RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GALNT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162885

Ensembl transcript IDs: ENST00000313984.3, ENST00000366600.8, ENST00000494378.1, ENST00000612859.4, ENST00000635195.1, ENST00000635244.1, ENST00000635360.1, ENST00000635453.2, ENST00000675193.1, ENST00000675555.1, ENST00000676288.1

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTaGCACCTCCTGATTTGGGAAAGCACCAGGTCCCACAGTCCTGTG +
Preference number: 1 (lower is better)
Translates to: FKDNSVCGTTGEVWG*HLLIWESTRSHSPV
Trigger: CACAGGACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CCA 90 bp AATTATTTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTaGGGGTGGCACCTCCTGATTTGGGAAAGCACCAGGTCCCACAGT +
Preference number: 1 (lower is better)
Translates to: NYFKDNSVCGTTGEV*GWHLLIWESTRSHS
Trigger: ACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAAATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR TCA 90 bp AATAGAATTGAGAGTCCTCAAGTAAATCCTTACATCTACAGTCACTaGTTTTCAACAAATGGGTGCTGGGACAACTGGATATCCACATGC +
Preference number: 1 (lower is better)
Translates to: NRIESPQVNPYIYSH*FSTNGCWDNWISTC
Trigger: GCATGTGGATATCCAGTTGTCCCAGCACCCATTTGTTGAAAATCAGTGACTGTAGATGTAAGGATTTACTTGAGGACTCTCAATTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR CCA 90 bp TCCTCAAGTAAATCCTTACATCTACAGTCACTGATTTTCAACAAATaGGTGCTGGGACAACTGGATATCCACATGCAAAAGAATGAAGTT +
Preference number: 1 (lower is better)
Translates to: SSSKSLHLQSLIFNK*VLGQLDIHMQKNEV
Trigger: AACTTCATTCTTTTGCATGTGGATATCCAGTTGTCCCAGCACCCATTTGTTGAAAATCAGTGACTGTAGATGTAAGGATTTACTTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR GCA 90 bp GGTGTGTCTATGGCAGTATTAGTAACAGCTATTATTCTGATGGAATaGTTACAATATTGCAGGGACTGTACCAAGTGCTTTGTAAATATC +
Preference number: 1 (lower is better)
Translates to: GVSMAVLVTAIILME*LQYCRDCTKCFVNI
Trigger: GATATTTACAAAGCACTTGGTACAGTCCCTGCAATATTGTAAGCATTCCATCAGAATAATAGCTGTTACTAATACTGCCATAGACACACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR TCA 90 bp AAAGAAACTGACACACAGAGTACGTACTGTGCATTTCCATTTATGTaGAATGTTCAAAACAGGCAAATCCATAGAGAAAGAAAGTGCATC +
Preference number: 1 (lower is better)
Translates to: KETDTQSTYCAFPFM*NVQNRQIHRERKCI
Trigger: GATGCACTTTCTTTCTCTATGGATTTGCCTGTTTTGAACATTTCACATAAATGGAAATGCACAGTACGTACTCTGTGTGTCAGTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR TCA 90 bp ATAATTATCCTAATTAGCTCTACAGAGCTATCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTACTACTACAGATTTCTGAACTAGGC +
Preference number: 1 (lower is better)
Translates to: IIILISSTELSCNPG*NSNSQLLLQISELG
Trigger: GCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAATTAGGATAATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR TCA 90 bp AGAGTATCATTCTGGTTTATTCAGATTAAGAAAGAAATACACTACTaGAATGGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTG +
Preference number: 1 (lower is better)
Translates to: RVSFWFIQIKKEIHY*NGMKLTVKGHLGPL
Trigger: CAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACCATTTCAGTAGTGTATTTCTTTCTTAATCTGAATAAACCAGAATGATACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGGCTGATCCTTGGGTTTaGAAGGCCAAGCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALADPWV*KAKPRV
Trigger: GACCCTGGGCTTGGCCTTCCAAACCCAAGGATCAGC...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 90 bp CAAAGAAGAAACAGGGTAGGAGAAAGCACTGAGTCAGCCTGTGCCTaGAAGGCAGCTGCTGATCCTTGGGTTTGGAAGGCCAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QRRNRVGESTESACA*KAAADPWVWKAKPR
Trigger: CCTGGGCTTGGCCTTCCAAACCCAAGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACTCAGTGCTTTCTCCTACCCTGTTTCTTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 2 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCGGTAGGAGAAAGCACTaGGTCAGCCTGTGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPGRRKH*VSLCLE
Trigger: TTCAAGGCACAGGCTGACTCAGTGCTTTCTCCTACC...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGCTTGAAGGCAGCTGCTaGTCCTTGGGTTTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQLEGSC*SLGLEG
Trigger: GCCTTCCAAACCCAAGGATCAGCAGCTGCCTTCAAG...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGAGACTAATGGGAGACTaGCACAGAGCTAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALRLMGD*HRARIS
Trigger: AGAGATCCTAGCTCTGTGTCAGTCTCCCATTAGTCT...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR GCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 2 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TGGGGGTGGCACCTCCTGATTTGGGAAAGCACCAGGTCCCACAGTCCTGTGGCTACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 2 (lower is better)
Translates to: WGWHLLIWESTRSHSPVATLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...AGCCACAGGACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR GCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 2 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCCTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 2 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCAAGTCCCTGTTATCTTaGTTGACATCGACAAGGATC +
Preference number: 2 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPKSLLS*LTSTRI
Trigger: GATCCTTGTCGATGTCAAGCAAGATAACAGGGACTT...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
3UTR-3UTR CCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACACTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACAGGCTACAGTGAGCTGTaGTCATGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTGYSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCATGATCACAGCTCACTGTAGCC...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCAGGCTACAGTGAGCTGTaGTCATGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPGYSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCATGATCACAGCTCACTGTAGCC...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAGTCAGCCTGTGCCTTaGAGGCAGCTGCTGATCCTT +
Preference number: 2 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCISQPVP*RQLLIL
Trigger: AAGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGACTGCTTATCGTGTCTaGGGTTCACCGGAAATAAAT +
Preference number: 2 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQTAYRV*GSPEIN
Trigger: ATTTATTTCCGGTGAACCCCAGACACGATAAGCAGT...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATAGTCTTGCCCCTCAGTaGGATGGAAAGGAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: SDLHSDYRLPALILDSANSLAPQ*DGKESL
Trigger: GAGAGACTCCTTTCCATCCCACTGAGGGGCAAGACT...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACATTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACTGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 2 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675193.1
3UTR-3UTR TCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATTCCCACGGAGAATACTaGGGAGAAGACAGCATTCCT +
Preference number: 2 (lower is better)
Translates to: SDLHSDYRLPALILDSANSHGEY*GEDSIP
Trigger: AGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGA...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 2 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATTCTACTGCTAAACCCTaGGACTCCTCAGACTTGCAC +
Preference number: 2 (lower is better)
Translates to: SDLHSDYRLPALILDSANSTAKP*DSSDLH
Trigger: GTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGA...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTGATACAGCCAGGCGCTaGGCTCATGCTTGTAATCCC +
Preference number: 2 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIDTARR*AHACNP
Trigger: GGGATTACAAGCATGAGCCCAGCGCCTGGCTGTATC...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 2 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 2 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCGCAGCTGCTGATCCTTaGGTTTGGAAGGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: LFPTIIPKLSISSSVITSAAADP*VWKAKP
Trigger: GGGCTTGGCCTTCCAAACCCAAGGATCAGCAGCTGC...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp AATTATTTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTGGAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: NYFKDNSVCGTTGEVWGWSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...CCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAAATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAAAGGTCAAGGCTACAGTaGGCTGTGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQRSRLQ*AVIMPL
Trigger: CAGTGGCATGATCACAGCTCACTGTAGCCTTGACCT...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 2 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR GCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACCCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 2 (lower is better)
Translates to: NSQLLLQISELGQVLTKNPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675193.1
3UTR-3UTR TCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACATGTAAAGTGGGCTGCTaGTTTAGAAAACAACCTGGC +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTCKVGC*FRKQPG
Trigger: GCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACA...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp CTGTGGAATACAGAAACAAGGCGGTGTGTGGATGAAGAGTTAGTCAACAAATGCCAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 2 (lower is better)
Translates to: LWNTETRRCVDEELVNKCQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...GCATTTGTTGACTAACTCTTCATCCACACACCGCCTTGTTTCTGTATTCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR GCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACAGGCCTCCTCTTGTTCTaGCTGATAAAGTTTGACAGT +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTGLLLF*LIKFDS
Trigger: ACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCC...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR TCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: SDLHSDYRLPALILDSANSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR TCA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTGTGACTTGGGTAAAATaGAAGATACAGCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISVTWVK*KIQPGA
Trigger: AGCGCCTGGCTGTATCTTTCATTTTACCCAAGTCAC...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR GCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: SDLHSDYRLPALILDSANRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 2 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAATGTCTGTCTCAGTCTTaGCCCTCAGTGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPECLSQS*PSVGWK
Trigger: TTTCCATCCCACTGAGGGGCAAGACTGAGACAGACA...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 2 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACATGGCCAATAAGCACATaGAGAAAATGCTCAACATCA +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTWPIST*RKCSTS
Trigger: TGATGTTGAGCATTTTCTTCATGTGCTTATTGGCCA...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 2 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 2 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR GCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAGATACAGCTATCATTaGAATGATACTGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLRYSYH*NDTVVS
Trigger: TGAGACCACAGTATCATTGCAATGATAGCTGTATCT...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACACAAAATGGACAGACCTaGAACACATGTTACAGCAAA +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTQNGQT*NTCYSK
Trigger: TTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTG...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCCCCCAAATGAACAGGTaGTACAAGACTCAGGCTTTC +
Preference number: 2 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISPQMNR*YKTQAF
Trigger: GAAAGCCTGAGTCTTGTACCACCTGTTCATTTGGGG...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: CNDTVVSSHELVLQVTVITKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR TCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTTGTGGTCTCATCACATaGGCTAGTTTTACAGGTAAC +
Preference number: 2 (lower is better)
Translates to: CNDTVVSSHELVLQVTVICGLIT*ASFTGN
Trigger: GTTACCTGTAAAACTAGCTCATGTGATGAGACCACA...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR TCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTAAAGATATACAAATaGCTCTCTCTCCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLKIYK*LSLPSF
Trigger: AAAGGAGGGGAGAGAGAGTCATTTGTATATCTTTAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACAAAATGTAAAGTGGGCTaGTGCTTTAGAAAACAACCT +
Preference number: 2 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTKCKVG*CFRKQP
Trigger: AGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTT...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR GCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 2 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR GCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACCCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 2 (lower is better)
Translates to: NSQLLLQISELGQVLTKNPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675193.1
3UTR-3UTR CCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTACTGCTTATCGTGTCTaGGGTTCACCGGAAATAAAT +
Preference number: 2 (lower is better)
Translates to: CNDTVVSSHELVLQVTVITAYRV*GSPEIN
Trigger: ATTTATTTCCGGTGAACCCCAGACACGATAAGCAGT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR CCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCTCTAAATGGAGACCATaGGTCTGTTTGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLSKWRP*VCLFDF
Trigger: AAAATCAAACAAACAGACCCATGGTCTCCATTTAGA...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR CCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACTCTAAATGGAGACCATaGGTCTGTTTGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDSKWRP*VCLFDF
Trigger: AAAATCAAACAAACAGACCCATGGTCTCCATTTAGA...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPETKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: LFPTIIPKLSISSSVITSTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAACAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 2 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACCAAAATGGACAGACCTaGAACACATGTTACAGCAAA +
Preference number: 2 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDQNGQT*NTCYSK
Trigger: TTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTG...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAACTGATACATACAAAATaGACAGACCTGGAACACATG +
Preference number: 2 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQLIHTK*TDLEHM
Trigger: CATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAG...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCATATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAAC +
Preference number: 2 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPYGNVK*AAALEN
Trigger: GTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATA...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CCA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCACTGCTTATCGTGTCTaGGGTTCACCGGAAATAAAT +
Preference number: 2 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISTAYRV*GSPEIN
Trigger: ATTTATTTCCGGTGAACCCCAGACACGATAAGCAGT...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR TCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: LFPTIIPKLSISSSVITSSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATATCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 2 (lower is better)
Translates to: HMLFPTIIPKLSISSSVISCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAATATTTCCTAGCTACGTaGATTGGTTTCTATTTCCAG +
Preference number: 2 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEYFLAT*IGFYFQ
Trigger: CTGGAAATAGAAACCAATTCACGTAGCTAGGAAATA...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 90 bp ACTAGAAATGATTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTATGTATAACAATATGCTATTATCTG +
Preference number: 2 (lower is better)
Translates to: TRNDLVGHFGKCPLN*GRHPLLCITICYYL
Trigger: CAGATAATAGCATATTGTTATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAATCATTTCTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
3UTR-3UTR TCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: HMLFPTIIPKLSISSSVITTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR GCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAACAGAGTACGTACTGTaGATTTCCATTTATGTGAAA +
Preference number: 2 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQTEYVL*ISIYVK
Trigger: TTTCACATAAATGGAAATGCACAGTACGTACTCTGT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR-3UTR CCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAAACCTTTATAAAGCATaGCTCAACTCCGTGATCAAA +
Preference number: 2 (lower is better)
Translates to: HMLFPTIIPKLSISSSVINLYKA*LNSVIK
Trigger: TTTGATCACGGAGTTGAGCCATGCTTTATAAAGGTT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CAA 90 bp TGGGGGTGGCACCTCCTGATTTGGGAAAGCACCAGGTCCCACAGTCCTGTGGCTGAGTCAGCCTGTGCCTaGAAGGCAGCTGCTGATCCT +
Preference number: 3 (lower is better)
Translates to: WGWHLLIWESTRSHSPVAESACA*KAAADP
Trigger: AGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACTC...AGCCACAGGACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CCA 72 bp AACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTaGCACCTCCTGATTTGGGAAAGCACCAGGTCCCAC +
Preference number: 3 (lower is better)
Translates to: NSVCGTTGEVWG*HLLIWESTRSH
Trigger: GTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CCA 72 bp CACACTCAGCTTGTCTGTCTCAGTCTTGCCCCTCAGTaGGATGGAAAGGAGTCTCTCTCCCCTCAGTGCCTA +
Preference number: 3 (lower is better)
Translates to: HTQLVCLSLAPQ*DGKESLSPQCL
Trigger: TAGGCACTGAGGGGAGAGAGACTCCTTTCCATCCCACTGAGGGGCAAGACTGAGACAGACAAGCTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CCA 72 bp TTTGGGAAAGCACCAGGTCCCACAGTCCTGTGGCTGTaGAATACAGAAACAAGGCGGTGTGTGGATGAAGAG +
Preference number: 3 (lower is better)
Translates to: FGKAPGPTVLWL*NTETRRCVDEE
Trigger: CTCTTCATCCACACACCGCCTTGTTTCTGTATTCCACAGCCACAGGACTGTGGGACCTGGTGCTTTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CAA 90 bp CCTCCTGATTTGGGAAAGCACCAGGTCCCACAGTCCTGTGGCTGTGGAATACAGTTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: PPDLGKHQVPQSCGCGIQLRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...CTGTATTCCACAGCCACAGGACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CAA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGGGCACTTAGGTCCGTaGGCTCCGTTTCCCACAGTT +
Preference number: 3 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTGHLGP*APFPTV
Trigger: AACTGTGGGAAACGGAGCCAACGGACCTAAGTGCCC...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR CCA 72 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTaGCACCCTAATTTTACAGAGGGGGAACTAAGGCCA +
Preference number: 3 (lower is better)
Translates to: WRRWKGPCRSFS*HPNFTEGELRP
Trigger: TGGCCTTAGTTCCCCCTCTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 3 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCAAGTCCCTGTTATCTaGCTTGACATCGACAAGGAT +
Preference number: 3 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPQVPVI*LDIDKD
Trigger: ATCCTTGTCGATGTCAAGCAAGATAACAGGGACTTG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: PWDSSDLHSDYRLPALILLRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 3 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 3 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 3 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACACAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 3 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CAA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 3 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 3 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CAA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR CCA 72 bp ACAGTTACACATGATGTAATTACAGAATGGCGGCGCTaGAAGGGACCTTGTAGATCATTTAGTTGGCACCCT +
Preference number: 3 (lower is better)
Translates to: TVTHDVITEWRR*KGPCRSFSWHP
Trigger: AGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCATTCTGTAATTACATCATGTGTAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 3 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACCAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR CAA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 3 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 3 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 3 (lower is better)
Translates to: SDLHSDYRLPALILDSANHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 3 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTNPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCTTGCTTGCCAGCCACTaGACGATGTCCTTGGAGATC +
Preference number: 3 (lower is better)
Translates to: LFPTIIPKLSISSSVITSLLASH*TMSLEI
Trigger: GATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAA...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675193.1
3UTR-3UTR CAA 90 bp TTAACCACTAGACTATTTCCTAGCTACGTGAATTGGTTTCTATTTCCAGCAATGTTGTCTGTCTCAGTCTaGCCCCTCAGTGGGATGGAA +
Preference number: 3 (lower is better)
Translates to: LTTRLFPSYVNWFLFPAMLSVSV*PLSGME
Trigger: TTCCATCCCACTGAGGGGCAAGACTGAGACAGACAA...CATTGCTGGAAATAGAAACCAATTCACGTAGCTAGGAAATAGTCTAGTGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR TCA 72 bp CTAATTACTTACTTGGGTAAAGTGACTTGGGTAAAATaGAAGATACAGCCAGGCGCTGGGCTCATGCTTGTA +
Preference number: 3 (lower is better)
Translates to: LITYLGKVTWVK*KIQPGAGLMLV
Trigger: TACAAGCATGAGCCCAGCGCCTGGCTGTATCTTTCATTTTACCCAAGTCACTTTACCCAAGTAAGTAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR CCA 72 bp CTAGAATCCTCATATACTGACTATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAACAACCTGGCAGTGCCT +
Preference number: 3 (lower is better)
Translates to: LESSYTDYGNVK*AAALENNLAVP
Trigger: AGGCACTGCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATAGTCAGTATATGAGGATTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR-3UTR CAA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACGGAATGCTTACAATATaGCAGGGACTGTACCAAGTG +
Preference number: 3 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYGMLTI*QGLYQV
Trigger: CACTTGGTACAGTCCCTGCAATATTGTAAGCATTCC...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR TCA 72 bp GAGAGTCCTCAAGTAAATCCTTACATCTACAGTCACTaGTTTTCAACAAATGGGTGCTGGGACAACTGGATA +
Preference number: 3 (lower is better)
Translates to: ESPQVNPYIYSH*FSTNGCWDNWI
Trigger: TATCCAGTTGTCCCAGCACCCATTTGTTGAAAATCAGTGACTGTAGATGTAAGGATTTACTTGAGGACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR TCA 72 bp TGGAAGTGCAAGAGACCCAGAATAGCCAATCAAGCTTaGAAAAGAACAAGGTTGGAGGATTCACATTTCCTA +
Preference number: 3 (lower is better)
Translates to: WKCKRPRIANQA*KRTRLEDSHFL
Trigger: TAGGAAATGTGAATCCTCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTATTCTGGGTCTCTTGCACTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR GCA 72 bp ACAAGGCGGTGTGTGGATGAAGAGTTAGTCAACAAATaGCATTCCGTAATGAACGATTTTAGAAACCACAAG +
Preference number: 3 (lower is better)
Translates to: TRRCVDEELVNK*HSVMNDFRNHK
Trigger: CTTGTGGTTTCTAAAATCGTTCATTACGGAATGGCATTTGTTGACTAACTCTTCATCCACACACCGCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CAA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 3 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATATGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 3 (lower is better)
Translates to: HMLFPTIIPKLSISSSVIWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATATTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: HMLFPTIIPKLSISSSVILRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 3 (lower is better)
Translates to: SDLHSDYRLPALILDSANNPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 3 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR-3UTR CAA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAACGAATGGACTTTTCTaGTCTTTTGATAGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCITNGLF*SFDRLH
Trigger: ATGGAGCCTATCAAAAGACAAGAAAAGTCCATTCGT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
3UTR TCA 72 bp CTGGCAGTGCCTCAAGTGATTAAACACACAATTATATaGCCCAGGTCTTCTACTCCTAGACATTTAAGAGAA +
Preference number: 3 (lower is better)
Translates to: LAVPQVIKHTII*PRSSTPRHLRE
Trigger: TTCTCTTAAATGTCTAGGAGTAGAAGACCTGGGTCATATAATTGTGTGTTTAATCACTTGAGGCACTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR GCA 72 bp TCAACAAATGGGTGCTGGGACAACTGGATATCCACATaGAAAAGAATGAAGTTAAACCTCTATTTCATGCCA +
Preference number: 3 (lower is better)
Translates to: STNGCWDNWIST*KRMKLNLYFMP
Trigger: TGGCATGAAATAGAGGTTTAACTTCATTCTTTTGCATGTGGATATCCAGTTGTCCCAGCACCCATTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR-3UTR CAA 90 bp AATCAAAATATCCACTATTTACCACAACCCGTCTTTGGAAAGAAGTTCATAGTGCAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: NQNIHYLPQPVFGKKFIVQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...CACTATGAACTTCTTTCCAAAGACGGGTTGTGGTAAATAGTGGATATTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATACAAGTCCCTGTTATCTaGCTTGACATCGACAAGGAT +
Preference number: 3 (lower is better)
Translates to: HMLFPTIIPKLSISSSVIQVPVI*LDIDKD
Trigger: ATCCTTGTCGATGTCAAGCAAGATAACAGGGACTTG...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
3UTR GCA 72 bp ACAAACCAAAGCATTTACTCGGAAGTTACATTCCCATaGCTGGCAGTCACTTGTGTATGTTTAATACAGTTA +
Preference number: 3 (lower is better)
Translates to: TNQSIYSEVTFP*LAVTCVCLIQL
Trigger: TAACTGTATTAAACATACACAAGTGACTGCCAGGCATGGGAATGTAACTTCCGAGTAAATGCTTTGGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR-3UTR CAA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCACGAATGGACTTTTCTaGTCTTTTGATAGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISTNGLF*SFDRLH
Trigger: ATGGAGCCTATCAAAAGACAAGAAAAGTCCATTCGT...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR TCA 72 bp GACACACAGAGTACGTACTGTGCATTTCCATTTATGTaGAATGTTCAAAACAGGCAAATCCATAGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: DTQSTYCAFPFM*NVQNRQIHRER
Trigger: TCTTTCTCTATGGATTTGCCTGTTTTGAACATTTCACATAAATGGAAATGCACAGTACGTACTCTGTGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR TCA 72 bp AGTGTACTTTTCAAGTTTCAACTAGCAAACTTACCCTaGATAGTATATATAAAACCACCTGCAACTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SVLFKFQLANLP*IVYIKPPATPS
Trigger: GGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCTAGTTGAAACTTGAAAAGTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR GCA 72 bp ATGGCAGTATTAGTAACAGCTATTATTCTGATGGAATaGTTACAATATTGCAGGGACTGTACCAAGTGCTTT +
Preference number: 3 (lower is better)
Translates to: MAVLVTAIILME*LQYCRDCTKCF
Trigger: AAAGCACTTGGTACAGTCCCTGCAATATTGTAAGCATTCCATCAGAATAATAGCTGTTACTAATACTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR-3UTR CAA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 3 (lower is better)
Translates to: LFPTIIPKLSISSSVITSELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR-3UTR CAA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 3 (lower is better)
Translates to: NSQLLLQISELGQVLTKNNPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
3UTR GCA 72 bp GTAACAGCTATTATTCTGATGGAATGCTTACAATATTaGAGGGACTGTACCAAGTGCTTTGTAAATATCTCA +
Preference number: 3 (lower is better)
Translates to: VTAIILMECLQY*RDCTKCFVNIS
Trigger: TGAGATATTTACAAAGCACTTGGTACAGTCCCTGCAATATTGTAAGCATTCCATCAGAATAATAGCTGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR GCA 72 bp ATGGAATGCTTACAATATTGCAGGGACTGTACCAAGTaGTTTGTAAATATCTCACTTAAATCTCACAGTAAT +
Preference number: 3 (lower is better)
Translates to: MECLQYCRDCTK*FVNISLKSHSN
Trigger: ATTACTGTGAGATTTAAGTGAGATATTTACAAAGCACTTGGTACAGTCCCTGCAATATTGTAAGCATTCCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCTGAGGGGCGGCGGCTaGCGAGCGACCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPLRGGG*RATTPS
Trigger: GCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCTGAGGGGCGGCGGCTaGCGAGCGACCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHLRGGG*RATTPS
Trigger: GCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACGCGCTCGGCGACGTCTaGGGGGCTCCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHALGDV*GAPRSS
Trigger: GGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGC...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACCTGAGGGGCGGCGGCTaGCGAGCGACCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDLRGGG*RATTPS
Trigger: GCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAG...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACATGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTCKCGD*GAAADE
Trigger: CTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCA...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGCAGCCAGTTTCGCATTaGCCGCCCCCGCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQQPVSH*PPPPRA
Trigger: GGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTG...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCAGCCAGTTTCGCATTaGCCGCCCCCGCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHQPVSH*PPPPRA
Trigger: GGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGTGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQCKCGD*GAAADE
Trigger: CTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCA...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTGCGCTCGGCGACGTCTaGGGGGCTCCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVALGDV*GAPRSS
Trigger: GGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGC...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCCTGAGGGGCGGCGGCTaGCGAGCGACCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLLRGGG*RATTPS
Trigger: GCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAG...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGCGCTCGGCGACGTCTaGGGGGCTCCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTALGDV*GAPRSS
Trigger: GGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAAGGTGGAGGTTGGGGTaGGCCGAGACCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRRWRLG*AETAPL
Trigger: CAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCT...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGCTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACGGAAATAAGGCCAACTaGTCTGCAGGGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHGNKAN*SAGPAP
Trigger: CGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGCCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 4 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTGCGCTCGGCGACGTCTaGGGGGCTCCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTALGDV*GAPRSS
Trigger: GGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGC...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCAGCCAGTTTCGCATTaGCCGCCCCCGCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTQPVSH*PPPPRA
Trigger: GGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CCA 90 bp CTGTGGAATACAGAAACAAGGCGGTGTGTGGATGAAGAGTTAGTCAACAAATGCCAGCCAGTTTCGCATTaGCCGCCCCCGCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: LWNTETRRCVDEELVNKCQPVSH*PPPPRA
Trigger: GGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTG...GCATTTGTTGACTAACTCTTCATCCACACACCGCCTTGTTTCTGTATTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCCGGGAGGTGGAGGTTaGGGTGAGCCGAGACCGCGC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTPGGGG*GEPRPR
Trigger: GCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
3UTR CAA 72 bp AAAGGAGTCTCTCTCCCCTCAGTGCCTACCCACAGCTaGCACTTAGGTAGGTCTGGGGCTGGTAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KGVSLPSVPTHS*HLGRSGAGSQS
Trigger: AGACTGACTACCAGCCCCAGACCTACCTAAGTGCAAGCTGTGGGTAGGCACTGAGGGGAGAGAGACTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 72 bp AACAGGGTAGGAGAAAGCACTGAGTCAGCCTGTGCCTaGAAGGCAGCTGCTGATCCTTGGGTTTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NRVGESTESACA*KAAADPWVWKA
Trigger: GGCCTTCCAAACCCAAGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACTCAGTGCTTTCTCCTACCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTGAGGGGCGGCGGCTaGCGAGCGACCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLRGGG*RATTPS
Trigger: GCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACCCTGGGCAACAAGAGTaGGACTCCACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDPGQQE*DSTCRA
Trigger: GGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGG...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGCTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAGGAAATAAGGCCAACTaGTCTGCAGGGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRGNKAN*SAGPAP
Trigger: CGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAGTTAGCTGGGTGTGGTaGTGGGCACCAGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTVSWVW*WAPATQ
Trigger: CTGAGTAGCTGGTGCCCATCACCACACCCAGCTAAC...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCGGTGAGGTTTGGGGGTaGCACCTCCTGATTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPGEVWG*HLLIWE
Trigger: TTCCCAAATCAGGAGGTGCCACCCCCAAACCTCACC...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTTGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTCKCGD*GAAADE
Trigger: CTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCA...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAGGTGGAGGTTGGGGTaGGCCGAGACCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTRWRLG*AETAPL
Trigger: CAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAGGGGGTGGCACCTCCTaGTTTGGGAAAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRGGGTS*FGKAPG
Trigger: ACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCC...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACCGGGAGGTGGAGGTTaGGGTGAGCCGAGACCGCGC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRPGGGG*GEPRPR
Trigger: GCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACCCGGGAGGTGGAGGTTaGGGTGAGCCGAGACCGCGC +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYPGGGG*GEPRPR
Trigger: GCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGG...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACCTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTACTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGGAAATAAGGCCAACTaGTCTGCAGGGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTGNKAN*SAGPAP
Trigger: CGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACATGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTACTTGAAGGCAGCTGCTaGTCCTTGGGTTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILLEGSC*SLGLEG
Trigger: GCCTTCCAAACCCAAGGATCAGCAGCTGCCTTCAAG...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTGTGTGGAACAACTGGTaGGGTTTGGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPVWNNW*GLGVAP
Trigger: AGGTGCCACCCCCAAACCTCACCAGTTGTTCCACAC...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACCCGAGACCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDPRPRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGG...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675193.1
CDS-3UTR GCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAGCGCTCGGCGACGTCTaGGGGGCTCCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEALGDV*GAPRSS
Trigger: GGAGCTGCGAGGAGCCCCCCAGACGTCGCCGAGCGC...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGGATACAGCCAGGCGCTaGGCTCATGCTTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQDTARR*AHACNP
Trigger: GGGATTACAAGCATGAGCCCAGCGCCTGGCTGTATC...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATTATTTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTGGCTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: NYFKDNSVCGTTGEVWGWLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...CCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAAATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGTGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TGGGGGTGGCACCTCCTGATTTGGGAAAGCACCAGGTCCCACAGTCCTGTGGCTACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: WGWHLLIWESTRSHSPVATTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...AGCCACAGGACTGTGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp AATTATTTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTGGCCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 4 (lower is better)
Translates to: NYFKDNSVCGTTGEVWGWPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...CCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAAATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCAGCCAGTTTCGCATTaGCCGCCCCCGCCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSQPVSH*PPPPRA
Trigger: GGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTCTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAGATACAGCCAGGCGCTaGGCTCATGCTTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRDTARR*AHACNP
Trigger: GGGATTACAAGCATGAGCCCAGCGCCTGGCTGTATC...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCCCCAAATGAACAGGTaGTACAAGACTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPPQMNR*YKTQAF
Trigger: GAAAGCCTGAGTCTTGTACCACCTGTTCATTTGGGG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR CAA 72 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTaGGCTCCGTTTCCCACAGTTCCCCAAATGAACAGG +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGP*APFPTVPQMNR
Trigger: CCTGTTCATTTGGGGAACTGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAATGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQCKCGD*GAAADE
Trigger: CTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCA...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTCCCACGGAGAATACTaGGGAGAAGACAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLSHGEY*GEDSIP
Trigger: AGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGTCCCACGGAGAATACTaGGGAGAAGACAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQSHGEY*GEDSIP
Trigger: AGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGA...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAGGTAGGAGAAAGCACTaGGTCAGCCTGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRGRRKH*VSLCLE
Trigger: TTCAAGGCACAGGCTGACTCAGTGCTTTCTCCTACC...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACCGAGACCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRPRPRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR GCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACCCGAGACCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYPRPRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGG...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACCCGGGAGGTGGAGGTTaGGGTGAGCCGAGACCGCGC +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNPGGGG*GEPRPR
Trigger: GCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGG...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTCTACTGCTAAACCCTaGGACTCCTCAGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLSTAKP*DSSDLH
Trigger: GTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACTGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAG +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNCKCGD*GAAADE
Trigger: CTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCA...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGGTGGAGGTTGGGGTaGGCCGAGACCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQRWRLG*AETAPL
Trigger: CAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAAGGTGGAGGTTGGGGTaGGCCGAGACCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPERWRLG*AETAPL
Trigger: CAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACACTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTGGAAATAAGGCCAACTaGTCTGCAGGGCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISGNKAN*SAGPAP
Trigger: CGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTTCCCACGGAGAATACTaGGGAGAAGACAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPSHGEY*GEDSIP
Trigger: AGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGA...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCAGCTATCATTGCAATaGTACTGTGGTCTCATCACA +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPQLSLQ*YCGLIT
Trigger: TGTGATGAGACCACAGTATCATTGCAATGATAGCTG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTGTTAGCTGGGTGTGGTaGTGGGCACCAGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTVSWVW*WAPATQ
Trigger: CTGAGTAGCTGGTGCCCATCACCACACCCAGCTAAC...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACACCACAGTTCCCCAAATaGACAGGTGGTACAAGACTC +
Preference number: 4 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTPQFPK*TGGTRL
Trigger: GAGTCTTGTACCACCTGTTCATTTGGGGAACTGTGG...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGGCTACAGTGAGCTGTaGTCATGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTGYSEL*SCHCTP
Trigger: TGGAGTGCAGTGGCATGATCACAGCTCACTGTAGCC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGCACAGGGCTGGTAAATaGAGAGGAGGGATTAAAGAC +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQHRAGK*RGGIKD
Trigger: GTCTTTAATCCCTCCTCTTCATTTACCAGCCCTGTG...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTCCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTACCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAGGAGTGAGCCACCGTaGCCAGCCTCCCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTRSEPP*PASQFQ
Trigger: TTGAAATTGGGAGGCTGGGCACGGTGGCTCACTCCT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTTGTCTGTCTCAGTCTTaGCCCTCAGTGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPCLSQS*PSVGWK
Trigger: TTTCCATCCCACTGAGGGGCAAGACTGAGACAGACA...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGATCTACTGCTAAACCCTaGGACTCCTCAGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRSTAKP*DSSDLH
Trigger: GTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGA...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGCCCCAAATGAACAGGTaGTACAAGACTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQPQMNR*YKTQAF
Trigger: GAAAGCCTGAGTCTTGTACCACCTGTTCATTTGGGG...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGTTACATTCCCATGCCTaGCAGTCACTTGTGTATGTT +
Preference number: 4 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALLHSHA*QSLVYV
Trigger: AACATACACAAGTGACTGCCAGGCATGGGAATGTAA...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTGCAGCTGCTGATCCTTaGGTTTGGAAGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTAAADP*VWKAKP
Trigger: GGGCTTGGCCTTCCAAACCCAAGGATCAGCAGCTGC...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAACCTGGGCAACAAGAGTaGGACTCCACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQPGQQE*DSTCRA
Trigger: GGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGG...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAACCTGGGCAACAAGAGTaGGACTCCACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEPGQQE*DSTCRA
Trigger: GGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGG...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCCTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SDLHSDYRLPALILDSANLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACATGTGGTCTCATCACATaGGCTAGTTTTACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTCGLIT*ASFTGN
Trigger: GTTACCTGTAAAACTAGCTCATGTGATGAGACCACA...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATGTCAGGAGACTTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SDLHSDYRLPALILDSANVRRLA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAAGTCTCCTGAC...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675555.1
CDS-3UTR GCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAACCGAGACCGCGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQPRPRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGG...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR GCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAAAGTCCCTGTTATCTTaGTTGACATCGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTKSLLS*LTSTRI
Trigger: GATCCTTGTCGATGTCAAGCAAGATAACAGGGACTT...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 4 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACACAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATACTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCILDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTTCTACTGCTAAACCCTaGGACTCCTCAGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSASTAKP*DSSDLH
Trigger: GTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGA...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAAGCCTCTGGAGTAGCTaGGATTACAGGCGCCCGACA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRSLWSS*DYRRPT
Trigger: TGTCGGGCGCCTGTAATCCCAGCTACTCCAGAGGCT...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCAAGCCTCTGGAGTAGCTaGGATTACAGGCGCCCGACA +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPSLWSS*DYRRPT
Trigger: TGTCGGGCGCCTGTAATCCCAGCTACTCCAGAGGCT...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSAGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATTATTTCAAGGATAACTCCGTGTGTGGAACAACTGGTGAGGTTTGGGGGTGGGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: NYFKDNSVCGTTGEVWGWGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...CCACCCCCAAACCTCACCAGTTGTTCCACACACGGAGTTATCCTTGAAATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATACTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCILGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGTTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACTTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATCTTCAGCAACAAATTaGAGCTCGTTGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILSSATN*SSLFPQ
Trigger: CTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATGTGGTCTCATCACATaGGCTAGTTTTACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILCGLIT*ASFTGN
Trigger: GTTACCTGTAAAACTAGCTCATGTGATGAGACCACA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACAAGGTCAAGGCTACAGTaGGCTGTGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTRSRLQ*AVIMPL
Trigger: CAGTGGCATGATCACAGCTCACTGTAGCCTTGACCT...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTCCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSAPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTGGGACTCCTCAGACTTaGACTCAGATTATCGTTTGC +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVGTPQT*TQIIVC
Trigger: GCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCC...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGCAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 4 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACCTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNLDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACAGCCACAGACTGTCCTaGTATCTTTTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDSHRLS*YLLGPM
Trigger: CATAGGACCTAAAAGATACCAGGACAGTCTGTGGCT...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
CDS-3UTR CCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAACTGCTTATCGTGTCTaGGGTTCACCGGAAATAAAT +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILTAYRV*GSPEIN
Trigger: ATTTATTTCCGGTGAACCCCAGACACGATAAGCAGT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTTACATTCCCATGCCTaGCAGTCACTTGTGTATGTT +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLLHSHA*QSLVYV
Trigger: AACATACACAAGTGACTGCCAGGCATGGGAATGTAA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp GGTATGAAACTCACTGTCAAAGGGCACTTAGGTCCGTTGGCTCCGTTTCCCACAACCACAACCCGTCTTTaGAAAGAAGTTCATAGTGTA +
Preference number: 4 (lower is better)
Translates to: GMKLTVKGHLGPLAPFPTTTTRL*KEVHSV
Trigger: TACACTATGAACTTCTTTCCAAAGACGGGTTGTGGT...TGTGGGAAACGGAGCCAACGGACCTAAGTGCCCTTTGACAGTGAGTTTCATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSAFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAACTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPELRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAACTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQLRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACATCTTCAGCAACAAATTaGAGCTCGTTGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTSSATN*SSLFPQ
Trigger: CTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGA...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTTCTTCAGCAACAAATTaGAGCTCGTTGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPSSATN*SSLFPQ
Trigger: CTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGA...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTACCAAGGTTCAGAACTaGGAATCATATTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPTKVQN*ESYWFL
Trigger: GAGGAACCAATATGATTCTCAGTTCTGAACCTTGGT...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACATAGCCAATCAAGCTTaGAAAAGAACAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHIANQA*KRTRLE
Trigger: CTCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTAT...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp CTGTGGAATACAGAAACAAGGCGGTGTGTGGATGAAGAGTTAGTCAACAAATGCAGACTAATGGGAGACTaGCACAGAGCTAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LWNTETRRCVDEELVNKCRLMGD*HRARIS
Trigger: AGAGATCCTAGCTCTGTGTCAGTCTCCCATTAGTCT...GCATTTGTTGACTAACTCTTCATCCACACACCGCCTTGTTTCTGTATTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCCTCCCCGAGTTGCTTaGCAGCCACTTGACGATGTC +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSPPRVA*QPLDDV
Trigger: GACATCGTCAAGTGGCTGGCAAGCAACTCGGGGAGG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTGAAGTTACATTCCCATaGCTGGCAGTCACTTGTGTA +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVEVTFP*LAVTCV
Trigger: TACACAAGTGACTGCCAGGCATGGGAATGTAACTTC...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAAAGGAGTGAGCCACCGTaGCCAGCCTCCCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQRSEPP*PASQFQ
Trigger: TTGAAATTGGGAGGCTGGGCACGGTGGCTCACTCCT...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAACTTGACACAAGGCCGTaGAGGTCTTGGCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPELDTRP*RSWLSH
Trigger: GTGGGAGAGCCAAGACCTCCACGGCCTTGTGTCAAG...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTAGCCACAGACTGTCCTaGTATCTTTTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVSHRLS*YLLGPM
Trigger: CATAGGACCTAAAAGATACCAGGACAGTCTGTGGCT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
CDS-3UTR CCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTTCTACTGCTAAACCCTaGGACTCCTCAGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTSTAKP*DSSDLH
Trigger: GTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGA...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TTAACCACTAGACTATTTCCTAGCTACGTGAATTGGTTTCTATTTCCAGCAATGTGCCCCTCAGTGGGATaGAAAGGAGTCTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTTRLFPSYVNWFLFPAMCPSVG*KGVSLP
Trigger: GGGGAGAGAGACTCCTTTCCATCCCACTGAGGGGCA...CATTGCTGGAAATAGAAACCAATTCACGTAGCTAGGAAATAGTCTAGTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 72 bp ATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTGCCTGCCCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: IQSTAKPWDSSD*HSDYRLPALIL
Trigger: TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATACTCAGGCAGCCCCGATaGAGTGTCTTCGGACAGACT +
Preference number: 4 (lower is better)
Translates to: HMLFPTIIPKLSISSSVILRQPR*SVFGQT
Trigger: AGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAG...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCTCGGAAACTCACGCTaGCAACTCGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSLGNSR*QLDPQA
Trigger: TGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTTCTTCAGCAACAAATTaGAGCTCGTTGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSASSATN*SSLFPQ
Trigger: CTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGA...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSASLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQTTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLTTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAAATCGAGCTGGAAAATaGCCTAAAGTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILNRAGK*PKVITV
Trigger: AACTGTAATGACTTTAGGTCATTTTCCAGCTCGATT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGAATCGAGCTGGAAAATaGCCTAAAGTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQNRAGK*PKVITV
Trigger: AACTGTAATGACTTTAGGTCATTTTCCAGCTCGATT...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTCAGCTATCATTGCAATaGTACTGTGGTCTCATCACA +
Preference number: 4 (lower is better)
Translates to: SSDLHSDYRLPALILDSAQLSLQ*YCGLIT
Trigger: TGTGATGAGACCACAGTATCATTGCAATGATAGCTG...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACCCACAGTTCCCCAAATaGACAGGTGGTACAAGACTC +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYPQFPK*TGGTRL
Trigger: GAGTCTTGTACCACCTGTTCATTTGGGGAACTGTGG...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACGACAGCAAAAACATGTaGCAAAATTGGACTTCATCA +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHDSKNM*QNWTSS
Trigger: TGATGAAGTCCAATTTTGTCACATGTTTTTGCTGTC...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCACAGACTGTCCTGTTaGGAAACAACCAAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: SDLHSDYRLPALILDSANHRLSC*ETTKAD
Trigger: ATCGGCTTTGGTTGTTTCTCAACAGGACAGTCTGTG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGGCCTCCTCTTGTTCTaGCTGATAAAGTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTGLLLF*LIKFDS
Trigger: ACTGTCAAACTTTATCAGGCAGAACAAGAGGAGGCC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGTGTAAAGTGGGCTGCTaGTTTAGAAAACAACCTGGC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTCKVGC*FRKQPG
Trigger: GCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACA...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: SDLHSDYRLPALILDSANPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 4 (lower is better)
Translates to: PWDSSDLHSDYRLPALILTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCATTCAAGCGATTCTTCTaGCTCAGCCTCTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPFKRFF*LSLWSS
Trigger: GCTACTCCAGAGGCTGAGGCAGAAGAATCGCTTGAA...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGATTCAAGCGATTCTTCTaGCTCAGCCTCTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRFKRFF*LSLWSS
Trigger: GCTACTCCAGAGGCTGAGGCAGAAGAATCGCTTGAA...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCTCACCCAGGATGAAATaGAGTGGCAATCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTSPRMK*SGNLSS
Trigger: TGAGCTGAGATTGCCACTGCATTTCATCCTGGGTGA...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACTATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHYGNVK*AAALEN
Trigger: GTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATA...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACAGCCACAGACTGTCCTaGTATCTTTTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDSHRLS*YLLGPM
Trigger: CATAGGACCTAAAAGATACCAGGACAGTCTGTGGCT...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGAACCTTTATAAAGCATaGCTCAACTCCGTGATCAAA +
Preference number: 4 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLNLYKA*LNSVIK
Trigger: TTTGATCACGGAGTTGAGCCATGCTTTATAAAGGTT...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 72 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LIGSMTIQKVKG*LSRLLKVPVSD
Trigger: GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGGCACTTCACAGCCATaGGCACCTATTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRGTSQP*APIMNF
Trigger: GAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCC...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR TCA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTTTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACTTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACTTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp GGGCTGGTAAATGAAGAGGAGGGATTAAAGACTCCCAAGCTCAAGTTCTTAACCGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: GLVNEEEGLKTPKLKFLTEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...GGTTAAGAACTTGAGCTTGGGAGTCTTTAATCCCTCCTCTTCATTTACCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACGTGACTTGGGTAAAATaGAAGATACAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYVTWVK*KIQPGA
Trigger: AGCGCCTGGCTGTATCTTTCATTTTACCCAAGTCAC...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAAGTCAGCCTGTGCCTTaGAGGCAGCTGCTGATCCTT +
Preference number: 4 (lower is better)
Translates to: HMLFPTIIPKLSISSSVISQPVP*RQLLIL
Trigger: AAGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTTCCCTCTTAACAATTaGGGAACAAACGAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDFPLNN*GTNEEL
Trigger: TAACTCTTCGTTTGTTCCTCAATTGTTAAGAGGGAA...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCTGTAAAGTGGGCTGCTaGTTTAGAAAACAACCTGGC +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTCKVGC*FRKQPG
Trigger: GCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACA...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACAGATACAGCTATCATTaGAATGATACTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDRYSYH*NDTVVS
Trigger: TGAGACCACAGTATCATTGCAATGATAGCTGTATCT...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTAGCCACAGACTGTCCTaGTATCTTTTAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTSHRLS*YLLGPM
Trigger: CATAGGACCTAAAAGATACCAGGACAGTCTGTGGCT...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
CDS-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCAGGGTGCTGGGACAACTaGATATCCACATGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPGCWDN*ISTCKR
Trigger: TCTTTTGCATGTGGATATCCAGTTGTCCCAGCACCC...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCTCAACAAATGGGTGCTaGGACAACTGGATATCCACA +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTSTNGC*DNWIST
Trigger: TGTGGATATCCAGTTGTCCCAGCACCCATTTGTTGA...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCTGATTTTCAACAAATaGGTGCTGGGACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTLIFNK*VLGQLD
Trigger: ATCCAGTTGTCCCAGCACCCATTTGTTGAAAATCAG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAAGTCTTGCCCCTCAGTaGGATGGAAAGGAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPESLAPQ*DGKESL
Trigger: GAGAGACTCCTTTCCATCCCACTGAGGGGCAAGACT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAATTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAAACACACAATTATATaGCCCAGGTCTTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTKHTII*PRSSTP
Trigger: AGGAGTAGAAGACCTGGGTCATATAATTGTGTGTTT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACTGCTTGCCAGCCACTTaGCGATGTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNCLPAT*RCPWRS
Trigger: TGATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCA...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACGTGACTTGGGTAAAATaGAAGATACAGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNVTWVK*KIQPGA
Trigger: AGCGCCTGGCTGTATCTTTCATTTTACCCAAGTCAC...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGATGTAAAGTGGGCTGCTaGTTTAGAAAACAACCTGGC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRCKVGC*FRKQPG
Trigger: GCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACA...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGAATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: LGLLRLALRLSFACPDFRICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTAGAGTATGTGTAGCATaGTTTATCGGATCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVRVCVA*FIGSVL
Trigger: TAAGACAGATCCGATAAAGCATGCTACACATACTCT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR GCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATCACCCAGGATGAAATaGAGTGGCAATCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQSPRMK*SGNLSS
Trigger: TGAGCTGAGATTGCCACTGCATTTCATCCTGGGTGA...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp GGGCTGGTAAATGAAGAGGAGGGATTAAAGACTCCCAAGCTCAAGTTCTTAACCAGGGACTGTACCAAGTaGTTTGTAAATATCTCACTT +
Preference number: 4 (lower is better)
Translates to: GLVNEEEGLKTPKLKFLTRDCTK*FVNISL
Trigger: AAGTGAGATATTTACAAAGCACTTGGTACAGTCCCT...GGTTAAGAACTTGAGCTTGGGAGTCTTTAATCCCTCCTCTTCATTTACCAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATACTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: HMLFPTIIPKLSISSSVILHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACCTGCACACCACAGCTTaGAGGACTGAAGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNLHTTA*RTEASN
Trigger: ATTGCTCGCTTCAGTCCTCCAAGCTGTGGTGTGCAG...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCTGATACATACAAAATaGACAGACCTGGAACACATG +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTLIHTK*TDLEHM
Trigger: CATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTAAATGGAGACCATaGGTCTGTTTGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: WDSSDLHSDYRLPALILDSKWRP*VCLFDF
Trigger: AAAATCAAACAAACAGACCCATGGTCTCCATTTAGA...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGATCAACAAATGGGTGCTaGGACAACTGGATATCCACA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRSTNGC*DNWIST
Trigger: TGTGGATATCCAGTTGTCCCAGCACCCATTTGTTGA...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp CTGTGGAATACAGAAACAAGGCGGTGTGTGGATGAAGAGTTAGTCAACAAATGCCCTAGCTACGTGAATTaGTTTCTATTTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LWNTETRRCVDEELVNKCPSYVN*FLFPAM
Trigger: CATTGCTGGAAATAGAAACCAATTCACGTAGCTAGG...GCATTTGTTGACTAACTCTTCATCCACACACCGCCTTGTTTCTGTATTCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp TTAACCACTAGACTATTTCCTAGCTACGTGAATTGGTTTCTATTTCCAGCAATGGGTCCCACAGTCCTGTaGCTGTGGAATACAGAAACA +
Preference number: 4 (lower is better)
Translates to: LTTRLFPSYVNWFLFPAMGPTVL*LWNTET
Trigger: TGTTTCTGTATTCCACAGCCACAGGACTGTGGGACC...CATTGCTGGAAATAGAAACCAATTCACGTAGCTAGGAAATAGTCTAGTGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
3UTR CAA 72 bp ATGGAAGTGCAAGAGACCCAGAATAGCCAATCAAGCTaGAAAAAGAACAAGGTTGGAGGATTCACATTTCCT +
Preference number: 4 (lower is better)
Translates to: MEVQETQNSQSS*KKNKVGGFTFP
Trigger: AGGAAATGTGAATCCTCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTATTCTGGGTCTCTTGCACTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATATTTGTGGAGATTTCTTaGCACAAGGCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HMLFPTIIPKLSISSSVIFVEIS*HKAVEV
Trigger: GACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAA...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGTGGCAGTGCCTCAAGTaGTTAAACACACAATTATAT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTWQCLK*LNTQLY
Trigger: ATATAATTGTGTGTTTAATCACTTGAGGCACTGCCA...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACTCTTCAGCAACAAATTaGAGCTCGTTGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYSSATN*SSLFPQ
Trigger: CTGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGA...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACTCCCACGGAGAATACTaGGGAGAAGACAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNSHGEY*GEDSIP
Trigger: AGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGA...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACAATCGAGCTGGAAAATaGCCTAAAGTCATTACAGTT +
Preference number: 4 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDNRAGK*PKVITV
Trigger: AACTGTAATGACTTTAGGTCATTTTCCAGCTCGATT...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACCTGATTCAAAACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPPDSKR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTTTTGAATCAGG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACCTGATTCAAAACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRPDSKR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTTTTGAATCAGG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCTGGCCAATAAGCACATaGAGAAAATGCTCAACATCA +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTWPIST*RKCSTS
Trigger: TGATGTTGAGCATTTTCTTCATGTGCTTATTGGCCA...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACACTAAAGATATACAAATaGCTCTCTCTCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTLKIYK*LSLPSF
Trigger: AAAGGAGGGGAGAGAGAGTCATTTGTATATCTTTAG...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCTACATCTACAGTCACTaGTTTTCAACAAATGGGTGC +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTYIYSH*FSTNGC
Trigger: GCACCCATTTGTTGAAAATCAGTGACTGTAGATGTA...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAAATGTAAAGTGGGCTaGTGCTTTAGAAAACAACCT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTKCKVG*CFRKQP
Trigger: AGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCCATCCAGATGCCCATaGTTACATCTTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSPSRCP*LHLHPD
Trigger: ATCAGGGTGAAGATGTAAGCATGGGCATCTGGATGG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAAGTCCCTGTTATCTTaGTTGACATCGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIKSLLS*LTSTRI
Trigger: GATCCTTGTCGATGTCAAGCAAGATAACAGGGACTT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACCAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTATTATTCTGATGGAATaGTTACAATATTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVIILME*LQYCRD
Trigger: GTCCCTGCAATATTGTAAGCATTCCATCAGAATAAT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCAACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCITFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTGATTTTCAACAAATaGGTGCTGGGACAACTGGAT +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLIFNK*VLGQLD
Trigger: ATCCAGTTGTCCCAGCACCCATTTGTTGAAAATCAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNSLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTAAAGATATACAAATaGCTCTCTCTCCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLKIYK*LSLPSF
Trigger: AAAGGAGGGGAGAGAGAGTCATTTGTATATCTTTAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AGCAAACTTACCCTGAATAGTATATATAAAACCACCTGCAACTCCCTCCACACCGACAGCAAAAACATGTaGCAAAATTGGACTTCATCA +
Preference number: 4 (lower is better)
Translates to: SKLTLNSIYKTTCNSLHTDSKNM*QNWTSS
Trigger: TGATGAAGTCCAATTTTGTCACATGTTTTTGCTGTC...GGTGTGGAGGGAGTTGCAGGTGGTTTTATATATACTATTCAGGGTAAGTTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTTATTTCCTAGCTACGTaGATTGGTTTCTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTYFLAT*IGFYFQ
Trigger: CTGGAAATAGAAACCAATTCACGTAGCTAGGAAATA...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR TCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCAAGGCGGTGTGTGGATaGAGAGTTAGTCAACAAATG +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSKAVCG*RVSQQM
Trigger: CATTTGTTGACTAACTCTTCATCCACACACCGCCTT...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR GCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAATGTAAAGTGGGCTGCTaGTTTAGAAAACAACCTGGC +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQCKVGC*FRKQPG
Trigger: GCCAGGTTGTTTTCTAAAGCAGCAGCCCACTTTACA...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTAAGTCCCTGTTATCTTaGTTGACATCGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISKSLLS*LTSTRI
Trigger: GATCCTTGTCGATGTCAAGCAAGATAACAGGGACTT...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACAAGTCCCTGTTATCTTaGTTGACATCGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNKSLLS*LTSTRI
Trigger: GATCCTTGTCGATGTCAAGCAAGATAACAGGGACTT...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR GCA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR GCA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCGAAGTTACATTCCCATaGCTGGCAGTCACTTGTGTA +
Preference number: 4 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISEVTFP*LAVTCV
Trigger: TACACAAGTGACTGCCAGGCATGGGAATGTAACTTC...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACACGTTTCGAAGTTCATaGTTATTGCGAGCTGACAAC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNTFRSS*LLRADN
Trigger: GTTGTCAGCTCGCAATAACCATGAACTTCGAAACGT...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACAAAATGGACAGACCTaGAACACATGTTACAGCAAA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRQNGQT*NTCYSK
Trigger: TTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCACTGATACATACAAAATaGACAGACCTGGAACACATG +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPLIHTK*TDLEHM
Trigger: CATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAG...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAGACACATAGATCAATaGAATAGAATTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTRHIDQ*NRIESP
Trigger: AGGACTCTCAATTCTATTCCATTGATCTATGTGTCT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACTTCACAAGCACACGTTaGCTTAATGTGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNFTSTR*LNVGCC
Trigger: ACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAA...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAAAAACACACAATTATATaGCCCAGGTCTTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQKHTII*PRSSTP
Trigger: AGGAGTAGAAGACCTGGGTCATATAATTGTGTGTTT...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGATGGCAGTGCCTCAAGTaGTTAAACACACAATTATAT +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRWQCLK*LNTQLY
Trigger: ATATAATTGTGTGTTTAATCACTTGAGGCACTGCCA...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAAGTCTGGAACTCTCTTaGAAGACCATACAGTCTACT +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPESLELS*KTIQST
Trigger: AGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGACT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAATGTGGTCTCATCACATaGGCTAGTTTTACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPECGLIT*ASFTGN
Trigger: GTTACCTGTAAAACTAGCTCATGTGATGAGACCACA...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATGGCCAATAAGCACATaGAGAAAATGCTCAACATCA +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQWPIST*RKCSTS
Trigger: TGATGTTGAGCATTTTCTTCATGTGCTTATTGGCCA...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACTACATCTACAGTCACTaGTTTTCAACAAATGGGTGC +
Preference number: 4 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDYIYSH*FSTNGC
Trigger: GCACCCATTTGTTGAAAATCAGTGACTGTAGATGTA...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp CTGTTAACAGTGTGCAGCCTCAGCAATATGACAAAACCCTGTCTCTACAAAACAACAGAGTACGTACTGTaGATTTCCATTTATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLTVCSLSNMTKPCLYKTTEYVL*ISIYVK
Trigger: TTTCACATAAATGGAAATGCACAGTACGTACTCTGT...TGTTTTGTAGAGACAGGGTTTTGTCATATTGCTGAGGCTGCACACTGTTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp TGTGTTAAAGGGCACCATTTGCAAAGCATGTATCTGATAAGGGACTTGTATCCAAAATGTAAAGTGGGCTaGTGCTTTAGAAAACAACCT +
Preference number: 4 (lower is better)
Translates to: CVKGHHLQSMYLIRDLYPKCKVG*CFRKQP
Trigger: AGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTT...TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCAAGTTAGTTCAAGTTaGCCACTTCAGAGATCCACA +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSQVSSS*PLQRST
Trigger: TGTGGATCTCTGAAGTGGGCAACTTGAACTAACTTG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCITLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: SDLHSDYRLPALILDSANICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAGAGTATGTGTAGCATaGTTTATCGGATCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIRVCVA*FIGSVL
Trigger: TAAGACAGATCCGATAAAGCATGCTACACATACTCT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR GCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACAGAGTATGTGTAGCATaGTTTATCGGATCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYRVCVA*FIGSVL
Trigger: TAAGACAGATCCGATAAAGCATGCTACACATACTCT...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR GCA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACAGATACAGCTATCATTaGAATGATACTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYRYSYH*NDTVVS
Trigger: TGAGACCACAGTATCATTGCAATGATAGCTGTATCT...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAACAAAATGGACAGACCTaGAACACATGTTACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQQNGQT*NTCYSK
Trigger: TTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTG...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACCTGATACATACAAAATaGACAGACCTGGAACACATG +
Preference number: 4 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDLIHTK*TDLEHM
Trigger: CATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAG...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGATATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRYGNVK*AAALEN
Trigger: GTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATA...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
3UTR CAA 72 bp GATTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTATGTATAACAATATGC +
Preference number: 4 (lower is better)
Translates to: DLVGHFGKCPLN*GRHPLLCITIC
Trigger: GCATATTGTTATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATGGCAGTGCCTCAAGTaGTTAAACACACAATTATAT +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQWQCLK*LNTQLY
Trigger: ATATAATTGTGTGTTTAATCACTTGAGGCACTGCCA...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR TCA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISTTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACACTACTACAGATTTCTaGACTAGGCCAAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNTTTDF*TRPSFN
Trigger: GTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGT...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAATAGCCAATCAAGCTTaGAAAAGAACAAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQIANQA*KRTRLE
Trigger: CTCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTAT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAACAGAGTACGTACTGTaGATTTCCATTTATGTGAAA +
Preference number: 4 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRTEYVL*ISIYVK
Trigger: TTTCACATAAATGGAAATGCACAGTACGTACTCTGT...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAAAAATGTAAAGTGGGCTaGTGCTTTAGAAAACAACCT +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQKCKVG*CFRKQP
Trigger: AGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTT...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACAGATTATCGTTTGCCTaGCCTGATTTTAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNRLSFA*PDFRLC
Trigger: GCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCT...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 4 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNTLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAACAAAATGGACAGACCTaGAACACATGTTACAGCAAA +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQQNGQT*NTCYSK
Trigger: TTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTG...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQYGNVK*AAALEN
Trigger: GTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATA...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACTGCTTATCGTGTCTaGGGTTCACCGGAAATAAAT +
Preference number: 4 (lower is better)
Translates to: HMLFPTIIPKLSISSSVITAYRV*GSPEIN
Trigger: ATTTATTTCCGGTGAACCCCAGACACGATAAGCAGT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATATCTAAATGGAGACCATaGGTCTGTTTGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCISKWRP*VCLFDF
Trigger: AAAATCAAACAAACAGACCCATGGTCTCCATTTAGA...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR TCA 90 bp AATCAAAATATCCACTATTTACCACAACCCGTCTTTGGAAAGAAGTTCATAGTGTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: NQNIHYLPQPVFGKKFIVSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...CACTATGAACTTCTTTCCAAAGACGGGTTGTGGTAAATAGTGGATATTTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR TCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACTCCTGCAATCCAGGTTaGAATTCAAACTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNSCNPG*NSNSQL
Trigger: TAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGA...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR TCA 90 bp AATCAAAATATCCACTATTTACCACAACCCGTCTTTGGAAAGAAGTTCATAGTGGAGATCCACAAAATCTaGCATTATTTCCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: NQNIHYLPQPVFGKKFIVEIHKI*HYFQKP
Trigger: GGGTTTCTGGAAATAATGTCAGATTTTGTGGATCTC...CACTATGAACTTCTTTCCAAAGACGGGTTGTGGTAAATAGTGGATATTTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR GCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACACAGAGTACGTACTGTaGATTTCCATTTATGTGAAA +
Preference number: 4 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDTEYVL*ISIYVK
Trigger: TTTCACATAAATGGAAATGCACAGTACGTACTCTGT...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAAAATGTAAAGTGGGCTaGTGCTTTAGAAAACAACCT +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQKCKVG*CFRKQP
Trigger: AGGTTGTTTTCTAAAGCAGCAGCCCACTTTACATTT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR GCA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACCCTGAGAGGTATTTaGTTTTATTCATACTCACAC +
Preference number: 4 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPETLRGI*FYSYSH
Trigger: GTGTGAGTATGAATAAAAGCAAATACCTCTCAGGGT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAATATGGAAATGTAAAGTaGGCTGCTGCTTTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQYGNVK*AAALEN
Trigger: GTTTTCTAAAGCAGCAGCCCACTTTACATTTCCATA...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACACCACAACCCGTCTTTaGAAAGAAGTTCATAGTGTA +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNTTTRL*KEVHSV
Trigger: TACACTATGAACTTCTTTCCAAAGACGGGTTGTGGT...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CCA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACATCATAAAATTCATATaGAAGTGCAAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDIIKFI*KCKRPR
Trigger: TCTGGGTCTCTTGCACTTCCATATGAATTTTATGAT...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CCA 90 bp TCTAGTTCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAAATCATAAAATTCATATaGAAGTGCAAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: SSSYTIIIHPVNSVQPQQIIKFI*KCKRPR
Trigger: TCTGGGTCTCTTGCACTTCCATATGAATTTTATGAT...TTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGAACTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR GCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCATCTGTCTTCTCAGTTaGACTATTTCTAAGAGTACT +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSICLLS*TISKST
Trigger: AGTACTCTTAGAAATAGTGCAACTGAGAAGACAGAT...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR GCA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACGAGTTAGTCAACAAATaGCATTCCGTAATGAACGAT +
Preference number: 4 (lower is better)
Translates to: NSQLLLQISELGQVLTKNELVNK*HSVMND
Trigger: ATCGTTCATTACGGAATGGCATTTGTTGACTAACTC...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCTCTAAATGGAGACCATaGGTCTGTTTGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSSKWRP*VCLFDF
Trigger: AAAATCAAACAAACAGACCCATGGTCTCCATTTAGA...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CCA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCTGTAGATCATTTAGTTaGCACCCTAATTTTACAGAG +
Preference number: 4 (lower is better)
Translates to: LFPTIIPKLSISSSVITSCRSFS*HPNFTE
Trigger: CTCTGTAAAATTAGGGTGCCAACTAAATGATCTACA...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
3UTR CAA 72 bp CAAAATTTACAACTTTTGTGTGTTAAAGGGCACCATTaGCAAAGCATGTATCTGATAAGGGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: QNLQLLCVKGHH*QSMYLIRDLYP
Trigger: TGGATACAAGTCCCTTATCAGATACATGCTTTGCAAATGGTGCCCTTTAACACACAAAAGTTGTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
3UTR CAA 72 bp AGTAACAGCTATTATTCTGATGGAATGCTTACAATATaGCAGGGACTGTACCAAGTGCTTTGTAAATATCTC +
Preference number: 4 (lower is better)
Translates to: SNSYYSDGMLTI*QGLYQVLCKYL
Trigger: GAGATATTTACAAAGCACTTGGTACAGTCCCTGCAATATTGTAAGCATTCCATCAGAATAATAGCTGTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CCA 90 bp AATCAAAATATCCACTATTTACCACAACCCGTCTTTGGAAAGAAGTTCATAGTGTGTAGATCATTTAGTTaGCACCCTAATTTTACAGAG +
Preference number: 4 (lower is better)
Translates to: NQNIHYLPQPVFGKKFIVCRSFS*HPNFTE
Trigger: CTCTGTAAAATTAGGGTGCCAACTAAATGATCTACA...CACTATGAACTTCTTTCCAAAGACGGGTTGTGGTAAATAGTGGATATTTTGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS TCA 90 bp TCCCGCGTCCCGGCGGAGAGGGAGGGGACCTGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAGCGACCACTCCGAGCACGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: SRVPAEREGTCKCGD*GAAADERPLRARPP
Trigger: GGGCGGGCGTGCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGGGACGCGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313984.3
ENST00000366600.8
ENST00000494378.1
ENST00000635244.1
ENST00000635360.1
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCCCAGCCAGTTTCGCATaGGCCGCCCCCGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPPASFA*AAPAAS
Trigger: GCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGG...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCAGCCAGTTTCGCATaGGCCGCCCCCGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLPASFA*AAPAAS
Trigger: GCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGG...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCGCCGAGACCGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPAETAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGC...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTCCAGCCAGTTTCGCATaGGCCGCCCCCGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVPASFA*AAPAAS
Trigger: GCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGG...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGGCCGAGACCGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQAETAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGC...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675193.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACCAGCCAGTTTCGCATaGGCCGCCCCCGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRPASFA*AAPAAS
Trigger: GCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CAA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGCCGAGACCGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTAETAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGTTTAACCTCCCCGAGTaGCTTGCCAGCCACTTGACG +
Preference number: 5 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALFNLPE*LASHLT
Trigger: CGTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAA...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGAGGCAGGAGAATTGTTaGAACCCGGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALRQENC*NPGSGG
Trigger: ACCTCCGCTTCCCGGGTTCAAACAATTCTCCTGCCT...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS CCA 90 bp TGCCTGCCCCTGAAAGCACACGCCCACTCCTATGAAGGACTGCATTaGTACTACAGTCTTTTCCTGCCATCCTGTACCTCTGGTAAGATG +
Preference number: 5 (lower is better)
Translates to: CLPLKAHAHSYEGLH*YYSLFLPSCTSGKM
Trigger: CATCTTACCAGAGGTACAGGATGGCAGGAAAAGACTGTAGTACCAATGCAGTCCTTCATAGGAGTGGGCGTGTGCTTTCAGGGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS-3UTR CAA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCCCAGCCAGTTTCGCATaGGCCGCCCCCGCCGCGAGC +
Preference number: 5 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISPASFA*AAPAAS
Trigger: GCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGG...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGTTTAACCTCCCCGAGTaGCTTGCCAGCCACTTGACG +
Preference number: 5 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQFNLPE*LASHLT
Trigger: CGTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAA...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTTTAACCTCCCCGAGTaGCTTGCCAGCCACTTGACG +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLFNLPE*LASHLT
Trigger: CGTCAAGTGGCTGGCAAGCAACTCGGGGAGGTTAAA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS TCA 90 bp TCTGGAGTGCTGCCCTGGTACAAGAAAATATCAAGTGCCTGCCCCTaGAAGCACACGCCCACTCCTATGAAGGACTGCATTGGTACTACA +
Preference number: 5 (lower is better)
Translates to: SGVLPWYKKISSACP*KHTPTPMKDCIGTT
Trigger: TGTAGTACCAATGCAGTCCTTCATAGGAGTGGGCGTGTGCTTTCAGGGGCAGGCACTTGATATTTTCTTGTACCAGGGCAGCACTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS GCA 90 bp CATCTATCACTCTGGAGTGCTGCCCTGGTACAAGAAAATATCAAGTaGCTGCCCCTGAAAGCACACGCCCACTCCTATGAAGGACTGCAT +
Preference number: 5 (lower is better)
Translates to: HLSLWSAALVQENIK*LPLKAHAHSYEGLH
Trigger: ATGCAGTCCTTCATAGGAGTGGGCGTGTGCTTTCAGGGGCAGGCACTTGATATTTTCTTGTACCAGGGCAGCACTCCAGAGTGATAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTATTGCTTGCCAGCCACTaGACGATGTCCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: PWDSSDLHSDYRLPALILLLASH*TMSLEI
Trigger: GATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAA...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTTGCTTGCCAGCCACTaGACGATGTCCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLLLASH*TMSLEI
Trigger: GATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 5 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: LLNPGTPQTCTQIIVCLPLRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...GGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGTTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALLRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTGGGCACTTAGGTCCGTaGGCTCCGTTTCCCACAGTT +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAGHLGP*APFPTV
Trigger: AACTGTGGGAAACGGAGCCAACGGACCTAAGTGCCC...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAGCCGAGACCGCGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQAETAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGC...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313984.3
ENST00000635244.1
CDS-3UTR CAA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: PWDSSDLHSDYRLPALILNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp GTGTGGGGTTTCCTTTTGGGAGGTGGAGCCGGTTGTAGAACTCTAAGAATACACCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VWGFLLGGGAGCRTLRIHLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...GTGTATTCTTAGAGTTCTACAACCGGCTCCACCTCCCAAAAGGAAACCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTAGGCAGGAGAATTGTTaGAACCCGGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVRQENC*NPGSGG
Trigger: ACCTCCGCTTCCCGGGTTCAAACAATTCTCCTGCCT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS GCA 90 bp TTAGCCCATCCACAGTTGGTACCTTCATCTATCACTCTGGAGTGCTaGCCTGGTACAAGAAAATATCAAGTGCCTGCCCCTGAAAGCACA +
Preference number: 5 (lower is better)
Translates to: LAHPQLVPSSITLEC*PGTRKYQVPAPEST
Trigger: TGTGCTTTCAGGGGCAGGCACTTGATATTTTCTTGTACCAGGGCAGCACTCCAGAGTGATAGATGAAGGTACCAACTGTGGATGGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LGLLRLALRLSFACPDFRLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GGGCTGGTAAATGAAGAGGAGGGATTAAAGACTCCCAAGCTCAAGTTCTTAACCTTGTCTGTCTCAGTCTaGCCCCTCAGTGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: GLVNEEEGLKTPKLKFLTLSVSV*PLSGME
Trigger: TTCCATCCCACTGAGGGGCAAGACTGAGACAGACAA...GGTTAAGAACTTGAGCTTGGGAGTCTTTAATCCCTCCTCTTCATTTACCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CAA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATGAGTCAGCCTGTGCCTaGAAGGCAGCTGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: SDLHSDYRLPALILDSANESACA*KAAADP
Trigger: AGGATCAGCAGCTGCCTTCAAGGCACAGGCTGACTC...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTGTGGCACCTCCTGATTaGGGAAAGCACCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTVAPPD*GKHQVP
Trigger: TGGGACCTGGTGCTTTCCCAAATCAGGAGGTGCCAC...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CAA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 5 (lower is better)
Translates to: WDSSDLHSDYRLPALILDWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTTAAGAAACACCGCATaGGTTCTGGGTGAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: WDSSDLHSDYRLPALILDLRNTA*VLGESA
Trigger: GGCACTTTCACCCAGAACCAATGCGGTGTTTCTTAA...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: AKPWDSSDLHSDYRLPALILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...CAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTACAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: PWDSSDLHSDYRLPALILQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACCGTAAAGTACTGTTCTaGGTAACTTCCCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: WDSSDLHSDYRLPALILDRKVLF*VTSHSA
Trigger: GGCAGAGTGGGAAGTTACCAAGAACAGTACTTTACG...GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675193.1
CDS-3UTR CAA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGGTCTTCAGCAACAAATaGAAGCTCGTTGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLVFSNK*KLVVST
Trigger: TGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGAC...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGTCTTCAGCAACAAATaGAAGCTCGTTGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: PWDSSDLHSDYRLPALILVFSNK*KLVVST
Trigger: TGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGAC...TAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAAGTCCCTGTTATCTaGCTTGACATCGACAAGGAT +
Preference number: 5 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPQVPVI*LDIDKD
Trigger: ATCCTTGTCGATGTCAAGCAAGATAACAGGGACTTG...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: LGLLRLALRLSFACPDFRHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...TCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAAAGGCCGTGGAGGTCTaGGCTCTCCCACACGATTGT +
Preference number: 5 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEKAVEV*ALPHDC
Trigger: ACAATCGTGTGGGAGAGCCAAGACCTCCACGGCCTT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SDLHSDYRLPALILDSANLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGATGATCAATAAGTCTTaGAGGGCGAGAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLMINKS*RARMKV
Trigger: AACCTTCATTCTCGCCCTCAAAGACTTATTGATCAT...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGCAAGGGATGTATTTTTaGTTGGGAAGTGACCATTTC +
Preference number: 5 (lower is better)
Translates to: ERPYSLLLNPGTPQTCTQQGMYF*LGSDHF
Trigger: GAAATGGTCACTTCCCAACAAAAAATACATCCCTTG...CTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp GGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAGCAAGGGATGTATTTTTaGTTGGGAAGTGACCATTTC +
Preference number: 5 (lower is better)
Translates to: GGAGRDLVDHLVGTLILQQGMYF*LGSDHF
Trigger: GAAATGGTCACTTCCCAACAAAAAATACATCCCTTG...CTGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTCAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp ATGTTTGAATACACTGTGATATTTGTAGGAACACCACACTATTGCTGTATCTCCGGGCACTTAGGTCCGTaGGCTCCGTTTCCCACAGTT +
Preference number: 5 (lower is better)
Translates to: MFEYTVIFVGTPHYCCISGHLGP*APFPTV
Trigger: AACTGTGGGAAACGGAGCCAACGGACCTAAGTGCCC...GGAGATACAGCAATAGTGTGGTGTTCCTACAAATATCACAGTGTATTCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCGCTGAGTCAGGAGACTaGCTTGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LFPTIIPKLSISSSVITSAESGD*LEPGRQ
Trigger: CTGCCTCCCAGGTTCAAGCAAGTCTCCTGACTCAGC...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675555.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTGGAATGCTTACAATATaGCAGGGACTGTACCAAGTG +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAGMLTI*QGLYQV
Trigger: CACTTGGTACAGTCCCTGCAATATTGTAAGCATTCC...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CAA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGACTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTGTCTTCAGCAACAAATaGAAGCTCGTTGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVVFSNK*KLVVST
Trigger: TGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGAC...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTGTCTTCAGCAACAAATaGAAGCTCGTTGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAVFSNK*KLVVST
Trigger: TGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGAC...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTTTGCTTGCCAGCCACTaGACGATGTCCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: CNDTVVSSHELVLQVTVILLASH*TMSLEI
Trigger: GATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAA...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACTTGCTTGCCAGCCACTaGACGATGTCCTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNLLASH*TMSLEI
Trigger: GATCTCCAAGGACATCGTCAAGTGGCTGGCAAGCAA...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTTGGGACTCCTCAGACTaGCACTCAGATTATCGTTTG +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTWDSSD*HSDYRL
Trigger: CAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCA...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TGGCGGCGCTGGAAGGGACCTTGTAGATCATTTAGTTGGCACCCTAATTTTACAATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: WRRWKGPCRSFSWHPNFTILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...TGTAAAATTAGGGTGCCAACTAAATGATCTACAAGGTCCCTTCCAGCGCCGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTTGCCTGAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 5 (lower is better)
Translates to: LLLNPGTPQTCTQIIVCLNPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...CAGGCAAACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GGGCTGGTAAATGAAGAGGAGGGATTAAAGACTCCCAAGCTCAAGTTCTTAACCAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 5 (lower is better)
Translates to: GLVNEEEGLKTPKLKFLTKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...GGTTAAGAACTTGAGCTTGGGAGTCTTTAATCCCTCCTCTTCATTTACCAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676288.1
CDS-3UTR CAA 90 bp GTCTGGAACTCTCTTGAAAGACCATACAGTCTACTGCTAAACCCTGGGACTCCTATGCCTGGCAGTCACTaGTGTATGTTTAATACAGTT +
Preference number: 5 (lower is better)
Translates to: VWNSLERPYSLLLNPGTPMPGSH*CMFNTV
Trigger: AACTGTATTAAACATACACAAGTGACTGCCAGGCAT...AGGAGTCCCAGGGTTTAGCAGTAGACTGTATGGTCTTTCAAGAGAGTTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: CNDTVVSSHELVLQVTVINCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TCATATACCATAATAATTCACCCTGTTAACAGTGTGCAGCCTCAGCAATATGACAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: SYTIIIHPVNSVQPQQYDNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...GTCATATTGCTGAGGCTGCACACTGTTAACAGGGTGAATTATTATGGTATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CAA 90 bp TACAGTCTACTGCTAAACCCTGGGACTCCTCAGACTTGCACTCAGATTATCGTTATGATCAATAAGTCTTaGAGGGCGAGAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: YSLLLNPGTPQTCTQIIVMINKS*RARMKV
Trigger: AACCTTCATTCTCGCCCTCAAAGACTTATTGATCAT...AACGATAATCTGAGTGCAAGTCTGAGGAGTCCCAGGGTTTAGCAGTAGACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAATCAAGTCCCTGTTATCTaGCTTGACATCGACAAGGAT +
Preference number: 5 (lower is better)
Translates to: SDLHSDYRLPALILDSANQVPVI*LDIDKD
Trigger: ATCCTTGTCGATGTCAAGCAAGATAACAGGGACTTG...ATTAGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSAILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAAGTCAGGAGACTTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: HMLFPTIIPKLSISSSVISQETC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAAGTCTCCTGACT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675555.1
CDS-3UTR CAA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCAATTGTTCCACGGGCTaGTACCACAGCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: LFPTIIPKLSISSSVITSNCSTG*YHSLFT
Trigger: GGTGAACAAGCTGTGGTACAAGCCCGTGGAACAATT...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAACTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313984.3
ENST00000612859.4
ENST00000635195.1
ENST00000635244.1
CDS-3UTR CAA 90 bp CTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAACCAGCCTTTGTGGAGATTTCTaGACACAAGGCCGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LFPTIIPKLSISSSVITSLCGDF*TQGRGG
Trigger: ACCTCCACGGCCTTGTGTCAAGAAATCTCCACAAAG...GCTGGTTATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCATGATCAATAAGTCTTaGAGGGCGAGAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLMINKS*RARMKV
Trigger: AACCTTCATTCTCGCCCTCAAAGACTTATTGATCAT...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACCAAGTCCCTGTTATCTaGCTTGACATCGACAAGGAT +
Preference number: 5 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYQVPVI*LDIDKD
Trigger: ATCCTTGTCGATGTCAAGCAAGATAACAGGGACTTG...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TCCTCAGACTTGCACTCAGATTATCGTTTGCCTGCCCTGATTTTAGACTCTGCTAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 5 (lower is better)
Translates to: SSDLHSDYRLPALILDSANPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...AGCAGAGTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTGCAAGTCTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTGATAGGCTCCATGACAATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCCAAGGGATGTATTTTTaGTTGGGAAGTGACCATTTC +
Preference number: 5 (lower is better)
Translates to: LIGSMTIQKVKGLLSRLLQGMYF*LGSDHF
Trigger: GAAATGGTCACTTCCCAACAAAAAATACATCCCTTG...GAGAAGACGTGACAGCAATCCCTTCACCTTTTGAATTGTCATGGAGCCTATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp ATTCAAAAGGTGAAGGGATTGCTGTCACGTCTTCTCAAAGTTCCTGTGTCAGACCATGGGTCTGTTTGTTaGATTTTAAGGGTAAGCTAC +
Preference number: 5 (lower is better)
Translates to: IQKVKGLLSRLLKVPVSDHGSVC*ILRVSY
Trigger: GTAGCTTACCCTTAAAATCAAACAAACAGACCCATG...GTCTGACACAGGAACTTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp AATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAGTACGGTTAAAGGGCACCATTaGCAAAGCATGTATCTGATA +
Preference number: 5 (lower is better)
Translates to: NGQTWNTCYSKETDTQSTVKGHH*QSMYLI
Trigger: TATCAGATACATGCTTTGCAAATGGTGCCCTTTAAC...CGTACTCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CAA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTCACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 5 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTCATGGGTCTGTTTGTTaGATTTTAAGGGTAAGCTAC +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTHGSVC*ILRVSY
Trigger: GTAGCTTACCCTTAAAATCAAACAAACAGACCCATG...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTACGAATGGACTTTTCTaGTCTTTTGATAGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTTNGLF*SFDRLH
Trigger: ATGGAGCCTATCAAAAGACAAGAAAAGTCCATTCGT...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACATGATCAATAAGTCTTaGAGGGCGAGAATGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYMINKS*RARMKV
Trigger: AACCTTCATTCTCGCCCTCAAAGACTTATTGATCAT...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp AACACCACACTATTGCTGTATCTCCAGCTAAAGCTTCAAGGAAACTCTATTTCTGTCTTCAGCAACAAATaGAAGCTCGTTGTTTCCACA +
Preference number: 5 (lower is better)
Translates to: NTTLLLYLQLKLQGNSISVFSNK*KLVVST
Trigger: TGTGGAAACAACGAGCTTCAATTTGTTGCTGAAGAC...AGAAATAGAGTTTCCTTGAAGCTTTAGCTGGAGATACAGCAATAGTGTGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTTGGTTGGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 5 (lower is better)
Translates to: FGWSFWEMSLKLGETSSTNPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...AGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACCAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAACAAAAGGTGAAGGGATaGCTGTCACGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEQKVKG*LSRLLK
Trigger: TTTGAGAAGACGTGACAGCAATCCCTTCACCTTTTG...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACATGCCTGGCAGTCACTaGTGTATGTTTAATACAGTT +
Preference number: 5 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYMPGSH*CMFNTV
Trigger: AACTGTATTAAACATACACAAGTGACTGCCAGGCAT...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366600.8
ENST00000635453.2
CDS-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATACACTCAGATTATCGTTaGCCTGCCCTGATTTTAGAC +
Preference number: 5 (lower is better)
Translates to: HMLFPTIIPKLSISSSVIHSDYR*PALILD
Trigger: GTCTAAAATCAGGGCAGGCAAACGATAATCTGAGTG...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TGCAATGATACTGTGGTCTCATCACATGAGCTAGTTTTACAGGTAACTGTCATTATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: CNDTVVSSHELVLQVTVIILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...AATGACAGTTACCTGTAAAACTAGCTCATGTGATGAGACCACAGTATCATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCIELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTAGCTCTACAGAGCTATCCTGCAATCCAGGTTGAAATTCAAACTCTCAGTTACGAACTGAGAATCATATaGGTTCCTCTTCAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: LALQSYPAIQVEIQTLSYELRII*VPLQVS
Trigger: ACTAACTTGAAGAGGAACCAATATGATTCTCAGTTC...GTAACTGAGAGTTTGAATTTCAACCTGGATTGCAGGATAGCTCTGTAGAGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp GGTCATTTTGGGAAATGTCCCTTAAACTTGGGGAGACATCCTCTACTATGTATAAACCCTGAGAGGTATTaGCTTTTATTCATACTCACA +
Preference number: 5 (lower is better)
Translates to: GHFGKCPLNLGRHPLLCINPERY*LLFILT
Trigger: TGTGAGTATGAATAAAAGCAAATACCTCTCAGGGTT...TATACATAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTTCCCAAAATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp TTAGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAAAATGTCCCTTAAACTaGGGGAGACATCCTCTACTA +
Preference number: 5 (lower is better)
Translates to: LVQVAHFRDPQNLTLFPEKCPLN*GRHPLL
Trigger: TAGTAGAGGATGTCTCCCCAAGTTTAAGGGACATTT...TTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp AGTTCAAGTTGCCCACTTCAGAGATCCACAAAATCTGACATTATTTCCAGAAACCATGGGTCTGTTTGTTaGATTTTAAGGGTAAGCTAC +
Preference number: 5 (lower is better)
Translates to: SSSCPLQRSTKSDIISRNHGSVC*ILRVSY
Trigger: GTAGCTTACCCTTAAAATCAAACAAACAGACCCATG...GTTTCTGGAAATAATGTCAGATTTTGTGGATCTCTGAAGTGGGCAACTTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp TACAAAATGGACAGACCTGGAACACATGTTACAGCAAAGAAACTGACACACAGAAATAGCCAATCAAGCTaGAAAAAGAACAAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: YKMDRPGTHVTAKKLTHRNSQSS*KKNKVG
Trigger: TCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTATT...TCTGTGTGTCAGTTTCTTTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS-3UTR CAA 90 bp CACATGCTTTTCCCTACAATTATACCTAAGCTGAGTATATCTTCTTCTGTGATAATCCTGCAATCCAGGTaGAAATTCAAACTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: HMLFPTIIPKLSISSSVIILQSR*KFKLSV
Trigger: AACTGAGAGTTTGAATTTCAACCTGGATTGCAGGAT...TATCACAGAAGAAGATATACTCAGCTTAGGTATAATTGTAGGGAAAAGCATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
ENST00000675555.1
ENST00000676288.1
CDS-3UTR CAA 90 bp AACTCTCAGTTACTACTACAGATTTCTGAACTAGGCCAAGTTTTAACCAAAAACACGAATGGACTTTTCTaGTCTTTTGATAGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: NSQLLLQISELGQVLTKNTNGLF*SFDRLH
Trigger: ATGGAGCCTATCAAAAGACAAGAAAAGTCCATTCGT...GTTTTTGGTTAAAACTTGGCCTAGTTCAGAAATCTGTAGTAGTAACTGAGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366600.8
ENST00000635453.2
ENST00000675193.1
CDS-3UTR CAA 90 bp AAAGAAGTACTGATACATACAAAATGGACAGACCTGGAACACATGTTACAGCAAAATAGCCAATCAAGCTaGAAAAAGAACAAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: KEVLIHTKWTDLEHMLQQNSQSS*KKNKVG
Trigger: TCCAACCTTGTTCTTTTTCAAGCTTGATTGGCTATT...TTGCTGTAACATGTGTTCCAGGTCTGTCCATTTTGTATGTATCAGTACTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612859.4
ENST00000635195.1
CDS TCA 72 bp CCGGCGGAGAGGGAGGGGACCTGCAAGTGCGGAGACTaGGGGGCGGCGGCTGACGAGCGACCACTCCGAGCA +
Preference number: 6 (lower is better)
Translates to: PAEREGTCKCGD*GAAADERPLRA
Trigger: TGCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313984.3
ENST00000366600.8
ENST00000494378.1
ENST00000635244.1
ENST00000635360.1
ENST00000635453.2
ENST00000675193.1
ENST00000676288.1
CDS GCA 72 bp CTCTGGAGTGCTGCCCTGGTACAAGAAAATATCAAGTaGCTGCCCCTGAAAGCACACGCCCACTCCTATGAA +
Preference number: 6 (lower is better)
Translates to: LWSAALVQENIK*LPLKAHAHSYE
Trigger: TTCATAGGAGTGGGCGTGTGCTTTCAGGGGCAGGCACTTGATATTTTCTTGTACCAGGGCAGCACTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CCA 72 bp CTGAAAGCACACGCCCACTCCTATGAAGGACTGCATTaGTACTACAGTCTTTTCCTGCCATCCTGTACCTCT +
Preference number: 6 (lower is better)
Translates to: LKAHAHSYEGLH*YYSLFLPSCTS
Trigger: AGAGGTACAGGATGGCAGGAAAAGACTGTAGTACCAATGCAGTCCTTCATAGGAGTGGGCGTGTGCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS GCA 72 bp CATCCACAGTTGGTACCTTCATCTATCACTCTGGAGTaGTGCCCTGGTACAAGAAAATATCAAGTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: HPQLVPSSITLE*CPGTRKYQVPA
Trigger: GGCAGGCACTTGATATTTTCTTGTACCAGGGCAGCACTCCAGAGTGATAGATGAAGGTACCAACTGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CAA 90 bp TCAGGAGGTTTGAATACAGAGTGCTATGTTTTAGCCCATCCACAGTaGGTACCTTCATCTATCACTCTGGAGTGCTGCCCTGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: SGGLNTECYVLAHPQ*VPSSITLECCPGTR
Trigger: TCTTGTACCAGGGCAGCACTCCAGAGTGATAGATGAAGGTACCAACTGTGGATGGGCTAAAACATAGCACTCTGTATTCAAACCTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS GCA 72 bp GGCCTCATGAAGTCCTCAGGAGGTTTGAATACAGAGTaGTATGTTTTAGCCCATCCACAGTTGGTACCTTCA +
Preference number: 6 (lower is better)
Translates to: GLMKSSGGLNTE*YVLAHPQLVPS
Trigger: TGAAGGTACCAACTGTGGATGGGCTAAAACATAGCACTCTGTATTCAAACCTCCTGAGGACTTCATGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CAA 72 bp TTGAATACAGAGTGCTATGTTTTAGCCCATCCACAGTaGGTACCTTCATCTATCACTCTGGAGTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: LNTECYVLAHPQ*VPSSITLECCP
Trigger: AGGGCAGCACTCCAGAGTGATAGATGAAGGTACCAACTGTGGATGGGCTAAAACATAGCACTCTGTATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CAA 72 bp TCAGGACCAGGGAACTGTATCCGTAAAGTACTGTTCTaGGTAACTTCCCACTCTGCCATCTATAGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: SGPGNCIRKVLF*VTSHSAIYRSS
Trigger: TGAACTTCTATAGATGGCAGAGTGGGAAGTTACCAAGAACAGTACTTTACGGATACAGTTCCCTGGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675193.1
CDS CAA 90 bp GCTATCATCCACAACTGTTCACCCTTTGGAGAAATTTTATTTAACTaGGAAACATGGCCCATCTCTATCATTAACCTGTCTGCACTGACT +
Preference number: 6 (lower is better)
Translates to: AIIHNCSPFGEILFN*ETWPISIINLSALT
Trigger: AGTCAGTGCAGACAGGTTAATGATAGAGATGGGCCATGTTTCCAAGTTAAATAAAATTTCTCCAAAGGGTGAACAGTTGTGGATGATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CCA 72 bp TCACCCTTTGGAGAAATTTTATTTAACTTGGAAACATaGCCCATCTCTATCATTAACCTGTCTGCACTGACT +
Preference number: 6 (lower is better)
Translates to: SPFGEILFNLET*PISIINLSALT
Trigger: AGTCAGTGCAGACAGGTTAATGATAGAGATGGGCCATGTTTCCAAGTTAAATAAAATTTCTCCAAAGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CAA 72 bp CACAACTGTTCACCCTTTGGAGAAATTTTATTTAACTaGGAAACATGGCCCATCTCTATCATTAACCTGTCT +
Preference number: 6 (lower is better)
Translates to: HNCSPFGEILFN*ETWPISIINLS
Trigger: AGACAGGTTAATGATAGAGATGGGCCATGTTTCCAAGTTAAATAAAATTTCTCCAAAGGGTGAACAGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1
CDS CAA 72 bp AATGGAGGTTCAGATACAAATGAAAAGGAGATCCCTTaGACACTGACAGAATTAACATATAGTTTCAACTAC +
Preference number: 6 (lower is better)
Translates to: NGGSDTNEKEIP*TLTELTYSFNY
Trigger: GTAGTTGAAACTATATGTTAATTCTGTCAGTGTCAAAGGGATCTCCTTTTCATTTGTATCTGAACCTCCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494378.1
ENST00000635360.1