACTTACCGCCACTCAGGTAATGAGGAGCCGTGGGTGCAGCCAGCCTTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000531510.1
CDS GCA 72 bp GCGTCTCGGCAAGTAGAGACACAAAAGGCTGTGCCCTaGCCTCCCCGGGTGCCCTCAGAGCCTCAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: ASRQVETQKAVP*PPRVPSEPQRE
Trigger: TTCCCTCTGAGGCTCTGAGGGCACCCGGGGAGGGCAGGGCACAGCCTTTTGTGTCTCTACTTGCCGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp AGGCGCAGGGTGGGTAAGGGGCACACACAGGCCAAATaGTTCCTCTGGCCTGGACCACAGCCACCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: RRRVGKGHTQAK*FLWPGPQPPSS
Trigger: AGAGGAGGGTGGCTGTGGTCCAGGCCAGAGGAAGCATTTGGCCTGTGTGTGCCCCTTACCCACCCTGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp GGGGCCATGCTGCCTGCTCCTGCCCCAGCTCACGTGTaGTCACCATTTCAGGCAGAGTCGAGTGCTATGGCC +
Preference number: 6 (lower is better)
Translates to: GAMLPAPAPAHV*SPFQAESSAMA
Trigger: GGCCATAGCACTCGACTCTGCCTGAAATGGTGAGCACACGTGAGCTGGGGCAGGAGCAGGCAGCATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp CCATTGCGGAAGCAGGTTTGGAGAGTCCGGCCCAACTaGAGTCTGAGAAGGGGTCGCTGTCCAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PLRKQVWRVRPN*SLRRGRCPGAG
Trigger: CCCTGCCCCTGGACAGCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
CDS CCA 72 bp GGCCTGGACGTGTCCGGCAGGTGCTCCACGGGGACCTaGGTCATGCTGATTGCCCTCCTTGACCTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: GLDVSGRCSTGT*VMLIALLDLVF
Trigger: AAAGACGAGGTCAAGGAGGGCAATCAGCATGACCCAGGTCCCCGTGGAGCACCTGCCGGACACGTCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp AGCCTCACTGTGCCCACCCGTCCCAGTGCCCAGTGTTaGATACGGACAGTACCTCACCTGGGGGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SLTVPTRPSAQC*IRTVPHLGAML
Trigger: CAGCATGGCCCCCAGGTGAGGTACTGTCCGTATCCAACACTGGGCACTGGGACGGGTGGGCACAGTGAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp TCATCGGCAGCATGTGGGGTGTGTGGCACGCTAGCGTaGAGCTCATCTGAACGGACCCAGGAGGCCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSAACGVCGTLA*SSSERTQEACS
Trigger: CGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCACGCTAGCGTGCCACACACCCCACATGCTGCCGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp CAGCCTCACTGTGCCCACCCGTCCCAGTGCCCAGTGTaGGATACGGACAGTACCTCACCTGGGGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: QPHCAHPSQCPV*DTDSTSPGGHA
Trigger: AGCATGGCCCCCAGGTGAGGTACTGTCCGTATCCAACACTGGGCACTGGGACGGGTGGGCACAGTGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp AAGACAGGCGCCAAGTGCCAGCCACGGGCAGTGGGCTaGCGCAATGTTGAGCTTGGCCCTTCCTCATGGAAG +
Preference number: 6 (lower is better)
Translates to: KTGAKCQPRAVG*RNVELGPSSWK
Trigger: CTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp TCCTTATGTACCGCGAGCAGGGGTGCGAGGGTGCTCTaGTGCCAGACAGTGATGAGCAGAGTCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SLCTASRGARVL*CQTVMSRVQGS
Trigger: GCTGCCCTGGACTCTGCTCATCACTGTCTGGCACCAGAGCACCCTCGCACCCCTGCTCGCGGTACATAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531510.1
CDS CCA 72 bp TGCCAGCTCAGTCCCTGTGGGCCACTGCCTTTCCTTTaGGGCAGCCTCTCAGCCCCCGCTTGCACTGTTGTT +
Preference number: 6 (lower is better)
Translates to: CQLSPCGPLPFL*GSLSAPACTVV
Trigger: AACAACAGTGCAAGCGGGGGCTGAGAGGCTGCCCCAAAGGAAAGGCAGTGGCCCACAGGGACTGAGCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp TCAGGAAGACAGGCGCCAAGTGCCAGCCACGGGCAGTaGGCTGCCGCAATGTTGAGCTTGGCCCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: SGRQAPSASHGQ*AAAMLSLALPH
Trigger: ATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTCTTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CCCCATACATTAGGGCACGGCTACTGCGTGTGCTCCTaGGCTTCGCCCTTCCCATTGGCTTCAGGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: PHTLGHGYCVCS*ASPFPLASGRL
Trigger: CAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp AGACAGGCGCCAAGTGCCAGCCACGGGCAGTGGGCTGCCGCAATGTaGAGCTTGGCCCTTCCTCATGGAAGCTTCAGGAACAGCTATGGG +
Preference number: 6 (lower is better)
Translates to: RQAPSASHGQWAAAM*SLALPHGSFRNSYG
Trigger: CCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp GCCGTGGGGAGAGGATGGAAGGCCAAGAACAGGGTCTaGGGAGGAGGCTCCTGCATCCTGAGGCTCAGATCT +
Preference number: 6 (lower is better)
Translates to: AVGRGWKAKNRV*GGGSCILRLRS
Trigger: AGATCTGAGCCTCAGGATGCAGGAGCCTCCTCCTCAGACCCTGTTCTTGGCCTTCCATCCTCTCCCCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000531778.1
CDS TCA 72 bp CTGTGTCCGCCCGTAAACTCCTCTTTGCTGGCCCAGTaGGGGACAGAGCCTAGAACCCCACACGGGATGCCT +
Preference number: 6 (lower is better)
Translates to: LCPPVNSSLLAQ*GTEPRTPHGMP
Trigger: AGGCATCCCGTGTGGGGTTCTAGGCTCTGTCCCTCACTGGGCCAGCAAAGAGGAGTTTACGGGCGGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp GACAGTCCCCATACATTAGGGCACGGCTACTGCGTGTaGTCCTGGGCTTCGCCCTTCCCATTGGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: DSPHTLGHGYCV*SWASPFPLASG
Trigger: CCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp CCCTTGGACAGTCCCCATACATTAGGGCACGGCTACTaGGTGTGCTCCTGGGCTTCGCCCTTCCCATTGGCT +
Preference number: 6 (lower is better)
Translates to: PLDSPHTLGHGY*VCSWASPFPLA
Trigger: AGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CTGTCCCTCCACACCCAGGCCACTGCTGGGGCTGCATaGGGCTGCGTGTCAAGACACGTTTTGGTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: LSLHTQATAGAA*GCVSRHVLVLW
Trigger: CCAAAGAACCAAAACGTGTCTTGACACGCAGCCCCATGCAGCCCCAGCAGTGGCCTGGGTGTGGAGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp CCAAGTGCCAGCCACGGGCAGTGGGCTGCCGCAATGTaGAGCTTGGCCCTTCCTCATGGAAGCTTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: PSASHGQWAAAM*SLALPHGSFRN
Trigger: GTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp GCAGGTCTTACCAGCACTCACAACCCACCCATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGGTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: AGLTSTHNPPIAEAG*ESPAQLESEKGSLS
Trigger: GGACAGCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAAGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000531510.1
CDS CAA 90 bp GCGCCAAGTGCCAGCCACGGGCAGTGGGCTGCCGCAATGTTGAGCTaGGCCCTTCCTCATGGAAGCTTCAGGAACAGCTATGGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: APSASHGQWAAAMLS*ALPHGSFRNSYGFA
Trigger: TGCAAACCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp TTAGGGCACGGCTACTGCGTGTGCTCCTGGGCTTCGCCCTTCCCATaGGCTTCAGGGCGTCTGCAATTTTGGGTCCTAAAGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LGHGYCVCSWASPFP*ASGRLQFWVLKASW
Trigger: CCAGGAGGCCTTTAGGACCCAAAATTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCCGTGCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp TCTCTGCCACCCAAATCATCCCAAGGCCGCAGAGGACCTGTGCCCTaGGACAGTCCCCATACATTAGGGCACGGCTACTGCGTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLPPKSSQGRRGPVP*DSPHTLGHGYCVCS
Trigger: GGAGCACACGCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAAGGGCACAGGTCCTCTGCGGCCTTGGGATGATTTGGGTGGCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp CAAGTGCCAGCCACGGGCAGTGGGCTGCCGCAATGTTaGGCTTGGCCCTTCCTCATGGAAGCTTCAGGAACA +
Preference number: 6 (lower is better)
Translates to: QVPATGSGLPQC*AWPFLMEASGT
Trigger: TGTTCCTGAAGCTTCCATGAGGAAGGGCCAAGCTCAACATTGCGGCAGCCCACTGCCCGTGGCTGGCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp CTCATGGGCAAATGGCACCAGGCACACAGCAATTGCTaGGGGTCGGGGGAGGAAACCAGCACACACGCAGTC +
Preference number: 6 (lower is better)
Translates to: LMGKWHQAHSNC*GSGEETSTHAV
Trigger: GACTGCGTGTGTGCTGGTTTCCTCCCCCGACCCTCAGCAATTGCTGTGTGCCTGGTGCCATTTGCCCATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp AGGATGTCCCGTCTCTTCGGCATCTCCAAGGCTGGCTaGACCCACGGCTCCTCATTACCAGCACTCACAACC +
Preference number: 6 (lower is better)
Translates to: RMSRLFGISKAG*THGSSLPALTT
Trigger: GGTTGTGAGTGCTGGTAATGAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCGAAGAGACGGGACATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392580.5
CDS GCA 72 bp ACATGCACCTGCTCCTGCAACGTCACAGCAGCCCTGTaGAGTAGGCATGGCTGTGGTCCCTGTGGGTTCATC +
Preference number: 6 (lower is better)
Translates to: TCTCSCNVTAAL*SRHGCGPCGFI
Trigger: GATGAACCCACAGGGACCACAGCCATGCCTACTGCACAGGGCTGCTGTGACGTTGCAGGAGCAGGTGCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp GAAGCGGATAGCCAGAGACCCAGGTATAGGAATGGATaGCAGCAAGGCTGGGCCCTGCTCTGGGACACACAG +
Preference number: 6 (lower is better)
Translates to: EADSQRPRYRNG*QQGWALLWDTQ
Trigger: CTGTGTGTCCCAGAGCAGGGCCCAGCCTTGCTGGCATCCATTCCTATACCTGGGTCTCTGGCTATCCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp AGGATGTCCCGTCTCTTCGGCATCTCCAAGGCTGGCTaGACCCACGGCTCCTCATTACCCATTGCGGAAGCA +
Preference number: 6 (lower is better)
Translates to: RMSRLFGISKAG*THGSSLPIAEA
Trigger: TGCTTCCGCAATGGGTAATGAGGAGCCGTGGGTGCAGCCAGCCTTGGAGATGCCGAAGAGACGGGACATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp TCTGCCTGGGGCTTGGAGGAGGGCGGTGTTTGTCTGTaGTCGCAGGCTGTCTCTAACAAGGACCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: SAWGLEEGGVCL*SQAVSNKDPRM
Trigger: CATTCTGGGGTCCTTGTTAGAGACAGCCTGCGACCACAGACAAACACCGCCCTCCTCCAAGCCCCAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp ACCAGCACTCACAACCCACCCATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: TSTHNPPIAEAG*ESPAQLESEKG
Trigger: CCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000531510.1
CDS CAA 72 bp CACGGCTCCTCATTACCAGCACTCACAACCCACCCATaGCGGAAGCAGGTTTGGAGAGTCCGGCCCAACTGG +
Preference number: 6 (lower is better)
Translates to: HGSSLPALTTHP*RKQVWRVRPNW
Trigger: CCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAATGAGGAGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392580.5
CDS CAA 72 bp ACCCACGGCTCCTCATTACCCATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: THGSSLPIAEAG*ESPAQLESEKG
Trigger: CCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTAATGAGGAGCCGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp CCCAAATCATCCCAAGGCCGCAGAGGACCTGTGCCCTaGGACAGTCCCCATACATTAGGGCACGGCTACTGC +
Preference number: 6 (lower is better)
Translates to: PKSSQGRRGPVP*DSPHTLGHGYC
Trigger: GCAGTAGCCGTGCCCTAATGTATGGGGACTGTCCAAGGGCACAGGTCCTCTGCGGCCTTGGGATGATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp CATCCTGAGGCTCAGATCTCCACCGAGGGGTCAGTGAAGCCCTTCTaGCCCTCATTCACCAGCACTGGCTTCTCTGTCCGTGTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: HPEAQISTEGSVKPF*PSFTSTGFSVRVCH
Trigger: GTGGCACACACGGACAGAGAAGCCAGTGCTGGTGAATGAGGGCAAGAAGGGCTTCACTGACCCCTCGGTGGAGATCTGAGCCTCAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CAA 90 bp CTCCTCATTACCAGCACTCACAACCCACCCATTGCGGAAGCAGGTTaGGAGAGTCCGGCCCAACTGGAGTCTGAGAAGGGGTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LLITSTHNPPIAEAG*ESPAQLESEKGSLS
Trigger: GGACAGCGACCCCTTCTCAGACTCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAATGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392580.5
CDS CAA 90 bp GGGAAGTACGAGAGTGCCTTCCTCTTCCGTGTCAATAGGACATCCTaGTGGAGCACCGCTCTGTGCAGGACAGAGCACCAGGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GKYESAFLFRVNRTS*WSTALCRTEHQVLG
Trigger: GCCCAGCACCTGGTGCTCTGTCCTGCACAGAGCGGTGCTCCACAAGGATGTCCTATTGACACGGAAGAGGAAGGCACTCTCGTACTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp CTCCTGGGCTTCGCCCTTCCCATTGGCTTCAGGGCGTCTGCAATTTaGGGTCCTAAAGGCCTCCTGGTGACCCTAACTTCACTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LLGFALPIGFRASAI*GPKGLLVTLTSLSC
Trigger: GCAGCTGAGTGAAGTTAGGGTCACCAGGAGGCCTTTAGGACCCAAAATTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp CTCTTCAGGAGTTCTCATGGGCAAATGGCACCAGGCACACAGCAATaGCTGAGGGTCGGGGGAGGAAACCAGCACACACGCAGTCGCTCA +
Preference number: 6 (lower is better)
Translates to: LFRSSHGQMAPGTQQ*LRVGGGNQHTRSRS
Trigger: TGAGCGACTGCGTGTGTGCTGGTTTCCTCCCCCGACCCTCAGCAATTGCTGTGTGCCTGGTGCCATTTGCCCATGAGAACTCCTGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp TGCATCCTGAGGCTCAGATCTCCACCGAGGGGTCAGTaGAGCCCTTCTTGCCCTCATTCACCAGCACTGGCT +
Preference number: 6 (lower is better)
Translates to: CILRLRSPPRGQ*SPSCPHSPALA
Trigger: AGCCAGTGCTGGTGAATGAGGGCAAGAAGGGCTTCACTGACCCCTCGGTGGAGATCTGAGCCTCAGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS TCA 72 bp TCGGGTGGTAAAGGTAAGAAATCCCGGTGCCTGGGCTaGGACCCTGCCCACTTCTGCCGTTACGAACCCTGT +
Preference number: 6 (lower is better)
Translates to: SGGKGKKSRCLG*DPAHFCRYEPC
Trigger: ACAGGGTTCGTAACGGCAGAAGTGGGCAGGGTCTCAGCCCAGGCACCGGGATTTCTTACCTTTACCACCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp GCTAGCAGGTCTTACCAGCACTCACAACCCACCCATTaGGGAAGCAGGTTTGGAGAGTCCGGCCCAACTGGA +
Preference number: 6 (lower is better)
Translates to: ASRSYQHSQPTH*GSRFGESGPTG
Trigger: TCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAAGACCTGCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312527.9
ENST00000531510.1
CDS GCA 72 bp ACGGCTCCTCATTACCAGCACTCACAACCCACCCATTaGGGAAGCAGGTTTGGAGAGTCCGGCCCAACTGGA +
Preference number: 6 (lower is better)
Translates to: TAPHYQHSQPTH*GSRFGESGPTG
Trigger: TCCAGTTGGGCCGGACTCTCCAAACCTGCTTCCGCAATGGGTGGGTTGTGAGTGCTGGTAATGAGGAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392580.5
CDS GCA 72 bp TGCCAGGTGGTATCATGCACGCTGCAAACGAACAGCTaGCTGACCCCACGTGAGCCTGTGCATGTAAGTGGG +
Preference number: 6 (lower is better)
Translates to: CQVVSCTLQTNS*LTPREPVHVSG
Trigger: CCCACTTACATGCACAGGCTCACGTGGGGTCAGGCAGCTGTTCGTTTGCAGCGTGCATGATACCACCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp ATTCGCTTGCTCTTGGCATGCTCTGGGGAGACAGAATaGCAAGTCCCCAGCCTCAGGCAGCACCATCAGTGC +
Preference number: 6 (lower is better)
Translates to: IRLLLACSGETE*QVPSLRQHHQC
Trigger: GCACTGATGGTGCTGCCTGAGGCTGGGGACTTGGCATTCTGTCTCCCCAGAGCATGCCAAGAGCAAGCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp CTAGCGTGGAGCTCATCTGAACGGACCCAGGAGGCCTaGTCGTGGCTCTTCAGGAGTTCTCATGGGCAAATG +
Preference number: 6 (lower is better)
Translates to: LAWSSSERTQEA*SWLFRSSHGQM
Trigger: CATTTGCCCATGAGAACTCCTGAAGAGCCACGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCACGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CCAGGAGGCCTGCTCGTGGCTCTTCAGGAGTTCTCATaGGCAAATGGCACCAGGCACACAGCAATTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGGLLVALQEFS*ANGTRHTAIAE
Trigger: CTCAGCAATTGCTGTGTGCCTGGTGCCATTTGCCCATGAGAACTCCTGAAGAGCCACGAGCAGGCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp TGGAGCTCATCTGAACGGACCCAGGAGGCCTGCTCGTaGCTCTTCAGGAGTTCTCATGGGCAAATGGCACCA +
Preference number: 6 (lower is better)
Translates to: WSSSERTQEACS*LFRSSHGQMAP
Trigger: TGGTGCCATTTGCCCATGAGAACTCCTGAAGAGCCACGAGCAGGCCTCCTGGGTCCGTTCAGATGAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp TACCGTCGGGTGGTAAAGGTAAGAAATCCCGGTGCCTaGGCTGAGACCCTGCCCACTTCTGCCGTTACGAAC +
Preference number: 6 (lower is better)
Translates to: YRRVVKVRNPGA*AETLPTSAVTN
Trigger: GTTCGTAACGGCAGAAGTGGGCAGGGTCTCAGCCCAGGCACCGGGATTTCTTACCTTTACCACCCGACGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CCTTCCATCGGAAGGGCTCATGCACCAATGACGGTGTaGCCCTCCTGTCCTAGCTTACCGTCGGGTGGTAAA +
Preference number: 6 (lower is better)
Translates to: PSIGRAHAPMTV*PSCPSLPSGGK
Trigger: TTTACCACCCGACGGTAAGCTAGGACAGGAGGGCCACACCGTCATTGGTGCATGAGCCCTTCCGATGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp GGCTACTGCGTGTGCTCCTGGGCTTCGCCCTTCCCATaGGCTTCAGGGCGTCTGCAATTTTGGGTCCTAAAG +
Preference number: 6 (lower is better)
Translates to: GYCVCSWASPFP*ASGRLQFWVLK
Trigger: CTTTAGGACCCAAAATTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAAGCCCAGGAGCACACGCAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp AGTTCTCATGGGCAAATGGCACCAGGCACACAGCAATaGCTGAGGGTCGGGGGAGGAAACCAGCACACACGC +
Preference number: 6 (lower is better)
Translates to: SSHGQMAPGTQQ*LRVGGGNQHTR
Trigger: GCGTGTGTGCTGGTTTCCTCCCCCGACCCTCAGCAATTGCTGTGTGCCTGGTGCCATTTGCCCATGAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp ATGAGTGTCCTGCCAGCTCAGTCCCTGTGGGCCACTGCCTTTCCTTaGGGGCAGCCTCTCAGCCCCCGCTTGCACTGTTGTTTATACAAA +
Preference number: 6 (lower is better)
Translates to: MSVLPAQSLWATAFP*GQPLSPRLHCCLYK
Trigger: TTTGTATAAACAACAGTGCAAGCGGGGGCTGAGAGGCTGCCCCAAAGGAAAGGCAGTGGCCCACAGGGACTGAGCTGGCAGGACACTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp GAACCCCACACGGGATGCCTGCTGGGTCTTGTGGTCTaGGATGCAAGTGACTTCATGCCACATCCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: EPHTGCLLGLVV*DASDFMPHPPD
Trigger: ATCTGGGGGATGTGGCATGAAGTCACTTGCATCTCAGACCACAAGACCCAGCAGGCATCCCGTGTGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp CCCTGCCCACTTCTGCCGTTACGAACCCTGTGCCCTTaGGCAAGCTGCTTAGCTTCTGGCGCCTCAATTTCA +
Preference number: 6 (lower is better)
Translates to: PCPLLPLRTLCP*ASCLASGASIS
Trigger: TGAAATTGAGGCGCCAGAAGCTAAGCAGCTTGCTCAAGGGCACAGGGTTCGTAACGGCAGAAGTGGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp AATTCTGTCCTTCCATCGGAAGGGCTCATGCACCAATaGCGGTGTGGCCCTCCTGTCCTAGCTTACCGTCGG +
Preference number: 6 (lower is better)
Translates to: NSVLPSEGLMHQ*RCGPPVLAYRR
Trigger: CCGACGGTAAGCTAGGACAGGAGGGCCACACCGTCATTGGTGCATGAGCCCTTCCGATGGAAGGACAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp ATGTCCGAAGATGAGGCTCAGCTCTTCACATGCACCTaGTCCTGCAACGTCACAGCAGCCCTGTGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: MSEDEAQLFTCT*SCNVTAALCSR
Trigger: CCTACTGCACAGGGCTGCTGTGACGTTGCAGGAGCAGGTGCATGTGAAGAGCTGAGCCTCATCTTCGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp CACTCAGCTGCAGCTTTCATTCGCTTGCTCTTGGCATaGTCTGGGGAGACAGAATGCCAAGTCCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: HSAAAFIRLLLA*SGETECQVPSL
Trigger: GAGGCTGGGGACTTGGCATTCTGTCTCCCCAGAGCATGCCAAGAGCAAGCGAATGAAAGCTGCAGCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp ACGGCAAATCCAGCCATGTCTATTGCAAATGGCCGGTaGGGGTCAAACACCGTCTTCCAGCCGACCACCTTC +
Preference number: 6 (lower is better)
Translates to: TANPAMSIANGR*GSNTVFQPTTF
Trigger: GAAGGTGGTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCATTTGCAATAGACATGGCTGGATTTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp CAGGTTGACGGCAAATCCAGCCATGTCTATTGCAAATaGCCGGTGGGGGTCAAACACCGTCTTCCAGCCGAC +
Preference number: 6 (lower is better)
Translates to: QVDGKSSHVYCK*PVGVKHRLPAD
Trigger: GTCGGCTGGAAGACGGTGTTTGACCCCCACCGGCCATTTGCAATAGACATGGCTGGATTTGCCGTCAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312527.9
ENST00000392580.5
ENST00000524765.1
ENST00000531778.1
CDS CCA 72 bp CCTGCTCTGGGACACACAGCATCGGGGGTTCCACAATaGAGCCTCAACTGTCCATCACCTGAGGACCTCTTT +
Preference number: 6 (lower is better)
Translates to: PALGHTASGVPQ*SLNCPSPEDLF
Trigger: AAAGAGGTCCTCAGGTGATGGACAGTTGAGGCTCCATTGTGGAACCCCCGATGCTGTGTGTCCCAGAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp GAGAGTGCCTTCCTCTTCCGTGTCAATAGGACATCCTaGTGGAGCACCGCTCTGTGCAGGACAGAGCACCAG +
Preference number: 6 (lower is better)
Translates to: ESAFLFRVNRTS*WSTALCRTEHQ
Trigger: CTGGTGCTCTGTCCTGCACAGAGCGGTGCTCCACAAGGATGTCCTATTGACACGGAAGAGGAAGGCACTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp GGGTCCTCTCTCCAAATAGTTCTGACGCCTGTGGAAGACCAGGATTaGTCTTCCATTAAGGAGCACTGTGGTTTCCCGGGACGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: GSSLQIVLTPVEDQD*SSIKEHCGFPGRPA
Trigger: TGCCGGCCGTCCCGGGAAACCACAGTGCTCCTTAATGGAAGACAAATCCTGGTCTTCCACAGGCGTCAGAACTATTTGGAGAGAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp CTCCACGGGGACCTGGGTCATGCTGATTGCCCTCCTTaGCCTCGTCTTTACAATAGGGAGGTTGAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LHGDLGHADCPP*PRLYNREVELE
Trigger: TTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAGCATGACCCAGGTCCCCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp TCTCACATGGCAAGGACACTGGGCGAAGAGACCTCCTaGCCGCCTTGGAAACTGTCACATCCTCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SHMARTLGEETS*PPWKLSHPLLL
Trigger: GAGGAGAAGAGGATGTGACAGTTTCCAAGGCGGTCAGGAGGTCTCTTCGCCCAGTGTCCTTGCCATGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp ATCTCTGGGAACCGTTCTCTCACATGGCAAGGACACTaGGCGAAGAGACCTCCTGACCGCCTTGGAAACTGT +
Preference number: 6 (lower is better)
Translates to: ISGNRSLTWQGH*AKRPPDRLGNC
Trigger: ACAGTTTCCAAGGCGGTCAGGAGGTCTCTTCGCCCAGTGTCCTTGCCATGTGAGAGAACGGTTCCCAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp GGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTTaGTGCTGCCTTCTTGTTTATCACACTGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: GYRHSPPLSAWA*CCLLVYHTARW
Trigger: CCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CACGCAGTCGCTCAGAGGGGGCTGCTTAGAGGAGTCTaGGGTCAAACTGTGAGAAGAGCAACGTGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: HAVAQRGLLRGV*GQTVRRATWKK
Trigger: TTTCTTCCACGTTGCTCTTCTCACAGTTTGACCCCAGACTCCTCTAAGCAGCCCCCTCTGAGCGACTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp GGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTaGGTGCTGCCTTCTTGTTTATCACACTGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: GLQALTTSLCMG*VLPSCLSHCQV
Trigger: CACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp TTGCATCCTCAGTTCCTGAATGTGCTGACTTTCCTATaGAAAGGCGTCCCGACCCTCCCCTCCCTAGCCCTA +
Preference number: 6 (lower is better)
Translates to: LHPQFLNVLTFL*KGVPTLPSLAL
Trigger: TAGGGCTAGGGAGGGGAGGGTCGGGACGCCTTTTCATAGGAAAGTCAGCACATTCAGGAACTGAGGATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp AGCTCACGTGTGCTCACCATTTCAGGCAGAGTCGAGTaGTATGGCCGAGGAGGGTTTTTAGCCCCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: SSRVLTISGRVE*YGRGGFLAPEF
Trigger: AAACTCAGGGGCTAAAAACCCTCCTCGGCCATAGCACTCGACTCTGCCTGAAATGGTGAGCACACGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp CTGCCTTCTTGTTTATCACACTGCCAGGTGGTATCATaGACGCTGCAAACGAACAGCTGCCTGACCCCACGT +
Preference number: 6 (lower is better)
Translates to: LPSCLSHCQVVS*TLQTNSCLTPR
Trigger: ACGTGGGGTCAGGCAGCTGTTCGTTTGCAGCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp CCTAAAGGCCTCCTGGTGACCCTAACTTCACTCAGCTaGAGCTTTCATTCGCTTGCTCTTGGCATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PKGLLVTLTSLS*SFHSLALGMLW
Trigger: CCAGAGCATGCCAAGAGCAAGCGAATGAAAGCTGCAGCTGAGTGAAGTTAGGGTCACCAGGAGGCCTTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp TGTGGTCGCAGGCTGTCTCTAACAAGGACCCCAGAATaGCTTCTAGGACCTTGGGTCAGGCAGAAGAATCAG +
Preference number: 6 (lower is better)
Translates to: CGRRLSLTRTPE*LLGPWVRQKNQ
Trigger: CTGATTCTTCTGCCTGACCCAAGGTCCTAGAAGCCATTCTGGGGTCCTTGTTAGAGACAGCCTGCGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp CCTAAACCCACTGACTTTCTTCAGACTATGCAATTCTaGGCCAGCTCAGCTGCCGACAGTGCTTCGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PKPTDFLQTMQF*ASSAADSASPF
Trigger: GAAGGGCGAAGCACTGTCGGCAGCTGAGCTGGCCCAGAATTGCATAGTCTGAAGAAAGTCAGTGGGTTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp TTCGCCCTTCCCATTGGCTTCAGGGCGTCTGCAATTTaGGGTCCTAAAGGCCTCCTGGTGACCCTAACTTCA +
Preference number: 6 (lower is better)
Translates to: FALPIGFRASAI*GPKGLLVTLTS
Trigger: TGAAGTTAGGGTCACCAGGAGGCCTTTAGGACCCAAAATTGCAGACGCCCTGAAGCCAATGGGAAGGGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp CTGTGGGCCACTGCCTTTCCTTTGGGGCAGCCTCTCAGCCCCCGCTaGCACTGTTGTTTATACAAACTTCCCTATAGCATGAGAGATGTC +
Preference number: 6 (lower is better)
Translates to: LWATAFPLGQPLSPR*HCCLYKLPYSMRDV
Trigger: GACATCTCTCATGCTATAGGGAAGTTTGTATAAACAACAGTGCAAGCGGGGGCTGAGAGGCTGCCCCAAAGGAAAGGCAGTGGCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp ACAGGCACTCACCACCTCTCTCTGCATGGGCTTGGTGCTGCCTTCTaGTTTATCACACTGCCAGGTGGTATCATGCACGCTGCAAACGAA +
Preference number: 6 (lower is better)
Translates to: TGTHHLSLHGLGAAF*FITLPGGIMHAANE
Trigger: TTCGTTTGCAGCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp TGCATCTTGGGGTTACAGGCACTCACCACCTCTCTCTGCATGGGCTaGGTGCTGCCTTCTTGTTTATCACACTGCCAGGTGGTATCATGC +
Preference number: 6 (lower is better)
Translates to: CILGLQALTTSLCMG*VLPSCLSHCQVVSC
Trigger: GCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCAAGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp CTGAGGTCAACCATTAGGAAATGGTGGAGCTGGAATTaGGTCCAGGCCATCTGGCTCTATGCTGTCATCGGG +
Preference number: 6 (lower is better)
Translates to: LRSTIRKWWSWN*VQAIWLYAVIG
Trigger: CCCGATGACAGCATAGAGCCAGATGGCCTGGACTCAATTCCAGCTCCACCATTTCCTAATGGTTGACCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp TGCATGGGCTTGGTGCTGCCTTCTTGTTTATCACACTaGCAGGTGGTATCATGCACGCTGCAAACGAACAGC +
Preference number: 6 (lower is better)
Translates to: CMGLVLPSCLSH*QVVSCTLQTNS
Trigger: GCTGTTCGTTTGCAGCGTGCATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp AGGCACTCACCACCTCTCTCTGCATGGGCTTGGTGCTaGCTTCTTGTTTATCACACTGCCAGGTGGTATCAT +
Preference number: 6 (lower is better)
Translates to: RHSPPLSAWAWC*LLVYHTARWYH
Trigger: ATGATACCACCTGGCAGTGTGATAAACAAGAAGGCAGCACCAAGCCCATGCAGAGAGAGGTGGTGAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp TTAGCAAACAGCCTGACGTCTCCAGCGCTGGAGCTCTaGCAAGAACGCAATCGACACGATATCATGTCGCTT +
Preference number: 6 (lower is better)
Translates to: LANSLTSPALEL*QERNRHDIMSL
Trigger: AAGCGACATGATATCGTGTCGATTGCGTTCTTGGCAGAGCTCCAGCGCTGGAGACGTCAGGCTGTTTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp GTGCTCCTGGTGTTGGTGCAGGTTCTAATACCAGGATaGAGAAAGCCAAGGAGAGAAGATGAGTGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: VLLVLVQVLIPG*RKPRREDECPA
Trigger: GGCAGGACACTCATCTTCTCTCCTTGGCTTTCTCCATCCTGGTATTAGAACCTGCACCAACACCAGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp TTGAGGACAAAGAAGAGATGTTTCTGGGATGGTCCCTaGGGGGAAGTACGAGAGTGCCTTCCTCTTCCGTGT +
Preference number: 6 (lower is better)
Translates to: LRTKKRCFWDGP*GEVRECLPLPC
Trigger: ACACGGAAGAGGAAGGCACTCTCGTACTTCCCCCCAGGGACCATCCCAGAAACATCTCTTCTTTGTCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp ACTTCAGGCTGTGATTTTTGGACACTGCCTGCATCTTaGGGTTACAGGCACTCACCACCTCTCTCTGCATGG +
Preference number: 6 (lower is better)
Translates to: TSGCDFWTLPAS*GYRHSPPLSAW
Trigger: CCATGCAGAGAGAGGTGGTGAGTGCCTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp ACTGTGAGGAGCAGCACGACTTCAGGCTGTGATTTTTaGACACTGCCTGCATCTTGGGGTTACAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: TVRSSTTSGCDF*TLPASWGYRHS
Trigger: TGAGTGCCTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGTCGTGCTGCTCCTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp GTCTCTAACAAGGACCCCAGAATGGCTTCTAGGACCTaGGGTCAGGCAGAAGAATCAGCACAAAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: VSNKDPRMASRT*GQAEESAQRCR
Trigger: CCTGCACCTTTGTGCTGATTCTTCTGCCTGACCCAAGGTCCTAGAAGCCATTCTGGGGTCCTTGTTAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp CCTATGGGCAGTCAAGTTTTGGAAACTGAGGCCTTGAGAGGAAGTTaGGAGCCACTTTGTCCACCTCTCTGCCACCCAAATCATCCCAAG +
Preference number: 6 (lower is better)
Translates to: PMGSQVLETEALRGS*EPLCPPLCHPNHPK
Trigger: CTTGGGATGATTTGGGTGGCAGAGAGGTGGACAAAGTGGCTCCAAACTTCCTCTCAAGGCCTCAGTTTCCAAAACTTGACTGCCCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp CCTCTTCCTTCCCACCTTTGCAGCCCTCTAGCTATTTaGGCGCAGTTGCCCATATTCCAAGATTGCATCCTC +
Preference number: 6 (lower is better)
Translates to: PLPSHLCSPLAI*AQLPIFQDCIL
Trigger: GAGGATGCAATCTTGGAATATGGGCAACTGCGCTCAAATAGCTAGAGGGCTGCAAAGGTGGGAAGGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp TCCTGTGTCAATTTGCTCAGGATAATGGCCTCCAGCTaGATCCAGGCTGCTGCAAAGGCCATGATTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SCVNLLRIMASS*IQAAAKAMILS
Trigger: GGACAAAATCATGGCCTTTGCAGCAGCCTGGATGCAGCTGGAGGCCATTATCCTGAGCAAATTGACACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp CCTTCCTCATGGAAGCTTCAGGAACAGCTATGGGTTTaGAGGACTTGGTATTTGACTGTGAGGAGCAGCACG +
Preference number: 6 (lower is better)
Translates to: PSSWKLQEQLWV*RTWYLTVRSST
Trigger: CGTGCTGCTCCTCACAGTCAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAGCTTCCATGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp TCTCTAACAAGGACCCCAGAATGGCTTCTAGGACCTTaGGTCAGGCAGAAGAATCAGCACAAAGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: SLTRTPEWLLGP*VRQKNQHKGAG
Trigger: TCCTGCACCTTTGTGCTGATTCTTCTGCCTGACCCAAGGTCCTAGAAGCCATTCTGGGGTCCTTGTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp TGCATGGGGCTGCGTGTCAAGACACGTTTTGGTTCTTaGGCCAAGACACGTTTGGATCTTAGGCCACATCTG +
Preference number: 6 (lower is better)
Translates to: CMGLRVKTRFGS*AKTRLDLRPHL
Trigger: CAGATGTGGCCTAAGATCCAAACGTGTCTTGGCCAAAGAACCAAAACGTGTCTTGACACGCAGCCCCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp GTATTTGACTGTGAGGAGCAGCACGACTTCAGGCTGTaGTTTTTGGACACTGCCTGCATCTTGGGGTTACAG +
Preference number: 6 (lower is better)
Translates to: VFDCEEQHDFRL*FLDTACILGLQ
Trigger: CTGTAACCCCAAGATGCAGGCAGTGTCCAAAAATCACAGCCTGAAGTCGTGCTGCTCCTCACAGTCAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp ACAGACTGCAGAGACACCAGGTTTAAATCCCAACTGTaGCACCCACAGGCTGTAAGACCTTTGCCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: TDCRDTRFKSQL*HPQAVRPLPSH
Trigger: ATGACTTGGCAAAGGTCTTACAGCCTGTGGGTGGCACAGTTGGGATTTAAACCTGGTGTCTCTGCAGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp ACCCATATCCTAAACCCACTGACTTTCTTCAGACTATaGAATTCTGGGCCAGCTCAGCTGCCGACAGTGCTT +
Preference number: 6 (lower is better)
Translates to: THILNPLTFFRL*NSGPAQLPTVL
Trigger: AAGCACTGTCGGCAGCTGAGCTGGCCCAGAATTGCATAGTCTGAAGAAAGTCAGTGGGTTTAGGATATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp ACGAACCCTGTGCCCTTGAGCAAGCTGCTTAGCTTCTaGCGCCTCAATTTCAGCAACTGTAAAATGGAGCTA +
Preference number: 6 (lower is better)
Translates to: TNPVPLSKLLSF*RLNFSNCKMEL
Trigger: TAGCTCCATTTTACAGTTGCTGAAATTGAGGCGCCAGAAGCTAAGCAGCTTGCTCAAGGGCACAGGGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp CTTCAGGAACAGCTATGGGTTTGCAGGACTTGGTATTaGACTGTGAGGAGCAGCACGACTTCAGGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: LQEQLWVCRTWY*TVRSSTTSGCD
Trigger: ATCACAGCCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp ATGGAAGCTTCAGGAACAGCTATGGGTTTGCAGGACTaGGTATTTGACTGTGAGGAGCAGCACGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: MEASGTAMGLQD*VFDCEEQHDFR
Trigger: CCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAGCTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp ACCTCTTCCTTCCCACCTTTGCAGCCCTCTAGCTATTaGAGCGCAGTTGCCCATATTCCAAGATTGCATCCT +
Preference number: 6 (lower is better)
Translates to: TSSFPPLQPSSY*SAVAHIPRLHP
Trigger: AGGATGCAATCTTGGAATATGGGCAACTGCGCTCAAATAGCTAGAGGGCTGCAAAGGTGGGAAGGAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp TCTGATGACACAGACATAACCTCTTCCTTCCCACCTTaGCAGCCCTCTAGCTATTTGAGCGCAGTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: SDDTDITSSFPP*QPSSYLSAVAH
Trigger: ATGGGCAACTGCGCTCAAATAGCTAGAGGGCTGCAAAGGTGGGAAGGAAGAGGTTATGTCTGTGTCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp GTCATGCTGATTGCCCTCCTTGACCTCGTCTTTACAATAGGGAGGTaGAGCTGGAAGTTTCAACGATCCTGCCATTTTAGCAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: VMLIALLDLVFTIGR*SWKFQRSCHFSNWR
Trigger: CCTCCAGTTGCTAAAATGGCAGGATCGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAGGGCAATCAGCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp TTAGCAACTGGAGGTTACCATAGGGCTCTGCGAAGATaGAGGGATGTCCTATGTGAGGAAAGTGTAGCTCAG +
Preference number: 6 (lower is better)
Translates to: LATGGYHRALRR*RDVLCEESVAQ
Trigger: CTGAGCTACACTTTCCTCACATAGGACATCCCTTCATCTTCGCAGAGCCCTATGGTAACCTCCAGTTGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp TACAAACTTCCCTATAGCATGAGAGATGTCCGAAGATaGGGCTCAGCTCTTCACATGCACCTGCTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: YKLPYSMRDVRR*GSALHMHLLLQ
Trigger: TTGCAGGAGCAGGTGCATGTGAAGAGCTGAGCCTCATCTTCGGACATCTCTCATGCTATAGGGAAGTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp ATCCTATGGGCAGTCAAGTTTTGGAAACTGAGGCCTTaGGAGGAAGTTTGGAGCCACTTTGTCCACCTCTCT +
Preference number: 6 (lower is better)
Translates to: ILWAVKFWKLRP*EEVWSHFVHLS
Trigger: AGAGAGGTGGACAAAGTGGCTCCAAACTTCCTCTCAAGGCCTCAGTTTCCAAAACTTGACTGCCCATAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 72 bp GTCAAGACACGTTTTGGTTCTTTGGCCAAGACACGTTaGGATCTTAGGCCACATCTGATGAAGGATGGGGAG +
Preference number: 6 (lower is better)
Translates to: VKTRFGSLAKTR*DLRPHLMKDGE
Trigger: CTCCCCATCCTTCATCAGATGTGGCCTAAGATCCAAACGTGTCTTGGCCAAAGAACCAAAACGTGTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp AAATCCCAACTGTGCCACCCACAGGCTGTAAGACCTTaGCCAAGTCATTTCCGTTCTCCATGCCACAGTTTT +
Preference number: 6 (lower is better)
Translates to: KSQLCHPQAVRP*PSHFRSPCHSF
Trigger: AAAACTGTGGCATGGAGAACGGAAATGACTTGGCAAAGGTCTTACAGCCTGTGGGTGGCACAGTTGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp ACCAGGTTTAAATCCCAACTGTGCCACCCACAGGCTGTAAGACCTTaGCCAAGTCATTTCCGTTCTCCATGCCACAGTTTTCCCATCTAT +
Preference number: 6 (lower is better)
Translates to: TRFKSQLCHPQAVRP*PSHFRSPCHSFPIY
Trigger: ATAGATGGGAAAACTGTGGCATGGAGAACGGAAATGACTTGGCAAAGGTCTTACAGCCTGTGGGTGGCACAGTTGGGATTTAAACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp TCATGGAAGCTTCAGGAACAGCTATGGGTTTGCAGGACTTGGTATTaGACTGTGAGGAGCAGCACGACTTCAGGCTGTGATTTTTGGACA +
Preference number: 6 (lower is better)
Translates to: SWKLQEQLWVCRTWY*TVRSSTTSGCDFWT
Trigger: TGTCCAAAAATCACAGCCTGAAGTCGTGCTGCTCCTCACAGTCAAATACCAAGTCCTGCAAACCCATAGCTGTTCCTGAAGCTTCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CCA 72 bp CTCCTTGACCTCGTCTTTACAATAGGGAGGTTGAGCTaGAAGTTTCAACGATCCTGCCATTTTAGCAACTGG +
Preference number: 6 (lower is better)
Translates to: LLDLVFTIGRLS*KFQRSCHFSNW
Trigger: CCAGTTGCTAAAATGGCAGGATCGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp ATTGCCCTCCTTGACCTCGTCTTTACAATAGGGAGGTaGAGCTGGAAGTTTCAACGATCCTGCCATTTTAGC +
Preference number: 6 (lower is better)
Translates to: IALLDLVFTIGR*SWKFQRSCHFS
Trigger: GCTAAAATGGCAGGATCGTTGAAACTTCCAGCTCAACCTCCCTATTGTAAAGACGAGGTCAAGGAGGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp CTTAATTCATCCTATGGGCAGTCAAGTTTTGGAAACTaGGGCCTTGAGAGGAAGTTTGGAGCCACTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LNSSYGQSSFGN*GLERKFGATLS
Trigger: GGACAAAGTGGCTCCAAACTTCCTCTCAAGGCCTCAGTTTCCAAAACTTGACTGCCCATAGGATGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS CAA 90 bp TCGGTGCAGAACTTCCTATTTCACCGCATTTTATTCTCGTGGGTTTaGCCCATAGTTGCCAAGGTATATGTAGATCTAGCAGTCCTAGCA +
Preference number: 6 (lower is better)
Translates to: SVQNFLFHRILFSWV*PIVAKVYVDLAVLA
Trigger: TGCTAGGACTGCTAGATCTACATATACCTTGGCAACTATGGGCAAAACCCACGAGAATAAAATGCGGTGAAATAGGAAGTTCTGCACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp GCTTGCACTGTTGTTTATACAAACTTCCCTATAGCATaGGAGATGTCCGAAGATGAGGCTCAGCTCTTCACA +
Preference number: 6 (lower is better)
Translates to: ACTVVYTNFPIA*EMSEDEAQLFT
Trigger: TGTGAAGAGCTGAGCCTCATCTTCGGACATCTCTCATGCTATAGGGAAGTTTGTATAAACAACAGTGCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS TCA 72 bp AGTACCCAACAGGGCGTTTTTCAGCCGTTCTTCCTTTaGGAGTCCTCAGTGTGTATTCTTCTCATGTTTACA +
Preference number: 6 (lower is better)
Translates to: STQQGVFQPFFL*ESSVCILLMFT
Trigger: TGTAAACATGAGAAGAATACACACTGAGGACTCTCAAAGGAAGAACGGCTGAAAAACGCCCTGTTGGGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS GCA 72 bp ACAGTACACACCTTGCCTGCAAACACACTTTTCATATaGAAACTACCTGATCTAGAGCTCATACCCACTACC +
Preference number: 6 (lower is better)
Translates to: TVHTLPANTLFI*KLPDLELIPTT
Trigger: GGTAGTGGGTATGAGCTCTAGATCAGGTAGTTTGCATATGAAAAGTGTGTTTGCAGGCAAGGTGTGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp AACAATATACTCTCTGTGAAAGGGTTTAAAACACACTaGAGGCCAGAAATCCTATTCCTCCCCCACCATCCA +
Preference number: 6 (lower is better)
Translates to: NNILSVKGFKTH*RPEILFLPHHP
Trigger: TGGATGGTGGGGGAGGAATAGGATTTCTGGCCTGCAGTGTGTTTTAAACCCTTTCACAGAGAGTATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS GCA 72 bp TCACCGCATTTTATTCTCGTGGGTTTTGCCCATAGTTaGCAAGGTATATGTAGATCTAGCAGTCCTAGCAAG +
Preference number: 6 (lower is better)
Translates to: SPHFILVGFAHS*QGICRSSSPSK
Trigger: CTTGCTAGGACTGCTAGATCTACATATACCTTGGCAACTATGGGCAAAACCCACGAGAATAAAATGCGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp GTCATGAGTACCCAGTGTTTAGCTCTCACTCATAAGTaGGAATGCATCGTGTTTGGTTTTCTGTTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: VMSTQCLALTHK*ECIVFGFLFLC
Trigger: ACACAGGAACAGAAAACCAAACACGATGCATTCTCACTTATGAGTGAGAGCTAAACACTGGGTACTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CCA 72 bp CATTTTAGATTTGGGGGCACATGTGCAGGTTTGTTATaGGTCATATTGCATGTGATGCTGAGATCTGGAGTA +
Preference number: 6 (lower is better)
Translates to: HFRFGGTCAGLL*VILHVMLRSGV
Trigger: TACTCCAGATCTCAGCATCACATGCAATATGACCCATAACAAACCTGCACATGTGCCCCCAAATCTAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp TTTCAACATTTTAGATTTGGGGGCACATGTGCAGGTTaGTTATGGGTCATATTGCATGTGATGCTGAGATCT +
Preference number: 6 (lower is better)
Translates to: FQHFRFGGTCAG*LWVILHVMLRS
Trigger: AGATCTCAGCATCACATGCAATATGACCCATAACAAACCTGCACATGTGCCCCCAAATCTAAAATGTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 90 bp TGTCGCTTTATATATAGTAGTTTTAACCCCTCTGGAGTGATGTATTaGCAAGATAACAATGATTCTGAACTGACAAGCACAGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: CRFIYSSFNPSGVMY*QDNNDSELTSTEKR
Trigger: CCTCTTCTCTGTGCTTGTCAGTTCAGAATCATTGTTATCTTGCAAATACATCACTCCAGAGGGGTTAAAACTACTATATATAAAGCGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1
CDS TCA 72 bp AGTTGTGCATTAATTACTCTGGAAGCCATTATGGCTTaGAAACCCCATAACTTTAATGGAGGCTATTATAAG +
Preference number: 6 (lower is better)
Translates to: SCALITLEAIMA*KPHNFNGGYYK
Trigger: CTTATAATAGCCTCCATTAAAGTTATGGGGTTTTCAAGCCATAATGGCTTCCAGAGTAATTAATGCACAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524765.1
CDS CAA 72 bp ATATATAGTAGTTTTAACCCCTCTGGAGTGATGTATTaGCAAGATAACAATGATTCTGAACTGACAAGCACA +
Preference number: 6 (lower is better)
Translates to: IYSSFNPSGVMY*QDNNDSELTST
Trigger: TGTGCTTGTCAGTTCAGAATCATTGTTATCTTGCAAATACATCACTCCAGAGGGGTTAAAACTACTATATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531778.1