RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AZIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000142920

Ensembl transcript IDs: ENST00000294517.11, ENST00000373440.6, ENST00000373441.1, ENST00000373443.7, ENST00000462920.5, ENST00000471119.5, ENST00000473089.5, ENST00000475935.5, ENST00000477570.5, ENST00000478204.5, ENST00000478635.5, ENST00000481886.5, ENST00000483027.5, ENST00000484656.5, ENST00000492420.5, ENST00000492521.1, ENST00000495135.5, ENST00000497280.1, ENST00000497710.5, ENST00000652171.1, ENST00000652381.1

Found 608 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTaGAGGAGGCAGTGCCCATGCAGCCAGGGGTCCAGGAGACCCCTG +
Preference number: 1 (lower is better)
Translates to: GGMRSHCQWVAQQGA*RRQCPCSQGSRRPL
Trigger: CAGGGGTCTCCTGGACCCCTGGCTGCATGGGCACTGCCTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp AGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGGCAGTaGCCATGCAGCCAGGGGTCCAGGAGACCCCTGCTTAGATTCGCC +
Preference number: 1 (lower is better)
Translates to: SHCQWVAQQGAWRRQ*PCSQGSRRPLLRFA
Trigger: GGCGAATCTAAGCAGGGGTCTCCTGGACCCCTGGCTGCATGGGCACTGCCTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp GCAGGACAGAGGCTTGCACACACCCTCCACGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCGCAGCGCTTCCCAGGCCACCCGGGA +
Preference number: 1 (lower is better)
Translates to: AGQRLAHTLHVILLF*SHQLPSQRFPGHPG
Trigger: TCCCGGGTGGCCTGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGGTGTGTGCAAGCCTCTGTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 90 bp TTTACAGGGCAGAAACACTGCAGGTGGAGCGCGGGGGTGGCAGGGTaGGCACCAGAGTCCTGGCCAAGGGTACCCTTGCCTGCCATCTTC +
Preference number: 1 (lower is better)
Translates to: FTGQKHCRWSAGVAG*APESWPRVPLPAIF
Trigger: GAAGATGGCAGGCAAGGGTACCCTTGGCCAGGACTCTGGTGCCCACCCTGCCACCCCCGCGCTCCACCTGCAGTGTTTCTGCCCTGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR GCA 90 bp CTTGTGACCCAGCTCGGTGCCCATTTCAAACACGAGCCGGGCGTCTaGGATGGACTGAGCATAGGCCTGAGGGTCAGGACAGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: LVTQLGAHFKHEPGV*DGLSIGLRVRTATA
Trigger: GGCAGTGGCTGTCCTGACCCTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp TCTGTGCCAGGGAAGCCACCACCAAGGTCCAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATTTCAAACACGAGCCGGGCGTCTGCG +
Preference number: 1 (lower is better)
Translates to: SVPGKPPPRSRTCIL*PSSVPISNTSRASA
Trigger: CGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGGACCTTGGTGGTGGCTTCCCTGGCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 90 bp GACCCAGCTCGGTGCCCATTTCAAACACGAGCCGGGCGTCTGCGATaGACTGAGCATAGGCCTGAGGGTCAGGACAGCCACTGCCAATGT +
Preference number: 1 (lower is better)
Translates to: DPARCPFQTRAGRLR*TEHRPEGQDSHCQC
Trigger: ACATTGGCAGTGGCTGTCCTGACCCTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp GATAGGCCAACAGGAACATCTGACTTCCAAGGCAGCCAGGAGGCATaGGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGA +
Preference number: 1 (lower is better)
Translates to: DRPTGTSDFQGSQEA*GATASGSLSRELGG
Trigger: TCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGGCTGCCTTGGAAGTCAGATGTTCCTGTTGGCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp AGCCACCACCAAGGTCCAGAACGTGCATCTTGTGACCCAGCTCGGTaGCCATTTCAAACACGAGCCGGGCGTCTGCGATGGACTGAGCAT +
Preference number: 1 (lower is better)
Translates to: SHHQGPERASCDPAR*PFQTRAGRLRWTEH
Trigger: ATGCTCAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGGACCTTGGTGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp ACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTaGCTGCCTTGCCAACCTGCAGGGAGAGCAAGGGTGCAGGGTCCA +
Preference number: 1 (lower is better)
Translates to: TAQRSKSDHQVSALL*LPCQPAGRARVQGP
Trigger: TGGACCCTGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp AGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACACGCTaGAGCCAGGGCTCAGGACTAAAGCAGAGGGTGTGGGCTCATCAG +
Preference number: 1 (lower is better)
Translates to: RDESDKVSTSGGGTR*SQGSGLKQRVWAHQ
Trigger: CTGATGAGCCCACACCCTCTGCTTTAGTCCTGAGCCCTGGCTGCAGCGTGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp CCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTaGCTTGCCAACCTGCAGGGAGAGCAAGGGTGCAGGGTCCACTCA +
Preference number: 1 (lower is better)
Translates to: PKEAKATTRCLLYSD*LANLQGEQGCRVHS
Trigger: TGAGTGGACCCTGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp GTTGGGCTGACCCAAAGGCCATTCACCAGTTATGAGCTACGTAACTaGCCATCTCAGTCCCTGACAGCAGCCCCTTCCTTATGGCACCAG +
Preference number: 1 (lower is better)
Translates to: VGLTQRPFTSYELRN*PSQSLTAAPSLWHQ
Trigger: CTGGTGCCATAAGGAAGGGGCTGCTGTCAGGGACTGAGATGGGCAGTTACGTAGCTCATAACTGGTGAATGGCCTTTGGGTCAGCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 90 bp GGACTCGTGGCAGGCACTTCAGAAAGCAAAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCAAGTC +
Preference number: 1 (lower is better)
Translates to: GLVAGTSESKSASSL*HPGQPRRRQLPRQV
Trigger: GACTTGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGCCACGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp CAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGCCATaGGATCTTCCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGG +
Preference number: 1 (lower is better)
Translates to: QKRESATPGSHCSQP*DLPRIPALFTADAW
Trigger: CCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGGAAGATCTCATGGCTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp TCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTaGTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCAAGGGT +
Preference number: 1 (lower is better)
Translates to: SNRHCPKKQKRPPGV*FTLTALPTCRESKG
Trigger: ACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp CTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTaGCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTG +
Preference number: 1 (lower is better)
Translates to: LDTAILRGQPCSNRH*PKKQKRPPGVCFTL
Trigger: CAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 90 bp GATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATGCACAGAACCATCTTGGCACTGGGG +
Preference number: 1 (lower is better)
Translates to: DFSDTPNFRLRQLRE*ESSVAMHRTILALG
Trigger: CCCCAGTGCCAAGATGGTTCTGTGCATTGCTACCGATGACTCCCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp CATGAGATGACCTCAAAGCCACGTACAGTTCCCACCAGGACTGGCTaGGATACTGAAGCAGGATGGTCAGGCTTACCTAGAGAGAAGCTC +
Preference number: 1 (lower is better)
Translates to: HEMTSKPRTVPTRTG*DTEAGWSGLPREKL
Trigger: GAGCTTCTCTCTAGGTAAGCCTGACCATCCTGCTTCAGTATCTCAGCCAGTCCTGGTGGGAACTGTACGTGGCTTTGAGGTCATCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 90 bp AAGCACCTCGTTCACTCCAAACCCATGCCACATTGCCTCATGAGATaGCCTCAAAGCCACGTACAGTTCCCACCAGGACTGGCTGAGATA +
Preference number: 1 (lower is better)
Translates to: KHLVHSKPMPHCLMR*PQSHVQFPPGLAEI
Trigger: TATCTCAGCCAGTCCTGGTGGGAACTGTACGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTGGAGTGAACGAGGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 90 bp AAAGATGTCCACGCCACAGCCCTCTGGGAAGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAATCTCTTCAAATCTCACTTTGGCCCC +
Preference number: 1 (lower is better)
Translates to: KDVHATALWEVQVQG*VDHGSNLFKSHFGP
Trigger: GGGGCCAAAGTGAGATTTGAAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTGGACATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 90 bp TTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCTTGTTGGCACAGCTAAAGCCC +
Preference number: 1 (lower is better)
Translates to: LQGLAQMILLAGIPI*WTNSISALLAQLKP
Trigger: GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 90 bp CATGACAGCCACTGTCATTTCAAAAGCCACAGAATGCCCCCTCAGTaGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTG +
Preference number: 1 (lower is better)
Translates to: HDSHCHFKSHRMPPQ*TCSEEGISYTWVSL
Trigger: CAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGAAATGACAGTGGCTGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp CAGATAACCCAGGAAGATCATTCTAGAGAGGGGACAGTAAATGCATaGCCAGCAGTGGAGTGTTTGAAGAACAGAGGGGAGGCCAGTGTG +
Preference number: 1 (lower is better)
Translates to: QITQEDHSREGTVNA*PAVECLKNRGEASV
Trigger: CACACTGGCCTCCCCTCTGTTCTTCAAACACTCCACTGCTGGGCATGCATTTACTGTCCCCTCTCTAGAATGATCTTCCTGGGTTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp CCACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTaGAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: PPPPHGASSHFQAGV*RISVTLQTLGSGSS
Trigger: TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 90 bp TCAAACAGGACTGAGTTGAAGATCCCATACACGCCCTCATCAAGGTaGTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: SNRTELKIPYTPSSR*YTMVLEVEPFSSSL
Trigger: CAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 90 bp CATCCAAACTCCATGACAGCCACTGTCATTTCAAAAGCCACAGAATaGCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCT +
Preference number: 1 (lower is better)
Translates to: HPNSMTATVISKATE*PLSGLAQKRESATP
Trigger: AGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGAAATGACAGTGGCTGTCATGGAGTTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 90 bp AGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTCCA +
Preference number: 1 (lower is better)
Translates to: SSWIPCLAAYLICAI*LQGLAQMILLAGIP
Trigger: TGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 90 bp AAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTaGAATTTGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGG +
Preference number: 1 (lower is better)
Translates to: KAQQLDPMLGSIFDL*NLLTGVGADDLTGR
Trigger: CCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 90 bp TTTGCCAGCTCCATCTCATTGTCAAAGCTCAGCAGCTGGATCCCATaGTTGGCAGCATATTTGATCTGTGCAATTTGCTTACAGGGGTTG +
Preference number: 1 (lower is better)
Translates to: FASSISLSKLSSWIP*LAAYLICAICLQGL
Trigger: CAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGATGGAGCTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 90 bp CGAAGAAGGCAGCTACCTCGTCAAGTCCATTCAGCAGATGTTAGATaGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: RRRQLPRQVHSADVR*QFLQGAMQGHGERK
Trigger: TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATCTGCTGAATGGACTTGACGAGGTAGCTGCCTTCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 90 bp CCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATaGGTGCTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATA +
Preference number: 1 (lower is better)
Translates to: PGSSRKPMSLSAKEV*VLGDLRWKKSQSLI
Trigger: TATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAGCACTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 90 bp AGGAGGCAGACACAGCTGGAAGGAACAGGATTTATGTTGCATACTTaGACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAA +
Preference number: 1 (lower is better)
Translates to: RRQTQLEGTGFMLHT*TTASVRLVLFTGQK
Trigger: TTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAAGTATGCAACATAAATCCTGTTCCTTCCAGCTGTGTCTGCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR TCA 90 bp GTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGTaGCTGCTAATGGGTATGGGATTTCTTTCTAGGGTGATGGTTACA +
Preference number: 1 (lower is better)
Translates to: VDLCHQGLGNGKNGE*LLMGMGFLSRVMVT
Trigger: TGTAACCATCACCCTAGAAAGAAATCCCATACCCATTAGCAGTCACTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 90 bp CAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGTGCTTaGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTA +
Preference number: 1 (lower is better)
Translates to: QQKTYVPLRKRSMSA*RSEMEEVSESDRQL
Trigger: TAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAGCACTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 90 bp ACATCCTTGCTGCAAATGGAACATGAAACACTAGAAAGGCTCCAGTaGGAAATCCATCCAAACTCCATGACAGCCACTGTCATTTCAAAA +
Preference number: 1 (lower is better)
Translates to: TSLLQMEHETLERLQ*EIHPNSMTATVISK
Trigger: TTTTGAAATGACAGTGGCTGTCATGGAGTTTGGATGGATTTCTCACTGGAGCCTTTCTAGTGTTTCATGTTCCATTTGCAGCAAGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGGAACACCCCCACACCTaGCTGACCAGGCCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEEHPHT*LTRPLA
Trigger: TGCAAGGGGCCTGGTCAGCCAGGTGTGGGGGTGTTC...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCACCAGGCCCCTTGCACTaGAGAGGAGGCAGACACAGC +
Preference number: 2 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPPGPLH*RGGRHS
Trigger: GCTGTGTCTGCCTCCTCTGCAGTGCAAGGGGCCTGG...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTGCGGGGGTGGCAGGGTaGGCACCAGAGTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGAGVAG*APESWP
Trigger: TGGCCAGGACTCTGGTGCCCACCCTGCCACCCCCGC...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGCCCCGGGGCATAATTTaGGAACCCGGCAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEPRGII*EPGSVK
Trigger: CTTCACACTGCCGGGTTCCCAAATTATGCCCCGGGG...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCGGCCAAGGGTACCCTTaGCTGCCATCTTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: RHWTQQYSVASPVLTGTAGQGYP*LPSSPP
Trigger: AGGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCC...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGCAGCCACTGCCAATGTaGAAACTCACACCCACCACC +
Preference number: 2 (lower is better)
Translates to: GHVVAPQLSKDVHATALWQPLPM*KLTPTT
Trigger: GGTGGTGGGTGTGAGTTTTCACATTGGCAGTGGCTG...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGAGAATGCCCCCTCAGTaGACTTGCTCAGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEERMPPQ*TCSEEG
Trigger: TCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCT...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGTGTGTCATCAGGGACTaGGGAATGGGAAAAATGGAG +
Preference number: 2 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRCVIRD*GMGKME
Trigger: CTCCATTTTTCCCATTCCCCAGTCCCTGATGACACA...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCCTGCTTTACTCTGACTaGCTTGCCAACCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: RHWTQQYSVASPVLTGTALLYSD*LANLQG
Trigger: TCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAG...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp CATTCTAGAGAGGGGACAGTAAATGCATGCCCAGCAGTGGAGTGTTaGAAGAACAGAGGGGAGGCCAGTGTGGCCAGGACCCAGTGCGTG +
Preference number: 2 (lower is better)
Translates to: HSREGTVNACPAVEC*KNRGEASVARTQCV
Trigger: CACGCACTGGGTCCTGGCCACACTGGCCTCCCCTCTGTTCTTCAAACACTCCACTGCTGGGCATGCATTTACTGTCCCCTCTCTAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 2 (lower is better)
Translates to: SGLAQKRESATPGSHCSQSQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 2 (lower is better)
Translates to: SECKTGPIYRAETLQVERSQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR GCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACAGCTGACCAGGCCCCTTaGACTGCAGAGGAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: HEEERDESDKVSTSGGGTADQAP*TAEEAD
Trigger: GTCTGCCTCCTCTGCAGTGCAAGGGGCCTGGTCAGC...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCT +
Preference number: 2 (lower is better)
Translates to: GHVVAPQLSKDVHATALWAGIPI*WTNSIS
Trigger: AGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGC...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR GCA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGTTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GHVVAPQLSKDVHATALWLICAI*LQGLAQ
Trigger: CTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCTGGGCACCAGAGTCCTaGCCAAGGGTACCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCWAPES*PRVPLP
Trigger: AGGCAAGGGTACCCTTGGCCAGGACTCTGGTGCCCA...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGCGGGGGTGGCAGGGTaGGCACCAGAGTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LNYSECKTGPIYRAETLQAGVAG*APESWP
Trigger: TGGCCAGGACTCTGGTGCCCACCCTGCCACCCCCGC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR CCA 90 bp TCAAAGACCAGCCAGTCCCCTACGTGTAGTTGCGGCAGCCACAGGCCCTCAGCCGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: SKTSQSPTCSCGSHRPSAGTRWS*RWNHFP
Trigger: AGGAAAATGGTTCCACCTCCAAGACCATCGTGTACC...GGCTGAGGGCCTGTGGCTGCCGCAACTACACGTAGGGGACTGGCTGGTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCATCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 2 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSSQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGAGCTGGGTGTTGGGCTaGCCCAAAGGCCATTCACCA +
Preference number: 2 (lower is better)
Translates to: SGLAQKRESATPGSHCSQSWVLG*PKGHSP
Trigger: TGGTGAATGGCCTTTGGGTCAGCCCAACACCCAGCT...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp CCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAATGAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATT +
Preference number: 2 (lower is better)
Translates to: PFSSSLPGWSSRTSFLAMRTCIL*PSSVPI
Trigger: AATGGGCACCGAGCTGGGTCACAAGATGCACGTTCT...CATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR GCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAGTGATGGGGAAATCCTaGCCCAGGCCTAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTVMGKS*PRPSPG
Trigger: GCCTGGGCTAGGCCTGGGGCAGGATTTCCCCATCAC...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp AAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCTaGCCAACCTGCAGGGAGAGCAAGGGTGCAGGGTCCACTCAAAAC +
Preference number: 2 (lower is better)
Translates to: KKQKRPPGVCFTLTA*PTCRESKGAGSTQN
Trigger: GTTTTGAGTGGACCCTGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp TTGAAGATCCCATACACGCCCTCATCAAGGTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGC +
Preference number: 2 (lower is better)
Translates to: LKIPYTPSSRWYTMV*EVEPFSSSLPGWSS
Trigger: GCTAGACCAGCCTGGCAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGATGAGTCAGATAAGGTaGGTACTAGTGGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQMSQIR*VLVGEA
Trigger: TGCCTCCCCCACTAGTACTCACCTTATCTGACTCAT...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTGTGTCTGCTTTACTCTaGCTGCCTTGCCAACCTGCA +
Preference number: 2 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGVSALL*LPCQPA
Trigger: TGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACAC...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATACTGCCTTGCCAACCTaGAGGGAGAGCAAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: PRIPALFTADAWFQQKTYTALPT*RESKGA
Trigger: TGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGT...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCGACCACCAGGTGTCTaGTTTACTCTGACTGCCTTG +
Preference number: 2 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGRPPGV*FTLTAL
Trigger: CAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp CGCCCTCATCAAGGTGGTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCCTAAAGGGCCGGACTCGTaGCAGGCACTTCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RPHQGGTRWSWRWNHFPPKGPDS*QALQKA
Trigger: TGCTTTCTGAAGTGCCTGCCACGAGTCCGGCCCTTT...AGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 90 bp CCTGGCTTTGAGAAAGCACCTCGTTCACTCCAAACCCATGCCACATaGCCTCATGAGATGACCTCAAAGCCACGTACAGTTCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: PGFEKAPRSLQTHAT*PHEMTSKPRTVPTR
Trigger: CCTGGTGGGAACTGTACGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTGGAGTGAACGAGGTGCTTTCTCAAAGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp CAGCCACTGTCATTTCAAAAGCCACAGAATGCCCCCTCAGTGGACTaGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCC +
Preference number: 2 (lower is better)
Translates to: QPLSFQKPQNAPSVD*LRRGNQLHLGLTVA
Trigger: GGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGAAATGACAGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGGGCTCATCAGTGAGTaGTGGGGAAATCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAEGLISE*WGNPAP
Trigger: TGGGGCAGGATTTCCCCATCACTCACTGATGAGCCC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGGCAACCTCGGCTCACTaGGACCTCCACCTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: RCLVPAENLCPSPQKKYEATSAH*DLHLPV
Trigger: AACAGGGAGGTGGAGGTCGCAGTGAGCCGAGGTTGC...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACATTATGGCACCAGGCCTaGAGGCCCATGAGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTLWHQA*RPMRRR
Trigger: TCTCCTCCTCATGGGCCTCCAGGCCTGGTGCCATAA...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp CCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAATGCCCACCACCTCCACATaGTGCTTCTTCGCATTTTCA +
Preference number: 2 (lower is better)
Translates to: PFSSSLPGWSSRTSFLAMPTTST*CFFAFS
Trigger: TGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGGG...CATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 90 bp CAATGCACAGAACCATCTTGGCACTGGGGTGGCTCTTTACCACCTTaGCCAGCTCCATCTCATTGTCAAAGCTCAGCAGCTGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: QCTEPSWHWGGSLPP*PAPSHCQSSAAGSH
Trigger: ATGGGATCCAGCTGCTGAGCTTTGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGTGTGGGCTCATCAGTaGGTGATGGGGAAATCCTGC +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAEVWAHQ*VMGKSC
Trigger: GCAGGATTTCCCCATCACTCACTGATGAGCCCACAC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR TCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACATGCCACATTGCCTCATaGGATGACCTCAAAGCCACG +
Preference number: 2 (lower is better)
Translates to: KATECPLSGLAQKRESATCHIAS*DDLKAT
Trigger: CGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCA...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGGCCAAGGGTACCCTTaGCTGCCATCTTCCCCACCT +
Preference number: 2 (lower is better)
Translates to: LNYSECKTGPIYRAETLQGQGYP*LPSSPP
Trigger: AGGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGAACAGGATTTATGTTaGATACTTGAACTACAGCGA +
Preference number: 2 (lower is better)
Translates to: GRRPKETPRTPPHLADQAEQDLC*ILELQR
Trigger: TCGCTGTAGTTCAAGTATGCAACATAAATCCTGTTC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR GCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATTGTCCTGATAAGCACTaGCAGTCTCAGGGGATGCCA +
Preference number: 2 (lower is better)
Translates to: PRIPALFTADAWFQQKTYCPDKH*QSQGMP
Trigger: TGGCATCCCCTGAGACTGGCAGTGCTTATCAGGACA...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp ACTGAGCATAGGCCTGAGGGTCAGGACAGCCACTGCCAATGTGAAAACTCACACGCAGTTTCTACAAGGTaGAATGCAGGGGCATGGAGA +
Preference number: 2 (lower is better)
Translates to: TEHRPEGQDSHCQCENSHAVSTR*NAGAWR
Trigger: TCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGC...GTGTGAGTTTTCACATTGGCAGTGGCTGTCCTGACCCTCAGGCCTATGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTGGGCACCAGAGTCCTaGCCAAGGGTACCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: LNYSECKTGPIYRAETLQWAPES*PRVPLP
Trigger: AGGCAAGGGTACCCTTGGCCAGGACTCTGGTGCCCA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR CCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGCTGATAGACAATTACTaGCATGGTAATACCTGTAAA +
Preference number: 2 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEELIDNY*HGNTCK
Trigger: TTTACAGGTATTACCATGCCAGTAATTGTCTATCAG...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp ATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACAGCTAAAGCCCAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGA +
Preference number: 2 (lower is better)
Translates to: IPICWTNSISALLAQLKPSASSL*HPGQPR
Trigger: TCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACT...GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 90 bp CAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAATTaGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTCC +
Preference number: 2 (lower is better)
Translates to: QQLDPMLGSIFDLCN*LTGVGADDLTGRDS
Trigger: GGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 90 bp GGTGAGTGGTTCTTAGACTTCTGCAGGATGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTGAAGATCCCATACACGCCCTCATCA +
Preference number: 2 (lower is better)
Translates to: GEWFLDFCRMGVGQM*SNRTELKIPYTPSS
Trigger: TGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGTCTAAGAACCACTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAGCCCAGGCTGCTTTGTaGATCAAACTGCCAGATTCC +
Preference number: 2 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTAQAAL*IKLPDS
Trigger: GGAATCTGGCAGTTTGATTCACAAAGCAGCCTGGGC...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAAGGCCTAGCCCAGGCTaGTTTGTGAATCAAACTGCC +
Preference number: 2 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTRPSPG*FVNQTA
Trigger: GGCAGTTTGATTCACAAAGCAGCCTGGGCTAGGCCT...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTGACCAACTCCATCTCTaGCTTGTTGGCACAGCTAAA +
Preference number: 2 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCDQLHL*LVGTAK
Trigger: TTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTC...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGGATACTGAAGCAGGATaGTCAGGCTTACCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: SGLAQKRESATPGSHCSQDTEAG*SGLPRE
Trigger: CTCTCTAGGTAAGCCTGACCATCCTGCTTCAGTATC...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCATGCACAGAACCATCTTaGCACTGGGGTGGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSCTEPS*HWGGSL
Trigger: TAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCA...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR GCA 90 bp CCACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTAGCAGCTGGATCCCATaGTTGGCAGCATATTTGATC +
Preference number: 2 (lower is better)
Translates to: PPPPHGASSHFQAGVCRISSWIP*LAAYLI
Trigger: GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCT...AATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGAAACTAGATCCCACCTaGAAAAGGGAGACACCCCTG +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAEKLDPT*KRETPL
Trigger: CAGGGGTGTCTCCCTTTTCCAGGTGGGATCTAGTTT...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAAACCTTCAGCACACCTaGGCTGCTGTTGCACTTGAC +
Preference number: 2 (lower is better)
Translates to: LSKLSSWIPCLAAYLICANLQHT*AAVALD
Trigger: GTCAAGTGCAACAGCAGCCCAGGTGTGCTGAAGGTT...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 90 bp CCATGCTTGGCAGCATATTTGATCTGTGCAATTTGCTTACAGGGGTaGGCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTGGACC +
Preference number: 2 (lower is better)
Translates to: PCLAAYLICAICLQG*AQMILLAGIPICWT
Trigger: GGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGGGAACCCGGCAGTGTaGAGGAGCCTTTGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHGNPAV*RSLCPD
Trigger: ATCAGGACAAAGGCTCCTTCACACTGCCGGGTTCCC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGTATGAGCTACGTAACTaGCCATCTCAGTCCCTGACA +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAEYELRN*PSQSLT
Trigger: TGTCAGGGACTGAGATGGGCAGTTACGTAGCTCATA...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCATTCTACAAGGTGCAATaGAGGGGCATGGAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSFYKVQ*RGMEKE
Trigger: TTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAA...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR GCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCATTCAGAAAGCAAAAGTaGTTCCTCACTATGGCACCC +
Preference number: 2 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSFRKQK*FLTMAP
Trigger: GGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAA...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACATTCACAGCAGATGCCTaGTTCCAGCAGAAAACCTAT +
Preference number: 2 (lower is better)
Translates to: KATECPLSGLAQKRESATFTADA*FQQKTY
Trigger: ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAA...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAGGGATTCCAATATGCTaGACCAACTCCATCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LSKLSSWIPCLAAYLICAGIPIC*TNSISA
Trigger: GGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCC...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR TCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTTTTATGTTGCATACTTaGACTACAGCGAGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGFMLHT*TTASVR
Trigger: TCTTACACTCGCTGTAGTTCAAGTATGCAACATAAA...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGTGTTCTAACAGGCACTaGCCAAAGAAGCAAAAGCGA +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAECSNRH*PKKQKR
Trigger: TCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACA...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGAAATCTGAACTCCTTTaGTCAACAGCTCACACACCC +
Preference number: 2 (lower is better)
Translates to: NFILGETESQEVRHLAAEKSELL*STAHTP
Trigger: GGGTGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTT...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp GAGGAGGCAGACACAGCTGGAAGGAACAGGATTTATGTTGCATACTaGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: EEADTAGRNRIYVAY*NYSECKTGPIYRAE
Trigger: TTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAAGTATGCAACATAAATCCTGTTCCTTCCAGCTGTGTCTGCCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR-3UTR TCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGACTGGCTGAGATACTaGAGCAGGATGGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHDWLRY*SRMVRL
Trigger: AAGCCTGACCATCCTGCTTCAGTATCTCAGCCAGTC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTTATATTTACAAAGGTaGGAAGGAGACCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: SGLAQKRESATPGSHCSQLYLQR*EGDQRR
Trigger: TCTCCTTTGGTCTCCTTCCCACCTTTGTAAATATAA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGAACAGGATTTATGTTaGATACTTGAACTACAGCGA +
Preference number: 2 (lower is better)
Translates to: KATECPLSGLAQKRESATEQDLC*ILELQR
Trigger: TCGCTGTAGTTCAAGTATGCAACATAAATCCTGTTC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR GCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATCTTTGTGAATCAAACTaGCAGATTCCGCTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHLCESN*QIPLQF
Trigger: AAACTGCAGCGGAATCTGGCAGTTTGATTCACAAAG...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp CAGATTCAGACATGTTTATTCATTTGCCCATCCAGCATATACTTTTaGAACACCTACTCCGTTCTAGGTAATAAGGACACAGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: QIQTCLFICPSSIYF*NTYSVLGNKDTAVK
Trigger: TTTCACTGCTGTGTCCTTATTACCTAGAACGGAGTAGGTGTTCAAAAAGTATATGCTGGATGGGCAAATGAATAAACATGTCTGAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 90 bp GTTAAGAGCATGTTTATTCAGACAGATTCAGACATGTTTATTCATTaGCCCATCCAGCATATACTTTTTGAACACCTACTCCGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: VKSMFIQTDSDMFIH*PIQHILFEHLLRSR
Trigger: CCTAGAACGGAGTAGGTGTTCAAAAAGTATATGCTGGATGGGCAAATGAATAAACATGTCTGAATCTGTCTGAATAAACATGCTCTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp CGCAATCACAGCCATCAACCGCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCTCCGTGGATGGTTTCA +
Preference number: 3 (lower is better)
Translates to: RNHSHQPPGPTG*CCTGAAPWMVS
Trigger: TGAAACCATCCACGGAGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGGCGGTTGATGGCTGTGATTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTGGCCAAGGGTACCCTaGCCTGCCATCTTCCCCACC +
Preference number: 3 (lower is better)
Translates to: GRRPKETPRTPPHLADQAWPRVP*PAIFPT
Trigger: GGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCCA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
3UTR GCA 72 bp AGGCTTGCACACACCCTCCACGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCGCAGCGCTTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: RLAHTLHVILLF*SHQLPSQRFPG
Trigger: GCCTGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGGTGTGTGCAAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp GGGAAGCCACCACCAAGGTCCAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATTTCAAACACGAGCCGG +
Preference number: 3 (lower is better)
Translates to: GKPPPRSRTCIL*PSSVPISNTSR
Trigger: CCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGGACCTTGGTGGTGGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp CAAGGTCCAGAACGTGCATCTTGTGACCCAGCTCGGTaGCCATTTCAAACACGAGCCGGGCGTCTGCGATGG +
Preference number: 3 (lower is better)
Translates to: QGPERASCDPAR*PFQTRAGRLRW
Trigger: CCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CAA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGATGCACAGAACCATCTaGGCACTGGGGTGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: GHVVAPQLSKDVHATALWMHRTI*ALGWLF
Trigger: AAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCAT...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CAA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTGGCCAAGGGTACCCTaGCCTGCCATCTTCCCCACC +
Preference number: 3 (lower is better)
Translates to: SGLAQKRESATPGSHCSQWPRVP*PAIFPT
Trigger: GGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCCA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CAA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGAGGTCCAAGGCTGAGTaGATCACGGAAGCAATCTCT +
Preference number: 3 (lower is better)
Translates to: GHVVAPQLSKDVHATALWRSKAE*ITEAIS
Trigger: AGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCT...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp TCAGATAAGGTGAGTACTAGTGGGGGAGGCACACGCTaGAGCCAGGGCTCAGGACTAAAGCAGAGGGTGTGG +
Preference number: 3 (lower is better)
Translates to: SDKVSTSGGGTR*SQGSGLKQRVW
Trigger: CCACACCCTCTGCTTTAGTCCTGAGCCCTGGCTGCAGCGTGTGCCTCCCCCACTAGTACTCACCTTATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp GCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTaGCTTGCCAACCTGCAGGGAGAGCAAGGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: AKATTRCLLYSD*LANLQGEQGCR
Trigger: CCTGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CAA 90 bp CACAGTGAAGGCCGAGGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACTCTTCAAATCTCACTTaGGCCCCTTCTGTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: HSEGRGHVVAPQLSKDVHSSNLT*APSVPG
Trigger: CCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGA...GTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACCTCGGCCTTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp CCAGTTATGAGCTACGTAACTGCCCATCTCAGTCCCTaGCAGCAGCCCCTTCCTTATGGCACCAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PVMSYVTAHLSP*QQPLPYGTRPG
Trigger: TCCAGGCCTGGTGCCATAAGGAAGGGGCTGCTGTCAGGGACTGAGATGGGCAGTTACGTAGCTCATAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp GCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTaGCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: AILRGQPCSNRH*PKKQKRPPGVC
Trigger: GCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp CGCCCTCATCAAGGTGGTACACGATGGTCTTGGAGGTaGAACCATTTTCCTCCTCCCTGCCAGGCTGGTCTA +
Preference number: 3 (lower is better)
Translates to: RPHQGGTRWSWR*NHFPPPCQAGL
Trigger: TAGACCAGCCTGGCAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp AGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTaGCTGCCTTGCCAACCTGCAGGGAGAGCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: RSKSDHQVSALL*LPCQPAGRARV
Trigger: CACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp CACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTaGTTTACTCTGACTGCCTTGCCAACCTGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: HCPKKQKRPPGV*FTLTALPTCRE
Trigger: CTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp CATACACGCCCTCATCAAGGTGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCTCCTCCCTGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: HTRPHQGGTRWS*RWNHFPPPCQA
Trigger: AGCCTGGCAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CAA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGATTTATGTTGCATACTaGAACTACAGCGAGTGTAAG +
Preference number: 3 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRIYVAY*NYSECK
Trigger: CTTACACTCGCTGTAGTTCAAGTATGCAACATAAAT...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CAA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTGTGTTAAATACTCCATaGCCCCTACTCTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGVLNTP*PLLWAR
Trigger: CCTGGCCCAGAGTAGGGGCAATGGAGTATTTAACAC...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CAA 90 bp CCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAATGAACTCCATCTCTGCCTaGTTGGCACAGCTAAAGCCC +
Preference number: 3 (lower is better)
Translates to: PFSSSLPGWSSRTSFLAMNSISA*LAQLKP
Trigger: GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTT...CATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp GCAGGCACTTCAGAAAGCAAAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCT +
Preference number: 3 (lower is better)
Translates to: AGTSESKSASSL*HPGQPRRRQLP
Trigger: AGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp TTGGAGGTGGAACCATTTTCCTCCTCCCTGCCAGGCTaGTCTAGCAGAACCTCCTTCTTGGCAATGATGCTG +
Preference number: 3 (lower is better)
Translates to: LEVEPFSSSLPG*SSRTSFLAMML
Trigger: CAGCATCATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGGTTCCACCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp AGATCCCATACACGCCCTCATCAAGGTGGTACACGATaGTCTTGGAGGTGGAACCATTTTCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: RSHTRPHQGGTR*SWRWNHFPPPC
Trigger: GCAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp ACCTCAAAGCCACGTACAGTTCCCACCAGGACTGGCTaGGATACTGAAGCAGGATGGTCAGGCTTACCTAGA +
Preference number: 3 (lower is better)
Translates to: TSKPRTVPTRTG*DTEAGWSGLPR
Trigger: TCTAGGTAAGCCTGACCATCCTGCTTCAGTATCTCAGCCAGTCCTGGTGGGAACTGTACGTGGCTTTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp GTTCACTCCAAACCCATGCCACATTGCCTCATGAGATaGCCTCAAAGCCACGTACAGTTCCCACCAGGACTG +
Preference number: 3 (lower is better)
Translates to: VHSKPMPHCLMR*PQSHVQFPPGL
Trigger: CAGTCCTGGTGGGAACTGTACGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTGGAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp ACCTCGTTCACTCCAAACCCATGCCACATTGCCTCATaGGATGACCTCAAAGCCACGTACAGTTCCCACCAG +
Preference number: 3 (lower is better)
Translates to: TSFTPNPCHIAS*DDLKATYSSHQ
Trigger: CTGGTGGGAACTGTACGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTGGAGTGAACGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp GAATCAGCTACACCTGGGTCTCACTGTAGCCAGCCATaGGATCTTCCCAGGATTCCTGCGCTTTTCACAGCA +
Preference number: 3 (lower is better)
Translates to: ESATPGSHCSQP*DLPRIPALFTA
Trigger: TGCTGTGAAAAGCGCAGGAATCCTGGGAAGATCTCATGGCTGGCTACAGTGAGACCCAGGTGTAGCTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp CACGCCACAGCCCTCTGGGAAGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAATCTCTTCAAATCTCAC +
Preference number: 3 (lower is better)
Translates to: HATALWEVQVQG*VDHGSNLFKSH
Trigger: GTGAGATTTGAAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp AGATCTTCCCAGGATTCCTGCGCTTTTCACAGCAGATaGCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCG +
Preference number: 3 (lower is better)
Translates to: RSSQDSCAFHSR*LVPAENLCPSP
Trigger: CGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGGAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp AAGCAATCTCTTCAAATCTCACTTTGGCCCCTTCTGTaGCAGGGAAGCCACCACCAAGGTCCAGAACGTGCA +
Preference number: 3 (lower is better)
Translates to: KQSLQISLWPLL*QGSHHQGPERA
Trigger: TGCACGTTCTGGACCTTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGAGATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR-3UTR CAA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGCAAACCCATGCCACATaGCCTCATGAGATGACCTCA +
Preference number: 3 (lower is better)
Translates to: SGLAQKRESATPGSHCSQQTHAT*PHEMTS
Trigger: TGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTG...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR-3UTR CAA 90 bp CACAGTGAAGGCCGAGGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACTGCTTGGCAGCATATTaGATCTGTGCAATTTGCTTA +
Preference number: 3 (lower is better)
Translates to: HSEGRGHVVAPQLSKDVHCLAAY*ICAICL
Trigger: TAAGCAAATTGCACAGATCAAATATGCTGCCAAGCA...GTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACCTCGGCCTTCACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp GGAAATCCTGCCCCAGGCCTAGCCCAGGCTGCTTTGTaGATCAAACTGCCAGATTCCGCTGCAGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: GNPAPGLAQAAL*IKLPDSAAVFK
Trigger: TTTAAAAACTGCAGCGGAATCTGGCAGTTTGATTCACAAAGCAGCCTGGGCTAGGCCTGGGGCAGGATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR GCA 72 bp TTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCTTGTTGGCACAG +
Preference number: 3 (lower is better)
Translates to: LAQMILLAGIPI*WTNSISALLAQ
Trigger: CTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp CACTGTCATTTCAAAAGCCACAGAATGCCCCCTCAGTaGACTTGCTCAGAAGAGGGAATCAGCTACACCTGG +
Preference number: 3 (lower is better)
Translates to: HCHFKSHRMPPQ*TCSEEGISYTW
Trigger: CCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGAAATGACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp GCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTaGACCAACTCCATCTCTGCCTTGTTGGCACAGCTA +
Preference number: 3 (lower is better)
Translates to: AQMILLAGIPIC*TNSISALLAQL
Trigger: TAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR TCA 72 bp CACAGCCCTCTGGGAAGTACAGGTCCAAGGCTGAGTTaGTCACGGAAGCAATCTCTTCAAATCTCACTTTGG +
Preference number: 3 (lower is better)
Translates to: HSPLGSTGPRLS*SRKQSLQISLW
Trigger: CCAAAGTGAGATTTGAAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp CAGGAAGATCATTCTAGAGAGGGGACAGTAAATGCATaGCCAGCAGTGGAGTGTTTGAAGAACAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: QEDHSREGTVNA*PAVECLKNRGE
Trigger: CTCCCCTCTGTTCTTCAAACACTCCACTGCTGGGCATGCATTTACTGTCCCCTCTCTAGAATGATCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp CAGCTACCTCGTCAAGTCCATTCAGCAGATGTTAGATaGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGA +
Preference number: 3 (lower is better)
Translates to: QLPRQVHSADVR*QFLQGAMQGHG
Trigger: TCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATCTGCTGAATGGACTTGACGAGGTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp ACTGAGTTGAAGATCCCATACACGCCCTCATCAAGGTaGTACACGATGGTCTTGGAGGTGGAACCATTTTCC +
Preference number: 3 (lower is better)
Translates to: TELKIPYTPSSR*YTMVLEVEPFS
Trigger: GGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTTCAACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp ATCCCATGCTTGGCAGCATATTTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAGATGATCTTACTGGCA +
Preference number: 3 (lower is better)
Translates to: IPCLAAYLICAI*LQGLAQMILLA
Trigger: TGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR GCA 72 bp CCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTaGAGGATTTCAGTGACACTCCAAACTTTAGGCTCA +
Preference number: 3 (lower is better)
Translates to: PHGASSHFQAGV*RISVTLQTLGS
Trigger: TGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CCA 72 bp CAGGGTCCACTCAAAACCTCCCACACACCCATTTCTTaGCTCTGTATCTTCAGTATGAATTTCCACAGCTGT +
Preference number: 3 (lower is better)
Translates to: QGPLKTSHTPIS*LCIFSMNFHSC
Trigger: ACAGCTGTGGAAATTCATACTGAAGATACAGAGCCAAGAAATGGGTGTGTGGGAGGTTTTGAGTGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp CTGCAAATGGAACATGAAACACTAGAAAGGCTCCAGTaGGAAATCCATCCAAACTCCATGACAGCCACTGTC +
Preference number: 3 (lower is better)
Translates to: LQMEHETLERLQ*EIHPNSMTATV
Trigger: GACAGTGGCTGTCATGGAGTTTGGATGGATTTCTCACTGGAGCCTTTCTAGTGTTTCATGTTCCATTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp ACCTATGTCCCTCTCCGCAAAAGAAGTATGAGTGCTTaGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGAT +
Preference number: 3 (lower is better)
Translates to: TYVPLRKRSMSA*RSEMEEVSESD
Trigger: ATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAGCACTCATACTTCTTTTGCGGAGAGGGACATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CCA 72 bp AGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATaGAGAGTGACTGCTAATGGGTATGGGATTTCTTTC +
Preference number: 3 (lower is better)
Translates to: RFVSSGTGEWEK*RVTANGYGISF
Trigger: GAAAGAAATCCCATACCCATTAGCAGTCACTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR TCA 72 bp ATGGGATTTCTTTCTAGGGTGATGGTTACACAACTCTaGATACACCAGAAACCACTAACTTCTCCACTTTAT +
Preference number: 3 (lower is better)
Translates to: MGFLSRVMVTQL*IHQKPLTSPLY
Trigger: ATAAAGTGGAGAAGTTAGTGGTTTCTGGTGTATTCAGAGTTGTGTAACCATCACCCTAGAAAGAAATCCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGGCTGGATGGAGCCGCTaGTGCAGCCGCCGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRAGWSR*CSRRLR
Trigger: TCTAAGGCGGCGGCTGCAGCAGCGGCTCCATCCAGC...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGACGCCACGCGGTGGGTaGGGGCCGCAAGCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEETPRGG*GPQAPN
Trigger: GTTTGGAGCTTGCGGCCCCCACCCACCGCGTGGCGT...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAPGPTG*CCTGAA
Trigger: AGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGTCCGTGGTGGCCTGTaGGGCCCCCAGAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAVRGGL*GPQSEF
Trigger: GAACTCACTCTGGGGGCCTCACAGGCCACCACGGAC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGCACGAGCCGGGCGTCTaGGATGGACTGAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEHEPGV*DGLSIG
Trigger: GCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTG...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RHWTQQYSVASPVLTGTAPGPTG*CCTGAA
Trigger: AGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGG...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCACTACCTCGTCCGTGGTaGCCTGTGAGGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPLPRPW*PVRPPE
Trigger: CTCTGGGGGCCTCACAGGCCACCACGGACGAGGTAG...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCCAGGCCCCTTGCACTaGAGAGGAGGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAPGPLH*RGGRHS
Trigger: GCTGTGTCTGCCTCCTCTGCAGTGCAAGGGGCCTGG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCAGAACACCCCCACACCTaGCTGACCAGGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPEHPHT*LTRPLA
Trigger: TGCAAGGGGCCTGGTCAGCCAGGTGTGGGGGTGTTC...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGCAGGTCTCGGGTACTaGAGCCCTCCTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAAGLGY*SPPPPS
Trigger: TGATGGTGGAGGAGGGCTTCAGTACCCGAGACCTGC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGGGGTTGGCGCAGATaGTCTTACTGGCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRRGWRR*SYWQGF
Trigger: GAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCT...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQASQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTCTGCAGCCATCAGCTaGCTTCGCAGCGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQASAAIS*LRSASQ
Trigger: CTGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGCCAAGGGTACCCTTaGCTGCCATCTTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGQGYP*LPSSPP
Trigger: AGGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGCACCCCGAGGAGGAGTaGCAGTTGCGGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQHPEEE*QLRSRG
Trigger: GCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTG...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TCAAAGACCAGCCAGTCCCCTACGTGTAGTTGCGGCAGCCACAGGCCCTCAGCCCAAGGAATGACGTGGTaGCCTGTGAGGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SKTSQSPTCSCGSHRPSAQGMTW*PVRPPE
Trigger: CTCTGGGGGCCTCACAGGCCACCACGTCATTCCTTG...GGCTGAGGGCCTGTGGCTGCCGCAACTACACGTAGGGGACTGGCTGGTCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGGGTCTCCCCAGGGAGTaGATCGGATCCTCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQGLPRE*IGSSAP
Trigger: AGGCGCCGAGGATCCGATTCACTCCCTGGGGAGACC...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGCTGGGTGTTGGGCTaGCCCAAAGGCCATTCACCA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQASWVLG*PKGHSP
Trigger: TGGTGAATGGCCTTTGGGTCAGCCCAACACCCAGCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGGAACCCGGCAGTGTaGAGGAGCCTTTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGNPAV*RSLCPD
Trigger: ATCAGGACAAAGGCTCCTTCACACTGCCGGGTTCCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCAGGAGGAGTGGCAGTTaGGGAGCCGAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RPPGVCFTLTALPTCRESRRSGS*GAEASA
Trigger: AGCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCT...GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCGCTGACCAGGCCCCTTaGACTGCAGAGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RPPGVCFTLTALPTCRESADQAP*TAEEAD
Trigger: GTCTGCCTCCTCTGCAGTGCAAGGGGCCTGGTCAGC...GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAGTGCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGGAGGAGCTGACGGGCTaGATGGAGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KCFLTMAPRSATKKAATSEELTG*MEPLLQ
Trigger: CTGCAGCAGCGGCTCCATCCAGCCCGTCAGCTCCTC...CGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGGCTGCTCCGTGGATaGTTTCTTCTGCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGLLRG*FLLQDG
Trigger: CCCATCCTGCAGAAGAAACCATCCACGGAGCAGCCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGGGGTTGGCGCAGATaGTCTTACTGGCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQARGWRR*SYWQGF
Trigger: GAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQARTCIL*PSSVPI
Trigger: AATGGGCACCGAGCTGGGTCACAAGATGCACGTTCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCAACGCACAGGGTGTCTGTaGTCTCCCAGCCGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ASSLWHPGQPRRRQLPRQRTGCL*SPSRRT
Trigger: TGTCCTGCGGCTGGGAGATCACAGACACCCTGTGCG...TTGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCCCCACCAGGACTGGCTaGGATACTGAAGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RHWTQQYSVASPVLTGTAPTRTG*DTEAGW
Trigger: CCATCCTGCTTCAGTATCTCAGCCAGTCCTGGTGGG...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGCAATGATGCTGACTaGCACAGTGAAGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGNDAD*HSEGRG
Trigger: ACCTCGGCCTTCACTGTGGCAGTCAGCATCATTGCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGTGGATGGTTTCTTCTaGAGGATGGGGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAVDGFF*RMGVGQ
Trigger: CTGCCCTACCCCCATCCTGCAGAAGAAACCATCCAC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp TGCCCATTTCAAACACGAGCCGGGCGTCTGCGATGGACTGAGCATAGGCCTGAGTCTGCAGCCATCAGCTaGCTTCGCAGCGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPFQTRAGRLRWTEHRPESAAIS*LRSASQ
Trigger: CTGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGA...CTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGCCAGGCCCCTTGCACTaGAGAGGAGGCAGACACAGC +
Preference number: 4 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQPGPLH*RGGRHS
Trigger: GCTGTGTCTGCCTCCTCTGCAGTGCAAGGGGCCTGG...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCACCCCGAGGAGGAGTaGCAGTTGCGGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERHPEEE*QLRSRG
Trigger: GCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQARQLRE*ESSVAM
Trigger: CATTGCTACCGATGACTCCCACTCCCTGAGCTGCCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCCACGCCACAGCCCTCTaGGAAGTACAGGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RPPGVCFTLTALPTCRESHATAL*EVQVQG
Trigger: GCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTG...GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp AAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCTaGCCAACCTGCAGGGAGAGCAAGGGTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KRPPGVCFTLTA*PTCRESKGAGS
Trigger: GGACCCTGCACCCTTGCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGGTCTCCCCAGGGAGTaGATCGGATCCTCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERGLPRE*IGSSAP
Trigger: AGGCGCCGAGGATCCGATTCACTCCCTGGGGAGACC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCGCAGGTCTCGGGTACTaGAGCCCTCCTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCAGLGY*SPPPPS
Trigger: TGATGGTGGAGGAGGGCTTCAGTACCCGAGACCTGC...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGCTGGATGGAGCCGCTaGTGCAGCCGCCGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERAGWSR*CSRRLR
Trigger: TCTAAGGCGGCGGCTGCAGCAGCGGCTCCATCCAGC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGCAGCTGGATCCCATaGTTGGCAGCATATTTGATC +
Preference number: 4 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRSSWIP*LAAYLI
Trigger: GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCT...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TACTGGCAGGGATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YWQGFQYAGPTPSLPCWHPGPTG*CCTGAA
Trigger: AGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGG...GTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGGCTTTTCACAGCAGATaGCTGGTTCCAGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRAFHSR*LVPAEN
Trigger: GTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGC...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTGGCATGAGGAGCCACTaGCAGTGGGTCGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGGMRSH*QWVAQQ
Trigger: CTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCC...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGAGGAGCTGACGGGCTaGATGGAGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVEREELTG*MEPLLQ
Trigger: CTGCAGCAGCGGCTCCATCCAGCCCGTCAGCTCCTC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCAGCTACCTCGTCCGTaGTGGCCTGTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERQLPRP*WPVRPP
Trigger: TGGGGGCCTCACAGGCCACCACGGACGAGGTAGCTG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAACCTTCAGCACACCTaGGCTGCTGTTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQANLQHT*AAVALD
Trigger: GTCAAGTGCAACAGCAGCCCAGGTGTGCTGAAGGTT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTCAAAGCTCAGCAGCTaGATCCCATGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQASKLSS*IPCLAA
Trigger: TGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCGATGGTCTTGGAGGTaGAACCATTTTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQARWSWR*NHFPPP
Trigger: GGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCACGCCCTCATCAAGGTaGTACACGATGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQATPSSR*YTMVLE
Trigger: CTCCAAGACCATCGTGTACCACCTTGATGAGGGCGT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGCGGGGGTGGCAGGGTaGGCACCAGAGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAEAGVAG*APESWP
Trigger: TGGCCAGGACTCTGGTGCCCACCCTGCCACCCCCGC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCAAGAATGCCCCCTCAGTaGACTTGCTCAGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPRMPPQ*TCSEEG
Trigger: TCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCT...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CACAGTGAAGGCCGAGGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACAAGCAAGGAATGACGTaGTGGCCTGTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSEGRGHVVAPQLSKDVHKQGMT*WPVRPP
Trigger: TGGGGGCCTCACAGGCCACCACGTCATTCCTTGCTT...GTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACCTCGGCCTTCACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATGTCCGTGGTGGCCTGTaGGGCCCCCAGAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYVRGGL*GPQSEF
Trigger: GAACTCACTCTGGGGGCCTCACAGGCCACCACGGAC...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAVQVQG*VDHGSN
Trigger: ATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTAC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCAAACAGGACTGAGTTaGAGATCCCATACACGCCCT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAQTGLS*RSHTRP
Trigger: AGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCGCACAGGGTGTCTGTaGTCTCCCAGCCGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERRTGCL*SPSRRT
Trigger: TGTCCTGCGGCTGGGAGATCACAGACACCCTGTGCG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTTCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGSQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCCAGGACCCAGTGCGTaGGAGGGAAGTGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCPGPSA*EGSVGV
Trigger: GACTCCCACACTTCCCTCTCACGCACTGGGTCCTGG...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTGGAGGAGGAGTGGCAGTTaGGGAGCCGAGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQDFSDTPNFRLRQLREWRRSGS*GAEASA
Trigger: AGCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCT...CCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGGACCAACTCCATCTCTaGCTTGTTGGCACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEDQLHL*LVGTAK
Trigger: TTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTC...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGTTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEELICAI*LQGLAQ
Trigger: CTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCACGAGCCGGGCGTCTaGGATGGACTGAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERHEPGV*DGLSIG
Trigger: GCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCCTTTGGCCCCTTCTGTaGCAGGGAAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCLWPLL*QGSHHQ
Trigger: TTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAG...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACAGCCAGTCTCAGGGGATaGCAGGGCTGTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HEEERDESDKVSTSGGGTASLRG*QGCRHW
Trigger: CCAGTGCCGACAGCCCTGGCATCCCCTGAGACTGGC...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCCACCCCGAGGAGGAGTaGCAGTTGCGGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFHPEEE*QLRSRG
Trigger: GCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTG...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACAGAGGAGCTGACGGGCTaGATGGAGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HEEERDESDKVSTSGGGTEELTG*MEPLLQ
Trigger: CTGCAGCAGCGGCTCCATCCAGCCCGTCAGCTCCTC...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCAACCTTCAGCACACCTaGGCTGCTGTTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: RHWTQQYSVASPVLTGTANLQHT*AAVALD
Trigger: GTCAAGTGCAACAGCAGCCCAGGTGTGCTGAAGGTT...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGGATTCCAATATGCTaGACCAACTCCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGIPIC*TNSISA
Trigger: GGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCCCACCACCTCCACATaGTGCTTCTTCGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAPTTST*CFFAFS
Trigger: TGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGGG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGCCGGGCGTCTGCGATaGACTGAGCATAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERAGRLR*TEHRPE
Trigger: CTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTGCCGGGCGTCTGCGATaGACTGAGCATAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCAGRLR*TEHRPE
Trigger: CTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGC...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCCTTCAAATCTCACTTTaGCCCCTTCTGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQALQISL*PLLCQG
Trigger: TCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAG...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCAATCCTCCCTGCCAGGCTaGTCTAGCAGAACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASSLWHPGQPRRRQLPRQSSLPG*SSRTSF
Trigger: GAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGA...TTGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGGGGCTGCTCCGTGGATaGTTTCTTCTGCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQGLLRG*FLLQDG
Trigger: CCCATCCTGCAGAAGAAACCATCCACGGAGCAGCCC...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCAAAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: ASSLWHPGQPRRRQLPRQRTCIL*PSSVPI
Trigger: AATGGGCACCGAGCTGGGTCACAAGATGCACGTTCT...TTGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACACGCACAGGGTGTCTGTaGTCTCCCAGCCGCAGGACA +
Preference number: 4 (lower is better)
Translates to: HEEERDESDKVSTSGGGTRTGCL*SPSRRT
Trigger: TGTCCTGCGGCTGGGAGATCACAGACACCCTGTGCG...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTGGTCCCAGATGCATCTCTaGGGCCCCGCTGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: LQDFSDTPNFRLRQLREWSQMHL*GPAGIL
Trigger: GAGAATCCCAGCGGGGCCTCAGAGATGCATCTGGGA...CCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTGGTCTCGAACTCCTaGCCTCAGGTGATCACCTGC +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGLVSNS*PQVITC
Trigger: GCAGGTGATCACCTGAGGTCAGGAGTTCGAGACCAG...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTAGGATGTTCCTCAGGTaGTGCCCCAGGGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGRMFLR*CPREGW
Trigger: CCATCCTTCCCTGGGGCATCACCTGAGGAACATCCT...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGACCAACTCCATCTCTaGCTTGTTGGCACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQADQLHL*LVGTAK
Trigger: TTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACGCCACAGCCCTCTGGGACCAACTCCATCTCTaGCTTGTTGGCACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: GHVVAPQLSKDVHATALWDQLHL*LVGTAK
Trigger: TTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTC...CCAGAGGGCTGTGGCGTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGCAGCTGGATCCCATaGTTGGCAGCATATTTGATC +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQASSWIP*LAAYLI
Trigger: GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCACACGAGCCGGGCGTCTaGGATGGACTGAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSHEPGV*DGLSIG
Trigger: GCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTG...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp ACTGAGCATAGGCCTGAGGGTCAGGACAGCCACTGCCAATGTGAAAACTCACACTCCCCTACGTGTAGTTaGGGCAGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TEHRPEGQDSHCQCENSHSPTCS*GSHRPS
Trigger: TGAGGGCCTGTGGCTGCCGCAACTACACGTAGGGGA...GTGTGAGTTTTCACATTGGCAGTGGCTGTCCTGACCCTCAGGCCTATGCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTAAAAGGGGGAACCCATaGCCACAGTGTAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGKRGNP*PQCRRP
Trigger: TGGGCGCCTACACTGTGGGCATGGGTTCCCCCTTTT...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCCAGGGAGAGCAAGGGTaGAGGGTCCACTCAAAACCT +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCQGEQG*RVHSKP
Trigger: AGGTTTTGAGTGGACCCTGCACCCTTGCTCTCCCTG...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGTRWS*RWNHFP
Trigger: AGGAAAATGGTTCCACCTCCAAGACCATCGTGTACC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCAGGGGAATGGGAAAAATaGAGAGTGACTGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPGEWEK*RVTANG
Trigger: CCCATTAGCAGTCACTCTCCATTTTTCCCATTCCCC...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp CCTTTGCTCAACAGCTCACACACCCCGGGGCATAATTaGGGAACCCGGCAGTGTGAAGGAGCCTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLLNSSHTPGHN*GTRQCEGAFVL
Trigger: CAGGACAAAGGCTCCTTCACACTGCCGGGTTCCCAAATTATGCCCCGGGGTGTGTGAGCTGTTGAGCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp CCATACACGCCCTCATCAAGGTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCCTCCTCCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PYTPSSRWYTMV*EVEPFSSSLPG
Trigger: GCCTGGCAGGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp AGATGGAAGGTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGCCTTGCAGGAGGAGCTaGCGGGCTGGATGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RWKVDLCHQGLGNGKNGEPCRRS*RAGWSR
Trigger: GCGGCTCCATCCAGCCCGTCAGCTCCTCCTGCAAGG...CTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTACCTTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGCCTTGCAGGAGGAGCTaGCGGGCTGGATGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQPCRRS*RAGWSR
Trigger: GCGGCTCCATCCAGCCCGTCAGCTCCTCCTGCAAGG...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGATTTATTTCTTTATTTaGGGCAGGGTCTCGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRIYFFI*GRVSLS
Trigger: ACTGAGCGAGACCCTGCCTCAAATAAAGAAATAAAT...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCTGCCACATTGCCTCATaGGATGACCTCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCCHIAS*DDLKAT
Trigger: CGTGGCTTTGAGGTCATCTCATGAGGCAATGTGGCA...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCGAGTGCTTGGAGATCTaGGATGGAAGAAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RHWTQQYSVASPVLTGTAECLEI*DGRSLR
Trigger: TCTGAGACTTCTTCCATCTCAGATCTCCAAGCACTC...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCTTTGGCCCCTTCTGTaGCAGGGAAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERLWPLL*QGSHHQ
Trigger: TTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCAAAAGGGGGAACCCATaGCCACAGTGTAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERKRGNP*PQCRRP
Trigger: TGGGCGCCTACACTGTGGGCATGGGTTCCCCCTTTT...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATTCTGCAGCCATCAGCTaGCTTCGCAGCGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYSAAIS*LRSASQ
Trigger: CTGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGA...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGTGATGGGGAAATCCTaGCCCAGGCCTAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAEVMGKS*PRPSPG
Trigger: GCCTGGGCTAGGCCTGGGGCAGGATTTCCCCATCAC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGTGGCCAGGACCCAGTaGGTGAGAGGGAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAEVARTQ*VRGKCG
Trigger: CCCACACTTCCCTCTCACGCACTGGGTCCTGGCCAC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAGTGCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGAACCTTCAGCACACCTaGGCTGCTGTTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: KCFLTMAPRSATKKAATSNLQHT*AAVALD
Trigger: GTCAAGTGCAACAGCAGCCCAGGTGTGCTGAAGGTT...CGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAGCCGGGCGTCTGCGATaGACTGAGCATAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTAGRLR*TEHRPE
Trigger: CTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGC...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCTCCTCCCTGCCAGGCTaGTCTAGCAGAACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCSSLPG*SSRTSF
Trigger: GAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGA...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTCACATGATGCTCGCTaGGGTGAAGACAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERSHDAR*GEDRAH
Trigger: GTGGGCCCTGTCTTCACCCCAGCGAGCATCATGTGA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp ACTGAGCATAGGCCTGAGGGTCAGGACAGCCACTGCCAATGTGAAAACTCACACTCACATGATGCTCGCTaGGGTGAAGACAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TEHRPEGQDSHCQCENSHSHDAR*GEDRAH
Trigger: GTGGGCCCTGTCTTCACCCCAGCGAGCATCATGTGA...GTGTGAGTTTTCACATTGGCAGTGGCTGTCCTGACCCTCAGGCCTATGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATTGGGCACCAGAGTCCTaGCCAAGGGTACCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYWAPES*PRVPLP
Trigger: AGGCAAGGGTACCCTTGGCCAGGACTCTGGTGCCCA...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTTATGGCACCAGGCCTaGAGGCCCATGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERLWHQA*RPMRRR
Trigger: TCTCCTCCTCATGGGCCTCCAGGCCTGGTGCCATAA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCCCCGGGGCATAATTTaGGAACCCGGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERPRGII*EPGSVK
Trigger: CTTCACACTGCCGGGTTCCCAAATTATGCCCCGGGG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCTGCTGAGTGGAGGATaGACTGTGGAGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERLLSGG*TVEGKG
Trigger: CCCTTTCCCCTCCACAGTCCATCCTCCACTCAGCAG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAACCTTGCAGGAGGAGCTaGCGGGCTGGATGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKPCRRS*RAGWSR
Trigger: GCGGCTCCATCCAGCCCGTCAGCTCCTCCTGCAAGG...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGAGAACGTGCATCTTGTaGCCCAGCTCGGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQRTCIL*PSSVPI
Trigger: AATGGGCACCGAGCTGGGTCACAAGATGCACGTTCT...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATGGGCTCATCAGTGAGTaGTGGGGAAATCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYGLISE*WGNPAP
Trigger: TGGGGCAGGATTTCCCCATCACTCACTGATGAGCCC...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGGTGTGGGCTCATCAGTaGGTGATGGGGAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQVWAHQ*VMGKSC
Trigger: GCAGGATTTCCCCATCACTCACTGATGAGCCCACAC...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCCATTGCCTCATGAGATaGCCTCAAAGCCACGTACAG +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCHCLMR*PQSHVQ
Trigger: CTGTACGTGGCTTTGAGGTCATCTCATGAGGCAATG...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCCTAGAAAGGCTCCAGTaGGAAATCCATCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: RPPGVCFTLTALPTCRESLERLQ*EIHPNS
Trigger: GGAGTTTGGATGGATTTCTCACTGGAGCCTTTCTAG...GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGAGAATGAGAGAGAGTaGGTGTGCGCGCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAEENERE*VCAQEG
Trigger: CCCCTCCTGCGCGCACACTCACTCTCTCTCATTCTC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TGCCCATTTCAAACACGAGCCGGGCGTCTGCGATGGACTGAGCATAGGCCTGAGAGCAGCTGGATCCCATaGTTGGCAGCATATTTGATC +
Preference number: 4 (lower is better)
Translates to: CPFQTRAGRLRWTEHRPESSWIP*LAAYLI
Trigger: GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCT...CTCAGGCCTATGCTCAGTCCATCGCAGACGCCCGGCTCGTGTTTGAAATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CACAGTGAAGGCCGAGGTCACGTAGTAGCGCCCCAGCTCAGCAAAGATGTCCACACCACCTCCACATGGTaGTTCTTCGCATTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: HSEGRGHVVAPQLSKDVHTTSTW*FFAFSS
Trigger: GCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT...GTGGACATCTTTGCTGAGCTGGGGCGCTACTACGTGACCTCGGCCTTCACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTGTGACCCAGCTCGGTaGCCATTTCAAACACGAGCC +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQCDPAR*PFQTRA
Trigger: GGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTGGTGTGACCCAGCTCGGTaGCCATTTCAAACACGAGCC +
Preference number: 4 (lower is better)
Translates to: LQDFSDTPNFRLRQLREWCDPAR*PFQTRA
Trigger: GGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACA...CCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCACTTTGGCCCCTTCTGTaGCAGGGAAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: ILALGWLFTTFASSISLSLWPLL*QGSHHQ
Trigger: TTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAG...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGGCAATGATGCTGACTaGCACAGTGAAGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERGNDAD*HSEGRG
Trigger: ACCTCGGCCTTCACTGTGGCAGTCAGCATCATTGCC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGGTGGATGGTTTCTTCTaGAGGATGGGGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQVDGFF*RMGVGQ
Trigger: CTGCCCTACCCCCATCCTGCAGAAGAAACCATCCAC...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCAAAAAGGGGGAACCCATaGCCACAGTGTAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ILALGWLFTTFASSISLSKRGNP*PQCRRP
Trigger: TGGGCGCCTACACTGTGGGCATGGGTTCCCCCTTTT...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERVILLF*SHQLPS
Trigger: CGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGAC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTTGTCCTGATAAGCACTaGCAGTCTCAGGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGCPDKH*QSQGMP
Trigger: TGGCATCCCCTGAGACTGGCAGTGCTTATCAGGACA...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAGCAACCTCGGCTCACTaGGACCTCCACCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTATSAH*DLHLPV
Trigger: AACAGGGAGGTGGAGGTCGCAGTGAGCCGAGGTTGC...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGAATTCTAGGCGTGCCTaGGGACGCCACGCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYENSRRA*GRHAVG
Trigger: ACCCACCGCGTGGCGTCCCCAGGCACGCCTAGAATT...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACTAGAGGGTAGCCGGTaGCCACATCAAGGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATLEGSR*PHQGVS
Trigger: TGAGACGCCTTGATGTGGCCACCGGCTACCCTCTAG...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGCTACCTCGTCCGTGGTaGCCTGTGAGGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQLPRPW*PVRPPE
Trigger: CTCTGGGGGCCTCACAGGCCACCACGGACGAGGTAG...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERSASSL*HPGQPR
Trigger: TCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACT...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCSASSL*HPGQPR
Trigger: TCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACT...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp AAGTGCTTCCTCACTATGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGGGGATTCCAATATGCTaGACCAACTCCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KCFLTMAPRSATKKAATSGIPIC*TNSISA
Trigger: GGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCC...CGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAATGTCAAAGCTCAGCAGCTaGATCCCATGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PFSSSLPGWSSRTSFLAMSKLSS*IPCLAA
Trigger: TGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGA...CATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCRQLRE*ESSVAM
Trigger: CATTGCTACCGATGACTCCCACTCCCTGAGCTGCCT...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCCACGCCACAGCCCTCTaGGAAGTACAGGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFHATAL*EVQVQG
Trigger: GCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTG...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATCAGGGCTGTCGGCACTaGACACAGCAATACTCCGTG +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYQGCRH*TQQYSV
Trigger: CACGGAGTATTGCTGTGTCCAGTGCCGACAGCCCTG...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATAGGAGGTACGGCATCTaGCTGCTGAGTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYRRYGI*LLSGGW
Trigger: CCATCCTCCACTCAGCAGCCAGATGCCGTACCTCCT...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATCGTGAGAGGGAAGTGTaGGAGTCAGAGAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYREREV*ESESQL
Trigger: CAGCTGGCTCTCTGACTCCCACACTTCCCTCTCACG...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp CTAGATCCCACCTGGAAAAGGGAGACACCCCTGGCTTaGAGAAAGCACCTCGTTCACTCCAAACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LDPTWKRETPLA*RKHLVHSKPMP
Trigger: TGGCATGGGTTTGGAGTGAACGAGGTGCTTTCTCAAAGCCAGGGGTGTCTCCCTTTTCCAGGTGGGATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGGCAGCCAGGAGGCATaGGGAGCCACTGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHGSQEA*GATASG
Trigger: CCCACTGGCAGTGGCTCCTCATGCCTCCTGGCTGCC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGCCAACAGGAACATCTaGCTTCCAAGGCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATANRNI*LPRQPG
Trigger: TCCTGGCTGCCTTGGAAGTCAGATGTTCCTGTTGGC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGGATGGAGCCGCTGCTaGAGCCGCCGCCTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQGWSRC*SRRLRK
Trigger: CTTTCTAAGGCGGCGGCTGCAGCAGCGGCTCCATCC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CCACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTGGCAATGATGCTGACTaGCACAGTGAAGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PPPPHGASSHFQAGVCRIGNDAD*HSEGRG
Trigger: ACCTCGGCCTTCACTGTGGCAGTCAGCATCATTGCC...AATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGTCCCCTACGTGTAGTTaGGGCAGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYESPTCS*GSHRPS
Trigger: TGAGGGCCTGTGGCTGCCGCAACTACACGTAGGGGA...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGATGGAAGGTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGACAGGGCAGAAACACTaGAGGTGGAGCGCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWKVDLCHQGLGNGKNGETGQKH*RWSAGV
Trigger: CACCCCCGCGCTCCACCTGCAGTGTTTCTGCCCTGT...CTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTACCTTCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGACAGGGCAGAAACACTaGAGGTGGAGCGCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQTGQKH*RWSAGV
Trigger: CACCCCCGCGCTCCACCTGCAGTGTTTCTGCCCTGT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGCTGACCAGGCCCCTTaGACTGCAGAGGAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQADQAP*TAEEAD
Trigger: GTCTGCCTCCTCTGCAGTGCAAGGGGCCTGGTCAGC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCAGGCCTAGCCCAGGCTaGTTTGTGAATCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCRPSPG*FVNQTA
Trigger: GGCAGTTTGATTCACAAAGCAGCCTGGGCTAGGCCT...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TACTGGCAGGGATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACAAAGGGCCGGACTCGTaGCAGGCACTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: YWQGFQYAGPTPSLPCWHKGPDS*QALQKA
Trigger: TGCTTTCTGAAGTGCCTGCCACGAGTCCGGCCCTTT...GTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCATCTTGGCACTGGGGTaGCTCTTTACCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERILALG*LFTTFA
Trigger: GGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CGCCCTCATCAAGGTGGTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCCTATCTTGGCACTGGGGTaGCTCTTTACCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RPHQGGTRWSWRWNHFPPILALG*LFTTFA
Trigger: GGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT...AGGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGAACCATCTTGGCACTaGGGTGGCTCTTTACCACCT +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVEREPSWH*GGSLPP
Trigger: AGGTGGTAAAGAGCCACCCCAGTGCCAAGATGGTTC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTGAACCATCTTGGCACTaGGGTGGCTCTTTACCACCT +
Preference number: 4 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCEPSWH*GGSLPP
Trigger: AGGTGGTAAAGAGCCACCCCAGTGCCAAGATGGTTC...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATRQLRE*ESSVAM
Trigger: CATTGCTACCGATGACTCCCACTCCCTGAGCTGCCT...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCGATGGTCTTGGAGGTaGAACCATTTTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERRWSWR*NHFPPP
Trigger: GGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGAACACCCCCACACCTaGCTGACCAGGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQEHPHT*LTRPLA
Trigger: TGCAAGGGGCCTGGTCAGCCAGGTGTGGGGGTGTTC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GTGGCCAGCCCTGTTCTAACAGGCACTGCCCAAAGAAGCAAAAGCGACCACCAGTGTGTCATCAGGGACTaGGGAATGGGAAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: VASPVLTGTAQRSKSDHQCVIRD*GMGKME
Trigger: CTCCATTTTTCCCATTCCCCAGTCCCTGATGACACA...CTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACAGGGCTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCAACAGGGGCTGCTCCGTaGATGGTTTCAAAAGAGCGC +
Preference number: 4 (lower is better)
Translates to: ILALGWLFTTFASSISLSTGAAP*MVSKER
Trigger: GCGCTCTTTTGAAACCATCCACGGAGCAGCCCCTGT...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 72 bp GAGTTGATCACGGAAGCAATCTCTTCAAATCTCACTTaGGCCCCTTCTGTGCCAGGGAAGCCACCACCAAGG +
Preference number: 4 (lower is better)
Translates to: ELITEAISSNLT*APSVPGKPPPR
Trigger: CCTTGGTGGTGGCTTCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGAGATTGCTTCCGTGATCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp TTGATCTGTGCAATTTGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGCAGCCACTGCCAATGTaGAAACTCACACCCACCACC +
Preference number: 4 (lower is better)
Translates to: LICAICLQGLAQMILLAGQPLPM*KLTPTT
Trigger: GGTGGTGGGTGTGAGTTTTCACATTGGCAGTGGCTG...CCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCGGTCCAAGGCTGAGTTaGTCACGGAAGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: PKEAKATTRCLLYSDCLAGPRLS*SRKQSL
Trigger: AAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACC...GGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CCATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCAAACAGGACTGAGTTaGAGATCCCATACACGCCCT +
Preference number: 4 (lower is better)
Translates to: PSWHWGGSLPPLPAPSHCQTGLS*RSHTRP
Trigger: AGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTG...ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCGTTGTCAAACAGGACTaGGTTGAAGATCCCATACAC +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCVVKQD*VEDPIH
Trigger: GTGTATGGGATCTTCAACTCAGTCCTGTTTGACAAC...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTTTATGTTGCATACTTaGACTACAGCGAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRRPKETPRTPPHLADQAFMLHT*TTASVR
Trigger: TCTTACACTCGCTGTAGTTCAAGTATGCAACATAAA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATGACTGGCTGAGATACTaGAGCAGGATGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYDWLRY*SRMVRL
Trigger: AAGCCTGACCATCCTGCTTCAGTATCTCAGCCAGTC...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAATGCTGGATGGAGCCGCTaGTGCAGCCGCCGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: MLDGSFYKVQCRGMEKENAGWSR*CSRRLR
Trigger: TCTAAGGCGGCGGCTGCAGCAGCGGCTCCATCCAGC...ATTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCTTCAGAAAGCAAAAGTaGTTCCTCACTATGGCACCC +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCFRKQK*FLTMAP
Trigger: GGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAA...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTCCCCTACGTGTAGTTaGGGCAGCCACAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQSPTCS*GSHRPS
Trigger: TGAGGGCCTGTGGCTGCCGCAACTACACGTAGGGGA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAEVILLF*SHQLPS
Trigger: CGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGAC...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCG +
Preference number: 4 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFVILLF*SHQLPS
Trigger: CGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGAC...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACACGACCACCAGGTGTCTaGTTTACTCTGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HEEERDESDKVSTSGGGTRPPGV*FTLTAL
Trigger: CAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGCCTCAGGTGATCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYEPQVIT*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGTGATCACCTGAGG...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCTCTTCCCAGGATTCCTaGGCTTTTCACAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PKEAKATTRCLLYSDCLASSQDS*AFHSRC
Trigger: GCATCTGCTGTGAAAAGCGCAGGAATCCTGGGAAGA...GGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGGGGACAGTAAATGCATaGCCAGCAGTGGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQGTVNA*PAVECL
Trigger: CAAACACTCCACTGCTGGGCATGCATTTACTGTCCC...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCAAGAGAGACTAGGACATaGTATTTTCTAAAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPRETRT*YFLKGD
Trigger: ATCACCCTTTAGAAAATAGCATGTCCTAGTCTCTCT...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TACTGGCAGGGATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACTGGTTCTTAGACTTCTaGAGGATGGGGGTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YWQGFQYAGPTPSLPCWHWFLDF*RMGVGQ
Trigger: CTGCCCTACCCCCATCCTGCAGAAGTCTAAGAACCA...GTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATCAGCTACCTCGTCCGTaGTGGCCTGTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHQLPRP*WPVRPP
Trigger: TGGGGGCCTCACAGGCCACCACGGACGAGGTAGCTG...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTSASSL*HPGQPR
Trigger: TCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACT...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACATCAAAGCTCAGCAGCTaGATCCCATGCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HEEERDESDKVSTSGGGTSKLSS*IPCLAA
Trigger: TGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGA...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCTGCACAGAACCATCTTaGCACTGGGGTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCCTEPS*HWGGSL
Trigger: TAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCA...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTGCACAGAACCATCTTaGCACTGGGGTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERCTEPS*HWGGSL
Trigger: TAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCCCACCACCTCCACATaGTGCTTCTTCGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERPTTST*CFFAFS
Trigger: TGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGGG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTGGCTTCAAATCTCACTTTaGCCCCTTCTGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQDFSDTPNFRLRQLREWLQISL*PLLCQG
Trigger: TCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAG...CCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGCACGCCACAGCCCTCTaGGAAGTACAGGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQHATAL*EVQVQG
Trigger: GCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTG...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CCATTTTCCTCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAATGGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PFSSSLPGWSSRTSFLAMGTRWS*RWNHFP
Trigger: AGGAAAATGGTTCCACCTCCAAGACCATCGTGTACC...CATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCCAAGGTGGTACACGATaGTCTTGGAGGTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERQGGTR*SWRWNH
Trigger: ATGGTTCCACCTCCAAGACCATCGTGTACCACCTTG...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCAACGCCCTCATCAAGGTaGTACACGATGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ILALGWLFTTFASSISLSTPSSR*YTMVLE
Trigger: CTCCAAGACCATCGTGTACCACCTTGATGAGGGCGT...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCATTATATTTACAAAGGTaGGAAGGAGACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPLYLQR*EGDQRR
Trigger: TCTCCTTTGGTCTCCTTCCCACCTTTGTAAATATAA...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CCACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTGGTCCAAGGCTGAGTTaGTCACGGAAGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: PPPPHGASSHFQAGVCRIGPRLS*SRKQSL
Trigger: AAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACC...AATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATVQVQG*VDHGSN
Trigger: ATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTAC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATCAAACAGGACTGAGTTaGAGATCCCATACACGCCCT +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYQTGLS*RSHTRP
Trigger: AGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTG...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAGTGTCTGCTTTACTCTaGCTGCCTTGCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTVSALL*LPCQPA
Trigger: TGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACAC...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGGATGGAGCCGCTGCTaGAGCCGCCGCCTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHGWSRC*SRRLRK
Trigger: CTTTCTAAGGCGGCGGCTGCAGCAGCGGCTCCATCC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCGCAGGGATTCCAATATaGTGGACCAACTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: PKEAKATTRCLLYSDCLAAGIPI*WTNSIS
Trigger: AGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGC...GGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAATCTTGGCACTGGGGTaGCTCTTTACCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTILALG*LFTTFA
Trigger: GGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTCCTCCCTGCCAGGCTaGTCTAGCAGAACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQSSLPG*SSRTSF
Trigger: GAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCCGATGGTCTTGGAGGTaGAACCATTTTCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFRWSWR*NHFPPP
Trigger: GGGAGGAGGAAAATGGTTCCACCTCCAAGACCATCG...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCGTRWS*RWNHFP
Trigger: AGGAAAATGGTTCCACCTCCAAGACCATCGTGTACC...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACAAGGTGGTACACGATaGTCTTGGAGGTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATQGGTR*SWRWNH
Trigger: ATGGTTCCACCTCCAAGACCATCGTGTACCACCTTG...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp TCATTTCAAAAGCCACAGAATGCCCCCTCAGTGGACTaGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFQKPQNAPSVD*LRRGNQLHLGL
Trigger: GAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp ATGGGGGTAGGGCAGATGTTGTCAAACAGGACTGAGTaGAAGATCCCATACACGCCCTCATCAAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: MGVGQMLSNRTE*KIPYTPSSRWY
Trigger: GTACCACCTTGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp ATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAATGCAGGTCTCGGGTACTaGAGCCCTCCTCCACCATCA +
Preference number: 4 (lower is better)
Translates to: MLDGSFYKVQCRGMEKENAGLGY*SPPPPS
Trigger: TGATGGTGGAGGAGGGCTTCAGTACCCGAGACCTGC...ATTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp AGATGGAAGGTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGCAGCCACTGCCAATGTaGAAACTCACACCCACCACC +
Preference number: 4 (lower is better)
Translates to: RWKVDLCHQGLGNGKNGEQPLPM*KLTPTT
Trigger: GGTGGTGGGTGTGAGTTTTCACATTGGCAGTGGCTG...CTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTACCTTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGCAGCCACTGCCAATGTaGAAACTCACACCCACCACC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQQPLPM*KLTPTT
Trigger: GGTGGTGGGTGTGAGTTTTCACATTGGCAGTGGCTG...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTGGACCAACTCCATGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VGADDLTGRDSNMLDQLHVQVQG*VDHGSN
Trigger: ATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTAC...ATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGTTGTCAAACAGGACTaGGTTGAAGATCCCATACAC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERVVKQD*VEDPIH
Trigger: GTGTATGGGATCTTCAACTCAGTCCTGTTTGACAAC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGGCCCAGGCTGCTTTGTaGATCAAACTGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYEAQAAL*IKLPDS
Trigger: GGAATCTGGCAGTTTGATTCACAAAGCAGCCTGGGC...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGGGGACTCTAAAATCTaGACTCCTTTGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATGDSKI*TPLLNS
Trigger: GCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTTCAGAAAGCAAAAGTaGTTCCTCACTATGGCACCC +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERFRKQK*FLTMAP
Trigger: GGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp GCAGGTGTCTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCATTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: AGVCRISVTLQTLGSGSSLICAI*LQGLAQ
Trigger: CTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA...TGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAGACACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTTTCAAGCAGGTGTCTaGAGGATTTCAGTGACACTC +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQFQAGV*RISVTL
Trigger: GAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATACCACCTCCACATGGTaGTTCTTCGCATTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYTTSTW*FFAFSS
Trigger: GCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTGTGACCCAGCTCGGTaGCCATTTCAAACACGAGCC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQCDPAR*PFQTRA
Trigger: GGCTCGTGTTTGAAATGGGCACCGAGCTGGGTCACA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGCTGCTTTACTCTGACTaGCTTGCCAACCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYELLYSD*LANLQG
Trigger: TCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAG...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGTGTTCTAACAGGCACTaGCCAAAGAAGCAAAAGCGA +
Preference number: 4 (lower is better)
Translates to: SGLAQKRESATPGSHCSQCSNRH*PKKQKR
Trigger: TCGCTTTTGCTTCTTTGGGCAGTGCCTGTTAGAACA...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACAGCTAAAGCCCGCAGTTTCTACAAGGTaGAATGCAGGGGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: IPICWTNSISALLAQLKPAVSTR*NAGAWR
Trigger: TCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGC...GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGAAAGGGCCGGACTCGTaGCAGGCACTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQKGPDS*QALQKA
Trigger: TGCTTTCTGAAGTGCCTGCCACGAGTCCGGCCCTTT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp GTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTGGACCAACTCCATTGCACAGAACCATCTTaGCACTGGGGTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VGADDLTGRDSNMLDQLHCTEPS*HWGGSL
Trigger: TAAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCA...ATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACACTTCAAATCTCACTTTaGCCCCTTCTGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTLQISL*PLLCQG
Trigger: TCCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAG...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGACAGGGGCTGCTCCGTaGATGGTTTCTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQTGAAP*MVSSAG
Trigger: TCCTGCAGAAGAAACCATCCACGGAGCAGCCCCTGT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAAAACTAGATCCCACCTaGAAAAGGGAGACACCCCTG +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTKLDPT*KRETPL
Trigger: CAGGGGTGTCTCCCTTTTCCAGGTGGGATCTAGTTT...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTTCACAGCAGATGCCTaGTTCCAGCAGAAAACCTAT +
Preference number: 4 (lower is better)
Translates to: SECKTGPIYRAETLQVERFTADA*FQQKTY
Trigger: ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp CCACAGCCCTCTGGGAAGTACAGGTCCAAGGCTGAGTaGATCACGGAAGCAATCTCTTCAAATCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PQPSGKYRSKAE*ITEAISSNLTL
Trigger: CAAAGTGAGATTTGAAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAAAGGGGTTGGCGCAGATaGTCTTACTGGCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKRGWRR*SYWQGF
Trigger: GAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCT...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CGGCAGTGTGAAGGAGCCTTTGTCCTGATAAGCACTGCCAGTCTCAGGGGATGCTTTATGTTGCATACTTaGACTACAGCGAGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: RQCEGAFVLISTASLRGCFMLHT*TTASVR
Trigger: TCTTACACTCGCTGTAGTTCAAGTATGCAACATAAA...GCATCCCCTGAGACTGGCAGTGCTTATCAGGACAAAGGCTCCTTCACACTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp AGATGGAAGGTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGCACTGTAGCCAGCCATaGGATCTTCCCAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: RWKVDLCHQGLGNGKNGEHCSQP*DLPRIP
Trigger: AGGAATCCTGGGAAGATCTCATGGCTGGCTACAGTG...CTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTACCTTCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGCATTTTCCTCCTCCCTaGCAGGCTGGTCTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQHFPPP*QAGLAE
Trigger: TTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATG...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp ATCTCATTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCCATTTTCCTCCTCCCTaGCAGGCTGGTCTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ISLSKLSSWIPCLAAYLIHFPPP*QAGLAE
Trigger: TTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATG...GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGTCAAAAGCCACAGAATaGCCCCTCAGTGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYESKATE*PLSGLA
Trigger: AGCAAGTCCACTGAGGGGGCATTCTGTGGCTTTTGA...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGAGAAGGGCTGACAGTTaGCCTTGTGTTATGGAACAC +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAERRADS*PCVMEH
Trigger: GTGTTCCATAACACAAGGGCAACTGTCAGCCCTTCT...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCATTCTACAAGGTGCAATaGAGGGGCATGGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ILALGWLFTTFASSISLSFYKVQ*RGMEKE
Trigger: TTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAA...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCACAAGGTGGTACACGATaGTCTTGGAGGTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LSKLSSWIPCLAAYLICAQGGTR*SWRWNH
Trigger: ATGGTTCCACCTCCAAGACCATCGTGTACCACCTTG...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 72 bp GATCCCATGCTTGGCAGCATATTTGATCTGTGCAATTaGCTTACAGGGGTTGGCGCAGATGATCTTACTGGC +
Preference number: 4 (lower is better)
Translates to: DPMLGSIFDLCN*LTGVGADDLTG
Trigger: GCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 72 bp TTCTTAGACTTCTGCAGGATGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTGAAGATCCCATACACG +
Preference number: 4 (lower is better)
Translates to: FLDFCRMGVGQM*SNRTELKIPYT
Trigger: CGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGTCTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGGTCCAAGGCTGAGTTaGTCACGGAAGCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQGPRLS*SRKQSL
Trigger: AAGAGATTGCTTCCGTGATCAACTCAGCCTTGGACC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR TCA 90 bp GTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTGGACCAACTCCATGTTGTCAAACAGGACTaGGTTGAAGATCCCATACAC +
Preference number: 4 (lower is better)
Translates to: VGADDLTGRDSNMLDQLHVVKQD*VEDPIH
Trigger: GTGTATGGGATCTTCAACTCAGTCCTGTTTGACAAC...ATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGATGAGTCAGATAAGGTaGGTACTAGTGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQMSQIR*VLVGEA
Trigger: TGCCTCCCCCACTAGTACTCACCTTATCTGACTCAT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAAGACATGTAGCAGGGTaGGTGGTTCTTAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LSKLSSWIPCLAAYLICARHVAG*VVLRLL
Trigger: CAGAAGTCTAAGAACCACTCACCCTGCTACATGTCT...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CCACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTACACGGCAATGAAATaGATGGACTCTAGAGACATG +
Preference number: 4 (lower is better)
Translates to: PPPPHGASSHFQAGVCRIYTAMK*MDSRDM
Trigger: CATGTCTCTAGAGTCCATTCATTTCATTGCCGTGTA...AATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAGCAGGGATTCCAATATaGTGGACCAACTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LSKLSSWIPCLAAYLICAAGIPI*WTNSIS
Trigger: AGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGC...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp GTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTGGACCAACTCCATTTTCAAGCAGGTGTCTaGAGGATTTCAGTGACACTC +
Preference number: 4 (lower is better)
Translates to: VGADDLTGRDSNMLDQLHFQAGV*RISVTL
Trigger: GAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAA...ATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATCTTTGTGAATCAAACTaGCAGATTCCGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYLCESN*QIPLQF
Trigger: AAACTGCAGCGGAATCTGGCAGTTTGATTCACAAAG...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATAAAGGGCCGGACTCGTaGCAGGCACTTCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHKGPDS*QALQKA
Trigger: TGCTTTCTGAAGTGCCTGCCACGAGTCCGGCCCTTT...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp ATCTCATTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCCCCACCACCTCCACATaGTGCTTCTTCGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ISLSKLSSWIPCLAAYLIPTTST*CFFAFS
Trigger: TGAAAATGCGAAGAAGCACCATGTGGAGGTGGTGGG...GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATACAGGGGCTGCTCCGTaGATGGTTTCTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHTGAAP*MVSSAG
Trigger: TCCTGCAGAAGAAACCATCCACGGAGCAGCCCCTGT...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGGATACTGAAGCAGGATaGTCAGGCTTACCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYEDTEAG*SGLPRE
Trigger: CTCTCTAGGTAAGCCTGACCATCCTGCTTCAGTATC...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGCTTGGAGATCTGAGATaGAAGAAGTCTCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NFILGETESQEVRHLAAELGDLR*KKSQSL
Trigger: CAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACAAGTCAGAGAGCCAGCTaGCCAAGGACTTTAAATTTC +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTSQRAS*PRTLNF
Trigger: GAAATTTAAAGTCCTTGGCCAGCTGGCTCTCTGACT...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAAGGGCTGCTCCGTGGATaGTTTCAAAAGAGCGCTACA +
Preference number: 4 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKGLLRG*FQKSAT
Trigger: TGTAGCGCTCTTTTGAAACCATCCACGGAGCAGCCC...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CAGCCACTGAGGGGGACTCTAAAATCTGAACTCCTTTGCTCAACAGCTCACACACTATTTTCTAAAGGGTaGTCCAGAAGGCTTCACCTA +
Preference number: 4 (lower is better)
Translates to: QPLRGTLKSELLCSTAHTLFSKG*SRRLHL
Trigger: TAGGTGAAGCCTTCTGGATCACCCTTTAGAAAATAG...TGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTTTAGAGTCCCCCTCAGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATTGTTATAGAGTATGTTaGGTGGTGGTAGGTACTATG +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYCYRVC*VVVGTM
Trigger: CATAGTACCTACCACCACTCAACATACTCTATAACA...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATCGGAGCCGAGGCCTCTaGTTAAAACGCATTTACACG +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHRSRGL*LKRIYT
Trigger: CGTGTAAATGCGTTTTAAGCAGAGGCCTCGGCTCCG...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQAGIPI*WTNSIS
Trigger: AGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTTGATCTGTGCAATTTaGTTACAGGGGTTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQLICAI*LQGLAQ
Trigger: CTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGACCACCTCCACATGGTaGTTCTTCGCATTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQTTSTW*FFAFSS
Trigger: GCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATCATTTTCCTCCTCCCTaGCAGGCTGGTCTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHHFPPP*QAGLAE
Trigger: TTCTGCTAGACCAGCCTGGCAGGGAGGAGGAAAATG...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTATGAGCTACGTAACTaGCCATCTCAGTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQYELRN*PSQSLT
Trigger: TGTCAGGGACTGAGATGGGCAGTTACGTAGCTCATA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp AGATGCCTGGTTCCAGCAGAAAACCTATGTCCCTCTCCGCAAAAGAAGTATGAGAAATCTGAACTCCTTTaGTCAACAGCTCACACACCC +
Preference number: 4 (lower is better)
Translates to: RCLVPAENLCPSPQKKYEKSELL*STAHTP
Trigger: GGGTGTGTGAGCTGTTGAGCAAAGGAGTTCAGATTT...CTCATACTTCTTTTGCGGAGAGGGACATAGGTTTTCTGCTGGAACCAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATCTGAGTATGAGAAGATaGAAGCTCAGATCTGTTAAC +
Preference number: 4 (lower is better)
Translates to: PRIPALFTADAWFQQKTYLSMRR*KLRSVN
Trigger: GTTAACAGATCTGAGCTTCCATCTTCTCATACTCAG...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR TCA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAAAGCGCTACACGGCAATaGAATGAATGGACTCTAGAG +
Preference number: 4 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKSATRQ*NEWTLE
Trigger: CTCTAGAGTCCATTCATTTCATTGCCGTGTAGCGCT...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTTTCAAGCAGGTGTCTaGAGGATTTCAGTGACACTC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQFQAGV*RISVTL
Trigger: GAGTGTCACTGAAATCCTGCAGACACCTGCTTGAAA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGGGATTCCAATATGCTaGACCAACTCCATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHGIPIC*TNSISA
Trigger: GGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGTTGCCCTTGTGTTATaGAACACATTATGGAGTTAT +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATVALVL*NTLWSY
Trigger: ATAACTCCATAATGTGTTCCATAACACAAGGGCAAC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp GCAGCATATTTGATCTGTGCAATTTGCTTACAGGGGTaGGCGCAGATGATCTTACTGGCAGGGATTCCAATA +
Preference number: 4 (lower is better)
Translates to: AAYLICAICLQG*AQMILLAGIPI
Trigger: TATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAATATGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR GCA 90 bp AGATGGAAGGTAGATTTGTGTCATCAGGGACTGGGGAATGGGAAAAATGGAGAGGTAACCCTTTCTGATTaGCCTGAGTCTTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: RWKVDLCHQGLGNGKNGEVTLSD*PESFDV
Trigger: GACATCAAAAGACTCAGGGCAATCAGAAAGGGTTAC...CTCTCCATTTTTCCCATTCCCCAGTCCCTGATGACACAAATCTACCTTCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACTGATAGACAATTACTaGCATGGTAATACCTGTAAA +
Preference number: 4 (lower is better)
Translates to: KATECPLSGLAQKRESATLIDNY*HGNTCK
Trigger: TTTACAGGTATTACCATGCCAGTAATTGTCTATCAG...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp ATCTCATTGTCAAAGCTCAGCAGCTGGATCCCATGCTaGGCAGCATATTTGATCTGTGCAATTTGCTTACAG +
Preference number: 4 (lower is better)
Translates to: ISLSKLSSWIPC*AAYLICAICLQ
Trigger: CTGTAAGCAAATTGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR TCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGCTGCAAATGGAACATaGAACACTAGAAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHAANGT*NTRKAP
Trigger: TGGAGCCTTTCTAGTGTTTCATGTTCCATTTGCAGC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR GCA 90 bp ATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAATTTCAGAAAGCAAAAGTaGTTCCTCACTATGGCACCC +
Preference number: 4 (lower is better)
Translates to: MLDGSFYKVQCRGMEKENFRKQK*FLTMAP
Trigger: GGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAA...ATTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652171.1
3UTR CAA 72 bp GACACAGCTGGAAGGAACAGGATTTATGTTGCATACTaGAACTACAGCGAGTGTAAGACTGGTCCTATTTAC +
Preference number: 4 (lower is better)
Translates to: DTAGRNRIYVAY*NYSECKTGPIY
Trigger: GTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAAGTATGCAACATAAATCCTGTTCCTTCCAGCTGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGATTTCACATCCTTGCTaGAAATGGAACATGAAACAC +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQISHPC*KWNMKH
Trigger: GTGTTTCATGTTCCATTTGCAGCAAGGATGTGAAAT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CCA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTTATATTTACAAAGGTaGGAAGGAGACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LNYSECKTGPIYRAETLQLYLQR*EGDQRR
Trigger: TCTCCTTTGGTCTCCTTCCCACCTTTGTAAATATAA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR GCA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATAGCCACATCAAGTTCTaGGTGTATCTTTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHSHIKF*VYLSWK
Trigger: TTTCCAAGAAAGATACACGCAGAACTTGATGTGGCT...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
3UTR CAA 72 bp GCGTGTATCTTTCTTGGAAAAGTAAATTTCACATCCTaGCTGCAAATGGAACATGAAACACTAGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ACIFLGKVNFTS*LQMEHETLERL
Trigger: GAGCCTTTCTAGTGTTTCATGTTCCATTTGCAGCAAGGATGTGAAATTTACTTTTCCAAGAAAGATACACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGTGGCCAAGGGTACCCTaGCCTGCCATCTTCCCCACC +
Preference number: 5 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEWPRVP*PAIFPT
Trigger: GGTGGGGAAGATGGCAGGCAAGGGTACCCTTGGCCA...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS GCA 90 bp CCTCAGCCACGCAATCACAGCCATCAACCGCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCTCCGTGGATGGTTTCTTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: PQPRNHSHQPPGPTG*CCTGAAPWMVSSAG
Trigger: TCCTGCAGAAGAAACCATCCACGGAGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGGCGGTTGATGGCTGTGATTGCGTGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294517.11
ENST00000373441.1
ENST00000373443.7
ENST00000471119.5
ENST00000475935.5
ENST00000478204.5
ENST00000481886.5
ENST00000484656.5
CDS GCA 90 bp CCTCCTCCACCATCACAAAGTCCGATTCACTCAGGTAGCCAGCCATaGCTTGCAGGAGGAGCTGACGGGCTGGATGGAGCCGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPPPSQSPIHSGSQP*LAGGADGLDGAAAA
Trigger: TGCAGCAGCGGCTCCATCCAGCCCGTCAGCTCCTCCTGCAAGGCATGGCTGGCTACCTGAGTGAATCGGACTTTGTGATGGTGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000294517.11
ENST00000373443.7
ENST00000462920.5
ENST00000475935.5
ENST00000478635.5
ENST00000484656.5
ENST00000492420.5
ENST00000497710.5
ENST00000652171.1
CDS GCA 90 bp TTGCACACACCCTCCACGTCATCCTCCTGTTCTGCAGCCATCAGCTaGCTTCGCAGCGCTTCCCTAGGGGTGAGAGAGGGGTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LHTPSTSSSCSAAIS*LRSASLGVREGCCK
Trigger: CTTGCAGCACCCCTCTCTCACCCCTAGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGGTGTGTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp TCCCTCAGGGCTGTGAGCTCCTCTAGGAAAGCCCAGCCTCACTTATaGCCACAGCCAGGTGCCAAGCACATCCCTCACGTGGGACCAGCA +
Preference number: 5 (lower is better)
Translates to: SLRAVSSSRKAQPHL*PQPGAKHIPHVGPA
Trigger: TGCTGGTCCCACGTGAGGGATGTGCTTGGCACCTGGCTGTGGCCATAAGTGAGGCTGGGCTTTCCTAGAGGAGCTCACAGCCCTGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp CCCAATCCCGTCACAACCCGCCCCCAGCACAAGCCCGGGGTTCACTaGGCAAGGGTGGAGAAAGTCAAGAATCCCGGATTTCAGACGGAG +
Preference number: 5 (lower is better)
Translates to: PNPVTTRPQHKPGVH*ARVEKVKNPGFQTE
Trigger: CTCCGTCTGAAATCCGGGATTCTTGACTTTCTCCACCCTTGCCCAGTGAACCCCGGGCTTGTGCTGGGGGCGGGTTGTGACGGGATTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS CCA 90 bp CCACTATCTGAAGCTTCAGGGGAGAACAGGGCTCCACTGCCCACCTaGCACCTACCCTCCCTGCCAGGCTGGTCTAGCAGAACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PLSEASGENRAPLPT*HLPSLPGWSSRTSF
Trigger: GAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGGTAGGTGCCAGGTGGGCAGTGGAGCCCTGTTCTCCCCTGAAGCTTCAGATAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492521.1
CDS-3UTR CAA 90 bp CCAGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGGTGTTAAATACTCCATaGCCCCTACTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGGMRSHCQWVAQQGAWRVLNTP*PLLWAR
Trigger: CCTGGCCCAGAGTAGGGGCAATGGAGTATTTAACAC...CCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS CCA 90 bp AACAGGGCTCCACTGCCCACCTGGCACCTACCCTCCCTGCCAGGCTaGTCTAGCAGAACCTCCTTCTTGGCAATGATGCTGACTGCCACA +
Preference number: 5 (lower is better)
Translates to: NRAPLPTWHLPSLPG*SSRTSFLAMMLTAT
Trigger: TGTGGCAGTCAGCATCATTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGGTAGGTGCCAGGTGGGCAGTGGAGCCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492521.1
CDS-3UTR CAA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCACCCCGGGGCATAATTaGGGAACCCGGCAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RHWTQQYSVASPVLTGTATPGHN*GTRQCE
Trigger: TTCACACTGCCGGGTTCCCAAATTATGCCCCGGGGT...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS TCA 90 bp GCCCCATGGTCTCCATCCCCATGGGTAACACCATTTCAGTCTCCCTaGTCTGCTCGTGCCCTCTCCAGACAGTTCTCAGCCAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: APWSPSPWVTPFQSP*SARALSRQFSARTQ
Trigger: CTGGGTCCTGGCTGAGAACTGTCTGGAGAGGGCACGAGCAGATCAGGGAGACTGAAATGGTGTTACCCATGGGGATGGAGACCATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAACTCCATCTCTGCCTaGTTGGCACAGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQANSISA*LAQLKP
Trigger: GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCATGCACAGAACCATCTaGGCACTGGGGTGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQAMHRTI*ALGWLF
Trigger: AAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCAT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS TCA 90 bp CCAGCTCGCACCCTGTGCATGCCATCCGTGATCCTTCCAAGTACCTaGCCCAGGTTCAGTACTGGCCACAGAGCTACCCTGCTGCTAAGT +
Preference number: 5 (lower is better)
Translates to: PARTLCMPSVILPST*PRFSTGHRATLLLS
Trigger: ACTTAGCAGCAGGGTAGCTCTGTGGCCAGTACTGAACCTGGGTCAGGTACTTGGAAGGATCACGGATGGCATGCACAGGGTGCGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS GCA 90 bp TTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCGTGGTGGCCTGTGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LQGLAQMILLAGIPI*WTNSISAVVACEAP
Trigger: GGGGGCCTCACAGGCCACCACGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478635.5
CDS CCA 90 bp GGACTCGTGGCAGGCACTTCAGAAAGCAAAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: GLVAGTSESKSASSL*HPGQPRRRQLPRPW
Trigger: CCACGGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGCCACGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294517.11
ENST00000373440.6
ENST00000373441.1
ENST00000373443.7
ENST00000462920.5
ENST00000652381.1
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCGGCTCTTTACCACCTTaGCCAGCTCCATCTCATTGT +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQAGSLPP*PAPSHC
Trigger: ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCC...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGGTCCAAGGCTGAGTaGATCACGGAAGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQARSKAE*ITEAIS
Trigger: AGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp TGCCCCTACTCTGGGCCAGGCCTTAAGCTGGGTGTTGGGCTGACCCAAAGGCCATCAAACAGGACTGAGTaGAAGATCCCATACACGCCC +
Preference number: 5 (lower is better)
Translates to: CPYSGPGLKLGVGLTQRPSNRTE*KIPYTP
Trigger: GGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGA...TGGCCTTTGGGTCAGCCCAACACCCAGCTTAAGGCCTGGCCCAGAGTAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGAGGAGGAGTGGCAGTaGCGGAGCCGAGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: SECKTGPIYRAETLQVEREEEWQ*RSRGLL
Trigger: TAAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373443.7
CDS TCA 90 bp TGGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCCTGAATaGCAAGAAGTGGATGAATGTGAGACCCCATCCAGCTCGCACCCT +
Preference number: 5 (lower is better)
Translates to: WHPGQPRRRQLPRPE*QEVDECETPSSSHP
Trigger: AGGGTGCGAGCTGGATGGGGTCTCACATTCATCCACTTCTTGTCATTCAGGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS GCA 90 bp CTGCCTCCCTCTGCAGTCACAGCCACTCTCCATGCGAGCCTTGAATaGACCACACTTGCTCTCCGTTCCTTTCTTCTGGGAAGTCCTACC +
Preference number: 5 (lower is better)
Translates to: LPPSAVTATLHASLE*TTLALRSFLLGSPT
Trigger: GGTAGGACTTCCCAGAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTGTGACTGCAGAGGGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 90 bp CCTGAGACTGGACACAGCAGAGGAATTGAATGTGCCTGGGCAAACTaGTCCTGCTTTCTGTGGCCCTCTCCCTACCCCAAAAGAGGGACC +
Preference number: 5 (lower is better)
Translates to: PETGHSRGIECAWAN*SCFLWPSPYPKRGT
Trigger: GGTCCCTCTTTTGGGGTAGGGAGAGGGCCACAGAAAGCAGGAGCAGTTTGCCCAGGCACATTCAATTCCTCTGCTGTGTCCAGTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp TCCCATACACGCCCTCATCAAGGTGGTACACGATGGTCTTGGAGGTaGAACCATTTTCCTCTGCAGGAGGGGAGGGTTCAGAGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SHTRPHQGGTRWSWR*NHFPLQEGRVQRQH
Trigger: GTGCTGCCTCTGAACCCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CCA 90 bp GACACACTGGCCCACACACCTGAGCCATCCACTATGGCCACCTTTTaGGCTCTTACACATGTCCTCTCCCCAGCCTGGATCCATCCTTGT +
Preference number: 5 (lower is better)
Translates to: DTLAHTPEPSTMATF*ALTHVLSPAWIHPC
Trigger: ACAAGGATGGATCCAGGCTGGGGAGAGGACATGTGTAAGAGCCCAAAAGGTGGCCATAGTGGATGGCTCAGGTGTGTGGGCCAGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp TTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGTGCAGAGGAGGAGTGGCAGTaGCGGAGCCGAGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSKLSSWIPCLAAYLICAEEEWQ*RSRGLC
Trigger: GCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTC...TGCACAGATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCAGCTGGATCCCATGCTaGGCAGCATATTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQASWIPC*AAYLIC
Trigger: ACAGATCAAATATGCTGCCAAGCATGGGATCCAGCT...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS TCA 90 bp CTTAAGTTCGAGTCCGCTCTCTACTGCTTGACCTCGGGTACCCTCTaGCCCTTTCGGAGCCGCAGTTTCCCCAATTGTAAATGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LKFESALYCLTSGTL*PFRSRSFPNCKWGL
Trigger: CAGCCCCCATTTACAATTGGGGAAACTGCGGCTCCGAAAGGGTCAGAGGGTACCCGAGGTCAAGCAGTAGAGAGCGGACTCGAACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000484656.5
CDS GCA 90 bp CAGACTGTGTTATGCCCCTGCTTCAAACTGGTCCATGCCTCCCACTaGTGTCAAAGCGTGTCACTCGGCCTTCAAGCCCTTCCCAGATCT +
Preference number: 5 (lower is better)
Translates to: QTVLCPCFKLVHASH*CQSVSLGLQALPRS
Trigger: AGATCTGGGAAGGGCTTGAAGGCCGAGTGACACGCTTTGACAGCAGTGGGAGGCATGGACCAGTTTGAAGCAGGGGCATAACACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 90 bp ACTGGACACAGCAGAGGAATTGAATGTGCCTGGGCAAACTGCTCCTaGTTTCTGTGGCCCTCTCCCTACCCCAAAAGAGGGACCCTTCAC +
Preference number: 5 (lower is better)
Translates to: TGHSRGIECAWANCS*FLWPSPYPKRGTLH
Trigger: GTGAAGGGTCCCTCTTTTGGGGTAGGGAGAGGGCCACAGAAAGCAGGAGCAGTTTGCCCAGGCACATTCAATTCCTCTGCTGTGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp GGACTCGTGGCAGGCACTTCAGAAAGCAAAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GLVAGTSESKSASSL*HPGQPRRRQLPRPN
Trigger: GTTTGGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGCCACGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481886.5
ENST00000495135.5
CDS CCA 90 bp CATGCCATCCGTGATCCTTCCAAGTACCTGACCCAGGTTCAGTACTaGCCACAGAGCTACCCTGCTGCTAAGTTTTCTGGGCCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: HAIRDPSKYLTQVQY*PQSYPAAKFSGPPQ
Trigger: TTGGGGAGGCCCAGAAAACTTAGCAGCAGGGTAGCTCTGTGGCCAGTACTGAACCTGGGTCAGGTACTTGGAAGGATCACGGATGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 90 bp GTCAGCCACGAAGAAGGCAGCTACCTCGTCCTGAATGACAAGAAGTaGATGAATGTGAGACCCCATCCAGCTCGCACCCTGTGCATGCCA +
Preference number: 5 (lower is better)
Translates to: VSHEEGSYLVLNDKK*MNVRPHPARTLCMP
Trigger: TGGCATGCACAGGGTGCGAGCTGGATGGGGTCTCACATTCATCCACTTCTTGTCATTCAGGACGAGGTAGCTGCCTTCTTCGTGGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 90 bp GGACTCGTGGCAGGCACTTCAGAAAGCAAAAGTGCTTCCTCACTATaGCACCCAGGTCAGCCACGAAGAAGGCAGCTACCTCGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: GLVAGTSESKSASSL*HPGQPRRRQLPRPE
Trigger: TTCAGGACGAGGTAGCTGCCTTCTTCGTGGCTGACCTGGGTGCCATAGTGAGGAAGCACTTTTGCTTTCTGAAGTGCCTGCCACGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGAGGAGGAGTGGCAGTaGCGGAGCCGAGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQEEEWQ*RSRGLC
Trigger: GCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp CGGCACTGGACACAGCAATACTCCGTGGCCAGCCCTGTTCTAACAGGCACTGCCATTTGCTTACAGGGGTaGGCGCAGATGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: RHWTQQYSVASPVLTGTAICLQG*AQMILL
Trigger: CAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAAT...GGCAGTGCCTGTTAGAACAGGGCTGGCCACGGAGTATTGCTGTGTCCAGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp CGACCACCAGGTGTCTGCTTTACTCTGACTGCCTTGCCAACCTGCAGGGAGAGCGGCTCTTTACCACCTTaGCCAGCTCCATCTCATTGT +
Preference number: 5 (lower is better)
Translates to: RPPGVCFTLTALPTCRESGSLPP*PAPSHC
Trigger: ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCC...GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAAGCAGACACCTGGTGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS TCA 90 bp AAGAGGGACCCTTCACCACTGACTAGCTGCGTGACCTCAGAAGAATaGCCTCTCTGTGATAACGCTGACCCCCACAGAGTGTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: KRDPSPLTSCVTSEE*PLCDNADPHRVLCG
Trigger: CCCACACAACACTCTGTGGGGGTCAGCGTTATCACAGAGAGGTCATTCTTCTGAGGTCACGCAGCTAGTCAGTGGTGAAGGGTCCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 90 bp TTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCAAACTCCGTCCTCCTTCGCGG +
Preference number: 5 (lower is better)
Translates to: LQGLAQMILLAGIPI*WTNSISAKLRPPSR
Trigger: CCGCGAAGGAGGACGGAGTTTGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471119.5
ENST00000477570.5
ENST00000483027.5
CDS GCA 90 bp ATGGTCTCCATCCCCATGGGTAACACCATTTCAGTCTCCCTGATCTaGTCGTGCCCTCTCCAGACAGTTCTCAGCCAGGACCCAGATTCA +
Preference number: 5 (lower is better)
Translates to: MVSIPMGNTISVSLI*SCPLQTVLSQDPDS
Trigger: TGAATCTGGGTCCTGGCTGAGAACTGTCTGGAGAGGGCACGAGCAGATCAGGGAGACTGAAATGGTGTTACCCATGGGGATGGAGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp AGCCTCACTTATGGCCACAGCCAGGTGCCAAGCACATCCCTCACGTaGGACCAGCAGCCAACAGCTACTTGTCAAGTTGGATTACACAGA +
Preference number: 5 (lower is better)
Translates to: SLTYGHSQVPSTSLT*DQQPTATCQVGLHR
Trigger: TCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGAGGGATGTGCTTGGCACCTGGCTGTGGCCATAAGTGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTAGCCAGCCATGCCTaGCAGGAGGAGCTGACGGGC +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQVASHA*QEELTG
Trigger: GCCCGTCAGCTCCTCCTGCAAGGCATGGCTGGCTAC...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTAACTCCATCTCTGCCTaGTTGGCACAGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGNSISA*LAQLKP
Trigger: GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTT...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGGVGQM*SNRTEL
Trigger: CAACTCAGTCCTGTTTGACAACATCTGCCCTACCCC...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAGCCCCCTCAGTGGACTaGCTCAGAAGAGGGAATCAG +
Preference number: 5 (lower is better)
Translates to: KATECPLSGLAQKRESATAPSVD*LRRGNQ
Trigger: CTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGC...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS TCA 90 bp AAAGATGTCCACGCCACAGCCCTCTGGGAAGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAATCTTGTTGGCACAGCTAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: KDVHATALWEVQVQG*VDHGSNLVGTAKAQ
Trigger: CTGGGCTTTAGCTGTGCCAACAAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTGGACATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373440.6
ENST00000652381.1
CDS TCA 90 bp TGTAAACAGTTGGCAATCTTGTTCCCACACCCAGTTGAGCCCTGCTaGGCCCAGCTTCTGAACATCCTCATGTGCCCCATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: CKQLAILFPHPVEPC*AQLLNILMCPMVSI
Trigger: GATGGAGACCATGGGGCACATGAGGATGTTCAGAAGCTGGGCTCAGCAGGGCTCAACTGGGTGTGGGAACAAGATTGCCAACTGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 90 bp ATCAAGGTGGTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCTaGAGGAGGGGAGGGTTCAGAGGCAGCACAAGTAGCAATGTGAGG +
Preference number: 5 (lower is better)
Translates to: IKVVHDGLGGGTIFL*RRGGFRGSTSSNVR
Trigger: CCTCACATTGCTACTTGTGCTGCCTCTGAACCCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS GCA 90 bp TCCATCCCCATGGGTAACACCATTTCAGTCTCCCTGATCTGCTCGTaGCCTCTCCAGACAGTTCTCAGCCAGGACCCAGATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: SIPMGNTISVSLICS*PLQTVLSQDPDSSF
Trigger: GAAAGATGAATCTGGGTCCTGGCTGAGAACTGTCTGGAGAGGGCACGAGCAGATCAGGGAGACTGAAATGGTGTTACCCATGGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAAGTAGCCAGCCATGCCTaGCAGGAGGAGCTGACGGGC +
Preference number: 5 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKVASHA*QEELTG
Trigger: GCCCGTCAGCTCCTCCTGCAAGGCATGGCTGGCTAC...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp GGAAGGAGACCAAAGGAGACCCCAAGAACACCCCCACACCTGGCTGACCAGGCCTGCTTGGCAGCATATTaGATCTGTGCAATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: GRRPKETPRTPPHLADQACLAAY*ICAICL
Trigger: TAAGCAAATTGCACAGATCAAATATGCTGCCAAGCA...GGCCTGGTCAGCCAGGTGTGGGGGTGTTCTTGGGGTCTCCTTTGGTCTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp CAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTAGGTCCAAGGCTGAGTaGATCACGGAAGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: QNAPSVDLLRRGNQLHLGRSKAE*ITEAIS
Trigger: AGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCT...ACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SECKTGPIYRAETLQVERGVGQM*SNRTEL
Trigger: CAACTCAGTCCTGTTTGACAACATCTGCCCTACCCC...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp CTGCAGGATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTGGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LQDFSDTPNFRLRQLREWGVGQM*SNRTEL
Trigger: CAACTCAGTCCTGTTTGACAACATCTGCCCTACCCC...CCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATCCTGCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp AGGAGGCATGAGGAGCCACTGCCAGTGGGTCGCTCAGCAGGGAGCTTGGAGGAGGTAAATTTCACATCCTaGCTGCAAATGGAACATGAA +
Preference number: 5 (lower is better)
Translates to: RRHEEPLPVGRSAGSLEEVNFTS*LQMEHE
Trigger: TTCATGTTCCATTTGCAGCAAGGATGTGAAATTTAC...CTCCTCCAAGCTCCCTGCTGAGCGACCCACTGGCAGTGGCTCCTCATGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS CCA 90 bp CTTTCCAAAGTGCAAATCAGACTGTGTTATGCCCCTGCTTCAAACTaGTCCATGCCTCCCACTGCTGTCAAAGCGTGTCACTCGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LSKVQIRLCYAPASN*SMPPTAVKACHSAF
Trigger: GAAGGCCGAGTGACACGCTTTGACAGCAGTGGGAGGCATGGACCAGTTTGAAGCAGGGGCATAACACAGTCTGATTTGCACTTTGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp GATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATGCACAGAACCATCCAAACTCCGTCC +
Preference number: 5 (lower is better)
Translates to: DFSDTPNFRLRQLRE*ESSVAMHRTIQTPS
Trigger: GGACGGAGTTTGGATGGTTCTGTGCATTGCTACCGATGACTCCCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473089.5
CDS-3UTR CAA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATGTAGCCAGCCATGCCTaGCAGGAGGAGCTGACGGGC +
Preference number: 5 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHVASHA*QEELTG
Trigger: GCCCGTCAGCTCCTCCTGCAAGGCATGGCTGGCTAC...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAATGCACAGAACCATCTaGGCACTGGGGTGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KATECPLSGLAQKRESATMHRTI*ALGWLF
Trigger: AAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCAT...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACATCTTCAAATCTCACTTaGGCCCCTTCTGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: KATECPLSGLAQKRESATSSNLT*APSVPG
Trigger: CCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGA...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp ATCTTGGCACTGGGGTGGCTCTTTACCACCTTTGCCAGCTCCATCTCATTGTCATCTTCAAATCTCACTTaGGCCCCTTCTGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ILALGWLFTTFASSISLSSSNLT*APSVPG
Trigger: CCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGA...TGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: SECKTGPIYRAETLQVERWYTMV*EVEPFS
Trigger: GGAAAATGGTTCCACCTCCAAGACCATCGTGTACCA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCTCAAACAGGACTGAGTaGAAGATCCCATACACGCCC +
Preference number: 5 (lower is better)
Translates to: SECKTGPIYRAETLQVERSNRTE*KIPYTP
Trigger: GGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGA...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp GCACTGCCCAAAGAAGCAAAAGCGACCACCAGGTGTCTGCTTTACTCTGACTGCCAAACCCATGCCACATaGCCTCATGAGATGACCTCA +
Preference number: 5 (lower is better)
Translates to: ALPKEAKATTRCLLYSDCQTHAT*PHEMTS
Trigger: TGAGGTCATCTCATGAGGCAATGTGGCATGGGTTTG...GCAGTCAGAGTAAAGCAGACACCTGGTGGTCGCTTTTGCTTCTTTGGGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS CCA 90 bp GATTTCAGTGACACTCCAAACTTTAGGCTCAGGCAGCTCAGGGAGTaGGAGTCATCGGTAGCAATGCACAGAACCATCCTGATGAGACAC +
Preference number: 5 (lower is better)
Translates to: DFSDTPNFRLRQLRE*ESSVAMHRTILMRH
Trigger: GTGTCTCATCAGGATGGTTCTGTGCATTGCTACCGATGACTCCCACTCCCTGAGCTGCCTGAGCCTAAAGTTTGGAGTGTCACTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000497280.1
CDS-3UTR CAA 90 bp TTGATCTGTGCAATTTGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGAACTCCATCTCTGCCTaGTTGGCACAGCTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: LICAICLQGLAQMILLAGNSISA*LAQLKP
Trigger: GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTT...CCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp AGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGGTGGAGCGCATTTGCTTACAGGGGTaGGCGCAGATGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: SECKTGPIYRAETLQVERICLQG*AQMILL
Trigger: CAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAAT...GCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp ATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACAGCTAAAGCCCATGCACAGAACCATCTaGGCACTGGGGTGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: IPICWTNSISALLAQLKPMHRTI*ALGWLF
Trigger: AAAGAGCCACCCCAGTGCCAAGATGGTTCTGTGCAT...GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp CATGAGGAGGAGAGAGATGAGTCAGATAAGGTGAGTACTAGTGGGGGAGGCACATGGTACACGATGGTCTaGGAGGTGGAACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: HEEERDESDKVSTSGGGTWYTMV*EVEPFS
Trigger: GGAAAATGGTTCCACCTCCAAGACCATCGTGTACCA...TGTGCCTCCCCCACTAGTACTCACCTTATCTGACTCATCTCTCTCCTCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS GCA 90 bp GACAAGGCACCGTATGCCCAAATGTCACTGCCTCTCCGAGTCAGTTaGTCCCTCTGTAAAATGGATGAATTGTTTTGGAGAGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: DKAPYAQMSLPLRVS*SLCKMDELFWRAFP
Trigger: TGGGAAGGCTCTCCAAAACAATTCATCCATTTTACAGAGGGAGCAACTGACTCGGAGAGGCAGTGACATTTGGGCATACGGTGCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS CCA 90 bp TCAAACAGGACTGAGTTGAAGATCCCATACACGCCCTCATCAAGGTaGTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SNRTELKIPYTPSSR*YTMVLEVEPFSSAG
Trigger: TCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CCA 90 bp ATACCCATGTTGATCAATGGCTCCACTATCAGAGTTGTAAACAGTTaGCAATCTTGTTCCCACACCCAGTTGAGCCCTGCTGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: IPMLINGSTIRVVNS*QSCSHTQLSPAEPS
Trigger: GCTGGGCTCAGCAGGGCTCAACTGGGTGTGGGAACAAGATTGCCAACTGTTTACAACTCTGATAGTGGAGCCATTGATCAACATGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp CCCAGGATTCCTGCGCTTTTCACAGCAGATGCCTGGTTCCAGCAGAAAACCTATTTTGATCTGTGCAATTaGCTTACAGGGGTTGGCGCA +
Preference number: 5 (lower is better)
Translates to: PRIPALFTADAWFQQKTYFDLCN*LTGVGA
Trigger: TGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAA...ATAGGTTTTCTGCTGGAACCAGGCATCTGCTGTGAAAAGCGCAGGAATCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp AAAGCCACAGAATGCCCCCTCAGTGGACTTGCTCAGAAGAGGGAATCAGCTACAAGCTGGATCCCATGCTaGGCAGCATATTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: KATECPLSGLAQKRESATSWIPC*AAYLIC
Trigger: ACAGATCAAATATGCTGCCAAGCATGGGATCCAGCT...TGTAGCTGATTCCCTCTTCTGAGCAAGTCCACTGAGGGGGCATTCTGTGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCGGCTCTTTACCACCTTaGCCAGCTCCATCTCATTGT +
Preference number: 5 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFGSLPP*PAPSHC
Trigger: ACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCC...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp ATTCCAATATGCTGGACCAACTCCATCTCTGCCTTGTTGGCACAGCTAAAGCCCAGGTCCAAGGCTGAGTaGATCACGGAAGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: IPICWTNSISALLAQLKPRSKAE*ITEAIS
Trigger: AGAGATTGCTTCCGTGATCAACTCAGCCTTGGACCT...GGGCTTTAGCTGTGCCAACAAGGCAGAGATGGAGTTGGTCCAGCATATTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp TTGATCTGTGCAATTTGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGTCAAACAGGACTGAGTaGAAGATCCCATACACGCCC +
Preference number: 5 (lower is better)
Translates to: LICAICLQGLAQMILLAGSNRTE*KIPYTP
Trigger: GGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGA...CCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp TTGATCTGTGCAATTTGCTTACAGGGGTTGGCGCAGATGATCTTACTGGCAGGGATTTGCTTACAGGGGTaGGCGCAGATGATCTTACTG +
Preference number: 5 (lower is better)
Translates to: LICAICLQGLAQMILLAGICLQG*AQMILL
Trigger: CAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAAT...CCCTGCCAGTAAGATCATCTGCGCCAACCCCTGTAAGCAAATTGCACAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp ACCACCTCCACATGGTGCTTCTTCGCATTTTCAAGCAGGTGTCTGCAGGATTTCAGCTGGATCCCATGCTaGGCAGCATATTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: TTSTWCFFAFSSRCLQDFSWIPC*AAYLIC
Trigger: ACAGATCAAATATGCTGCCAAGCATGGGATCCAGCT...GAAATCCTGCAGACACCTGCTTGAAAATGCGAAGAAGCACCATGTGGAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTCTTCAAATCTCACTTaGGCCCCTTCTGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQSSNLT*APSVPG
Trigger: CCCTGGCACAGAAGGGGCCAAAGTGAGATTTGAAGA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp AATTTCATTCTTGGTGAAACGGAATCCCAGGAGGTACGGCATCTGGCTGCTGAGATTGCCCTGAGTCTTTaGATGTCCCAAGCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: NFILGETESQEVRHLAAEIALSL*MSQAFS
Trigger: GCTGAAAGCTTGGGACATCAAAAGACTCAGGGCAAT...CTCAGCAGCCAGATGCCGTACCTCCTGGGATTCCGTTTCACCAAGAATGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp ATCTCATTGTCAAAGCTCAGCAGCTGGATCCCATGCTTGGCAGCATATTTGATCTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: ISLSKLSSWIPCLAAYLIWYTMV*EVEPFS
Trigger: GGAAAATGGTTCCACCTCCAAGACCATCGTGTACCA...GATCAAATATGCTGCCAAGCATGGGATCCAGCTGCTGAGCTTTGACAATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp CTTGGAGATCTGAGATGGAAGAAGTCTCAGAGTCTGATAGACAATTACTGGCATTTTACTCTGACTGCCTaGCCAACCTGCAGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LGDLRWKKSQSLIDNYWHFTLTA*PTCRES
Trigger: GCTCTCCCTGCAGGTTGGCAAGGCAGTCAGAGTAAA...ATGCCAGTAATTGTCTATCAGACTCTGAGACTTCTTCCATCTCAGATCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS GCA 90 bp AGAATTGGGGATAAATTGAGCCCCTCTCTTGCAAATAGCAAGGATTaGGTACCAAATAAGCGAAAGGATAAGATGAGGGCCCTAGGGACC +
Preference number: 5 (lower is better)
Translates to: RIGDKLSPSLANSKD*VPNKRKDKMRALGT
Trigger: GGTCCCTAGGGCCCTCATCTTATCCTTTCGCTTATTTGGTACGCAATCCTTGCTATTTGCAAGAGAGGGGCTCAATTTATCCCCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTTTGATCTGTGCAATTaGCTTACAGGGGTTGGCGCA +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQFDLCN*LTGVGA
Trigger: TGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS-3UTR CAA 90 bp AGTGGACTTGCTCAGAAGAGGGAATCAGCTACACCTGGGTCTCACTGTAGCCAGATTTATGTTGCATACTaGAACTACAGCGAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: SGLAQKRESATPGSHCSQIYVAY*NYSECK
Trigger: CTTACACTCGCTGTAGTTCAAGTATGCAACATAAAT...CTGGCTACAGTGAGACCCAGGTGTAGCTGATTCCCTCTTCTGAGCAAGTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS-3UTR CAA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAATTTGATCTGTGCAATTaGCTTACAGGGGTTGGCGCA +
Preference number: 5 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKFDLCN*LTGVGA
Trigger: TGCGCCAACCCCTGTAAGCAAATTGCACAGATCAAA...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS CCA 90 bp CAATCCCACAAACTGCTTCTCCTCCTACATACCCATGTTGATCAATaGCTCCACTATCAGAGTTGTAAACAGTTGGCAATCTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: QSHKLLLLLHTHVDQ*LHYQSCKQLAILFP
Trigger: TGGGAACAAGATTGCCAACTGTTTACAACTCTGATAGTGGAGCCATTGATCAACATGGGTATGTAGGAGGAGAAGCAGTTTGTGGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 90 bp ACAGAGATGACCAAACAGTACTGTTGTTCTGAAGGAGCTTGGGTCTaGAAGAAAAGGAACCCCTTAAGTACTTACAAGTCCATTCAGCAG +
Preference number: 5 (lower is better)
Translates to: TEMTKQYCCSEGAWV*KKRNPLSTYKSIQQ
Trigger: CTGCTGAATGGACTTGTAAGTACTTAAGGGGTTCCTTTTCTTCCAGACCCAAGCTCCTTCAGAACAACAGTACTGTTTGGTCATCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS TCA 90 bp AACGTTATGCTAAGGGACAGAGATGACCAAACAGTACTGTTGTTCTaGAGGAGCTTGGGTCTGGAAGAAAAGGAACCCCTTAAGTACTTA +
Preference number: 5 (lower is better)
Translates to: NVMLRDRDDQTVLLF*RSLGLEEKEPLKYL
Trigger: TAAGTACTTAAGGGGTTCCTTTTCTTCCAGACCCAAGCTCCTTCAGAACAACAGTACTGTTTGGTCATCTCTGTCCCTTAGCATAACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 90 bp AAGGAACCCCTTAAGTACTTACAAGTCCATTCAGCAGATGTTAGATaGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAA +
Preference number: 5 (lower is better)
Translates to: KEPLKYLQVHSADVR*QFLQGAMQGHGERK
Trigger: TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATCTGCTGAATGGACTTGTAAGTACTTAAGGGGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGTGCTTGGCAGCATATTaGATCTGTGCAATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQCLAAY*ICAICL
Trigger: TAAGCAAATTGCACAGATCAAATATGCTGCCAAGCA...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS TCA 90 bp GGTAATAGCATCATTGGGCACACAGCATCATTGGGAAATGCAAATTaGGTCATTCAGCTCCGAAGGAGCATAATATATACTGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: GNSIIGHTASLGNAN*VIQLRRSIIYTVGK
Trigger: TTTCCCCACAGTATATATTATGCTCCTTCGGAGCTGAATGACTCAATTTGCATTTCCCAATGATGCTGTGTGCCCAATGATGCTATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS-3UTR CAA 90 bp GATGTTAGATGGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGAGAAAGAAAATGCTTGGCAGCATATTaGATCTGTGCAATTTGCTTA +
Preference number: 5 (lower is better)
Translates to: DVRWQFLQGAMQGHGERKCLAAY*ICAICL
Trigger: TAAGCAAATTGCACAGATCAAATATGCTGCCAAGCA...TTTTCTTTCTCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652171.1
CDS-3UTR CAA 90 bp TTGAACTACAGCGAGTGTAAGACTGGTCCTATTTACAGGGCAGAAACACTGCAGATTTATGTTGCATACTaGAACTACAGCGAGTGTAAG +
Preference number: 5 (lower is better)
Translates to: LNYSECKTGPIYRAETLQIYVAY*NYSECK
Trigger: CTTACACTCGCTGTAGTTCAAGTATGCAACATAAAT...CTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTCGCTGTAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000373443.7
CDS GCA 90 bp CCTCAACAAGGGAAAGAAATCCACATGTATCGAGCATTTACTACATaGCAGACATCATGCCAGGCACTTATATTATCTATTTGTATCTTC +
Preference number: 5 (lower is better)
Translates to: PQQGKEIHMYRAFTT*QTSCQALILSICIF
Trigger: GAAGATACAAATAGATAATATAAGTGCCTGGCATGATGTCTGGCATGTAGTAAATGCTCGATACATGTGGATTTCTTTCCCTTGTTGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp GCTAGAATTCTAGGCGTGCCTGGGGACGCCACGCGGTaGGTGGGGGCCGCAAGCTCCAAACTCCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: ARILGVPGDATR*VGAASSKLRPP
Trigger: AGGAGGACGGAGTTTGGAGCTTGCGGCCCCCACCCACCGCGTGGCGTCCCCAGGCACGCCTAGAATTCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294517.11
CDS GCA 72 bp CGCAATCACAGCCATCAACCGCCGGGCCCCACAGGCTaGTGCTGTACAGGGGCTGCTCCGTGGATGGTTTCT +
Preference number: 6 (lower is better)
Translates to: RNHSHQPPGPTG*CCTGAAPWMVS
Trigger: AGAAACCATCCACGGAGCAGCCCCTGTACAGCAGCAGCCTGTGGGGCCCGGCGGTTGATGGCTGTGATTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294517.11
ENST00000373441.1
ENST00000373443.7
ENST00000471119.5
ENST00000475935.5
ENST00000478204.5
ENST00000481886.5
ENST00000484656.5
CDS GCA 72 bp CCCTCCACGTCATCCTCCTGTTCTGCAGCCATCAGCTaGCTTCGCAGCGCTTCCCTAGGGGTGAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PSTSSSCSAAIS*LRSASLGVREG
Trigger: CCCCTCTCTCACCCCTAGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp TGCTGCAGCCGCCGCCTTAGAAAGTATGCAACACACTaGGGGGCGAGGGGAGATGAAGGGAACCGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: CCSRRLRKYATH*GARGDEGNRWG
Trigger: CCCCCAGCGGTTCCCTTCATCTCCCCTCGCCCCGCAGTGTGTTGCATACTTTCTAAGGCGGCGGCTGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS TCA 72 bp TTTACACGGCTTCGGCCCATAGGTCTCCCCAGGGAGTaGATCGGATCCTCGGCGCCTCCGCTCTCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: FTRLRPIGLPRE*IGSSAPPLSRF
Trigger: GAAGCGAGAGAGCGGAGGCGCCGAGGATCCGATTCACTCCCTGGGGAGACCTATGGGCCGAAGCCGTGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000294517.11
ENST00000373443.7
ENST00000462920.5
ENST00000471119.5
ENST00000473089.5
ENST00000475935.5
ENST00000477570.5
ENST00000478635.5
ENST00000481886.5
ENST00000483027.5
ENST00000492420.5
ENST00000495135.5
ENST00000497710.5
CDS GCA 72 bp CGAAACTTGTGCAACACCCCGAGGAGGAGTGGCAGTTaGGGAGCCGAGGCCTCTGCTGACAGGAGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: RNLCNTPRRSGS*GAEASADRRQK
Trigger: CTTCTGCCTCCTGTCAGCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTGTTGCACAAGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000462920.5
ENST00000471119.5
ENST00000481886.5
ENST00000492420.5
ENST00000652171.1
CDS GCA 72 bp ACAGGGCTCCACTGCCCACCTGGCACCTACCCTCCCTaGCAGGCTGGTCTAGCAGAACCTCCTTCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: TGLHCPPGTYPP*QAGLAEPPSWQ
Trigger: TTGCCAAGAAGGAGGTTCTGCTAGACCAGCCTGGCAGGGAGGGTAGGTGCCAGGTGGGCAGTGGAGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492521.1
CDS GCA 72 bp AGGCTTGCACACACCCTCCACGTCATCCTCCTGTTCTaGAGCCATCAGCTGCCTTCGCAGCGCTTCCCTAGG +
Preference number: 6 (lower is better)
Translates to: RLAHTLHVILLF*SHQLPSQRFPR
Trigger: CCTAGGGAAGCGCTGCGAAGGCAGCTGATGGCTGCAGAACAGGAGGATGACGTGGAGGGTGTGTGCAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp CAGCCATTTCCCTCTGCTCTCAGGCCCTGCAAGATCTaGCTCTACCCGCCTCTTCCACCCACTCCTGGACAC +
Preference number: 6 (lower is better)
Translates to: QPFPSALRPCKI*LYPPLPPTPGH
Trigger: GTGTCCAGGAGTGGGTGGAAGAGGCGGGTAGAGCCAGATCTTGCAGGGCCTGAGAGCAGAGGGAAATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp GTGACCTCGAAACTTGTGCAACACCCCGAGGAGGAGTaGCAGTTGCGGAGCCGAGGCCTCTGCTTAAAACGC +
Preference number: 6 (lower is better)
Translates to: VTSKLVQHPEEE*QLRSRGLCLKR
Trigger: GCGTTTTAAGCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTGTTGCACAAGTTTCGAGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294517.11
ENST00000473089.5
ENST00000483027.5
ENST00000495135.5
ENST00000497710.5
CDS CCA 72 bp GCTGTGAGCTCCTCTAGGAAAGCCCAGCCTCACTTATaGCCACAGCCAGGTGCCAAGCACATCCCTCACGTG +
Preference number: 6 (lower is better)
Translates to: AVSSSRKAQPHL*PQPGAKHIPHV
Trigger: CACGTGAGGGATGTGCTTGGCACCTGGCTGTGGCCATAAGTGAGGCTGGGCTTTCCTAGAGGAGCTCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp GTCACAACCCGCCCCCAGCACAAGCCCGGGGTTCACTaGGCAAGGGTGGAGAAAGTCAAGAATCCCGGATTT +
Preference number: 6 (lower is better)
Translates to: VTTRPQHKPGVH*ARVEKVKNPGF
Trigger: AAATCCGGGATTCTTGACTTTCTCCACCCTTGCCCAGTGAACCCCGGGCTTGTGCTGGGGGCGGGTTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS TCA 72 bp TTTCTTCTGGGAAGTCCTACCACCCACTCCTGTAGTTaGCTCCCACTTCCTCAGGGAGGCCTGGGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: FLLGSPTTHSCS*LPLPQGGLGLR
Trigger: CCTGAGGCCCAGGCCTCCCTGAGGAAGTGGGAGTCAACTACAGGAGTGGGTGGTAGGACTTCCCAGAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp GACCCCATCCAGCTCGCACCCTGTGCATGCCATCCGTaGTCCTTCCAAGTACCTGACCCAGGTTCAGTACTG +
Preference number: 6 (lower is better)
Translates to: DPIQLAPCACHP*SFQVPDPGSVL
Trigger: CAGTACTGAACCTGGGTCAGGTACTTGGAAGGATCACGGATGGCATGCACAGGGTGCGAGCTGGATGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp GCCCACACACCTGAGCCATCCACTATGGCCACCTTTTaGGCTCTTACACATGTCCTCTCCCCAGCCTGGATC +
Preference number: 6 (lower is better)
Translates to: AHTPEPSTMATF*ALTHVLSPAWI
Trigger: GATCCAGGCTGGGGAGAGGACATGTGTAAGAGCCCAAAAGGTGGCCATAGTGGATGGCTCAGGTGTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp ACCCTGTGCATGCCATCCGTGATCCTTCCAAGTACCTaGCCCAGGTTCAGTACTGGCCACAGAGCTACCCTG +
Preference number: 6 (lower is better)
Translates to: TLCMPSVILPST*PRFSTGHRATL
Trigger: CAGGGTAGCTCTGTGGCCAGTACTGAACCTGGGTCAGGTACTTGGAAGGATCACGGATGGCATGCACAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp CGCCCTCATCAAGGTGGTACACGATGGTCTTGGAGGTaGAACCATTTTCCTCTGCAGGAGGGGAGGGTTCAG +
Preference number: 6 (lower is better)
Translates to: RPHQGGTRWSWR*NHFPLQEGRVQ
Trigger: CTGAACCCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CCA 72 bp GTGACCTCGAAACTTGTGCAACACCCCGAGGAGGAGTaGCAGTTGCGGAGCCGAGGCCTCTTAAAACGCATT +
Preference number: 6 (lower is better)
Translates to: VTSKLVQHPEEE*QLRSRGLLKRI
Trigger: AATGCGTTTTAAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTGTTGCACAAGTTTCGAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373443.7
ENST00000475935.5
ENST00000477570.5
ENST00000478635.5
CDS CCA 72 bp TATGGCCACAGCCAGGTGCCAAGCACATCCCTCACGTaGGACCAGCAGCCAACAGCTACTTGTCAAGTTGGA +
Preference number: 6 (lower is better)
Translates to: YGHSQVPSTSLT*DQQPTATCQVG
Trigger: TCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGAGGGATGTGCTTGGCACCTGGCTGTGGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp GCATGCCTCTTGCCTCACTGGATCCCAGCACTAGCCTaGTGGGGCAGGCAGGGCTACTGTTACGCTTATTTT +
Preference number: 6 (lower is better)
Translates to: ACLLPHWIPALA*WGRQGYCYAYF
Trigger: AAAATAAGCGTAACAGTAGCCCTGCCTGCCCCACCAGGCTAGTGCTGGGATCCAGTGAGGCAAGAGGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp CCTGAGACTGGACACAGCAGAGGAATTGAATGTGCCTaGGCAAACTGCTCCTGCTTTCTGTGGCCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PETGHSRGIECA*ANCSCFLWPSP
Trigger: GGGAGAGGGCCACAGAAAGCAGGAGCAGTTTGCCCAGGCACATTCAATTCCTCTGCTGTGTCCAGTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp TGGACACACTGGCCCACACACCTGAGCCATCCACTATaGCCACCTTTTGGGCTCTTACACATGTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: WTHWPTHLSHPL*PPFGLLHMSSP
Trigger: GGGAGAGGACATGTGTAAGAGCCCAAAAGGTGGCCATAGTGGATGGCTCAGGTGTGTGGGCCAGTGTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 90 bp CTGCAGTCACAGCCACTCTCCATGCGAGCCTTGAATGCACCACACTaGCTCTCCGTTCCTTTCTTCTGGGAAGTCCTACCACCCACTCCT +
Preference number: 6 (lower is better)
Translates to: LQSQPLSMRALNAPH*LSVPFFWEVLPPTP
Trigger: AGGAGTGGGTGGTAGGACTTCCCAGAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTGTGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp GAGTCCGCTCTCTACTGCTTGACCTCGGGTACCCTCTaGCCCTTTCGGAGCCGCAGTTTCCCCAATTGTAAA +
Preference number: 6 (lower is better)
Translates to: ESALYCLTSGTL*PFRSRSFPNCK
Trigger: TTTACAATTGGGGAAACTGCGGCTCCGAAAGGGTCAGAGGGTACCCGAGGTCAAGCAGTAGAGAGCGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294517.11
ENST00000484656.5
CDS TCA 72 bp CACGCCACAGCCCTCTGGGAAGTACAGGTCCAAGGCTaGGTTGATCACGGAAGCAATCTTGTTGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: HATALWEVQVQG*VDHGSNLVGTA
Trigger: AGCTGTGCCAACAAGATTGCTTCCGTGATCAACTCAGCCTTGGACCTGTACTTCCCAGAGGGCTGTGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373440.6
ENST00000652381.1
CDS TCA 72 bp CCTAACGTAAGGCCTGATGTCAGGGTTCACTGGATGTaGCTCCCCCATCTTGCATGCCTCTTGCCTCACTGG +
Preference number: 6 (lower is better)
Translates to: PNVRPDVRVHWM*LPHLACLLPHW
Trigger: CCAGTGAGGCAAGAGGCATGCAAGATGGGGGAGTCACATCCAGTGAACCCTGACATCAGGCCTTACGTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp TCTCCATCCCCATGGGTAACACCATTTCAGTCTCCCTaGTCTGCTCGTGCCCTCTCCAGACAGTTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SPSPWVTPFQSP*SARALSRQFSA
Trigger: GGCTGAGAACTGTCTGGAGAGGGCACGAGCAGATCAGGGAGACTGAAATGGTGTTACCCATGGGGATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp TTGGCAATCTTGTTCCCACACCCAGTTGAGCCCTGCTaGGCCCAGCTTCTGAACATCCTCATGTGCCCCATG +
Preference number: 6 (lower is better)
Translates to: LAILFPHPVEPC*AQLLNILMCPM
Trigger: CATGGGGCACATGAGGATGTTCAGAAGCTGGGCTCAGCAGGGCTCAACTGGGTGTGGGAACAAGATTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp GGTCTAAAACCAGATCCTGCTCAGCCAACCACTATCTaGAGCTTCAGGGGAGAACAGGGCTCCACTGCCCAC +
Preference number: 6 (lower is better)
Translates to: GLKPDPAQPTTI*SFRGEQGSTAH
Trigger: GTGGGCAGTGGAGCCCTGTTCTCCCCTGAAGCTTCAGATAGTGGTTGGCTGAGCAGGATCTGGTTTTAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492521.1
CDS GCA 72 bp GTACACGATGGTCTTGGAGGTGGAACCATTTTCCTCTaGAGGAGGGGAGGGTTCAGAGGCAGCACAAGTAGC +
Preference number: 6 (lower is better)
Translates to: VHDGLGGGTIFL*RRGGFRGSTSS
Trigger: GCTACTTGTGCTGCCTCTGAACCCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS GCA 72 bp TTATGCCCCTGCTTCAAACTGGTCCATGCCTCCCACTaGTGTCAAAGCGTGTCACTCGGCCTTCAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LCPCFKLVHASH*CQSVSLGLQAL
Trigger: AAGGGCTTGAAGGCCGAGTGACACGCTTTGACAGCAGTGGGAGGCATGGACCAGTTTGAAGCAGGGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp TCAGACTGTGTTATGCCCCTGCTTCAAACTGGTCCATaGCTCCCACTGCTGTCAAAGCGTGTCACTCGGCCT +
Preference number: 6 (lower is better)
Translates to: SDCVMPLLQTGP*LPLLSKRVTRP
Trigger: AGGCCGAGTGACACGCTTTGACAGCAGTGGGAGGCATGGACCAGTTTGAAGCAGGGGCATAACACAGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp ATCCCCATGGGTAACACCATTTCAGTCTCCCTGATCTaGTCGTGCCCTCTCCAGACAGTTCTCAGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: IPMGNTISVSLI*SCPLQTVLSQD
Trigger: GTCCTGGCTGAGAACTGTCTGGAGAGGGCACGAGCAGATCAGGGAGACTGAAATGGTGTTACCCATGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp CATACACGCCCTCATCAAGGTGGTACACGATGGTCTTaGAGGTGGAACCATTTTCCTCTGCAGGAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: HTRPHQGGTRWS*RWNHFPLQEGR
Trigger: CCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CCA 72 bp GCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTaGACCAACTCCATCTCTGCCGTGGTGGCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: AQMILLAGIPIC*TNSISAVVACE
Trigger: CTCACAGGCCACCACGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478635.5
CDS CAA 72 bp TCGAAACTTGTGCAACACCCCGAGGAGGAGTGGCAGTaGCGGAGCCGAGGCCTCTGCTTAAAACGCATTTAC +
Preference number: 6 (lower is better)
Translates to: SKLVQHPEEEWQ*RSRGLCLKRIY
Trigger: GTAAATGCGTTTTAAGCAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTGTTGCACAAGTTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294517.11
ENST00000473089.5
ENST00000483027.5
ENST00000495135.5
ENST00000497710.5
CDS CAA 72 bp CCATACACGCCCTCATCAAGGTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCCTCTGCAGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: PYTPSSRWYTMV*EVEPFSSAGGE
Trigger: CTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CAA 72 bp TCGAAACTTGTGCAACACCCCGAGGAGGAGTGGCAGTaGCGGAGCCGAGGCCTCTTAAAACGCATTTACACG +
Preference number: 6 (lower is better)
Translates to: SKLVQHPEEEWQ*RSRGLLKRIYT
Trigger: CGTGTAAATGCGTTTTAAGAGGCCTCGGCTCCGCAACTGCCACTCCTCCTCGGGGTGTTGCACAAGTTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373443.7
ENST00000475935.5
ENST00000477570.5
ENST00000478635.5
CDS CAA 72 bp CTCCCTCTGCAGTCACAGCCACTCTCCATGCGAGCCTaGAATGCACCACACTTGCTCTCCGTTCCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LPLQSQPLSMRA*NAPHLLSVPFF
Trigger: GAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTGTGACTGCAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 90 bp CCTCTGCTGGACAAACCTTGGCACTGGGGTGGCTCTTTACCACCTTaGCCAGCTCCATCTCATTGTCAAAGCTCAGCAGCTGGATCCCAT +
Preference number: 6 (lower is better)
Translates to: PLLDKPWHWGGSLPP*PAPSHCQSSAAGSH
Trigger: ATGGGATCCAGCTGCTGAGCTTTGACAATGAGATGGAGCTGGCAAAGGTGGTAAAGAGCCACCCCAGTGCCAAGGTTTGTCCAGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478204.5
CDS TCA 72 bp TCCCTCTGCAGTCACAGCCACTCTCCATGCGAGCCTTaGATGCACCACACTTGCTCTCCGTTCCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SLCSHSHSPCEP*MHHTCSPFLSS
Trigger: AGAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTGTGACTGCAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp CCTTCACCACTGACTAGCTGCGTGACCTCAGAAGAATaGCCTCTCTGTGATAACGCTGACCCCCACAGAGTG +
Preference number: 6 (lower is better)
Translates to: PSPLTSCVTSEE*PLCDNADPHRV
Trigger: CACTCTGTGGGGGTCAGCGTTATCACAGAGAGGTCATTCTTCTGAGGTCACGCAGCTAGTCAGTGGTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp TCTGCAGTCACAGCCACTCTCCATGCGAGCCTTGAATaGACCACACTTGCTCTCCGTTCCTTTCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: SAVTATLHASLE*TTLALRSFLLG
Trigger: TCCCAGAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTGTGACTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp TTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCGTGGTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: LAQMILLAGIPI*WTNSISAVVAC
Trigger: ACAGGCCACCACGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478635.5
CDS GCA 72 bp AGAATCCCGGATTTCAGACGGAGACAAGGCACCGTATaGCCAAATGTCACTGCCTCTCCGAGTCAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: RIPDFRRRQGTV*PNVTASPSQLL
Trigger: GAGCAACTGACTCGGAGAGGCAGTGACATTTGGGCATACGGTGCCTTGTCTCCGTCTGAAATCCGGGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS CCA 72 bp GAAGAAGGCAGCTACCTCGTCCTGAATGACAAGAAGTaGATGAATGTGAGACCCCATCCAGCTCGCACCCTG +
Preference number: 6 (lower is better)
Translates to: EEGSYLVLNDKK*MNVRPHPARTL
Trigger: CAGGGTGCGAGCTGGATGGGGTCTCACATTCATCCACTTCTTGTCATTCAGGACGAGGTAGCTGCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CAA 72 bp CAGCCACTCTCCATGCGAGCCTTGAATGCACCACACTaGCTCTCCGTTCCTTTCTTCTGGGAAGTCCTACCA +
Preference number: 6 (lower is better)
Translates to: QPLSMRALNAPH*LSVPFFWEVLP
Trigger: TGGTAGGACTTCCCAGAAGAAAGGAACGGAGAGCAAGTGTGGTGCATTCAAGGCTCGCATGGAGAGTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 90 bp TTGAAGATCCCATACACGCCCTCATCAAGGTGGTACACGATGGTCTaGGAGGTGGAACCATTTTCCTCTGCAGGAGGGGAGGGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: LKIPYTPSSRWYTMV*EVEPFSSAGGEGSE
Trigger: CTCTGAACCCTCCCCTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CAA 90 bp ACGTGGGGTAAGCTCACCTTCTGCAGGATGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTGAAGATCCCATACACGCCCTCATCA +
Preference number: 6 (lower is better)
Translates to: TWGKLTFCRMGVGQM*SNRTELKIPYTPSS
Trigger: TGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGGTGAGCTTACCCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373440.6
CDS CCA 72 bp AGATCCCATACACGCCCTCATCAAGGTGGTACACGATaGTCTTGGAGGTGGAACCATTTTCCTCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RSHTRPHQGGTR*SWRWNHFPLQE
Trigger: CTCCTGCAGAGGAAAATGGTTCCACCTCCAAGACCATCGTGTACCACCTTGATGAGGGCGTGTATGGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373441.1
CDS CCA 72 bp TTGAAATACACACACACAACTGAAAACAGGCCCACGTaGGGTAAGCTCACCTTCTGCAGGATGGGGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LKYTHTTENRPT*GKLTFCRMGVG
Trigger: CCCTACCCCCATCCTGCAGAAGGTGAGCTTACCCCACGTGGGCCTGTTTTCAGTTGTGTGTGTGTATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373440.6
CDS CCA 72 bp GCGCAGATGATCTTACTGGCAGGGATTCCAATATGCTaGACCAACTCCATCTCTGCCAAACTCCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: AQMILLAGIPIC*TNSISAKLRPP
Trigger: AGGAGGACGGAGTTTGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471119.5
ENST00000477570.5
ENST00000483027.5
CDS CCA 72 bp GGGCAGGCAGGGCTACTGTTACGCTTATTTTCTAGATaGAAAGACCAAGGCTCAGCAAGCAGGCAGACCAAG +
Preference number: 6 (lower is better)
Translates to: GQAGLLLRLFSR*KDQGSASRQTK
Trigger: CTTGGTCTGCCTGCTTGCTGAGCCTTGGTCTTTCCATCTAGAAAATAAGCGTAACAGTAGCCCTGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 90 bp TGCTCCGTGGATGGTTTCTTCTGCAGGATGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTGAAGATCCCATACACGCCCTCATCA +
Preference number: 6 (lower is better)
Translates to: CSVDGFFCRMGVGQM*SNRTELKIPYTPSS
Trigger: TGATGAGGGCGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGAAACCATCCACGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294517.11
ENST00000373441.1
ENST00000373443.7
ENST00000471119.5
ENST00000475935.5
ENST00000478204.5
ENST00000481886.5
ENST00000484656.5
CDS TCA 72 bp CCTACAGCTCACTGCCTTCCAAACACAGGTGCTCAATaGAGCCTTAAGCTAGTCCCACTGACACTGCAACCT +
Preference number: 6 (lower is better)
Translates to: PTAHCLPNTGAQ*SLKLVPLTLQP
Trigger: AGGTTGCAGTGTCAGTGGGACTAGCTTAAGGCTTCATTGAGCACCTGTGTTTGGAAGGCAGTGAGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS GCA 72 bp TTGGCGCAGATGATCTTACTGGCAGGGATTCCAATATaGTGGACCAACTCCATCTCTGCCAAACTCCGTCCT +
Preference number: 6 (lower is better)
Translates to: LAQMILLAGIPI*WTNSISAKLRP
Trigger: AGGACGGAGTTTGGCAGAGATGGAGTTGGTCCAGCATATTGGAATCCCTGCCAGTAAGATCATCTGCGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471119.5
ENST00000477570.5
ENST00000483027.5
CDS CAA 72 bp AAGCTCACCTTCTGCAGGATGGGGGTAGGGCAGATGTaGTCAAACAGGACTGAGTTGAAGATCCCATACACG +
Preference number: 6 (lower is better)
Translates to: KLTFCRMGVGQM*SNRTELKIPYT
Trigger: CGTGTATGGGATCTTCAACTCAGTCCTGTTTGACAACATCTGCCCTACCCCCATCCTGCAGAAGGTGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373440.6
CDS CAA 90 bp TCACACAGCAGCCACCTAACTGGTCATCTCTTTCTGCATCTGCCCTaGTCCTCAGTCTATACAGGAACTAGGGTGGTCTTTCCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SHSSHLTGHLFLHLP*SSVYTGTRVVFPKC
Trigger: GCACTTTGGAAAGACCACCCTAGTTCCTGTATAGACTGAGGACAAGGGCAGATGCAGAAAGAGATGACCAGTTAGGTGGCTGCTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp TTTTCCCACCTTCAAACCTTTGTTCCCACCATGTCCTaGAGAATACCCTCCCCACTCCTGTGTCTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: FSHLQTFVPTMS*RIPSPLLCLAK
Trigger: TTTTGCCAGACACAGGAGTGGGGAGGGTATTCTGCAGGACATGGTGGGAACAAAGGTTTGAAGGTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CAA 90 bp GCACATCCCTCACGTGGGACCAGCAGCCAACAGCTACTTGTCAAGTaGGATTACACAGAAGCAGAATCTCAAATCTCAAGTTTCCCTCGT +
Preference number: 6 (lower is better)
Translates to: AHPSRGTSSQQLLVK*DYTEAESQISSFPR
Trigger: ACGAGGGAAACTTGAGATTTGAGATTCTGCTTCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGAGGGATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 90 bp GGTGCCAAGCACATCCCTCACGTGGGACCAGCAGCCAACAGCTACTaGTCAAGTTGGATTACACAGAAGCAGAATCTCAAATCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: GAKHIPHVGPAANSY*SSWITQKQNLKSQV
Trigger: AACTTGAGATTTGAGATTCTGCTTCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGAGGGATGTGCTTGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp CCACTTGGTGCCAAACGTTATGCTAAGGGACAGAGATaGCCAAACAGTACTGTTGTTCTGAAGGAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: PLGAKRYAKGQR*PNSTVVLKELG
Trigger: CCCAAGCTCCTTCAGAACAACAGTACTGTTTGGTCATCTCTGTCCCTTAGCATAACGTTTGGCACCAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS GCA 72 bp TCTTTCCAAAGTGCAAATCAGACTGTGTTATGCCCCTaGTTCAAACTGGTCCATGCCTCCCACTGCTGTCAA +
Preference number: 6 (lower is better)
Translates to: SFQSANQTVLCP*FKLVHASHCCQ
Trigger: TTGACAGCAGTGGGAGGCATGGACCAGTTTGAAGCAGGGGCATAACACAGTCTGATTTGCACTTTGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 72 bp CACATCCCTCACGTGGGACCAGCAGCCAACAGCTACTaGTCAAGTTGGATTACACAGAAGCAGAATCTCAAA +
Preference number: 6 (lower is better)
Translates to: HIPHVGPAANSY*SSWITQKQNLK
Trigger: TTTGAGATTCTGCTTCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGAGGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 72 bp AGCCACCTAACTGGTCATCTCTTTCTGCATCTGCCCTaGTCCTCAGTCTATACAGGAACTAGGGTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: SHLTGHLFLHLP*SSVYTGTRVVF
Trigger: AAAGACCACCCTAGTTCCTGTATAGACTGAGGACAAGGGCAGATGCAGAAAGAGATGACCAGTTAGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 72 bp GTTGATCAATGGCTCCACTATCAGAGTTGTAAACAGTaGGCAATCTTGTTCCCACACCCAGTTGAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: VDQWLHYQSCKQ*AILFPHPVEPC
Trigger: GCAGGGCTCAACTGGGTGTGGGAACAAGATTGCCAACTGTTTACAACTCTGATAGTGGAGCCATTGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp CTAAGGGACAGAGATGACCAAACAGTACTGTTGTTCTaGAGGAGCTTGGGTCTGGAAGAAAAGGAACCCCTT +
Preference number: 6 (lower is better)
Translates to: LRDRDDQTVLLF*RSLGLEEKEPL
Trigger: AAGGGGTTCCTTTTCTTCCAGACCCAAGCTCCTTCAGAACAACAGTACTGTTTGGTCATCTCTGTCCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS GCA 72 bp CCGTATGCCCAAATGTCACTGCCTCTCCGAGTCAGTTaGTCCCTCTGTAAAATGGATGAATTGTTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: PYAQMSLPLRVS*SLCKMDELFWR
Trigger: TCTCCAAAACAATTCATCCATTTTACAGAGGGAGCAACTGACTCGGAGAGGCAGTGACATTTGGGCATACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS CCA 72 bp GGCATGGTAATAGCATCATTGGGCACACAGCATCATTaGGAAATGCAAATTGAGTCATTCAGCTCCGAAGGA +
Preference number: 6 (lower is better)
Translates to: GMVIASLGTQHH*EMQIESFSSEG
Trigger: TCCTTCGGAGCTGAATGACTCAATTTGCATTTCCCAATGATGCTGTGTGCCCAATGATGCTATTACCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp CACGTGGGACCAGCAGCCAACAGCTACTTGTCAAGTTaGATTACACAGAAGCAGAATCTCAAATCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: HVGPAANSYLSS*ITQKQNLKSQV
Trigger: AACTTGAGATTTGAGATTCTGCTTCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp TGTAGATGTGCTAAAGGCCAAACATGTATGAGGCTGTaGGTGAGACCACATTACTTAAATGTGGAAGGGACC +
Preference number: 6 (lower is better)
Translates to: CRCAKGQTCMRL*VRPHYLNVEGT
Trigger: GGTCCCTTCCACATTTAAGTAATGTGGTCTCACCCACAGCCTCATACATGTTTGGCCTTTAGCACATCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CAA 72 bp TCACGTGGGACCAGCAGCCAACAGCTACTTGTCAAGTaGGATTACACAGAAGCAGAATCTCAAATCTCAAGT +
Preference number: 6 (lower is better)
Translates to: SRGTSSQQLLVK*DYTEAESQISS
Trigger: ACTTGAGATTTGAGATTCTGCTTCTGTGTAATCCAACTTGACAAGTAGCTGTTGGCTGCTGGTCCCACGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp GATAAATTGAGCCCCTCTCTTGCAAATAGCAAGGATTaGGTACCAAATAAGCGAAAGGATAAGATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: DKLSPSLANSKD*VPNKRKDKMRA
Trigger: GGCCCTCATCTTATCCTTTCGCTTATTTGGTACGCAATCCTTGCTATTTGCAAGAGAGGGGCTCAATTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS GCA 72 bp CCTGTGTCTGGCAAAATCCTTAAAGTTTCACTCAAATaGCACCTTCCCCAAACCAATAAGGCAACTCTGCTT +
Preference number: 6 (lower is better)
Translates to: PVSGKILKVSLK*HLPQTNKATLL
Trigger: AAGCAGAGTTGCCTTATTGGTTTGGGGAAGGTGGCATTTGAGTGAAACTTTAAGGATTTTGCCAGACACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp CTTAAGTACTTACAAGTCCATTCAGCAGATGTTAGATaGCAGTTTCTACAAGGTGCAATGCAGGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: LKYLQVHSADVR*QFLQGAMQGHG
Trigger: TCCATGCCCCTGCATTGCACCTTGTAGAAACTGCCATCTAACATCTGCTGAATGGACTTGTAAGTACTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp ACCAAACAGTACTGTTGTTCTGAAGGAGCTTGGGTCTaGAAGAAAAGGAACCCCTTAAGTACTTACAAGTCC +
Preference number: 6 (lower is better)
Translates to: TKQYCCSEGAWV*KKRNPLSTYKS
Trigger: GGACTTGTAAGTACTTAAGGGGTTCCTTTTCTTCCAGACCCAAGCTCCTTCAGAACAACAGTACTGTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp GAGATGACCAAACAGTACTGTTGTTCTGAAGGAGCTTaGGTCTGGAAGAAAAGGAACCCCTTAAGTACTTAC +
Preference number: 6 (lower is better)
Translates to: EMTKQYCCSEGA*VWKKRNPLSTY
Trigger: GTAAGTACTTAAGGGGTTCCTTTTCTTCCAGACCCAAGCTCCTTCAGAACAACAGTACTGTTTGGTCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478204.5
ENST00000484656.5
CDS CCA 72 bp AAACTGCTTCTCCTCCTACATACCCATGTTGATCAATaGCTCCACTATCAGAGTTGTAAACAGTTGGCAATC +
Preference number: 6 (lower is better)
Translates to: KLLLLLHTHVDQ*LHYQSCKQLAI
Trigger: GATTGCCAACTGTTTACAACTCTGATAGTGGAGCCATTGATCAACATGGGTATGTAGGAGGAGAAGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 72 bp TCTCACTCGAAAGCCCACATTCATCATACCCCAGGCTaGGGACTTCAAATAAAATCATATCCCATTCTCTCA +
Preference number: 6 (lower is better)
Translates to: SHSKAHIHHTPG*GLQIKSYPILS
Trigger: TGAGAGAATGGGATATGATTTTATTTGAAGTCCCAAGCCTGGGGTATGATGAATGTGGGCTTTCGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CCA 72 bp GTCAGTTGCTCCCTCTGTAAAATGGATGAATTGTTTTaGAGAGCCTTCCCAGTTCTGAAATTCTGGATTTCA +
Preference number: 6 (lower is better)
Translates to: VSCSLCKMDELF*RAFPVLKFWIS
Trigger: TGAAATCCAGAATTTCAGAACTGGGAAGGCTCTCCAAAACAATTCATCCATTTTACAGAGGGAGCAACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484656.5
CDS CAA 72 bp CATCATTGGGCACACAGCATCATTGGGAAATGCAAATaGAGTCATTCAGCTCCGAAGGAGCATAATATATAC +
Preference number: 6 (lower is better)
Translates to: HHWAHSIIGKCK*SHSAPKEHNIY
Trigger: GTATATATTATGCTCCTTCGGAGCTGAATGACTCAATTTGCATTTCCCAATGATGCTGTGTGCCCAATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS CAA 72 bp ATGCCAGACATCATGCCAGGCACTTATATTATCTATTaGTATCTTCCCAAAAACCCCATGAGGGAGGCATTA +
Preference number: 6 (lower is better)
Translates to: MPDIMPGTYIIY*YLPKNPMREAL
Trigger: TAATGCCTCCCTCATGGGGTTTTTGGGAAGATACAAATAGATAATATAAGTGCCTGGCATGATGTCTGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5
CDS TCA 72 bp ATCATTGGGCACACAGCATCATTGGGAAATGCAAATTaGGTCATTCAGCTCCGAAGGAGCATAATATATACT +
Preference number: 6 (lower is better)
Translates to: IIGHTASLGNAN*VIQLRRSIIYT
Trigger: AGTATATATTATGCTCCTTCGGAGCTGAATGACTCAATTTGCATTTCCCAATGATGCTGTGTGCCCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475935.5
ENST00000484656.5