Pregenerated sensors for B3GALT9 (Homo sapiens)
Ensembl gene IDs: ENSG00000214654Ensembl transcript IDs: ENST00000437707.1, ENST00000464488.3, ENST00000645473.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCGGAGCGGACCCGGCCGCTGCAAGGCTCTGGCGGTCCGAGCGTaGCTAGTAGCTGTGAACCCGGCGCGAGGTCCCGGGCCCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSGPGRCKALAVRA*LVAVNPARGPGPRG Trigger: GCCCCGGGGCCCGGGACCTCGCGCCGGGTTCACAGCTACTAGGCACGCTCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCCGCTCCGCAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS TCA 90 bp | GGCGGGGACCGGAAGTGCAGCCGCTTCCGCCGGGAGCCGCGGAGCTaGGGGACGCGCGGAGATGACGCAGGCAGCACCGGAAGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGDRKCSRFRREPRS*GTRGDDAGSTGSRS Trigger: GGAGCGGCTTCCGGTGCTGCCTGCGTCATCTCCGCGCGTCCCTCAGCTCCGCGGCTCCCGGCGGAAGCGGCTGCACTTCCGGTCCCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS TCA 90 bp | CAGCCGCTTCCGCCGGGAGCCGCGGAGCTGAGGGACGCGCGGAGATaGCGCAGGCAGCACCGGAAGCCGCTCCCCTGTGAGGCTGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPLPPGAAELRDARR*RRQHRKPLPCEAAD Trigger: GTCCGCAGCCTCACAGGGGAGCGGCTTCCGGTGCTGCCTGCGTCATCTCCGCGCGTCCCTCAGCTCCGCGGCTCCCGGCGGAAGCGGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 90 bp | AACCCGGCGCGAGGTCCCGGGCCCCGGGGCGCTCGCTCAGGTCAGTaGCGCGCGGAACACGATTCCGAGAGCAAGGGACCTGGGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NPARGPGPRGARSGQ*RAEHDSESKGPGSN Trigger: GTTGCTCCCAGGTCCCTTGCTCTCGGAATCGTGTTCCGCGCGGCACTGACCTGAGCGAGCGCCCCGGGGCCCGGGACCTCGCGCCGGGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 90 bp | CCCGCCGCGCCTTGGCTGTTTTTCTTTCCCTGCAGGCGCCATGGCTaGGGAGCGGACCCGGCCGCTGCAAGGCTCTGGCGGTCCGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PAAPWLFFFPCRRHG*GADPAAARLWRSER Trigger: ACGCTCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCCGCTCCGCAGCCATGGCGCCTGCAGGGAAAGAAAAACAGCCAAGGCGCGGCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CCA 90 bp | CTGACCCGCCGCGCCTTGGCTGTTTTTCTTTCCCTGCAGGCGCCATaGCTGCGGAGCGGACCCGGCCGCTGCAAGGCTCTGGCGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTRRALAVFLSLQAP*LRSGPGRCKALAVR Trigger: TCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCCGCTCCGCAGCCATGGCGCCTGCAGGGAAAGAAAAACAGCCAAGGCGCGGCGGGTCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 90 bp | TTTCTTTCCCTGCAGGCGCCATGGCTGCGGAGCGGACCCGGCCGCTaGAAGGCTCTGGCGGTCCGAGCGTGCCTAGTAGCTGTGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLQAPWLRSGPGR*KALAVRACLVAVNP Trigger: CGGGTTCACAGCTACTAGGCACGCTCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCCGCTCCGCAGCCATGGCGCCTGCAGGGAAAGAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CCA 90 bp | TGCAAGATCAGATTGGAGGAGGGACATAAGCGCGCTGTGCAAACCTaGATGTACGGTACGAAAGGAACCTCCGTTCTAGGTTGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKIRLEEGHKRAVQT*MYGTKGTSVLGCTQ Trigger: CTGGGTGCAACCTAGAACGGAGGTTCCTTTCGTACCGTACATCCAGGTTTGCACAGCGCGCTTATGTCCCTCCTCCAATCTGATCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS CCA 90 bp | CGCGCGGAACACGATTCCGAGAGCAAGGGACCTGGGAGCAACGAATaGGTTGATGGGATCTGGATTTTAGAGACGGGAAAACAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAEHDSESKGPGSNE*VDGIWILETGKQGF Trigger: AAAACCCTGTTTTCCCGTCTCTAAAATCCAGATCCCATCAACCCATTCGTTGCTCCCAGGTCCCTTGCTCTCGGAATCGTGTTCCGCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CCA 90 bp | GAAACAGGCATTCCCAGAGCAAACAGTGTGAGAATGGGATGCCCTTaGACACTGGTCACATTGCCCCAAGTTTTCCTAATGAGGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ETGIPRANSVRMGCP*TLVTLPQVFLMRSR Trigger: ACGGGACCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCTGGGAATGCCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 90 bp | GTTACCGAAACAGGCATTCCCAGAGCAAACAGTGTGAGAATGGGATaGCCTTGGACACTGGTCACATTGCCCCAAGTTTTCCTAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTETGIPRANSVRMG*PWTLVTLPQVFLMR Trigger: CCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCTGGGAATGCCTGTTTCGGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 90 bp | TGTTCACTAACCCTATCCCCTAGAACAGCGTTCGGGATAAAGAGGTaGCCAACAGGTTGTATGAATTTGGACACGTCTCTTAACTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSLTLSPRTAFGIKR*PTGCMNLDTSLNFS Trigger: AGAGAAGTTAAGAGACGTGTCCAAATTCATACAACCTGTTGGGCACCTCTTTATCCCGAACGCTGTTCTAGGGGATAGGGTTAGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS GCA 90 bp | AATGAACAGGGCATTAGGGCAGAAAGCCACAGCCCACTGTATCATTaGAATGATCTTCAGGGTTTGGTTCTCAGAACTGTCCAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NEQGIRAESHSPLYH*NDLQGLVLRTVQED Trigger: ATCTTCTTGGACAGTTCTGAGAACCAAACCCTGAAGATCATTGCAATGATACAGTGGGCTGTGGCTTTCTGCCCTAATGCCCTGTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 90 bp | TTGCCTGTGAGCAACTTCAGGGTCTTAGAAATTATTGAGTCCAGGTaGCAATTATGCCCAAACGCATCTCAGGATCACTCTAGTCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVSNFRVLEIIESR*QLCPNASQDHSSLT Trigger: TGTTAGACTAGAGTGATCCTGAGATGCGTTTGGGCATAATTGGCACCTGGACTCAATAATTTCTAAGACCCTGAAGTTGCTCACAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464488.3 ENST00000645473.1 |
||
| CDS CCA 90 bp | AGCCACATCTTGGGACATTATAAAGGCCTCACCACTGCAGTAATCTaGGTAGTATTTTTCTGGGTACTCACTAAGAGGGACAAAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHILGHYKGLTTAVI*VVFFWVLTKRDKVS Trigger: AGAGACTTTGTCCCTCTTAGTGAGTACCCAGAAAAATACTACCCAGATTACTGCAGTGGTGAGGCCTTTATAATGTCCCAAGATGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 90 bp | AGCAACTTCAGGGTCTTAGAAATTATTGAGTCCAGGTGCCAATTATaGCCAAACGCATCTCAGGATCACTCTAGTCTAACAGCAATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SNFRVLEIIESRCQL*PNASQDHSSLTAIA Trigger: TGCAATTGCTGTTAGACTAGAGTGATCCTGAGATGCGTTTGGGCATAATTGGCACCTGGACTCAATAATTTCTAAGACCCTGAAGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464488.3 ENST00000645473.1 |
||
| CDS CCA 90 bp | CATTATAAAGGCCTCACCACTGCAGTAATCTGGGTAGTATTTTTCTaGGTACTCACTAAGAGGGACAAAGTCTCTGTTCTGAGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HYKGLTTAVIWVVFF*VLTKRDKVSVLRIS Trigger: AGAGATCCTCAGAACAGAGACTTTGTCCCTCTTAGTGAGTACCCAGAAAAATACTACCCAGATTACTGCAGTGGTGAGGCCTTTATAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 90 bp | ATAGCAACATCTGTTGTATCTAATGTGCCTTTTCCCAGAAAACCTTaGGCTGTGGATGGGTATAAGGCCAATGAACTTAGCACAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: IATSVVSNVPFPRKP*AVDGYKANELSTNS Trigger: GGAATTTGTGCTAAGTTCATTGGCCTTATACCCATCCACAGCTCAAGGTTTTCTGGGAAAAGGCACATTAGATACAACAGATGTTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CCA 90 bp | TATAAGGCCAATGAACTTAGCACAAATTCCTACAAACACATCAGCTaGCACCATCATGGGTACTTCTTTGAAAACCACATACATCATTCG | + |
|
Preference number: 5 (lower is better) Translates to: YKANELSTNSYKHIS*HHHGYFFENHIHHS Trigger: CGAATGATGTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTGTAGGAATTTGTGCTAAGTTCATTGGCCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CCA 90 bp | TGTTCTTCCCTTTACATATTTCTGACTGGCTCAGGACATAATATTTaGAGAGATTACTTCTTAGGGGTTCGATGTTCAATTTTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLYIFLTGSGHNI*RDYFLGVRCSIFLP Trigger: AGGCAAGAAAATTGAACATCGAACCCCTAAGAAGTAATCTCTCCAAATATTATGTCCTGAGCCAGTCAGAAATATGTAAAGGGAAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 72 bp | CCGCCGGGAGCCGCGGAGCTGAGGGACGCGCGGAGATaGCGCAGGCAGCACCGGAAGCCGCTCCCCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPGAAELRDARR*RRQHRKPLPCE Trigger: CTCACAGGGGAGCGGCTTCCGGTGCTGCCTGCGTCATCTCCGCGCGTCCCTCAGCTCCGCGGCTCCCGGCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS TCA 72 bp | CGGAAGTGCAGCCGCTTCCGCCGGGAGCCGCGGAGCTaGGGGACGCGCGGAGATGACGCAGGCAGCACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RKCSRFRREPRS*GTRGDDAGSTG Trigger: TCCGGTGCTGCCTGCGTCATCTCCGCGCGTCCCTCAGCTCCGCGGCTCCCGGCGGAAGCGGCTGCACTTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 72 bp | GGACCCGGCCGCTGCAAGGCTCTGGCGGTCCGAGCGTaGCTAGTAGCTGTGAACCCGGCGCGAGGTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGRCKALAVRA*LVAVNPARGPG Trigger: CCCGGGACCTCGCGCCGGGTTCACAGCTACTAGGCACGCTCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 72 bp | CGAGGTCCCGGGCCCCGGGGCGCTCGCTCAGGTCAGTaGCGCGCGGAACACGATTCCGAGAGCAAGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RGPGPRGARSGQ*RAEHDSESKGP Trigger: AGGTCCCTTGCTCTCGGAATCGTGTTCCGCGCGGCACTGACCTGAGCGAGCGCCCCGGGGCCCGGGACCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 72 bp | CTGCAGGCGCCATGGCTGCGGAGCGGACCCGGCCGCTaGAAGGCTCTGGCGGTCCGAGCGTGCCTAGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQAPWLRSGPGR*KALAVRACLVA Trigger: AGCTACTAGGCACGCTCGGACCGCCAGAGCCTTGCAGCGGCCGGGTCCGCTCCGCAGCCATGGCGCCTGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS GCA 72 bp | TGGATGTACGGTACGAAAGGAACCTCCGTTCTAGGTTaGACCCAGCCTAAGCACCGTGAGGGCCGCGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WMYGTKGTSVLG*TQPKHREGRAA Trigger: TGCCGCGCGGCCCTCACGGTGCTTAGGCTGGGTGCAACCTAGAACGGAGGTTCCTTTCGTACCGTACATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS TCA 72 bp | TTCCGAGAGCAAGGGACCTGGGAGCAACGAATGGGTTaGTGGGATCTGGATTTTAGAGACGGGAAAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FREQGTWEQRMG*WDLDFRDGKTG Trigger: CCCTGTTTTCCCGTCTCTAAAATCCAGATCCCATCAACCCATTCGTTGCTCCCAGGTCCCTTGCTCTCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CCA 72 bp | AGATTGGAGGAGGGACATAAGCGCGCTGTGCAAACCTaGATGTACGGTACGAAAGGAACCTCCGTTCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLEEGHKRAVQT*MYGTKGTSVLG Trigger: ACCTAGAACGGAGGTTCCTTTCGTACCGTACATCCAGGTTTGCACAGCGCGCTTATGTCCCTCCTCCAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS CAA 90 bp | CGAAACAGGCATTCCCAGAGCAAACAGTGTGAGAATGGGATGCCCTaGGACACTGGTCACATTGCCCCAAGTTTTCCTAATGAGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RNRHSQSKQCENGMP*DTGHIAPSFPNEVP Trigger: CGGGACCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCTGGGAATGCCTGTTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 72 bp | ACAGGCATTCCCAGAGCAAACAGTGTGAGAATGGGATaGCCTTGGACACTGGTCACATTGCCCCAAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TGIPRANSVRMG*PWTLVTLPQVF Trigger: GAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCTGGGAATGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CCA 72 bp | CACGATTCCGAGAGCAAGGGACCTGGGAGCAACGAATaGGTTGATGGGATCTGGATTTTAGAGACGGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HDSESKGPGSNE*VDGIWILETGK Trigger: TTTTCCCGTCTCTAAAATCCAGATCCCATCAACCCATTCGTTGCTCCCAGGTCCCTTGCTCTCGGAATCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CCA 72 bp | AAGAAAAACTACTGCAGAGCTGGTGCAAGATCAGATTaGAGGAGGGACATAAGCGCGCTGTGCAAACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KKNYCRAGARSD*RRDISALCKPG Trigger: TCCAGGTTTGCACAGCGCGCTTATGTCCCTCCTCCAATCTGATCTTGCACCAGCTCTGCAGTAGTTTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS CAA 72 bp | AGTGTGAGAATGGGATGCCCTTGGACACTGGTCACATaGCCCCAAGTTTTCCTAATGAGGTCCCGTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVRMGCPWTLVT*PQVFLMRSRLV Trigger: AACAAGACGGGACCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CAA 90 bp | AGAGCAAACAGTGTGAGAATGGGATGCCCTTGGACACTGGTCACATaGCCCCAAGTTTTCCTAATGAGGTCCCGTCTTGTTCCATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RANSVRMGCPWTLVT*PQVFLMRSRLVPFP Trigger: AGGAAATGGAACAAGACGGGACCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCCCATTCTCACACTGTTTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 72 bp | ACCCTATCCCCTAGAACAGCGTTCGGGATAAAGAGGTaGCCAACAGGTTGTATGAATTTGGACACGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLSPRTAFGIKR*PTGCMNLDTSL Trigger: AAGAGACGTGTCCAAATTCATACAACCTGTTGGGCACCTCTTTATCCCGAACGCTGTTCTAGGGGATAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437707.1 |
||
| CDS GCA 72 bp | AGGTATACAATAAAAAGGGACCCCTCATTCCTATTCTaGAGCTCTCCAGTTCTCTCTGGAGGCAACCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RYTIKRDPSFLF*SSPVLSGGNQG Trigger: ACCCTGGTTGCCTCCAGAGAGAACTGGAGAGCTGCAGAATAGGAATGAGGGGTCCCTTTTTATTGTATACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 72 bp | GGCATTAGGGCAGAAAGCCACAGCCCACTGTATCATTaGAATGATCTTCAGGGTTTGGTTCTCAGAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GIRAESHSPLYH*NDLQGLVLRTV Trigger: GACAGTTCTGAGAACCAAACCCTGAAGATCATTGCAATGATACAGTGGGCTGTGGCTTTCTGCCCTAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CCA 72 bp | GGCCTCACCACTGCAGTAATCTGGGTAGTATTTTTCTaGGTACTCACTAAGAGGGACAAAGTCTCTGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLTTAVIWVVFF*VLTKRDKVSVL Trigger: CAGAACAGAGACTTTGTCCCTCTTAGTGAGTACCCAGAAAAATACTACCCAGATTACTGCAGTGGTGAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 72 bp | CAAACACATCAGCTGGCACCATCATGGGTACTTCTTTaGAAACCACATACATCATTCGAGCCACATCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QTHQLAPSWVLL*KPHTSFEPHLG Trigger: CCCAAGATGTGGCTCGAATGATGTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CAA 72 bp | AAGCTTGGTAGATTGACAAACGTCTCTTCATCCACCTaGAGAATGAACAGGGCATTAGGGCAGAAAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KLGRLTNVSSST*RMNRALGQKAT Trigger: TGTGGCTTTCTGCCCTAATGCCCTGTTCATTCTCAAGGTGGATGAAGAGACGTTTGTCAATCTACCAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 72 bp | TCAACTTTTGAGGATAAGGTTTCTTGCCAATCAACCTaGGCTTTTATCCTAGAATACCTGCTGACTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STFEDKVSCQST*AFILEYLLTPG Trigger: GCCCGGAGTCAGCAGGTATTCTAGGATAAAAGCTCAGGTTGATTGGCAAGAAACCTTATCCTCAAAAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645473.1 |
||
| CDS CAA 72 bp | ACAAACACATCAGCTGGCACCATCATGGGTACTTCTTaGAAAACCACATACATCATTCGAGCCACATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TNTSAGTIMGTS*KTTYIIRATSW Trigger: CCAAGATGTGGCTCGAATGATGTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CAA 90 bp | CATGGGTACTTCTTTGAAAACCACATACATCATTCGAGCCACATCTaGGGACATTATAAAGGCCTCACCACTGCAGTAATCTGGGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: HGYFFENHIHHSSHI*GHYKGLTTAVIWVV Trigger: TACTACCCAGATTACTGCAGTGGTGAGGCCTTTATAATGTCCCAAGATGTGGCTCGAATGATGTATGTGGTTTTCAAAGAAGTACCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 72 bp | TCTGTTGTATCTAATGTGCCTTTTCCCAGAAAACCTTaGGCTGTGGATGGGTATAAGGCCAATGAACTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVSNVPFPRKP*AVDGYKANELS Trigger: GCTAAGTTCATTGGCCTTATACCCATCCACAGCTCAAGGTTTTCTGGGAAAAGGCACATTAGATACAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS GCA 72 bp | AGGGTCTTAGAAATTATTGAGTCCAGGTGCCAATTATaGCCAAACGCATCTCAGGATCACTCTAGTCTAACA | + |
|
Preference number: 6 (lower is better) Translates to: RVLEIIESRCQL*PNASQDHSSLT Trigger: TGTTAGACTAGAGTGATCCTGAGATGCGTTTGGGCATAATTGGCACCTGGACTCAATAATTTCTAAGACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464488.3 ENST00000645473.1 |
||
| CDS CAA 90 bp | CAAATTCCTACAAACACATCAGCTGGCACCATCATGGGTACTTCTTaGAAAACCACATACATCATTCGAGCCACATCTTGGGACATTATA | + |
|
Preference number: 6 (lower is better) Translates to: QIPTNTSAGTIMGTS*KTTYIIRATSWDII Trigger: TATAATGTCCCAAGATGTGGCTCGAATGATGTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTGTAGGAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS TCA 72 bp | AATAGGATGACATTAAATAGAATGAAACACCACTGGTaGGTCCGAAGTCTGCAGAAAGTCACTTGCATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NRMTLNRMKHHW*VRSLQKVTCML Trigger: CAACATGCAAGTGACTTTCTGCAGACTTCGGACTCACCAGTGGTGTTTCATTCTATTTAATGTCATCCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464488.3 ENST00000645473.1 |
||
| CDS TCA 72 bp | TCAACTTTTGAGGATAAGGTTTCTTGCCAATCAACCTaGGCTTTTATCCTAGAATACCTGCTGAATGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: STFEDKVSCQST*AFILEYLLNGF Trigger: AAAACCATTCAGCAGGTATTCTAGGATAAAAGCTCAGGTTGATTGGCAAGAAACCTTATCCTCAAAAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||
| CDS CAA 72 bp | CCTTCAATTATATCATTATTCTTACAGGATTCTTTGTaGATCTCTTTCTGGGTAGTTACCGAAACAGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PSIISLFLQDSL*ISFWVVTETGI Trigger: AATGCCTGTTTCGGTAACTACCCAGAAAGAGATCAACAAAGAATCCTGTAAGAATAATGATATAATTGAAGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464488.3 |
||