RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AZU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172232

Ensembl transcript IDs: ENST00000233997.4, ENST00000592205.5, ENST00000620695.2, ENST00000633060.1

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTCCCCCTGGGCAGGCAGCAGCTGTGTCAGGGCGTCCCAGGGCCTaGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCC +
Preference number: 1 (lower is better)
Translates to: RPPGQAAAVSGRPRA*LPRHPRTAEASCCP
Trigger: GGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGCCCTGACACAGCTGCTGCCTGCCCAGGGGGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR GCA 90 bp GGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTaGTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCG +
Preference number: 1 (lower is better)
Translates to: GNHTPESLSDRLYHA*WVPNPQHRRGSQPA
Trigger: CGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CCA 90 bp TTAACTGCTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTaGCACCTCCAGGCTGGGCCAGGTGCCCCTCCCCTGGCAATCACA +
Preference number: 1 (lower is better)
Translates to: LTASGLWDQLLSGAS*HLQAGPGAPPLAIT
Trigger: TGTGATTGCCAGGGGAGGGGCACCTGGCCCAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAGCAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CCA 90 bp CATGGCTCTTCTCTTTCTCTGCCCTGGTTAACTGCTAGTGGACTTTaGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: HGSSLSLPWLTASGL*DQLLSGASWHLQAG
Trigger: CCCAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGAAGAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGGGGCGTCCCAGGGCCTaGCTCCCACGCCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGGRPRA*LPRHPR
Trigger: TCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGCCC...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: EERSASLLQPGPLWPERGAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
3UTR-3UTR GCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGATGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 2 (lower is better)
Translates to: GPGSHATPELQRPLAAPGCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGGGCGTCCCAGGGCCTaGCTCCCACGCCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSGRPRA*LPRHPR
Trigger: TCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGCCC...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: AEERSASLLQPGPLWPERAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
3UTR-3UTR GCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCCCAGGCTGGGCCAGGTaGCCCTCCCCTGGCAATCAC +
Preference number: 2 (lower is better)
Translates to: TRVKKSGPRPQGPREKEAPGWAR*PSPGNH
Trigger: GTGATTGCCAGGGGAGGGGCACCTGGCCCAGCCTGG...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCAGGCTGGGCCAGGTaGCCCTCCCCTGGCAATCAC +
Preference number: 2 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGPGWAR*PSPGNH
Trigger: GTGATTGCCAGGGGAGGGGCACCTGGCCCAGCCTGG...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGACTCTACCATGCCTGCTaGGTCCCCAACCCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: GPGSHATPELQRPLAAPGLYHAC*VPNPQH
Trigger: GTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAG...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGCCCTCAGCCTGCACTTaGTTTCTCCTGCCACGGAGA +
Preference number: 2 (lower is better)
Translates to: TGPQGKGGHAVGQALADEPSACT*FLLPRR
Trigger: TCTCCGTGGCAGGAGAAAGCAAGTGCAGGCTGAGGG...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCTGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 2 (lower is better)
Translates to: TRVKKSGPRPQGPREKEACGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR TCA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGGGAACCTACAAGTCCTaGTCCAGCCCCAGGGCCTTT +
Preference number: 2 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGGTYKS*SSPRAF
Trigger: AAAGGCCCTGGGGCTGGATCAGGACTTGTAGGTTCC...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCACAGCCCCAGGGCCTTTaGATGGCTCTTCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPQPQGL*MALLFL
Trigger: GAGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTG...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 2 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
3UTR-3UTR TCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCGGAACCTACAAGTCCTaGTCCAGCCCCAGGGCCTTT +
Preference number: 2 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPGTYKS*SSPRAF
Trigger: AAAGGCCCTGGGGCTGGATCAGGACTTGTAGGTTCC...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCGTGCCGCCCTCAGCCTaGACTTGCTTTCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGVPPSA*TCFLLP
Trigger: TGGCAGGAGAAAGCAAGTGCAGGCTGAGGGCGGCAC...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGACGCCACCCCAGAACTaGAGAGGCCTCTTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSTPPQN*RGLLLP
Trigger: GGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGT...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 2 (lower is better)
Translates to: AEERSASLLQPGPLWPERCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
3UTR-3UTR GCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LVDFGISCFLELPGTSRLAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTCCAGGAGGCGGAGGTTaGAGTGAGCCGCCGAGATCA +
Preference number: 2 (lower is better)
Translates to: PPLAITRLSPSVTGSTMPPGGGG*SEPPRS
Trigger: TGATCTCGGCGGCTCACTGCAACCTCCGCCTCCTGG...AGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCATCTCTTTCTCTGCCCTaGTTAACTGCTAGTGGACTT +
Preference number: 2 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPSLSLP*LTASGL
Trigger: AAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGCCCAGGGCCTTTGCATaGCTCTTCTCTTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSPRAFA*LFSFSA
Trigger: GGCAGAGAAAGAGAAGAGCCATGCAAAGGCCCTGGG...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGATCTCTTTCTCTGCCCTaGTTAACTGCTAGTGGACTT +
Preference number: 2 (lower is better)
Translates to: GPGSHATPELQRPLAAPGSLSLP*LTASGL
Trigger: AAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGACTTTGGGATCAGTTaGTTTCTGGAGCTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSDFGIS*FLELPG
Trigger: GCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTC...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCGGATCAGTTGCTTTCTaGAGCTTCCTGGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: WPRSRVVENTIDPVSEERGSVAF*SFLAPP
Trigger: TGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCC...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGTGCCGCCCTCAGCCTaGACTTGCTTTCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LVDFGISCFLELPGTSRLVPPSA*TCFLLP
Trigger: TGGCAGGAGAAAGCAAGTGCAGGCTGAGGGCGGCAC...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCGACTTTGGGATCAGTTaGTTTCTGGAGCTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: WPRSRVVENTIDPVSEERDFGIS*FLELPG
Trigger: GCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTC...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR GCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGACGCCACCCCAGAACTaGAGAGGCCTCTTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKTPPQN*RGLLLP
Trigger: GGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGT...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CAA 90 bp TCTCTTTCTCTGCCCTGGTTAACTGCTAGTGGACTTTGGGATCAGTaGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGGCCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: SLSLPWLTASGLWDQ*LSGASWHLQAGPGA
Trigger: GGCACCTGGCCCAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGCCCAGGGCCTTTGCATaGCTCTTCTCTTTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKPRAFA*LFSFSA
Trigger: GGCAGAGAAAGAGAAGAGCCATGCAAAGGCCCTGGG...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CAA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCACCAGCCCCAGGGCCTTaGCATGGCTCTTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPPAPGP*HGSSLS
Trigger: AGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTGG...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR GCA 72 bp GCGTCCCAGGGCCTGGCTCCCACGCCACCCCAGAACTaGAGAGGCCTCTTGCTGCCCCTGGAACCTACAAGT +
Preference number: 3 (lower is better)
Translates to: ASQGLAPTPPQN*RGLLLPLEPTS
Trigger: ACTTGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CAA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGAACTGCAGAGGCCTCTaGCTGCCCCTGGAACCTACA +
Preference number: 3 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGNCRGL*LPLEPT
Trigger: TGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTT...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR GCA 72 bp ACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTaGTGGGTCCCCAACCCCCAGCACAGACGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: TPESLSDRLYHA*WVPNPQHRRGS
Trigger: TGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CCA 72 bp CCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTGCTaGGTCCCCAACCCCCAGCACAGACGTGGCTCACAG +
Preference number: 3 (lower is better)
Translates to: PESLSDRLYHAC*VPNPQHRRGSQ
Trigger: CTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAGCCGGTCACTGAGGGACTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR GCA 72 bp CTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTaGCCCTGGAACCTACAAGTCCTGATCCAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: LPRHPRTAEASC*PWNLQVLIQPQ
Trigger: CTGGGGCTGGATCAGGACTTGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR GCA 72 bp TGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTaGTGCCCCTGGAACCTACAAGTCCTGATCCAGCCC +
Preference number: 3 (lower is better)
Translates to: WLPRHPRTAEAS*CPWNLQVLIQP
Trigger: GGGCTGGATCAGGACTTGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR-3UTR CAA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCCCAGCCCCAGGGCCTTaGCATGGCTCTTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: TRVKKSGPRPQGPREKEAPAPGP*HGSSLS
Trigger: AGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTGG...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CCA 72 bp TCTCTTTCTCTGCCCTGGTTAACTGCTAGTGGACTTTaGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTC +
Preference number: 3 (lower is better)
Translates to: SLSLPWLTASGL*DQLLSGASWHL
Trigger: GAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGTGCCACCGCGGCGGGTaGGCACACCGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: TGPQGKGGHAVGQALADECHRGG*AHRCTR
Trigger: ACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCA...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGAGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPGSHATPELQRPLAAPGAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGCCAGGAACGGGAACTaGCGGGGCCTCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPARNGN*RGLAFR
Trigger: CCGGAAGGCGAGGCCCCGCCAGTTCCCGTTCCTGGC...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGCCCCAGCCGGCCACCTaGCATCTGGTGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TGPQGKGGHAVGQALADEPQPAT*HLVPAS
Trigger: GGAAGCCGGCACCAGATGCCAGGTGGCCGGCTGGGG...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCACCAGGCTGGGCCAGGTaGCCCTCCCCTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPPGWAR*PSPGNH
Trigger: GTGATTGCCAGGGGAGGGGCACCTGGCCCAGCCTGG...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCGGGCGTCCCAGGGCCTaGCTCCCACGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPGRPRA*LPRHPR
Trigger: TCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGCCC...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCATGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGCCGTGGGAGGTGGGTaGGGAGCGCCGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGAVGGG*GAPEVW
Trigger: CCACACCTCCGGCGCTCCGCACCCACCTCCCACGGC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCACCAGGAGGCGGAGGTTaGAGTGAGCCGCCGAGATCA +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPPGGGG*SEPPRS
Trigger: TGATCTCGGCGGCTCACTGCAACCTCCGCCTCCTGG...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGATCACGAAGCGGGCATaGATCAGGGCACCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TGPQGKGGHAVGQALADEITKRA*IRAPPQ
Trigger: CTGCGGGGGTGCCCTGATCCATGCCCGCTTCGTGAT...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCGGGGTTCTGGCTTTaGAAGCAGCTGGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGPGFWL*KQLAAV
Trigger: GACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGG...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGATCGTCACGCTGCTGGTaGGGTTGGCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPGSHATPELQRPLAAPGSSRCW*GWPHGP
Trigger: TGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGA...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTGCCACCGCGGCGGGTaGGCACACCGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGCHRGG*AHRCTR
Trigger: ACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTGCCCCCGTCCCCATTaGAGATGCCACCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGCPRPH*RCHRGG
Trigger: CCCGCCGCGGTGGCATCTGCAATGGGGACGGGGGCA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGCCAGGAACGGGAACTaGCGGGGCCTCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGARNGN*RGLAFR
Trigger: CCGGAAGGCGAGGCCCCGCCAGTTCCCGTTCCTGGC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCACTAACCCCGGGGTTCTaGCTTTGGAAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPLTPGF*LWKQLA
Trigger: GGCCAGCTGCTTCCAAAGCCAGAACCCCGGGGTTAG...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTCCCCAGCCGGCCACCTaGCATCTGGTGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAPQPAT*HLVPAS
Trigger: GGAAGCCGGCACCAGATGCCAGGTGGCCGGCTGGGG...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGACGGTGCACACGTTGTTaGGGCGACACTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPGSHATPELQRPLAAPGRCTRC*GDTGPR
Trigger: CCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCG...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGAAGGAGGCCACGCCGTaGGCCAGGCCCTCGCAGACG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGKEATP*ARPSQT
Trigger: CGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTT...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTAAGGAGGCCACGCCGTaGGCCAGGCCCTCGCAGACG +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAKEATP*ARPSQT
Trigger: CGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTT...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGGGCGTCCCAGGGCCTaGCTCCCACGCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHGRPRA*LPRHPR
Trigger: TCTGGGGTGGCGTGGGAGCCAGGCCCTGGGACGCCC...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCTCGTCACGCTGCTGGTaGGGTTGGCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPSSRCW*GWPHGP
Trigger: TGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGA...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCTGCCACCGCGGCGGGTaGGCACACCGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERCHRGG*AHRCTR
Trigger: ACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCA...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTGCCACCGCGGCGGGTaGGCACACCGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERCHRGG*AHRCTR
Trigger: ACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR GCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCAACGTCTGGCGGGACTaGCTCTCCCGCCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGNVWRD*LSRRLR
Trigger: CCTGAGGCGGCGGGAGAGGCAGTCCCGCCAGACGTT...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGAACGTCTGGCGGGACTaGCTCTCCCGCCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGNVWRD*LSRRLR
Trigger: CCTGAGGCGGCGGGAGAGGCAGTCCCGCCAGACGTT...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTGCCCCCGTCCCCATTaGAGATGCCACCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERCPRPH*RCHRGG
Trigger: CCCGCCGCGGTGGCATCTGCAATGGGGACGGGGGCA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR GCA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGGTGCCGCCCTCAGCCTaGACTTGCTTTCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGVPPSA*TCFLLP
Trigger: TGGCAGGAGAAAGCAAGTGCAGGCTGAGGGCGGCAC...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCCCAGGAGGCGGAGGTTaGAGTGAGCCGCCGAGATCA +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPPGGGG*SEPPRS
Trigger: TGATCTCGGCGGCTCACTGCAACCTCCGCCTCCTGG...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGCCCCAGCCGGCCACCTaGCATCTGGTGCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERPQPAT*HLVPAS
Trigger: GGAAGCCGGCACCAGATGCCAGGTGGCCGGCTGGGG...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCCTCTACCATGCCTGCTaGGTCCCCAACCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPLYHAC*VPNPQH
Trigger: GTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAG...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGGTCACAGTCACGTTaGCAAACCTGGGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPGSQSR*QTWENG
Trigger: CCCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCC...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGCCCCGCAGAAGTGCCTaGCTTGATTCTGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: TGPQGKGGHAVGQALADEPRRSA*LDSEWR
Trigger: CCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGG...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGTCCACCGTGGCGTTCTaGAGAGGCAGTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGSTVAF*RGSGSI
Trigger: GATACTGCCACTGCCTCTGCAGAACGCCACGGTGGA...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCACCTGGCATCTGGTaGCGGCTTCCACCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPPGIW*RLPPWR
Trigger: ACGCCACGGTGGAAGCCGGCACCAGATGCCAGGTGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCACCTGGCATCTGGTaGCGGCTTCCACCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPPGIW*RLPPWR
Trigger: ACGCCACGGTGGAAGCCGGCACCAGATGCCAGGTGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGGCACTTGCTTTCTCCTaGCACGGAGAGCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: TGPQGKGGHAVGQALADEALAFS*HGELST
Trigger: GGTACTGAGCTCTCCGTGGCAGGAGAAAGCAAGTGC...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCGTGCCGCCCTCAGCCTaGACTTGCTTTCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPVPPSA*TCFLLP
Trigger: TGGCAGGAGAAAGCAAGTGCAGGCTGAGGGCGGCAC...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTGTCCAAAAGGGGGCTaGAGCCGGCCCTCGAGGACG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGCPKGG*SRPSRT
Trigger: CGTCCTCGAGGGCCGGCTCCAGCCCCCTTTTGGACA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCATCACGAAGCGGGCATaGATCAGGGCACCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TRVKKSGPRPQGPREKEAITKRA*IRAPPQ
Trigger: CTGCGGGGGTGCCCTGATCCATGCCCGCTTCGTGAT...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCGGGGTTCTGGCTTTaGAAGCAGCTGGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPGFWL*KQLAAV
Trigger: GACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCGGGGTTCTGGCTTTaGAAGCAGCTGGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPGFWL*KQLAAV
Trigger: GACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTCCGGGGTTCTGGCTTTaGAAGCAGCTGGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAPGFWL*KQLAAV
Trigger: GACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGG...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCCGGTGCACACGTTGTTaGGGCGACACTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TRVKKSGPRPQGPREKEARCTRC*GDTGPR
Trigger: CCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCG...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCTCTACCATGCCTGCTaGGTCCCCAACCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGLYHAC*VPNPQH
Trigger: GTGCTGGGGGTTGGGGACCCAGCAGGCATGGTAGAG...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPSRSCC*WKTSGG
Trigger: CCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGA...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTCGTCACGCTGCTGGTaGGGTTGGCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGSSRCW*GWPHGP
Trigger: TGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTCGTCACGCTGCTGGTaGGGTTGGCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGSSRCW*GWPHGP
Trigger: TGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCAGGGAGCACTCACATTaGAGATGCCACCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGREHSH*RCHRGG
Trigger: CCCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCT...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTACGCCACCCCAGAACTaGAGAGGCCTCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIATPPQN*RGLLLP
Trigger: GGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGT...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCATCACGAAGCGGGCATaGATCAGGGCACCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGITKRA*IRAPPQ
Trigger: CTGCGGGGGTGCCCTGATCCATGCCCGCTTCGTGAT...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGATCACGAAGCGGGCATaGATCAGGGCACCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGITKRA*IRAPPQ
Trigger: CTGCGGGGGTGCCCTGATCCATGCCCGCTTCGTGAT...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTGCCGGCTTCCACCGTaGCGTTCTGCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGCRLPP*RSAEAV
Trigger: CACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCGGTGCACACGTTGTTaGGGCGACACTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGRCTRC*GDTGPR
Trigger: CCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGGTGCACACGTTGTTaGGGCGACACTGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGRCTRC*GDTGPR
Trigger: CCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATTGTGGAGGGCGGGGCTaGGCTCCATGGGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHCGGRG*APWEVT
Trigger: TGTGACCTCCCATGGAGCCCAGCCCCGCCCTCCACA...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTGTCCTGGCCAAACGTaGGCCTCAGCTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGCPGQT*ASALPW
Trigger: CCACGGGAGAGCTGAGGCCCACGTTTGGCCAGGACA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGATGTCCAAAAGGGGGCTaGAGCCTGTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GPGSHATPELQRPLAAPGCPKGG*SLSIFP
Trigger: AGGGAAGATGGACAGGCTCCAGCCCCCTTTTGGACA...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CAA 72 bp CTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTaGCTGCCCCTGGAACCTACAAGTCCTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LAPTPPQNCRGL*LPLEPTSPDPA
Trigger: GGCTGGATCAGGACTTGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGCCTCACGGTCCAGCTaGAGCAGCATCAGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGASRSS*SSIRSF
Trigger: GAACGACCTGATGCTGCTTCAGCTGGACCGTGAGGC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCCCCTCAGCCTGCACTTaGTTTCTCCTGCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: TRVKKSGPRPQGPREKEAPSACT*FLLPRR
Trigger: TCTCCGTGGCAGGAGAAAGCAAGTGCAGGCTGAGGG...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp CCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTACGCCACCCCAGAACTaGAGAGGCCTCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPLAITRLSPSVTGSTMPTPPQN*RGLLLP
Trigger: GGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGT...AGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGGCTTTGGAAGCAGCTaGCCGCGGTCATCACGAAGC +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGGFGSS*PRSSRS
Trigger: GCTTCGTGATGACCGCGGCCAGCTGCTTCCAAAGCC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGGCTTTGGAAGCAGCTaGCCGCGGTCATCACGAAGC +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGGFGSS*PRSSRS
Trigger: GCTTCGTGATGACCGCGGCCAGCTGCTTCCAAAGCC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCTAACCCCGGGGTTCTaGCTTTGGAAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGLTPGF*LWKQLA
Trigger: GGCCAGCTGCTTCCAAAGCCAGAACCCCGGGGTTAG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTGCCGGCTTCCACCGTaGCGTTCTGCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERCRLPP*RSAEAV
Trigger: CACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTTGTTGGGGCGACACTaGTCCTCGGGGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGLLGRH*SSGVTV
Trigger: GACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTTGTTGGGGCGACACTaGTCCTCGGGGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGLLGRH*SSGVTV
Trigger: GACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATTGTCCTGGCCAAACGTaGGCCTCAGCTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHCPGQT*ASALPW
Trigger: CCACGGGAGAGCTGAGGCCCACGTTTGGCCAGGACA...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATCCATCCACCCTGTCCTaGCCAAACGTGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHPSTLS*PNVGLS
Trigger: GCTGAGGCCCACGTTTGGCCAGGACAGGGTGGATGG...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGAGGATCAGTTGCTTTCTaGAGCTTCCTGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GPGSHATPELQRPLAAPGGSVAF*SFLAPP
Trigger: TGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCC...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGSRSCC*WKTSGG
Trigger: CCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGSRSCC*WKTSGG
Trigger: CCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGA...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp ACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCGGGTCACAGTCACGTTaGCAAACCTGGGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: TRVKKSGPRPQGPREKEAGSQSR*QTWENG
Trigger: CCCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCC...GGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCGGTCCCGGGTTGTTaGGAACACCATCGATCCAGT +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPVPGC*EHHRSS
Trigger: ACTGGATCGATGGTGTTCTCAACAACCCGGGACCGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCGGTCCCGGGTTGTTaGGAACACCATCGATCCAGT +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPVPGC*EHHRSS
Trigger: ACTGGATCGATGGTGTTCTCAACAACCCGGGACCGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTGGAACCTACAAGTCCTaGTCCAGCCCCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAGTYKS*SSPRAF
Trigger: AAAGGCCCTGGGGCTGGATCAGGACTTGTAGGTTCC...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCCGCAGAAGTGCCTaGCTTGATTCTGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGPRRSA*LDSEWR
Trigger: CCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGG...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCTCCACCGTGGCGTTCTaGAGAGGCAGTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGSTVAF*RGSGSI
Trigger: GATACTGCCACTGCCTCTGCAGAACGCCACGGTGGA...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCTCAGCCTGCACTTaGTTTCTCCTGCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPSACT*FLLPRR
Trigger: TCTCCGTGGCAGGAGAAAGCAAGTGCAGGCTGAGGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGGCTTTGGAAGCAGCTaGCCGCGGTCATCACGAAGC +
Preference number: 4 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHGFGSS*PRSSRS
Trigger: GCTTCGTGATGACCGCGGCCAGCTGCTTCCAAAGCC...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGCTAACCCCGGGGTTCTaGCTTTGGAAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERLTPGF*LWKQLA
Trigger: GGCCAGCTGCTTCCAAAGCCAGAACCCCGGGGTTAG...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTTGTTGGGGCGACACTaGTCCTCGGGGGTCACAGTC +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERLLGRH*SSGVTV
Trigger: GACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGAAGGAGGCCACGCCGTaGGCCAGGCCCTCGCAGACG +
Preference number: 4 (lower is better)
Translates to: LVDFGISCFLELPGTSRLKEATP*ARPSQT
Trigger: CGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTT...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERSRSCC*WKTSGG
Trigger: CCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGA...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGGGTCACAGTCACGTTaGCAAACCTGGGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGGSQSR*QTWENG
Trigger: CCCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGGGTCACAGTCACGTTaGCAAACCTGGGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGGSQSR*QTWENG
Trigger: CCCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR TCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGCCGGTCCCGGGTTGTTaGGAACACCATCGATCCAGT +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERPVPGC*EHHRSS
Trigger: ACTGGATCGATGGTGTTCTCAACAACCCGGGACCGG...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR TCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCCGGTCCCGGGTTGTTaGGAACACCATCGATCCAGT +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERPVPGC*EHHRSS
Trigger: ACTGGATCGATGGTGTTCTCAACAACCCGGGACCGG...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR TCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCGGAACCTACAAGTCCTaGTCCAGCCCCAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERGTYKS*SSPRAF
Trigger: AAAGGCCCTGGGGCTGGATCAGGACTTGTAGGTTCC...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCCGCAGAAGTGCCTaGCTTGATTCTGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPRRSA*LDSEWR
Trigger: CCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR GCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTCCACCGTGGCGTTCTaGAGAGGCAGTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERSTVAF*RGSGSI
Trigger: GATACTGCCACTGCCTCTGCAGAACGCCACGGTGGA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR GCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCTCCACCGTGGCGTTCTaGAGAGGCAGTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERSTVAF*RGSGSI
Trigger: GATACTGCCACTGCCTCTGCAGAACGCCACGGTGGA...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGVLQRQ*QYRHAA
Trigger: AGCAGCGTGACGATACTGCCACTGCCTCTGCAGAAC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAVLQRQ*QYRHAA
Trigger: AGCAGCGTGACGATACTGCCACTGCCTCTGCAGAAC...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGVLQRQ*QYRHAA
Trigger: AGCAGCGTGACGATACTGCCACTGCCTCTGCAGAAC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CCA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCAGGGCCTTTGCATaGCTCTTCTCTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EERSASLLQPGPLWPERGPRAFA*LFSFSA
Trigger: GGCAGAGAAAGAGAAGAGCCATGCAAAGGCCCTGGG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCGACTTTGGGATCAGTTaGTTTCTGGAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGDFGIS*FLELPG
Trigger: GCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTC...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCTGTCCAAAAGGGGGCTaGAGCCTGTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WPRSRVVENTIDPVSEERCPKGG*SLSIFP
Trigger: AGGGAAGATGGACAGGCTCCAGCCCCCTTTTGGACA...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGGATCAGTTGCTTTCTaGAGCTTCCTGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGGSVAF*SFLAPP
Trigger: TGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGCCACCTGGCATCTGGTaGCGGCTTCCACCGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKPPGIW*RLPPWR
Trigger: ACGCCACGGTGGAAGCCGGCACCAGATGCCAGGTGG...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTGACTTTGGGATCAGTTaGTTTCTGGAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIADFGIS*FLELPG
Trigger: GCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTC...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGTGCCTTGATTCTGAATaGAGGCCAGGAACGGGAACT +
Preference number: 4 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSCLDSE*RPGTGT
Trigger: AGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCA...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGTGCCGGCTTCCACCGTaGCGTTCTGCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LVDFGISCFLELPGTSRLCRLPP*RSAEAV
Trigger: CACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCA...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGAGGGAGCACTCACATTaGAGATGCCACCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKREHSH*RCHRGG
Trigger: CCCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCT...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGTGCCTTGATTCTGAATaGAGGCCAGGAACGGGAACT +
Preference number: 4 (lower is better)
Translates to: AEERSASLLQPGPLWPERCLDSE*RPGTGT
Trigger: AGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCA...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTGCCGGCTTCCACCGTaGCGTTCTGCAGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKCRLPP*RSAEAV
Trigger: CACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCA...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGCCATCCACCCTGTCCTaGCCAAACGTGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKPSTLS*PNVGLS
Trigger: GCTGAGGCCCACGTTTGGCCAGGACAGGGTGGATGG...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGCTAACCCCGGGGTTCTaGCTTTGGAAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKLTPGF*LWKQLA
Trigger: GGCCAGCTGCTTCCAAAGCCAGAACCCCGGGGTTAG...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTTCTCTTTCTCTGCCCTaGTTAACTGCTAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIASLSLP*LTASGL
Trigger: AAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
3UTR CAA 72 bp CTGCCCTGGTTAACTGCTAGTGGACTTTGGGATCAGTaGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPWLTASGLWDQ*LSGASWHLQAG
Trigger: CCCAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAGCAGTTAACCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGCACTTGCTTTCTCCTaGCACGGAGAGCTCAGTACC +
Preference number: 4 (lower is better)
Translates to: LVDFGISCFLELPGTSRLALAFS*HGELST
Trigger: GGTACTGAGCTCTCCGTGGCAGGAGAAAGCAAGTGC...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGCCCAGGGCCTTTGCATaGCTCTTCTCTTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LVDFGISCFLELPGTSRLPRAFA*LFSFSA
Trigger: GGCAGAGAAAGAGAAGAGCCATGCAAAGGCCCTGGG...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGGCCTCTTGCTGCCCCTaGAACCTACAAGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: LVDFGISCFLELPGTSRLASCCP*NLQVLI
Trigger: GATCAGGACTTGTAGGTTCCAGGGGCAGCAAGAGGC...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR GCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGCAGCCCCAGGGCCTTTaGATGGCTCTTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKQPQGL*MALLFL
Trigger: GAGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTG...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKVLQRQ*QYRHAA
Trigger: AGCAGCGTGACGATACTGCCACTGCCTCTGCAGAAC...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGGCCTCTTGCTGCCCCTaGAACCTACAAGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKASCCP*NLQVLI
Trigger: GATCAGGACTTGTAGGTTCCAGGGGCAGCAAGAGGC...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CCA 90 bp TTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCTCTTTCTCTGCCCTaGTTAACTGCTAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: LLRTPSIQSRKSATRVKKSLSLP*LTASGL
Trigger: AAGTCCACTAGCAGTTAACCAGGGCAGAGAAAGAGA...CTTCTTCACCCGAGTGGCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp AGAAGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCGGTGCACACGTTGTaGGGGCGACACTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: RSQGLGHRAPGKRRPRRGPVHTL*GRHWSS
Trigger: CGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGG...CCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp AGTCAGGGCCTCGGCCACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAACACCGGTGCACACGTaGTTGGGGCGACACTGGTCC +
Preference number: 5 (lower is better)
Translates to: SQGLGHRAPGKRRPRRGPTPVHT*LGRHWS
Trigger: GGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGT...TGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGTGGCCGAGGCCCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGTGCCCCCGTCCCCATaGCAGATGCCACCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: EERSASLLQPGPLWPERGVPPSP*QMPPRR
Trigger: CCGCCGCGGTGGCATCTGCAATGGGGACGGGGGCAC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS TCA 90 bp TCCCGCCACAGGGAGCACTCACATTGCAGATGCCACCGCGGCGGGTaGGCACACCGGTGCACACGTTGTTGGGGCGACACTGGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SRHREHSHCRCHRGG*AHRCTRCWGDTGPR
Trigger: CCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCTGTGGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS CCA 90 bp CATGGATCAGGGCACCCCCGCAGAAGTGCCTGCCTTGATTCTGAATaGAGGCCAGGAACGGGAACTGGCGGGGCCTCGCCTTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: HGSGHPRRSACLDSE*RPGTGTGGASPSGR
Trigger: GCGGCCGGAAGGCGAGGCCCCGCCAGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGGGTGCCCTGATCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCCGGGGTTCTGGCTTaGGAAGCAGCTGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPGVLA*EAAGRG
Trigger: ACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCGGTGCACACGTTGTaGGGGCGACACTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGPVHTL*GRHWSS
Trigger: CGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGG...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp CAGTCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCAGGGAGCACTCACATaGCAGATGCCACCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: QSRKSATRVKKSGPRPQGQGALT*QMPPRR
Trigger: CCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCTG...GCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp ACAGGGCCCCAGGGAAAAGGAGGCCACGCCGTGGGCCAGGCCCTCGCAGACGAGCCAGCCCCAGGGCCTTaGCATGGCTCTTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TGPQGKGGHAVGQALADEPAPGP*HGSSLS
Trigger: AGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTGG...CTCGTCTGCGAGGGCCTGGCCCACGGCGTGGCCTCCTTTTCCCTGGGGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp TGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGGAAGAGCGCCCCGGGGTTCTGGCTTaGGAAGCAGCTGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: WPRSRVVENTIDPVSEERPGVLA*EAAGRG
Trigger: ACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGGG...GCGCTCTTCCGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp CCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTCCCGGGGTTCTGGCTTaGGAAGCAGCTGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: PPLAITRLSPSVTGSTMPPGVLA*EAAGRG
Trigger: ACCGCGGCCAGCTGCTTCCAAAGCCAGAACCCCGGG...AGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCGGTGCACACGTTGTaGGGGCGACACTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPVHTL*GRHWSS
Trigger: CGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCCCCGGTCCCGGGTTGTaGAGAACACCATCGATCCAG +
Preference number: 5 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPPGPGL*RTPSIQ
Trigger: CTGGATCGATGGTGTTCTCAACAACCCGGGACCGGG...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCAGGGAGCACTCACATaGCAGATGCCACCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: EERSASLLQPGPLWPERGQGALT*QMPPRR
Trigger: CCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCTG...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS CCA 90 bp CTGGCATCTGGTGCCGGCTTCCACCGTGGCGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCTGGTGAGGTTGGCCTCACGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LASGAGFHRGVLQRQ*QYRHAAGEVGLTVQ
Trigger: CTGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGATACTGCCACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCACCAGATGCCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp GGGCCTGGCTCCCACGCCACCCCAGAACTGCAGAGGCCTCTTGCTGCCCCTGGAGGGGTCACAGTCACGTaGACAAACCTGGGAAAACGG +
Preference number: 5 (lower is better)
Translates to: GPGSHATPELQRPLAAPGGVTVT*TNLGKR
Trigger: CCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCCC...TCCAGGGGCAGCAAGAGGCCTCTGCAGTTCTGGGGTGGCGTGGGAGCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGCCGGTGCACACGTTGTaGGGGCGACACTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: AEERSASLLQPGPLWPERPVHTL*GRHWSS
Trigger: CGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGG...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CAA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGGCCCCGGTCCCGGGTaGTTGAGAACACCATCGATC +
Preference number: 5 (lower is better)
Translates to: EERSASLLQPGPLWPERGGPGPG*LRTPSI
Trigger: GATCGATGGTGTTCTCAACAACCCGGGACCGGGGCC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGGCCCCGGTCCCGGGTaGTTGAGAACACCATCGATC +
Preference number: 5 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGGPGPG*LRTPSI
Trigger: GATCGATGGTGTTCTCAACAACCCGGGACCGGGGCC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp TCTCGGAAGAGCGCCACTCGGGTGAAGAAGTCAGGGCCTCGGCCACAGGGCCCCGCAGAAGTGCCTGCCTaGATTCTGAATGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SRKSATRVKKSGPRPQGPAEVPA*ILNGGQ
Trigger: CTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGC...GGGGCCCTGTGGCCGAGGCCCTGACTTCTTCACCCGAGTGGCGCTCTTCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGACACCGGTGCACACGTaGTTGGGGCGACACTGGTCC +
Preference number: 5 (lower is better)
Translates to: AEERSASLLQPGPLWPERTPVHT*LGRHWS
Trigger: GGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGT...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CAA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATACACCGGTGCACACGTaGTTGGGGCGACACTGGTCC +
Preference number: 5 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHTPVHT*LGRHWS
Trigger: GGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGT...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCCCCGGTCCCGGGTTGTaGAGAACACCATCGATCCAG +
Preference number: 5 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGPGPGL*RTPSIQ
Trigger: CTGGATCGATGGTGTTCTCAACAACCCGGGACCGGG...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp CCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTGGCCCCGGTCCCGGGTaGTTGAGAACACCATCGATC +
Preference number: 5 (lower is better)
Translates to: PPLAITRLSPSVTGSTMPGPGPG*LRTPSI
Trigger: GATCGATGGTGTTCTCAACAACCCGGGACCGGGGCC...AGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGCCCCGGTCCCGGGTaGTTGAGAACACCATCGATC +
Preference number: 5 (lower is better)
Translates to: AEERSASLLQPGPLWPERGPGPG*LRTPSI
Trigger: GATCGATGGTGTTCTCAACAACCCGGGACCGGGGCC...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS TCA 90 bp CGTTCAGGTTCTGCTGGGGGTCGTAGCCATTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGGACTGCCTCTCCCGCCGCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: RSGSAGGRSHSRSCC*WKTSGGTASPAASG
Trigger: ACCTGAGGCGGCGGGAGAGGCAGTCCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGAATGGCTACGACCCCCAGCAGAACCTGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGCCCGGTCCCGGGTTGTaGAGAACACCATCGATCCAG +
Preference number: 5 (lower is better)
Translates to: AEERSASLLQPGPLWPERPGPGL*RTPSIQ
Trigger: CTGGATCGATGGTGTTCTCAACAACCCGGGACCGGG...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CAA 90 bp CCCCTAGGCTGGCCCCGGTCCCGGGTTGTTGAGAACACCATCGATCCAGTCTCGCCAGCCCCAGGGCCTTaGCATGGCTCTTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PLGWPRSRVVENTIDPVSPAPGP*HGSSLS
Trigger: AGAAAGAGAAGAGCCATGCAAAGGCCCTGGGGCTGG...CGAGACTGGATCGATGGTGTTCTCAACAACCCGGGACCGGGGCCAGCCTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp AGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGCGCAGAAGTGCCTGCCTaGATTCTGAATGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: RRDRLLYYSQGPSGRSGGAEVPA*ILNGGQ
Trigger: CTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGC...GCCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp GAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGGGGTCACAGTCACGTaGACAAACCTGGGAAAACGG +
Preference number: 5 (lower is better)
Translates to: EERSASLLQPGPLWPERGGVTVT*TNLGKR
Trigger: CCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCCC...CCCCCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS-3UTR CAA 90 bp TGCCCCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATAACTGCAGAGGCCTCTaGCTGCCCCTGGAACCTACA +
Preference number: 5 (lower is better)
Translates to: CPSPGNHTPESLSDRLYHNCRGL*LPLEPT
Trigger: TGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTT...ATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp GCAGAGGAGAGATCGGCTTCTTTATTACAGCCAGGGCCCCTCTGGCCGGAGCGGGGGGTCACAGTCACGTaGACAAACCTGGGAAAACGG +
Preference number: 5 (lower is better)
Translates to: AEERSASLLQPGPLWPERGVTVT*TNLGKR
Trigger: CCGTTTTCCCAGGTTTGTCAACGTGACTGTGACCCC...CCGCTCCGGCCAGAGGGGCCCTGGCTGTAATAAAGAAGCCGATCTCTCCTCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000233997.4
ENST00000620695.2
CDS-3UTR CAA 90 bp GCTGGGTCCCCAACCCCCAGCACAGACGTGGCTCACAGCCGGCGTTTGATAGCTGGACTTTGGGATCAGTaGCTTTCTGGAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGSPTPSTDVAHSRRLIAGLWDQ*LSGASW
Trigger: CCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCC...AGCTATCAAACGCCGGCTGTGAGCCACGTCTGTGCTGGGGGTTGGGGACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp CCTCCCCTGGCAATCACACGCCTGAGTCCCTCAGTGACCGGCTCTACCATGCCTGGACTTTGGGATCAGTaGCTTTCTGGAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PPLAITRLSPSVTGSTMPGLWDQ*LSGASW
Trigger: CCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCC...AGGCATGGTAGAGCCGGTCACTGAGGGACTCAGGCGTGTGATTGCCAGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS-3UTR CAA 90 bp CTAGTGGACTTTGGGATCAGTTGCTTTCTGGAGCTTCCTGGCACCTCCAGGCTGAACTGCAGAGGCCTCTaGCTGCCCCTGGAACCTACA +
Preference number: 5 (lower is better)
Translates to: LVDFGISCFLELPGTSRLNCRGL*LPLEPT
Trigger: TGTAGGTTCCAGGGGCAGCAAGAGGCCTCTGCAGTT...CAGCCTGGAGGTGCCAGGAAGCTCCAGAAAGCAACTGATCCCAAAGTCCACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS CCA 72 bp TCCCTGCGGAGGCCCCAGCCTCCATCCACCCTGTCCTaGCCAAACGTGGGCCTCAGCTCTCCCGTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SLRRPQPPSTLS*PNVGLSSPVGQ
Trigger: CTGGCCCACGGGAGAGCTGAGGCCCACGTTTGGCCAGGACAGGGTGGATGGAGGCTGGGGCCTCCGCAGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS CAA 72 bp CCACCGCGGCGGGTGAGCACACCGGTGCACACGTTGTaGGGGCGACACTGGTCCTCGGGGGTCACAGTCACG +
Preference number: 6 (lower is better)
Translates to: PPRRVSTPVHTL*GRHWSSGVTVT
Trigger: CGTGACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS CAA 72 bp ATGCCACCGCGGCGGGTGAGCACACCGGTGCACACGTaGTTGGGGCGACACTGGTCCTCGGGGGTCACAGTC +
Preference number: 6 (lower is better)
Translates to: MPPRRVSTPVHT*LGRHWSSGVTV
Trigger: GACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS CCA 72 bp GGGCACCCCCGCAGAAGTGCCTGCCTTGATTCTGAATaGAGGCCAGGAACGGGAACTGGCGGGGCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: GHPRRSACLDSE*RPGTGTGGASP
Trigger: AGGCGAGGCCCCGCCAGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGGGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS CCA 72 bp GGTGCCGGCTTCCACCGTGGCGTTCTGCAGAGGCAGTaGCAGTATCGTCACGCTGCTGGTGAGGTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GAGFHRGVLQRQ*QYRHAAGEVGL
Trigger: GAGGCCAACCTCACCAGCAGCGTGACGATACTGCCACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS TCA 72 bp AGGGAGCACTCACATTGCAGATGCCACCGCGGCGGGTaGGCACACCGGTGCACACGTTGTTGGGGCGACACT +
Preference number: 6 (lower is better)
Translates to: REHSHCRCHRGG*AHRCTRCWGDT
Trigger: AGTGTCGCCCCAACAACGTGTGCACCGGTGTGCTCACCCGCCGCGGTGGCATCTGCAATGTGAGTGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS GCA 72 bp ACCTGGCATCTGGTGCCGGCTTCCACCGTGGCGTTCTaGAGAGGCAGTGGCAGTATCGTCACGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TWHLVPASTVAF*RGSGSIVTLLV
Trigger: CACCAGCAGCGTGACGATACTGCCACTGCCTCTGCAGAACGCCACGGTGGAAGCCGGCACCAGATGCCAGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS GCA 72 bp CTGCTGTGCCGCCCTCAGCCTGCACTTGCTTTCTCCTaGCACGGAGAGCTCAGTACCTCTCAGGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: LLCRPQPALAFS*HGELSTSQDPS
Trigger: GGAGGGGTCCTGAGAGGTACTGAGCTCTCCGTGGCAGGAGAAAGCAAGTGCAGGCTGAGGGCGGCACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592205.5
ENST00000633060.1
CDS TCA 72 bp TCTGCTGGGGGTCGTAGCCATTCTCGCTCATGCTGCTaGTGGAAAACGTCTGGCGGGACTGCCTCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: SAGGRSHSRSCC*WKTSGGTASPA
Trigger: GGCGGGAGAGGCAGTCCCGCCAGACGTTTTCCATCAGCAGCATGAGCGAGAATGGCTACGACCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS CAA 72 bp GGCATGGATCAGGGCACCCCCGCAGAAGTGCCTGCCTaGATTCTGAATGGAGGCCAGGAACGGGAACTGGCG +
Preference number: 6 (lower is better)
Translates to: GMDQGTPAEVPA*ILNGGQERELA
Trigger: CGCCAGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGGGTGCCCTGATCCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS GCA 72 bp AGCGGGCATGGATCAGGGCACCCCCGCAGAAGTGCCTaGCTTGATTCTGAATGGAGGCCAGGAACGGGAACT +
Preference number: 6 (lower is better)
Translates to: SGHGSGHPRRSA*LDSEWRPGTGT
Trigger: AGTTCCCGTTCCTGGCCTCCATTCAGAATCAAGGCAGGCACTTCTGCGGGGGTGCCCTGATCCATGCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1
CDS TCA 72 bp TCTGCAGAGGCAGTGGCAGTATCGTCACGCTGCTGGTaGGGTTGGCCTCACGGTCCAGCTGAAGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: SAEAVAVSSRCW*GWPHGPAEAAS
Trigger: TGATGCTGCTTCAGCTGGACCGTGAGGCCAACCTCACCAGCAGCGTGACGATACTGCCACTGCCTCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233997.4
ENST00000592205.5
ENST00000620695.2
ENST00000633060.1