RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AXIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000168646

Ensembl transcript IDs: ENST00000307078.10, ENST00000375702.5, ENST00000544103.2, ENST00000577278.1, ENST00000578251.1, ENST00000580513.1, ENST00000585045.1, ENST00000611991.1, ENST00000618960.4

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCAGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTaGCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCCA +
Preference number: 1 (lower is better)
Translates to: PQSQDQPGARRSRVP*LSLCNRSSHPTQPP
Trigger: TGGGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR CAA 90 bp CTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCCAAAATGTaGATGATGACGCAACATGGTCAACCCTCAAGACCTTTAAGACAA +
Preference number: 2 (lower is better)
Translates to: LPLQQIIPSNTTPKM*MMTQHGQPSRPLRQ
Trigger: TTGTCTTAAAGGTCTTGAGGGTTGACCATGTTGCGTCATCATCAACATTTTGGGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR GCA 72 bp GGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTaGAACAGATCATCCCATCCAACACAACCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: GARRSRVPCLSL*NRSSHPTQPPK
Trigger: TTTTGGGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR GCA 72 bp CAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTaGCTCTCCCTCTGCAACAGATCATCCCATCCAACA +
Preference number: 3 (lower is better)
Translates to: QDQPGARRSRVP*LSLCNRSSHPT
Trigger: TGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR-3UTR CAA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAATTCCTTCAAAATGTTTaGTCGCAGTTGCTCACAGCC +
Preference number: 3 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQFLQNV*SQLLTA
Trigger: GGCTGTGAGCAACTGCGACAAAACATTTTGAAGGAA...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR-3UTR CAA 90 bp AGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTACAACCCCCAAAATGTaGATGATGACGCAACATGGT +
Preference number: 3 (lower is better)
Translates to: SHRINLGPEGAGFPASPSTTPKM*MMTQHG
Trigger: ACCATGTTGCGTCATCATCAACATTTTGGGGGTTGT...AGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR-3UTR CAA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCACAGTCTGTCTTCACTaGGAGGGACGTAGTGCAAAG +
Preference number: 3 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVTVCLH*EGRSAK
Trigger: CTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGT...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR-3UTR CAA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAAAATGTTTTGTCGCAGTaGCTCACAGCCAAGACAGTT +
Preference number: 3 (lower is better)
Translates to: AKHNSSVSEETMNALLAQNVLSQ*LTAKTV
Trigger: AACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR-3UTR CAA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGAATGTTTTGTCGCAGTaGCTCACAGCCAAGACAGTT +
Preference number: 3 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWNVLSQ*LTAKTV
Trigger: AACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAACCAGGGCAGAAGCAGTaGACCCGCTGCGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQPGQKQ*TRCVAS
Trigger: GGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGG...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCAGGGGAATCCGGAGATaGCCGCCCCTCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPRGIRR*PPLRLP
Trigger: GGGGAGCCGGAGGGGCGGGCATCTCCGGATTCCCCT...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAAGCCACACAGCACCGCTaGTTTGGGGGCTTCGACACC +
Preference number: 4 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQATQHR*FGGFDT
Trigger: GGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTGTGGC...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAACCTGGGATGGGTTTGGTGACCTaGCCCTTGCCCACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLGRLHEGEPQSQDQPGMGLVT*PLPTPG
Trigger: GCCAGGGGTGGGCAAGGGCCAGGTCACCAAACCCAT...CCCAGGTTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCGCTGGCTCGTTCGCCTaGAGACGAGCGGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: STWGPKEQGSLPLPLQQIAGSFA*RRAGRL
Trigger: GAGTCTGCCCGCTCGTCTCCAGGCGAACGAGCCAGC...GATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAAGGCTTGGGCTTGCTCTaGCGCTCACTCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQGLGLL*RSLSSI
Trigger: GATGCTGGAGAGTGAGCGGCAGAGCAAGCCCAAGCC...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCGCCCTTGCCCACCCCTaGCTGACACGGTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPALAHP*LTRWGL
Trigger: GAGACCCCACCGTGTCAGCCAGGGGTGGGCAAGGGC...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCAGAGGGGGTGCTGCGTaGGCGCCCCCTCCCGCGAAT +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGRGGAA*APPPAN
Trigger: ATTCGCGGGAGGGGGCGCCCACGCAGCACCCCCTCT...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCAGAGGGGGTGCTGCGTaGGCGCCCCCTCCCGCGAAT +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPRGGAA*APPPAN
Trigger: ATTCGCGGGAGGGGGCGCCCACGCAGCACCCCCTCT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAACCTGGGACTGCTCGCTGGGCATaGTTTCCGGAGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LGLGRLHEGEPQSQDQPGTARWA*FPEPWS
Trigger: ACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGT...CCCAGGTTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCGGCATCGCAGGGTCCTaGGTGAACAGGTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPGIAGS*VNRWAR
Trigger: CCGTGCCCACCTGTTCACCCAGGACCCTGCGATGCC...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAAGCCAGCGTGTTGGGTaGGGTCAGGGGAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRASQRVG*GQGRHR
Trigger: GCGATGCCTCCCCTGACCCCACCCAACACGCTGGCT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGAGCCAGGCTTGGATTaGAGAAGGGTGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SHRINLGPEGAGFPASPSEPGLD*RRVWLP
Trigger: CGGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTC...AGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCCTCACGGAAGCTGCTaGTGGGGTCCGGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGPHGSC*WGPGGK
Trigger: CTTGCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGG...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCCATCCTCACGGAAGCTaGTGCTGGGGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGHPHGS*CWGPGG
Trigger: GCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGGATG...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACAGGGGAATCCGGAGATaGCCGCCCCTCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHRGIRR*PPLRLP
Trigger: GGGGAGCCGGAGGGGCGGGCATCTCCGGATTCCCCT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGGGGAATCCGGAGATaGCCGCCCCTCCGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKARGIRR*PPLRLP
Trigger: GGGGAGCCGGAGGGGCGGGCATCTCCGGATTCCCCT...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCCCTTGCCCACCCCTaGCTGACACGGTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRALAHP*LTRWGL
Trigger: GAGACCCCACCGTGTCAGCCAGGGGTGGGCAAGGGC...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAGAGGGGGTGCTGCGTaGGCGCCCCCTCCCGCGAAT +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTRGGAA*APPPAN
Trigger: ATTCGCGGGAGGGGGCGCCCACGCAGCACCCCCTCT...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCTGGCCCTCAGAGTTTTaGTGGACAAGCCAACCACGG +
Preference number: 4 (lower is better)
Translates to: STWGPKEQGSLPLPLQQIWPSEF*WTSQPR
Trigger: CCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCA...GATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCCAGGGCAGAAGCAGTaGACCCGCTGCGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHPGQKQ*TRCVAS
Trigger: GGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGG...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCCAGGGCAGAAGCAGTaGACCCGCTGCGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSPGQKQ*TRCVAS
Trigger: GGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGG...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCGTTGGCGCTGGTGGCTaGTGCAAAGACATAGCCAGA +
Preference number: 4 (lower is better)
Translates to: STWGPKEQGSLPLPLQQIVGAGG*CKDIAR
Trigger: TCTGGCTATGTCTTTGCACCAGCCACCAGCGCCAAC...GATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCATAGCGGCCTACGCCTaGAGACTGGCAGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGIAAYA*RLAARG
Trigger: ACCCCTGGCTGCCAGTCTCCAGGCGTAGGCCGCTAT...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTGGCTCGTTCGCCTaGAGACGAGCGGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRAGSFA*RRAGRL
Trigger: GAGTCTGCCCGCTCGTCTCCAGGCGAACGAGCCAGC...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCACAGATGGTGCCGGCTaGCTCGTTCGCCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGTDGAG*LVRLET
Trigger: CGTCTCCAGGCGAACGAGCCAGCCGGCACCATCTGT...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGGCATCGCAGGGTCCTaGGTGAACAGGTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRGIAGS*VNRWAR
Trigger: CCGTGCCCACCTGTTCACCCAGGACCCTGCGATGCC...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCTCAGGGCCCTGGGCCTaGGGAGGCTACATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFSGPWA*GGYMRG
Trigger: CCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCTGA...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp TCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCCTCTCGGGCTGTTACTaGGTTGCCAGGACCTTATCA +
Preference number: 4 (lower is better)
Translates to: STWGPKEQGSLPLPLQQILSGCY*VARTLS
Trigger: TGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAG...GATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp AGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTCAGCAGGGGCTCATCTaGACCTCCTCTCTTTTACAG +
Preference number: 4 (lower is better)
Translates to: SHRINLGPEGAGFPASPSQQGLI*TSSLLQ
Trigger: CTGTAAAAGAGAGGAGGTTCAGATGAGCCCCTGCTG...AGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp CTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAACCTGGGGGGAGCTCTTCCCACTaGGTCTGGGAATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGLGRLHEGEPQSQDQPGGSSSH*VWEFFF
Trigger: GAAGAAAAATTCCCAGACTCAGTGGGAAGAGCTCCC...CCCAGGTTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTCCTCACGGAAGCTGCTaGTGGGGTCCGGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSPHGSC*WGPGGK
Trigger: CTTGCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGG...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCATCCTCACGGAAGCTaGTGCTGGGGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQHPHGS*CWGPGG
Trigger: GCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGGATG...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCATCCTCACGGAAGCTaGTGCTGGGGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDHPHGS*CWGPGG
Trigger: GCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGGATG...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCTCCTCTCGGATCTGCTaGAGGCGCTCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPSSRIC*RRSSRL
Trigger: CAGCCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGA...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGTCATCCTCTCGGATCTaGTGCAGGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGSSSRI*CRRSSR
Trigger: CCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGATGA...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGGGTCTTCCTCGTAGCTaGCGGAGGGCAGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGGLPRS*RRAVGR
Trigger: TCTCCCTACTGCCCTCCGGCAGCTACGAGGAAGACC...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGTGGTCACAAAGCCTTTaGCCCCGAGGAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRWSQSL*PRGGGR
Trigger: CCTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCA...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAAGCAGTGCACCCGCTaGGTGGCCTCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAKQCTR*VASASI
Trigger: GATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTT...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCAAGCAGTGCACCCGCTaGGTGGCCTCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFKQCTR*VASASI
Trigger: GATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTT...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCACACCTCAGCTAGCCTaGGACAGGCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGTPQLA*DRPPPA
Trigger: AGCTGGAGGAGGCCTGTCGCAGGCTAGCTGAGGTGT...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAAGGAGCAGGGTTCCCTaGCTCTCCCTCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRARSRVP*LSLCNR
Trigger: TCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAGCCCTTGCCCACCCCTaGCTGACACGGTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPALAHP*LTRWGL
Trigger: GAGACCCCACCGTGTCAGCCAGGGGTGGGCAAGGGC...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAAGGAGTGTAAGGACTTaGTCCACCGGGTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRARSVRT*STGSEG
Trigger: CCCCTCTGACCCGGTGGACCAAGTCCTTACACTCCT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGAGACACTTGGCCATTaGCCTTCACACTGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SHRINLGPEGAGFPASPSETLGH*PSHCDA
Trigger: TGCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTC...AGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCGGGGGTCATCTCCTTaGGCAGGCGGTGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDRGSSP*AGGGFS
Trigger: CGAGAACCCACCGCCTGCCCAAGGAGATGACCCCCG...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACGGGGGTCATCTCCTTaGGCAGGCGGTGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSRGSSP*AGGGFS
Trigger: CGAGAACCCACCGCCTGCCCAAGGAGATGACCCCCG...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCGCTCCTCCAGGCTGTaGCGGCTCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDRSSRL*RLSNSS
Trigger: GCTGGAGTTGGAGAGCCGCCACAGCCTGGAGGAGCG...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCCGCTCCTCCAGGCTGTaGCGGCTCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTRSSRL*RLSNSS
Trigger: GCTGGAGTTGGAGAGCCGCCACAGCCTGGAGGAGCG...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGAATGGTGGTGGTGGTaGTGGTCCGGGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQEWWWW*WSGERE
Trigger: CTCCCGCTCCCCGGACCACCACCACCACCACCATTC...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCATGCGAATGGTGGTGGTaGTGGTGGTCCGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSCEWWW*WWSGER
Trigger: CCGCTCCCCGGACCACCACCACCACCACCATTCGCA...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCAGTGCACCCGCTGCGTaGCCTCCGCCTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFSAPAA*PPPRSP
Trigger: AGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACT...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCGGCATCGCAGGGTCCTaGGTGAACAGGTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFGIAGS*VNRWAR
Trigger: CCGTGCCCACCTGTTCACCCAGGACCCTGCGATGCC...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACAGCCAGCGTGTTGGGTaGGGTCAGGGGAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHSQRVG*GQGRHR
Trigger: GCGATGCCTCCCCTGACCCCACCCAACACGCTGGCT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTAGCCAGCGTGTTGGGTaGGGTCAGGGGAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVSQRVG*GQGRHR
Trigger: GCGATGCCTCCCCTGACCCCACCCAACACGCTGGCT...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGGAGCCAGGCTTGGATTaGAGAAGGGTGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGEPGLD*RRVWLP
Trigger: CGGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTC...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACCAACTCACTGGCCTaGAGCGCGTGGACACCTGCC +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPTNSLA*SAWTPA
Trigger: GGCAGGTGTCCACGCGCTCCAGGCCAGTGAGTTGGT...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACATCAGGGCCCTGGGCCTaGGGAGGCTACATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTSGPWA*GGYMRG
Trigger: CCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCTGA...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACAGGCATGGGTTTGGTaGCCTGGCCCTTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARQAWVW*PGPCPP
Trigger: GGGTGGGCAAGGGCCAGGTCACCAAACCCATGCCTG...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACCCAGGGTCAAGCTCTaGGCCTTCAGCATCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPPRVKL*AFSILR
Trigger: CCGGAGGATGCTGAAGGCTCAGAGCTTGACCCTGGG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCCAGGGTCAAGCTCTaGGCCTTCAGCATCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSPRVKL*AFSILR
Trigger: CCGGAGGATGCTGAAGGCTCAGAGCTTGACCCTGGG...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCTCCTCTCGGATCTGCTaGAGGCGCTCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFSSRIC*RRSSRL
Trigger: CAGCCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGA...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACTCCTCTCGGATCTGCTaGAGGCGCTCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHSSRIC*RRSSRL
Trigger: CAGCCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGA...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTGGTCACAAAGCCTTTaGCCCCGAGGAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSWSQSL*PRGGGR
Trigger: CCTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCA...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAAAAGCAGTGCACCCGCTaGGTGGCCTCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQKQCTR*VASASI
Trigger: GATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTT...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCACTGCCAGACATCCTaGGACCTGTCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGHCQTS*DLSPSS
Trigger: GGAGGAAGGAGACAGGTCGCAGGATGTCTGGCAGTG...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACGCCACACAGCACCGCTaGTTTGGGGGCTTCGACACC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHATQHR*FGGFDT
Trigger: GGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTGTGGC...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGAGGAGCAGGGTTCCCTaGCTCTCCCTCTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGRSRVP*LSLCNR
Trigger: TCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCT...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCCCCTGGCTGACACGGTaGGGTCTCCCCTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSPWLTR*GLPFFP
Trigger: GGGGAAGAAGGGGAGACCCCACCGTGTCAGCCAGGG...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATGGGTTTGGTGACCTaGCCCTTGCCCACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTMGLVT*PLPTPG
Trigger: GCCAGGGGTGGGCAAGGGCCAGGTCACCAAACCCAT...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCCGTTCCGCCTGGTGTTaGAAGAGACAGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPRSAWC*KRQAWV
Trigger: AACCCATGCCTGTCTCTTCCAACACCAGGCGGAACG...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGACCTCACACTCGCCGTaGCCCTCAGAGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGTSHSP*PSEFCW
Trigger: CCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGT...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACGCTCCTCCAGGCTGTaGCGGCTCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPRSSRL*RLSNSS
Trigger: GCTGGAGTTGGAGAGCCGCCACAGCCTGGAGGAGCG...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTATAGCGGCCTACGCCTaGAGACTGGCAGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSIAAYA*RLAARG
Trigger: ACCCCTGGCTGCCAGTCTCCAGGCGTAGGCCGCTAT...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCTGCGAATGGTGGTGGTaGTGGTGGTCCGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSCEWWW*WWSGER
Trigger: CCGCTCCCCGGACCACCACCACCACCACCATTCGCA...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCATGCGAATGGTGGTGGTaGTGGTGGTCCGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPCEWWW*WWSGER
Trigger: CCGCTCCCCGGACCACCACCACCACCACCATTCGCA...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCGGGAGCAGGGAGTaGTACTGCGAATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQGGSRE*YCEWWW
Trigger: CCACCACCATTCGCAGTACCACTCCCTGCTCCCGCC...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGGCGGGAGCAGGGAGTaGTACTGCGAATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTGGSRE*YCEWWW
Trigger: CCACCACCATTCGCAGTACCACTCCCTGCTCCCGCC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAAGTGCACCCGCTGCGTaGCCTCCGCCTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPSAPAA*PPPRSP
Trigger: AGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACT...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACACAGATGGTGCCGGCTaGCTCGTTCGCCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHTDGAG*LVRLET
Trigger: CGTCTCCAGGCGAACGAGCCAGCCGGCACCATCTGT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACAGATGGTGCCGGCTaGCTCGTTCGCCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQTDGAG*LVRLET
Trigger: CGTCTCCAGGCGAACGAGCCAGCCGGCACCATCTGT...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCACAGCACCGCTGCTTTaGGGGCTTCGACACCTCAGC +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPTAPLL*GLRHLS
Trigger: GCTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACACCAACTCACTGGCCTaGAGCGCGTGGACACCTGCC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHTNSLA*SAWTPA
Trigger: GGCAGGTGTCCACGCGCTCCAGGCCAGTGAGTTGGT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACCCCAGGGTCAAGCTCTaGGCCTTCAGCATCCTCCGG +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNPRVKL*AFSILR
Trigger: CCGGAGGATGCTGAAGGCTCAGAGCTTGACCCTGGG...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAGACACACGGAGCGGGTaGCCGTGCAGGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPDTRSG*PCRYRY
Trigger: GTACCTGTACCTGCACGGTCACCCGCTCCGTGTGTC...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCATCCTCTCGGATCTaGTGCAGGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSSSSRI*CRRSSR
Trigger: CCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGATGA...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGCAAGGTACTGCCTCTaGTGCCGCCAAACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTARYCL*CRQTAR
Trigger: GCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACACACCTCAGCTAGCCTaGGACAGGCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDTPQLA*DRPPPA
Trigger: AGCTGGAGGAGGCCTGTCGCAGGCTAGCTGAGGTGT...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGCCACACAGCACCGCTaGTTTGGGGGCTTCGACACC +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARATQHR*FGGFDT
Trigger: GGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTGTGGC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTGTCATTTCCACGAAAGCACAGCGGCAGTGATTCTAGCAGGCCTCAGGGCCCTGTGGAGGAAAGGTGCTaGTGGGTCTCCCTACAACTG +
Preference number: 4 (lower is better)
Translates to: LSFPRKHSGSDSSRPQGPVEERC*WVSLQL
Trigger: CAGTTGTAGGGAGACCCAGCAGCACCTTTCCTCCAC...AGGGCCCTGAGGCCTGCTAGAATCACTGCCGCTGTGCTTTCGTGGAAATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCCACGGAAGCTGCTGCTaGGGTCCGGGAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSHGSCC*GPGGKS
Trigger: TGACTTGCCTCCCGGACCCCAGCAGCAGCTTCCGTG...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCAGGAGTGTAAGGACTTaGTCCACCGGGTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPRSVRT*STGSEG
Trigger: CCCCTCTGACCCGGTGGACCAAGTCCTTACACTCCT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACTCCTCCATCACCGACTaGATCTCGGTCTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHSSITD*ISVCAW
Trigger: CCAGGCGCAGACCGAGATCCAGTCGGTGATGGAGGA...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCACCTCACACTCGCCGTaGCCCTCAGAGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPTSHSP*PSEFCW
Trigger: CCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAGCTCAGCTGCAAAGGTaGCGGGTTCCACGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPAQLQR*RVPRGS
Trigger: TGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGC...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAATAGCGGCCTACGCCTaGAGACTGGCAGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARIAAYA*RLAARG
Trigger: ACCCCTGGCTGCCAGTCTCCAGGCGTAGGCCGCTAT...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACTACTGCGAATGGTGGTaGTGGTGGTGGTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDYCEWW*WWWSGE
Trigger: CTCCCCGGACCACCACCACCACCACCATTCGCAGTA...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGGCGGGAGCAGGGAGTaGTACTGCGAATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPGGSRE*YCEWWW
Trigger: CCACCACCATTCGCAGTACCACTCCCTGCTCCCGCC...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACGCTTCGTCGTCTGCTTaGTCACAAAGCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GAGFPASPSATDHPIQHNASSSA*SQSLCP
Trigger: GGGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGC...GTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCGCCAAACTGCTCGCTaGGCATGGTTTCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQRQTAR*AWFPEP
Trigger: AGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGCG...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAGGGCACTATGGGGCTTaGGCTTGCTCTGCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPGHYGA*ACSAAH
Trigger: GTGAGCGGCAGAGCAAGCCCAAGCCCCATAGTGCCC...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCACAGCACCGCTGCTTTaGGGGCTTCGACACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKATAPLL*GLRHLS
Trigger: GCTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGT...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCAACAGCACCGCTGCTTTaGGGGCTTCGACACCTCAGC +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSTAPLL*GLRHLS
Trigger: GCTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGT...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCAGAGCCAGGCTTGGATTaGAGAAGGGTGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSEPGLD*RRVWLP
Trigger: CGGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTC...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGTCACAGGATCAACCTaGGGCCCGAAGGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPVTGST*GPKEQG
Trigger: ACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGAC...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGCACCAAACTGCTCGCTaGGCATGGTTTCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRHQTAR*AWFPEP
Trigger: AGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGTG...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAGCGAAAGTTTGCACTTaGAGTCGGCACAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRAAKVCT*SRHKST
Trigger: AGTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGC...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCGCGAAAGTTTGCACTTaGAGTCGGCACAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPAKVCT*SRHKST
Trigger: AGTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGC...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGGTGGCAGGCTTCAGCTaGTTGGAGACAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGVAGFS*LETMLL
Trigger: CAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCAC...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGGCGCTGGTGGCTGGTaGAAAGACATAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAGAGGW*KDIART
Trigger: GGTTCTGGCTATGTCTTTGCACCAGCCACCAGCGCC...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCGCCTTCACACTGCGATaGATTTCTCTCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGFPASPSATDHPIQHNPAFTLR*ISLWSC
Trigger: ACAGCTCCAGAGAGAAATGCATCGCAGTGTGAAGGC...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAATCATCCTCTCGGATCTaGTGCAGGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQSSSRI*CRRSSR
Trigger: CCTGGAGGAGCGCCTGCAGCAGATCCGAGAGGATGA...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCGGTCTTCCTCGTAGCTaGCGGAGGGCAGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSGLPRS*RRAVGR
Trigger: TCTCCCTACTGCCCTCCGGCAGCTACGAGGAAGACC...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGCAGTAATACTCGCTaGCCCCAGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPSSNTR*PQGRSS
Trigger: ACTGCTTCTGCCCTGGGGGCAGCGAGTATTACTGCT...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCTCCTCCCGGGGAAGCTaGAGGGCCCCAGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVSSRGS*RAPAPP
Trigger: CGGCGGAGCTGGGGCCCTGCAGCTTCCCCGGGAGGA...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACACACCTCAGCTAGCCTaGGACAGGCCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNTPQLA*DRPPPA
Trigger: AGCTGGAGGAGGCCTGTCGCAGGCTAGCTGAGGTGT...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCGAGCGCGTGGACACCTaGCAGTTTCTTTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGERVDT*QFLWLF
Trigger: AAAGAGCCAAAGAAACTGGCAGGTGTCCACGCGCTC...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGCGATCCGCTCCACTTTaGCCAGAATCCGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRRSAPL*PESGLH
Trigger: ATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCG...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCATCTCAGCAATCGGCGTaGTCTCTCTGTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRASQQSA*SLCLSQ
Trigger: TTGAGAGAGACAGAGAGACCACGCCGATTGCTGAGA...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTAGGAGTGTAAGGACTTaGTCCACCGGGTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVRSVRT*STGSEG
Trigger: CCCCTCTGACCCGGTGGACCAAGTCCTTACACTCCT...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAATCCTCCATCACCGACTaGATCTCGGTCTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQSSITD*ISVCAW
Trigger: CCAGGCGCAGACCGAGATCCAGTCGGTGATGGAGGA...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATACTGCGAATGGTGGTaGTGGTGGTGGTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPYCEWW*WWWSGE
Trigger: CTCCCCGGACCACCACCACCACCACCATTCGCAGTA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCTACTGCGAATGGTGGTaGTGGTGGTGGTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSYCEWW*WWWSGE
Trigger: CTCCCCGGACCACCACCACCACCACCATTCGCAGTA...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAATGGTACTGCGAATGGTaGTGGTGGTGGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQWYCEW*WWWWSG
Trigger: CCCGGACCACCACCACCACCACCATTCGCAGTACCA...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATGGTACTGCGAATGGTaGTGGTGGTGGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPWYCEW*WWWWSG
Trigger: CCCGGACCACCACCACCACCACCATTCGCAGTACCA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTTCTCCTCCTTGGTCTTaGGGACGGCATGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVSPPWS*GRHGGG
Trigger: TCCACCACCATGCCGTCCCCAAGACCAAGGAGGAGA...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCCTCGATCTCCTCCTTaGTCTTGGGGACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSPRSPP*SWGRHG
Trigger: ACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGG...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAACTGCTCGCTGGGCATaGTTTCCGGAGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPTARWA*FPEPWS
Trigger: ACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGT...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCGATTGGAGAAGGGTGTaGCTCCCGTCTGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPDWRRV*LPSEQW
Trigger: CCACTGTTCAGACGGGAGCCACACCCTTCTCCAATC...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGCTGGCCTGGAGCGCGTaGACACCTGCCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQLAWSA*TPASFF
Trigger: AAAGAAACTGGCAGGTGTCCACGCGCTCCAGGCCAG...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCTGGCCTGGAGCGCGTaGACACCTGCCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQLAWSA*TPASFF
Trigger: AAAGAAACTGGCAGGTGTCCACGCGCTCCAGGCCAG...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAGTCACAGGATCAACCTaGGGCCCGAAGGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPVTGST*GPKEQG
Trigger: ACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGAC...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACACCAAACTGCTCGCTaGGCATGGTTTCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPHQTAR*AWFPEP
Trigger: AGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGTG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGGGGAGCTCTTCCCACTaGGTCTGGGAATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGGSSSH*VWEFFF
Trigger: GAAGAAAAATTCCCAGACTCAGTGGGAAGAGCTCCC...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTCAGGTTCATCTGCCTaGATCCATTGCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGSGSSA*IHCRQT
Trigger: GGTTTGCCTGCAATGGATTCAGGCAGATGAACCTGA...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTTATGTAGGTCTTGGTaGCAGGCTTCAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGLCRSW*QASAAW
Trigger: CCAAGCAGCTGAAGCCTGCCACCAAGACCTACATAA...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCACTTCTTCATTCAAGGTaGGGAGATAGCCACACACGA +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRALLHSR*GDSHTR
Trigger: TCGTGTGTGGCTATCTCCCCACCTTGAATGAAGAAG...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACGTTGGCGCTGGTGGCTaGTGCAAAGACATAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHVGAGG*CKDIAR
Trigger: TCTGGCTATGTCTTTGCACCAGCCACCAGCGCCAAC...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCGTTGGCGCTGGTGGCTaGTGCAAAGACATAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSVGAGG*CKDIAR
Trigger: TCTGGCTATGTCTTTGCACCAGCCACCAGCGCCAAC...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCTGTCGTTGGCGCTGGTaGCTGGTGCAAAGACATAGC +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKACRWRW*LVQRHS
Trigger: GCTATGTCTTTGCACCAGCCACCAGCGCCAACGACA...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCGAGACACTTGGCCATTaGCCTTCACACTGCGATGCA +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPETLGH*PSHCDA
Trigger: TGCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTC...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAATCTCCTCCTTGGTCTTaGGGACGGCATGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQSPPWS*GRHGGG
Trigger: TCCACCACCATGCCGTCCCCAAGACCAAGGAGGAGA...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACTCTCCTCCTTGGTCTTaGGGACGGCATGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNSPPWS*GRHGGG
Trigger: TCCACCACCATGCCGTCCCCAAGACCAAGGAGGAGA...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCACCTCGATCTCCTCCTTaGTCTTGGGGACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPPRSPP*SWGRHG
Trigger: ACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGG...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACCTCGATCTCCTCCTTaGTCTTGGGGACGGCATGGT +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPPRSPP*SWGRHG
Trigger: ACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGG...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCTCCCGTCTGAACAGTaGCCGAATGATTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHLPSEQ*PNDSCP
Trigger: GGGACAGGAATCATTCGGCCACTGTTCAGACGGGAG...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTGATTGGAGAAGGGTGTaGCTCCCGTCTGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSDWRRV*LPSEQW
Trigger: CCACTGTTCAGACGGGAGCCACACCCTTCTCCAATC...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGTTCTGGAGCCAGGCTTaGATTGGAGAAGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQFWSQA*IGEGCG
Trigger: GCCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAA...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCACTGGCCTGGAGCGCGTaGACACCTGCCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPLAWSA*TPASFF
Trigger: AAAGAAACTGGCAGGTGTCCACGCGCTCCAGGCCAG...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCTCTCGGGCTGTTACTaGGTTGCCAGGACCTTATCA +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVLSGCY*VARTLS
Trigger: TGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAG...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCATGGGTTCTCGGGAAATaGGGTAGAGACACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSWVLGK*GRDTWP
Trigger: TGGCCAAGTGTCTCTACCTCATTTCCCGAGAACCCA...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACGTGGCAGGCTTCAGCTaGTTGGAGACAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDVAGFS*LETMLL
Trigger: CAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCAC...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACATGGCCCTCAGAGTTTTaGTGGACAAGCCAACCACGG +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTWPSEF*WTSQPR
Trigger: CCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCA...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCGGCGCTGGTGGCTGGTaGAAAGACATAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: NVLSQLLTAKTVHKSFGLGAGGW*KDIART
Trigger: GGTTCTGGCTATGTCTTTGCACCAGCCACCAGCGCC...GAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGGCGCTGGTGGCTGGTaGAAAGACATAGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKGAGGW*KDIART
Trigger: GGTTCTGGCTATGTCTTTGCACCAGCCACCAGCGCC...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCGCCTTCACACTGCGATaGATTTCTCTCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPAFTLR*ISLWSC
Trigger: ACAGCTCCAGAGAGAAATGCATCGCAGTGTGAAGGC...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGAGCAGTAATACTCGCTaGCCCCAGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKSSNTR*PQGRSS
Trigger: ACTGCTTCTGCCCTGGGGGCAGCGAGTATTACTGCT...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGTGCCTTTCCCATTaGGTTTGGGCAAGGTACTGC +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKPCLSH*VWARYC
Trigger: GCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGG...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAATATGGGGCTTGGGCTTaGTCTGCCGCTCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKYGAWA*SAAHSP
Trigger: TGGAGAGTGAGCGGCAGAGCAAGCCCAAGCCCCATA...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCCGATCCGCTCCACTTTaGCCAGAATCCGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSRSAPL*PESGLH
Trigger: ATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCG...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAATGTTTTGTCGCAGTTaGTCACAGCCAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: RESLSPQYRATHGAGDRAMFCRS*SQPRQF
Trigger: GAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAACCCTGCCTCTCCCTCTaGAACAGATCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQPCLSL*NRSSHP
Trigger: TGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGG...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACTGTGTGGAGGAAAGGTaGTGCTGGGTCTCCCTACAA +
Preference number: 4 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDCVEER*CWVSLQ
Trigger: TTGTAGGGAGACCCAGCAGCACCTTTCCTCCACACA...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCGTTCCGCCTGGTGTTaGAAGAGACAGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKRSAWC*KRQAWV
Trigger: AACCCATGCCTGTCTCTTCCAACACCAGGCGGAACG...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACGTTCCGCCTGGTGTTaGAAGAGACAGGCATGGGTT +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARRSAWC*KRQAWV
Trigger: AACCCATGCCTGTCTCTTCCAACACCAGGCGGAACG...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATCTTCGTTCCGCCTaGTGTTGGAAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHHLRSA*CWKRQA
Trigger: TGCCTGTCTCTTCCAACACCAGGCGGAACGAAGATG...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTCCCTCAGAGTTTTGCTaGACAAGCCAACCACGGTTG +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSPSEFC*TSQPRL
Trigger: CAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGG...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCCCTCAGAGTTTTGCTaGACAAGCCAACCACGGTTG +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSPSEFC*TSQPRL
Trigger: CAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGG...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATGTCAACAGTTTCCGTaGACCTCACACTCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPCQQFP*TSHSPW
Trigger: CCACGGCGAGTGTGAGGTCCACGGAAACTGTTGACA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGTGTCAACAGTTTCCGTaGACCTCACACTCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKCQQFP*TSHSPW
Trigger: CCACGGCGAGTGTGAGGTCCACGGAAACTGTTGACA...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACTGTCGTTGGCGCTGGTaGCTGGTGCAAAGACATAGC +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNCRWRW*LVQRHS
Trigger: GCTATGTCTTTGCACCAGCCACCAGCGCCAACGACA...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAATGTCGTTGGCGCTGGTaGCTGGTGCAAAGACATAGC +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQCRWRW*LVQRHS
Trigger: GCTATGTCTTTGCACCAGCCACCAGCGCCAACGACA...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCCGTCAGCGCATCACTaGATATCTCACTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVPSAHH*ISHCRW
Trigger: CCAACGACAGTGAGATATCCAGTGATGCGCTGACGG...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCTGTCCGTCATGGACATaGAATCATCCGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPCPSWT*NHPSAH
Trigger: ATGCGCTGACGGATGATTCCATGTCCATGACGGACA...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGCTTCGTCGTCTGCTTaGTCACAAAGCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTASSSA*SQSLCP
Trigger: GGGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGC...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAGCTTCGTCGTCTGCTTaGTCACAAAGCCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPASSSA*SQSLCP
Trigger: GGGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGC...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAGATTGGAGAAGGGTGTaGCTCCCGTCTGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPDWRRV*LPSEQW
Trigger: CCACTGTTCAGACGGGAGCCACACCCTTCTCCAATC...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATTCTGGAGCCAGGCTTaGATTGGAGAAGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPFWSQA*IGEGCG
Trigger: GCCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACAGGCATGGGTTTGGTaGCCTGGCCCTTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: AKHNSSVSEETMNALLAQQAWVW*PGPCPP
Trigger: GGGTGGGCAAGGGCCAGGTCACCAAACCCATGCCTG...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCATCAGGTTCATCTGCCTaGATCCATTGCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPSGSSA*IHCRQT
Trigger: GGTTTGCCTGCAATGGATTCAGGCAGATGAACCTGA...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCTCAGGTTCATCTGCCTaGATCCATTGCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSSGSSA*IHCRQT
Trigger: GGTTTGCCTGCAATGGATTCAGGCAGATGAACCTGA...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp AGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCGCGAAAGTTTGCACTTaGAGTCGGCACAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: SQDSSQELRAPTVHQSQTAKVCT*SRHKST
Trigger: AGTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGC...GGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACCAGGATCGCTCCTCTTaGAGGACCTGTATCCACTGT +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNQDRSS*RTCIHC
Trigger: ACAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTG...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCAGGATCGCTCCTCTTaGAGGACCTGTATCCACTGT +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKQDRSS*RTCIHC
Trigger: ACAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTG...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGATGGGTTCTCGGGAAATaGGGTAGAGACACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARWVLGK*GRDTWP
Trigger: TGGCCAAGTGTCTCTACCTCATTTCCCGAGAACCCA...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGGGCTGTTACTGAGTTaGCAGGACCTTATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTGLLLS*QDLIKA
Trigger: CGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGGGCTGTTACTGAGTTaGCAGGACCTTATCAAAGCG +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAGLLLS*QDLIKA
Trigger: CGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCC...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGCCTTCACACTGCGATaGATTTCTCTCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAAFTLR*ISLWSC
Trigger: ACAGCTCCAGAGAGAAATGCATCGCAGTGTGAAGGC...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGGAGCGCGTGGACACCTaGCAGTTTCTTTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKERVDT*QFLWLF
Trigger: AAAGAGCCAAAGAAACTGGCAGGTGTCCACGCGCTC...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCCCTTTTTGCTGAGCTaGTCTTTAAAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVPFLLS*SLKWPR
Trigger: CCTGGGCCACTTTAAAGAGCAGCTCAGCAAAAAGGG...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCCCCTTTTTGCTGAGCTaGTCTTTAAAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAPFLLS*SLKWPR
Trigger: CCTGGGCCACTTTAAAGAGCAGCTCAGCAAAAAGGG...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAACGATCCGCTCCACTTTaGCCAGAATCCGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKRSAPL*PESGLH
Trigger: ATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCG...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAATGTGTGGAGGAAAGGTaGTGCTGGGTCTCCCTACAA +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQCVEER*CWVSLQ
Trigger: TTGTAGGGAGACCCAGCAGCACCTTTCCTCCACACA...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCTCTCAGCAATCGGCGTaGTCTCTCTGTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTSQQSA*SLCLSQ
Trigger: TTGAGAGAGACAGAGAGACCACGCCGATTGCTGAGA...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTCCCTGGCTGACACGGTaGGGTCTCCCCTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSPWLTR*GLPFFP
Trigger: GGGGAAGAAGGGGAGACCCCACCGTGTCAGCCAGGG...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACCCTGGCTGACACGGTaGGGTCTCCCCTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AKHNSSVSEETMNALLAQPWLTR*GLPFFP
Trigger: GGGGAAGAAGGGGAGACCCCACCGTGTCAGCCAGGG...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACATCTTCGTTCCGCCTaGTGTTGGAAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPHLRSA*CWKRQA
Trigger: TGCCTGTCTCTTCCAACACCAGGCGGAACGAAGATG...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTATGTAGGTCTTGGTaGCAGGCTTCAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSQLLTAKTVHKSFGLQQLCRSW*QASAAW
Trigger: CCAAGCAGCTGAAGCCTGCCACCAAGACCTACATAA...CTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCATTATGTAGGTCTTGGTaGCAGGCTTCAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RSCSQPRQFTRASGSNSSLCRSW*QASAAW
Trigger: CCAAGCAGCTGAAGCCTGCCACCAAGACCTACATAA...TGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCATCTCGGTCTGCGCCTaGTCAAACATGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPISVCA*SNMMES
Trigger: TGATTCCATCATGTTTGACCAGGCGCAGACCGAGAT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCCCGTCAGCGCATCACTaGATATCTCACTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSPSAHH*ISHCRW
Trigger: CCAACGACAGTGAGATATCCAGTGATGCGCTGACGG...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGTCAGCGCATCACTaGATATCTCACTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKPSAHH*ISHCRW
Trigger: CCAACGACAGTGAGATATCCAGTGATGCGCTGACGG...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCTGTCCGTCATGGACATaGAATCATCCGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFCPSWT*NHPSAH
Trigger: ATGCGCTGACGGATGATTCCATGTCCATGACGGACA...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCACTGCTGTCCGTCATaGACATGGAATCATCCGTCA +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQHCCPS*TWNHPS
Trigger: TGACGGATGATTCCATGTCCATGACGGACAGCAGTG...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGAATGGTGGTGGTGGTaGTGGTCCGGGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVEWWWW*WSGERE
Trigger: CTCCCGCTCCCCGGACCACCACCACCACCACCATTC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCTGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCG +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSWFPEP*SGFCIS
Trigger: CGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCA...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTGCTGGCTCGTTCGCCTaGAGACGAGCGGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSAGSFA*RRAGRL
Trigger: GAGTCTGCCCGCTCGTCTCCAGGCGAACGAGCCAGC...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCTCCCGTCTGAACAGTaGCCGAATGATTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NVLSQLLTAKTVHKSFGLLPSEQ*PNDSCP
Trigger: GGGACAGGAATCATTCGGCCACTGTTCAGACGGGAG...GAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAATTCTGGAGCCAGGCTTaGATTGGAGAAGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKFWSQA*IGEGCG
Trigger: GCCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAA...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACGATGATGACGCAACATaGTCAACCCTCAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: GAGFPASPSATDHPIQHNDDDAT*STLKTF
Trigger: AAAGGTCTTGAGGGTTGACCATGTTGCGTCATCATC...GTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGAGGAAAGGTGCTGCTaGGTCTCCCTACAACTGTTC +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKAREERCC*VSLQLF
Trigger: GAACAGTTGTAGGGAGACCCAGCAGCACCTTTCCTC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAATGGGTTCTCGGGAAATaGGGTAGAGACACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKWVLGK*GRDTWP
Trigger: TGGCCAAGTGTCTCTACCTCATTTCCCGAGAACCCA...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTTCTTTGGCTCTTTGTaGTCTTCTGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSFFGSL*SSGARL
Trigger: AAGCCTGGCTCCAGAAGATCACAAAGAGCCAAAGAA...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGCACAGAAAAAGTAAGTaGCAACCAACTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRHRKSK*QPTHWP
Trigger: AGGCCAGTGAGTTGGTTGTCACTTACTTTTTCTGTG...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACAAACAAGGGAAAGCTTaGGCCCTCAATATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHKQGKA*ALNIGR
Trigger: TCGCCCTATATTGAGGGCTCAAGCTTTCCCTTGTTT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCTCCTTCAGGTTCATCTaGCTGAATCCATTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSSFRFI*LNPLQA
Trigger: TGCCTGCAATGGATTCAGGCAGATGAACCTGAAGGA...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCATCCTTCAGGTTCATCTaGCTGAATCCATTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPSFRFI*LNPLQA
Trigger: TGCCTGCAATGGATTCAGGCAGATGAACCTGAAGGA...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGAATTCCATCTACACTaGTGTCCGTCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTEFHLH*CPSWTW
Trigger: CCATGTCCATGACGGACAGCAGTGTAGATGGAATTC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCGAATTCCATCTACACTaGTGTCCGTCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: SQDSSQELRAPTVHQSQTEFHLH*CPSWTW
Trigger: CCATGTCCATGACGGACAGCAGTGTAGATGGAATTC...GGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTGAATTCCATCTACACTaGTGTCCGTCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVEFHLH*CPSWTW
Trigger: CCATGTCCATGACGGACAGCAGTGTAGATGGAATTC...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGGAGCTGTTTCTTACTaGCCACACGATAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTGAVSY*PHDKEE
Trigger: TTCCTCCTTATCGTGTGGGCAGTAAGAAACAGCTCC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACATTGGCCTTCACACTaGGATGCATTTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPHWPSH*DAFLSG
Trigger: TCCAGAGAGAAATGCATCGCAGTGTGAAGGCCAATG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCATTGGCCTTCACACTaGGATGCATTTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSHWPSH*DAFLSG
Trigger: TCCAGAGAGAAATGCATCGCAGTGTGAAGGCCAATG...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTTGGTCACAAAGCCTTTaGCCCCGAGGAGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSWSQSL*PRGGGR
Trigger: CCTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCA...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACATGCTTCGTCGTCTaGTTGGTCACAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQTCFVV*LVTKPL
Trigger: CAAAGGCTTTGTGACCAAGCAGACGACGAAGCATGT...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACCCCTTTTTGCTGAGCTaGTCTTTAAAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNPFLLS*SLKWPR
Trigger: CCTGGGCCACTTTAAAGAGCAGCTCAGCAAAAAGGG...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAACATCTTCGTTCCGCCTaGTGTTGGAAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKHLRSA*CWKRQA
Trigger: TGCCTGTCTCTTCCAACACCAGGCGGAACGAAGATG...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCCACTGCTGTCCGTCATaGACATGGAATCATCCGTCA +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSHCCPS*TWNHPS
Trigger: TGACGGATGATTCCATGTCCATGACGGACAGCAGTG...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACACTGCTGTCCGTCATaGACATGGAATCATCCGTCA +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPHCCPS*TWNHPS
Trigger: TGACGGATGATTCCATGTCCATGACGGACAGCAGTG...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTGAATGGTGGTGGTGGTaGTGGTCCGGGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFEWWWW*WSGERE
Trigger: CTCCCGCTCCCCGGACCACCACCACCACCACCATTC...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACTGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCG +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNWFPEP*SGFCIS
Trigger: CGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCA...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACTCTTTGTGATCTTCTaGAGCCAGGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPLFVIF*SQAWIG
Trigger: TCCAATCCAAGCCTGGCTCCAGAAGATCACAAAGAG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCTCTTTGTGATCTTCTaGAGCCAGGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQLFVIF*SQAWIG
Trigger: TCCAATCCAAGCCTGGCTCCAGAAGATCACAAAGAG...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp GGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACTCCATAAACTGGGGATaGGGGAAATCAACTGTTCTA +
Preference number: 4 (lower is better)
Translates to: GAGFPASPSATDHPIQHNSINWG*GKSTVL
Trigger: TAGAACAGTTGATTTCCCCCATCCCCAGTTTATGGA...GTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGGGAGCTCTTCCCACTaGGTCTGGGAATTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKGSSSH*VWEFFF
Trigger: GAAGAAAAATTCCCAGACTCAGTGGGAAGAGCTCCC...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGCAGGCATGGGTTTGGTaGCCTGGCCCTTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKQAWVW*PGPCPP
Trigger: GGGTGGGCAAGGGCCAGGTCACCAAACCCATGCCTG...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCCACAGAAAAAGTAAGTaGCAACCAACTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTHRKSK*QPTHWP
Trigger: AGGCCAGTGAGTTGGTTGTCACTTACTTTTTCTGTG...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTGACACACGGAGCGGGTaGCCGTGCAGGTACAGGTAC +
Preference number: 4 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFDTRSG*PCRYRY
Trigger: GTACCTGTACCTGCACGGTCACCCGCTCCGTGTGTC...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTACCTCACGGAAGCTGCTaGTGGGGTCCGGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLPHGSC*WGPGGK
Trigger: CTTGCCTCCCGGACCCCAGCAGCAGCTTCCGTGAGG...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGCTGCTTGGAGACAATaGTGTTGTTCTCAATGTACC +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTAAWRQ*CCSQCT
Trigger: GGTACATTGAGAACAACAGCATTGTCTCCAAGCAGC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGGAGCTGTTTCTTACTaGCCACACGATAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARGAVSY*PHDKEE
Trigger: TTCCTCCTTATCGTGTGGGCAGTAAGAAACAGCTCC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCGGAGCTGTTTCTTACTaGCCACACGATAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSGAVSY*PHDKEE
Trigger: TTCCTCCTTATCGTGTGGGCAGTAAGAAACAGCTCC...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACACATTGGCCTTCACACTaGGATGCATTTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTHWPSH*DAFLSG
Trigger: TCCAGAGAGAAATGCATCGCAGTGTGAAGGCCAATG...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCGGTCTTCCTCGTAGCTaGCGGAGGGCAGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVGLPRS*RRAVGR
Trigger: TCTCCCTACTGCCCTCCGGCAGCTACGAGGAAGACC...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAACATGCTTCGTCGTCTaGTTGGTCACAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARTCFVV*LVTKPL
Trigger: CAAAGGCTTTGTGACCAAGCAGACGACGAAGCATGT...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCCTGCTGCCGCCAAACTaGTCGCTGGGCATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVLLPPN*SLGMVS
Trigger: GGAAACCATGCCCAGCGAGCAGTTTGGCGGCAGCAG...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTCCAGGCCCGGCTCCGTaGCTTTCCCATTGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: QAFLISVSTQLMNHENQPPGPAP*LSHCVW
Trigger: CCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGG...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGATGTTTTGTCGCAGTTaGTCACAGCCAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQMFCRS*SQPRQF
Trigger: GAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGATCTCGGTCTGCGCCTaGTCAAACATGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: CSQPRQFTRASGSNSSPKISVCA*SNMMES
Trigger: TGATTCCATCATGTTTGACCAGGCGCAGACCGAGAT...CTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAATCTCGGTCTGCGCCTaGTCAAACATGATGGAATCA +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTISVCA*SNMMES
Trigger: TGATTCCATCATGTTTGACCAGGCGCAGACCGAGAT...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACAAGCCAACCACGGTTaGCGAAAGTTTGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPQANHG*RKFALE
Trigger: TTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTG...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACCAAGCCAACCACGGTTaGCGAAAGTTTGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNQANHG*RKFALE
Trigger: TTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTG...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp AATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCTGTCCGTCATGGACATaGAATCATCCGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: NVLSQLLTAKTVHKSFGLCPSWT*NHPSAH
Trigger: ATGCGCTGACGGATGATTCCATGTCCATGACGGACA...GAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGCGGGGGTCATCTCCTTaGGCAGGCGGTGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKRGSSP*AGGGFS
Trigger: CGAGAACCCACCGCCTGCCCAAGGAGATGACCCCCG...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGTCCATAAACTGGGGATaGGGGAAATCAACTGTTCTA +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRSINWG*GKSTVL
Trigger: TAGAACAGTTGATTTCCCCCATCCCCAGTTTATGGA...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGATGATGACGCAACATaGTCAACCCTCAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTDDDAT*STLKTF
Trigger: AAAGGTCTTGAGGGTTGACCATGTTGCGTCATCATC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACGAAATCCATCGCTCTaGGGGGTTATTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPRNPSL*GVIFIS
Trigger: GGAAATAAAAATAACCCCTCAGAGCGATGGATTTCG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp AATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCTTCTTTGGCTCTTTGTaGTCTTCTGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NVLSQLLTAKTVHKSFGLFFGSL*SSGARL
Trigger: AAGCCTGGCTCCAGAAGATCACAAAGAGCCAAAGAA...GAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCACACAGAAAAAGTAAGTaGCAACCAACTCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPHRKSK*QPTHWP
Trigger: AGGCCAGTGAGTTGGTTGTCACTTACTTTTTCTGTG...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAAGCTGCTTGGAGACAATaGTGTTGTTCTCAATGTACC +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQAAWRQ*CCSQCT
Trigger: GGTACATTGAGAACAACAGCATTGTCTCCAAGCAGC...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCATGATGGAATCAATCTaGTGCTTCTTGATGCCATCT +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPMMESI*CFLMPS
Trigger: AGATGGCATCAAGAAGCAGCAGATTGATTCCATCAT...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAACATGCTTCGTCGTCTaGTTGGTCACAAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKTCFVV*LVTKPL
Trigger: CAAAGGCTTTGTGACCAAGCAGACGACGAAGCATGT...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTCCTTGGAGTGGCTTTTaGATTTCGAGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSPWSGF*ISSSSN
Trigger: ATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGG...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCCCTTGGAGTGGCTTTTaGATTTCGAGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAPWSGF*ISSSSN
Trigger: ATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGG...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCATGTTTTGTCGCAGTTaGTCACAGCCAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSMFCRS*SQPRQF
Trigger: GAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTACACGGAAGCTGCTGCTaGGGTCCGGGAGGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLHGSCC*GPGGKS
Trigger: TGACTTGCCTCCCGGACCCCAGCAGCAGCTTCCGTG...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTAATGGGTTTGGTGACCTaGCCCTTGCCCACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLMGLVT*PLPTPG
Trigger: GCCAGGGGTGGGCAAGGGCCAGGTCACCAAACCCAT...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CTGTCATTTCCACGAAAGCACAGCGGCAGTGATTCTAGCAGGCCTCAGGGCCCTCTACTCGTAAAGTTTTaGTATCCTTCAGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LSFPRKHSGSDSSRPQGPLLVKF*YPSGSS
Trigger: AGATGAACCTGAAGGATACCAAAACTTTACGAGTAG...AGGGCCCTGAGGCCTGCTAGAATCACTGCCGCTGTGCTTTCGTGGAAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGTTTTGTAGATCGCTTTaGCTACTCGTAAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DSSQELRAPTVHQSQTPGFCRSL*LLVKFW
Trigger: CCAAAACTTTACGAGTAGCCAAAGCGATCTACAAAA...CCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAACTTCTTCATTCAAGGTaGGGAGATAGCCACACACGA +
Preference number: 4 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKLLHSR*GDSHTR
Trigger: TCGTGTGTGGCTATCTCCCCACCTTGAATGAAGAAG...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTAGCTCAGCTGCAAAGGTaGCGGGTTCCACGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLAQLQR*RVPRGS
Trigger: TGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGC...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTATGGATTTCAGATCCCTAGGAAGTCATATATTATGTATGGCAGTCTCTCAAGTGCACCCGCTGCGTaGCCTCCGCCTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: VYGFQIPRKSYIMYGSLSSAPAA*PPPRSP
Trigger: AGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACT...TGAGAGACTGCCATACATAATATATGACTTCCTAGGGATCTGAAATCCATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCACTGCTCGCTGGGCATaGTTTCCGGAGCCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVTARWA*FPEPWS
Trigger: ACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGT...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCTCTTTGTGATCTTCTaGAGCCAGGCTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: NVLSQLLTAKTVHKSFGLLFVIF*SQAWIG
Trigger: TCCAATCCAAGCCTGGCTCCAGAAGATCACAAAGAG...GAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGACCAACTCACTGGCCTaGAGCGCGTGGACACCTGCC +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKTNSLA*SAWTPA
Trigger: GGCAGGTGTCCACGCGCTCCAGGCCAGTGAGTTGGT...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp AGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCATGATGGAATCAATCTaGTGCTTCTTGATGCCATCT +
Preference number: 4 (lower is better)
Translates to: SQDSSQELRAPTVHQSQTMMESI*CFLMPS
Trigger: AGATGGCATCAAGAAGCAGCAGATTGATTCCATCAT...GGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCTGGCCCTCAGAGTTTTaGTGGACAAGCCAACCACGG +
Preference number: 4 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVWPSEF*WTSQPR
Trigger: CCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCA...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAAAGCAGTAATACTCGCTaGCCCCAGGGCAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: AKHNSSVSEETMNALLAQSSNTR*PQGRSS
Trigger: ACTGCTTCTGCCCTGGGGGCAGCGAGTATTACTGCT...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACACCTTGGAGTGGCTTTTaGATTTCGAGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTPWSGF*ISSSSN
Trigger: ATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGG...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR GCA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTCTCTCCAGCATCCACTaGCAGACATCCTGCGACCTG +
Preference number: 4 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFLSSIH*QTSCDL
Trigger: CAGGTCGCAGGATGTCTGGCAGTGGATGCTGGAGAG...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR GCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTGTGGAGGAAAGGTGCTaGTGGGTCTCCCTACAACTG +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSVEERC*WVSLQL
Trigger: CAGTTGTAGGGAGACCCAGCAGCACCTTTCCTCCAC...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGCTACTCGTAAAGTTTTaGTATCCTTCAGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRLLVKF*YPSGSS
Trigger: AGATGAACCTGAAGGATACCAAAACTTTACGAGTAG...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCCTACTCGTAAAGTTTTaGTATCCTTCAGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPLLVKF*YPSGSS
Trigger: AGATGAACCTGAAGGATACCAAAACTTTACGAGTAG...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CCA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGGCTCAGCTGCAAAGGTaGCGGGTTCCACGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWAQLQR*RVPRGS
Trigger: TGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGC...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGTGGTACTGCGAATGGTaGTGGTGGTGGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKWYCEW*WWWWSG
Trigger: CCCGGACCACCACCACCACCACCATTCGCAGTACCA...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTGTGCTTTGGGCACTATaGGGCTTGGGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFVLWAL*GLGLLC
Trigger: GCAGAGCAAGCCCAAGCCCCATAGTGCCCAAAGCAC...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTCTCCCGTCTGAACAGTaGCCGAATGATTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSLPSEQ*PNDSCP
Trigger: GGGACAGGAATCATTCGGCCACTGTTCAGACGGGAG...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGTGGCAGGCTTCAGCTaGTTGGAGACAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVVAGFS*LETMLL
Trigger: CAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCAC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTGTTTGGGCAAGGTACTaGCTCTGCTGCCGCCAAACT +
Preference number: 4 (lower is better)
Translates to: QAFLISVSTQLMNHENQPVWARY*LCCRQT
Trigger: AGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAAC...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp GTTTATGGATTTCAGATCCCTAGGAAGTCATATATTATGTATGGCAGTCTCTCATCCTCCATCACCGACTaGATCTCGGTCTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VYGFQIPRKSYIMYGSLSSSITD*ISVCAW
Trigger: CCAGGCGCAGACCGAGATCCAGTCGGTGATGGAGGA...TGAGAGACTGCCATACATAATATATGACTTCCTAGGGATCTGAAATCCATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGACCTCACACTCGCCGTaGCCCTCAGAGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKTSHSP*PSEFCW
Trigger: CCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGT...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAAGAGACACTTGGCCATTaGCCTTCACACTGCGATGCA +
Preference number: 4 (lower is better)
Translates to: AKHNSSVSEETMNALLAQETLGH*PSHCDA
Trigger: TGCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTC...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCCTTTCCCATTGCGTTTaGGCAAGGTACTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVLSHCV*ARYCLC
Trigger: GCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAG...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGAGGAAAGGTGCTGCTaGGTCTCCCTACAACTGTTC +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVEERCC*VSLQLF
Trigger: GAACAGTTGTAGGGAGACCCAGCAGCACCTTTCCTC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
3UTR CAA 72 bp CAACAGATCATCCCATCCAACACAACCCCCAAAATGTaGATGATGACGCAACATGGTCAACCCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QQIIPSNTTPKM*MMTQHGQPSRP
Trigger: AGGTCTTGAGGGTTGACCATGTTGCGTCATCATCAACATTTTGGGGGTTGTGTTGGATGGGATGATCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAATTTTGTAGATCGCTTTaGCTACTCGTAAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQFCRSL*LLVKFW
Trigger: CCAAAACTTTACGAGTAGCCAAAGCGATCTACAAAA...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR TCA 90 bp CATATATTATGTATGGCAGTCTCTCAAATACAGGCAGCATCTTCAATAGCCAAGCAGGATCGCTCCTCTTaGAGGACCTGTATCCACTGT +
Preference number: 4 (lower is better)
Translates to: HILCMAVSQIQAASSIAKQDRSS*RTCIHC
Trigger: ACAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTG...CTTGGCTATTGAAGATGCTGCCTGTATTTGAGAGACTGCCATACATAATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCACCCGAACATCAAAATaGAGGTGTGTGGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVTRTSK*RCVEER
Trigger: CCTTTCCTCCACACACCTTCATTTTGATGTTCGGGT...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp ACGCACCAATTTCTGCATGTGTCAATGGTAGGGCACCATTTTAAAAAGTCTGTCAAACAAGGGAAAGCTTaGGCCCTCAATATAGGGCGA +
Preference number: 4 (lower is better)
Translates to: THQFLHVSMVGHHFKKSVKQGKA*ALNIGR
Trigger: TCGCCCTATATTGAGGGCTCAAGCTTTCCCTTGTTT...GACAGACTTTTTAAAATGGTGCCCTACCATTGACACATGCAGAAATTGGTGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTTCCTTCAGGTTCATCTaGCTGAATCCATTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSSFRFI*LNPLQA
Trigger: TGCCTGCAATGGATTCAGGCAGATGAACCTGAAGGA...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGCCCTGCCTCTCCCTCTaGAACAGATCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWPCLSL*NRSSHP
Trigger: TGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGG...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCCAAGCCAACCACGGTTaGCGAAAGTTTGCACTTGAA +
Preference number: 4 (lower is better)
Translates to: SVSEETMNALLAQLLSLVQANHG*RKFALE
Trigger: TTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTG...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGTGTCAACAGTTTCCGTaGACCTCACACTCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWCQQFP*TSHSPW
Trigger: CCACGGCGAGTGTGAGGTCCACGGAAACTGTTGACA...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTTGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCG +
Preference number: 4 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFWFPEP*SGFCIS
Trigger: CGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCA...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGTCATATATTATGTATaGCAGTCTCTCAAATACAGG +
Preference number: 4 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARVIYYV*QSLKYR
Trigger: CCTGTATTTGAGAGACTGCCATACATAATATATGAC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAAGTCATATATTATGTATaGCAGTCTCTCAAATACAGG +
Preference number: 4 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQVIYYV*QSLKYR
Trigger: CCTGTATTTGAGAGACTGCCATACATAATATATGAC...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAAGCTGCTTGGAGACAATaGTGTTGTTCTCAATGTACC +
Preference number: 4 (lower is better)
Translates to: AKHNSSVSEETMNALLAQAAWRQ*CCSQCT
Trigger: GGTACATTGAGAACAACAGCATTGTCTCCAAGCAGC...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTATTCTTTGGCTCTTTGTaGTCTTCTGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLFFGSL*SSGARL
Trigger: AAGCCTGGCTCCAGAAGATCACAAAGAGCCAAAGAA...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTATGGATTTCAGATCCCTAGGAAGTCATATATTATGTATGGCAGTCTCTCATCTCAGCAATCGGCGTaGTCTCTCTGTCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VYGFQIPRKSYIMYGSLSSQQSA*SLCLSQ
Trigger: TTGAGAGAGACAGAGAGACCACGCCGATTGCTGAGA...TGAGAGACTGCCATACATAATATATGACTTCCTAGGGATCTGAAATCCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp GTTTATGGATTTCAGATCCCTAGGAAGTCATATATTATGTATGGCAGTCTCTCACTTCTTCATTCAAGGTaGGGAGATAGCCACACACGA +
Preference number: 4 (lower is better)
Translates to: VYGFQIPRKSYIMYGSLSLLHSR*GDSHTR
Trigger: TCGTGTGTGGCTATCTCCCCACCTTGAATGAAGAAG...TGAGAGACTGCCATACATAATATATGACTTCCTAGGGATCTGAAATCCATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR TCA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGCGAAATCCATCGCTCTaGGGGGTTATTTTTATTTCC +
Preference number: 4 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWRNPSL*GVIFIS
Trigger: GGAAATAAAAATAACCCCTCAGAGCGATGGATTTCG...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CCA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTTTTTGTAGATCGCTTTaGCTACTCGTAAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QAFLISVSTQLMNHENQPFCRSL*LLVKFW
Trigger: CCAAAACTTTACGAGTAGCCAAAGCGATCTACAAAA...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR GCA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGATGATGGAATCAATCTaGTGCTTCTTGATGCCATCT +
Preference number: 4 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWMMESI*CFLMPS
Trigger: AGATGGCATCAAGAAGCAGCAGATTGATTCCATCAT...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS GCA 90 bp GCCGCGGGAGGCAGCTTGCCACCGGGCGGGAGCAGGGAGTGGTACTaGGAATGGTGGTGGTGGTGGTGGTCCGGGGAGCGGGAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: AAGGSLPPGGSREWY*EWWWWWWSGERERG
Trigger: CCCCCGCTCCCGCTCCCCGGACCACCACCACCACCACCATTCGCAGTACCACTCCCTGCTCCCGCCCGGTGGCAAGCTGCCTCCCGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS TCA 90 bp TGTCCTCCGAGCCCCTCCGGCCCGGTCCCCCGGCCCAAATGCAACTaGACGCCTCCAGAGCCCTGGCGGGCACACCTCGAGGCCGGAACC +
Preference number: 5 (lower is better)
Translates to: CPPSPSGPVPRPKCN*TPPEPWRAHLEAGT
Trigger: GGTTCCGGCCTCGAGGTGTGCCCGCCAGGGCTCTGGAGGCGTTCAGTTGCATTTGGGCCGGGGGACCGGGCCGGAGGGGCTCGGAGGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585045.1
ENST00000611991.1
CDS GCA 90 bp CGGGGGCCCCTCCTTCCCTGGCGGGCAGGGCCAGGCCCGGCTCCGTaGCTTTCCCATTGCGTTTGGGCAAGGTACTGCCTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: RGPLLPWRAGPGPAP*LSHCVWARYCLCCR
Trigger: GCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGCCAGGGAAGGAGGGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS GCA 90 bp CTTCCCTGGCGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATTaGGTTTGGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGCTCGC +
Preference number: 5 (lower is better)
Translates to: LPWRAGPGPAPCLSH*VWARYCLCCRQTAR
Trigger: GCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGCCAGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 90 bp TGGCGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATTGCGTTTaGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGCTCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WRAGPGPAPCLSHCV*ARYCLCCRQTARWA
Trigger: TGCCCAGCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 90 bp AGTAATACTCGCTGCCCCCAGGGCAGAAGCAGTGCACCCGCTGCGTaGCCTCCGCCTCGATCTCCTCCTTGGTCTTGGGGACGGCATGGT +
Preference number: 5 (lower is better)
Translates to: SNTRCPQGRSSAPAA*PPPRSPPWSWGRHG
Trigger: ACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGGGGGCAGCGAGTATTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAATTGGTCACAAAGCCTTaGCCCCCGAGGAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQLVTKP*PPRRGQ
Trigger: CTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCAA...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS GCA 90 bp CTATGGGGCTTGGGCTTGCTCTGCCGCTCACTCTCCAGCATCCACTaGCAGACATCCTGCGACCTGTCTCCTTCCTCCCGGGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LWGLGLLCRSLSSIH*QTSCDLSPSSRGSC
Trigger: GCAGCTTCCCCGGGAGGAAGGAGACAGGTCGCAGGATGTCTGGCAGTGGATGCTGGAGAGTGAGCGGCAGAGCAAGCCCAAGCCCCATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 90 bp CCAGCTTCAGCTTTTCCAGCCTCGAGATCAGCTCAGCTGCAAAGGTaGCGGGTTCCACGGGGGTCATCTCCTTGGGCAGGCGGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: PASAFPASRSAQLQR*RVPRGSSPWAGGGF
Trigger: GAACCCACCGCCTGCCCAAGGAGATGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGCTGATCTCGAGGCTGGAAAAGCTGAAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAAGTGGCCCTCAGAGTTTaGCTGGACAAGCCAACCACG +
Preference number: 5 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQVALRV*LDKPTT
Trigger: CGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCAC...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCTCCTCCTTGGTCTaGGGGACGGCATGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: STWGPKEQGSLPLPLQQIISSLV*GTAWWW
Trigger: CCACCACCATGCCGTCCCCAAGACCAAGGAGGAGAT...GATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAGCCTCGATCTCCTCCTaGGTCTTGGGGACGGCATGG +
Preference number: 5 (lower is better)
Translates to: RESLSPQYRATHGAGDRAASISS*VLGTAW
Trigger: CCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGGC...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp GCAGGGTTCCCTGCCTCTCCCTCTGCAACAGATCATCCCATCCAACACAACCCCCACAGCACCGCTGCTTaGGGGGCTTCGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: AGFPASPSATDHPIQHNPHSTAA*GASTPQ
Trigger: CTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTG...GGGGTTGTGTTGGATGGGATGATCTGTTGCAGAGGGAGAGGCAGGGAACCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS CCA 90 bp ACAGGTAAGCACCGTCTTGATCGCCCAATAAGGAGTGTAAGGACTTaGTCCACCGGGTCAGAGGGGAATCCGGAGATGCCCGCCCCTCCG +
Preference number: 5 (lower is better)
Translates to: TGKHRLDRPIRSVRT*STGSEGNPEMPAPP
Trigger: CGGAGGGGCGGGCATCTCCGGATTCCCCTCTGACCCGGTGGACCAAGTCCTTACACTCCTTATTGGGCGATCAAGACGGTGCTTACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000544103.2
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000611991.1
ENST00000618960.4
CDS CCA 90 bp GAGCCAGGCTTGGATTGGAGAAGGGTGTGGCTCCCGTCTGAACAGTaGCCGAATGATTCCTGTCCCTCTGCTGACTGGCCACACAGCACC +
Preference number: 5 (lower is better)
Translates to: EPGLDWRRVWLPSEQ*PNDSCPSADWPHST
Trigger: GGTGCTGTGTGGCCAGTCAGCAGAGGGACAGGAATCATTCGGCCACTGTTCAGACGGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000578251.1
ENST00000618960.4
CDS-3UTR CAA 90 bp CTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAACCTGGGACAGGATCGCTCCTCTaGAAGGACCTGTATCCACTG +
Preference number: 5 (lower is better)
Translates to: LGLGRLHEGEPQSQDQPGTGSLL*KDLYPL
Trigger: CAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTGT...CCCAGGTTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGCCTGGGGAGGCTACATGAGGGGGAGCCTCAGTCACAGGATCAAAGGGGTAGGCCTTTTTaGTGCTTTGGGCACTATGGG +
Preference number: 5 (lower is better)
Translates to: RALGLGRLHEGEPQSQDQRGRPF*CFGHYG
Trigger: CCCATAGTGCCCAAAGCACAAAAAAGGCCTACCCCT...TTGATCCTGTGACTGAGGCTCCCCCTCATGTAGCCTCCCCAGGCCCAGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CAA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCCACAGCACCGCTGCTTaGGGGGCTTCGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGHSTAA*GASTPQ
Trigger: CTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTG...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGTCACAGGATCAACCTGGGGCCCGAAGGAGCAGGGTTCCCTGCCTCTCCCTCTCGGGCTGTTACTGAGTaGCCAGGACCTTATCAAAGC +
Preference number: 5 (lower is better)
Translates to: SHRINLGPEGAGFPASPSRAVTE*PGPYQS
Trigger: GCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCG...AGAGGGAGAGGCAGGGAACCCTGCTCCTTCGGGCCCCAGGTTGATCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAGCCCCCTCCCGCGAATaGAGTGTGAGCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: CFVAVAHSQDSSQELRAPAPSRE*SVSSEP
Trigger: GGGCTCCGAGCTCACACTCAATTCGCGGGAGGGGGC...TGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGCCCCCTCCCGCGAATaGAGTGTGAGCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARAPSRE*SVSSEP
Trigger: GGGCTCCGAGCTCACACTCAATTCGCGGGAGGGGGC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 90 bp CTGAGGGGTTATTTTTATTTCCCGGCTCTCGGGCTGTTACTGAGTTaGCAGGACCTTATCAAAGCGCAGCCGGCTCCAGCCGACTCCCCC +
Preference number: 5 (lower is better)
Translates to: LRGYFYFPALGLLLS*QDLIKAQPAPADSP
Trigger: GGGGGAGTCGGCTGGAGCCGGCTGCGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAGCCGGGAAATAAAAATAACCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS GCA 90 bp GTTCACCAAAGCCAGACCCCAGGGCTCAATCGATCCGCTCCACTTTaGCCAGAATCCGGCCTTCATACATCGGGAGCACCGTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: VHQSQTPGLNRSAPL*PESGLHTSGAPSHP
Trigger: AGGATGAGACGGTGCTCCCGATGTATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGATTGAGCCCTGGGGTCTGGCTTTGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 90 bp CTCTGCTGCCGCCAAACTGCTCGCTGGGCATGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCGAGTAGCAGTAATACTCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LCCRQTARWAWFPEP*SGFCISSSSNTRCP
Trigger: GGGGCAGCGAGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGCGGCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CAA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCGAGACAGGCATGGGTTaGGTGACCTGGCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAETGMG*VTWPLP
Trigger: GGGCAAGGGCCAGGTCACCAAACCCATGCCTGTCTC...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CTGTCATTTCCACGAAAGCACAGCGGCAGTGATTCTAGCAGGCCTCAGGGCCCTAAGGAGTGTAAGGACTaGGTCCACCGGGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LSFPRKHSGSDSSRPQGPKECKD*VHRVRG
Trigger: CCCTCTGACCCGGTGGACCAAGTCCTTACACTCCTT...AGGGCCCTGAGGCCTGCTAGAATCACTGCCGCTGTGCTTTCGTGGAAATGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAACGGGGGTCATCTCCTaGGGCAGGCGGTGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQTGVIS*GRRWVL
Trigger: GAGAACCCACCGCCTGCCCAAGGAGATGACCCCCGT...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAACGGGGGTCATCTCCTaGGGCAGGCGGTGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTTGVIS*GRRWVL
Trigger: GAGAACCCACCGCCTGCCCAAGGAGATGACCCCCGT...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCACGGGGGTCATCTCCTaGGGCAGGCGGTGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSTGVIS*GRRWVL
Trigger: GAGAACCCACCGCCTGCCCAAGGAGATGACCCCCGT...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACTTGGTCACAAAGCCTTaGCCCCCGAGGAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHLVTKP*PPRRGQ
Trigger: CTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCAA...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 90 bp CAAACTGCTCGCTGGGCATGGTTTCCGGAGCCTTGGAGTGGCTTTTaGATTTCGAGTAGCAGTAATACTCGCTGCCCCCAGGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: QTARWAWFPEPWSGF*ISSSSNTRCPQGRS
Trigger: GCTTCTGCCCTGGGGGCAGCGAGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGACAGGCATGGGTTaGGTGACCTGGCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPETGMG*VTWPLP
Trigger: GGGCAAGGGCCAGGTCACCAAACCCATGCCTGTCTC...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGCCTCGATCTCCTCCTaGGTCTTGGGGACGGCATGG +
Preference number: 5 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPASISS*VLGTAW
Trigger: CCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGGC...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGGAGCCAGGCTTGGATaGGAGAAGGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARGARLG*EKGVAP
Trigger: GGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTCC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCTCGATCCGCTCCACTTaGCCCAGAATCCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPSIRST*PRIRPS
Trigger: TGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGA...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 90 bp ACCTGTATCCACTGTCAACAGTTTCCGTGGACCTCACACTCGCCGTaGCCCTCAGAGTTTTGCTGGACAAGCCAACCACGGTTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: TCIHCQQFPWTSHSP*PSEFCWTSQPRLAK
Trigger: TTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCACGGAAACTGTTGACAGTGGATACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 90 bp TGCTTTGGGCACCAAACTGCTCGCTGGGCATGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCGAGTAGCAGTAATACTCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: CFGHQTARWAWFPEP*SGFCISSSSNTRCP
Trigger: GGGGCAGCGAGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGTGCCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTTCGTTCCGCCTGGTGTaGGAAGAGACAGGCATGGGT +
Preference number: 5 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVSFRLV*EETGMG
Trigger: ACCCATGCCTGTCTCTTCCAACACCAGGCGGAACGA...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAAAGGAGTGTAAGGACTaGGTCCACCGGGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPKECKD*VHRVRG
Trigger: CCCTCTGACCCGGTGGACCAAGTCCTTACACTCCTT...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCAAGGAGTGTAAGGACTaGGTCCACCGGGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSKECKD*VHRVRG
Trigger: CCCTCTGACCCGGTGGACCAAGTCCTTACACTCCTT...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAACGGTTGGCGAAAGTTaGCACTTGAAGTCGGCACAA +
Preference number: 5 (lower is better)
Translates to: RESLSPQYRATHGAGDRATVGES*HLKSAQ
Trigger: TTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCGTGGCCCTCAGAGTTTaGCTGGACAAGCCAACCACG +
Preference number: 5 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTVALRV*LDKPTT
Trigger: CGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCAC...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGAGAGACACTTGGCCATaGGCCTTCACACTGCGATGC +
Preference number: 5 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRRDTWP*AFTLRC
Trigger: GCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTCT...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCTGCTTCGTCGTCTGCTaGGTCACAAAGCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPCFVVC*VTKPLP
Trigger: GGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGCA...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAATCTCCTCCTTGGTCTaGGGGACGGCATGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQISSLV*GTAWWW
Trigger: CCACCACCATGCCGTCCCCAAGACCAAGGAGGAGAT...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGGAAAGCTTGAGCCCTCAATATAGGGCGACACACGGAGCGGGTGACCGTGCAATGGTTTCCGGAGCCTaGGAGTGGCTTTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: RESLSPQYRATHGAGDRAMVSGA*EWLLHF
Trigger: GAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCAT...TGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTGAGGGCTCAAGCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGTCCGTGCCTTTCCCATaGCGTTTGGGCAAGGTACTG +
Preference number: 5 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRSVPFP*RLGKVL
Trigger: CAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGA...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CAA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGGAGCCAGGCTTGGATaGGAGAAGGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKGARLG*EKGVAP
Trigger: GGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTCC...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGCTTCTGGAGCCAGGCTaGGATTGGAGAAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LSQLLTAKTVHKSFGLQQLLEPG*DWRRVW
Trigger: CCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAAG...CTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCACTTCTGGAGCCAGGCTaGGATTGGAGAAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPLLEPG*DWRRVW
Trigger: CCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAAG...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCTCGATCCGCTCCACTTaGCCCAGAATCCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSSIRST*PRIRPS
Trigger: TGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGA...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCTCGATCCGCTCCACTTaGCCCAGAATCCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTSIRST*PRIRPS
Trigger: TGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGA...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATCGTTCCGCCTGGTGTaGGAAGAGACAGGCATGGGT +
Preference number: 5 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPSFRLV*EETGMG
Trigger: ACCCATGCCTGTCTCTTCCAACACCAGGCGGAACGA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCGCAGGCTTCAGCTGCTaGGAGACAATGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PRQFTRASGSNSSPKPDPAGFSC*ETMLLF
Trigger: GAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGC...GGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAGTGGCCCTCAGAGTTTaGCTGGACAAGCCAACCACG +
Preference number: 5 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARVALRV*LDKPTT
Trigger: CGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCAC...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCAGAGACACTTGGCCATaGGCCTTCACACTGCGATGC +
Preference number: 5 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSRDTWP*AFTLRC
Trigger: GCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTCT...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 90 bp GCAGGCGGTGGGTTCTCGGGAAATGAGGTAGAGACACTTGGCCATTaGCCTTCACACTGCGATGCATTTCTCTCTGGAGCTGTTTCTTAC +
Preference number: 5 (lower is better)
Translates to: AGGGFSGNEVETLGH*PSHCDAFLSGAVSY
Trigger: GTAAGAAACAGCTCCAGAGAGAAATGCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTCTACCTCATTTCCCGAGAACCCACCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCGAAAGTTTGCACTaGAAGTCGGCACAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQGESLH*KSAQVH
Trigger: GTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCC...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCGGCGAAAGTTTGCACTaGAAGTCGGCACAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SQDSSQELRAPTVHQSQTGESLH*KSAQVH
Trigger: GTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCC...GGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCACGGTTGGCGAAAGTTaGCACTTGAAGTCGGCACAA +
Preference number: 5 (lower is better)
Translates to: AKTVHKSFGLQQFTKARPTVGES*HLKSAQ
Trigger: TTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGT...GGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCACAGGATCGCTCCTCTaGAAGGACCTGTATCCACTG +
Preference number: 5 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSTGSLL*KDLYPL
Trigger: CAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTGT...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAAGAGACACTTGGCCATaGGCCTTCACACTGCGATGC +
Preference number: 5 (lower is better)
Translates to: FVAVAHSQDSSQELRAPTRDTWP*AFTLRC
Trigger: GCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTCT...TGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGCCCCCTCCCGCGAATaGAGTGTGAGCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SVSEETMNALLAQLLSLVAPSRE*SVSSEP
Trigger: GGGCTCCGAGCTCACACTCAATTCGCGGGAGGGGGC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACTGCTTCGTCGTCTGCTaGGTCACAAAGCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FCRSCSQPRQFTRASGSNCFVVC*VTKPLP
Trigger: GGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGCA...GTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ATGTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCTGCTTCGTCGTCTGCTaGGTCACAAAGCCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: MFCRSCSQPRQFTRASGSCFVVC*VTKPLP
Trigger: GGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGCA...GGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAAGCAGGCTTCAGCTGCTaGGAGACAATGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQAGFSC*ETMLLF
Trigger: GAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGC...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGGCGAAAGTTTGCACTaGAAGTCGGCACAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPGESLH*KSAQVH
Trigger: GTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCC...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAACGGTTGGCGAAAGTTaGCACTTGAAGTCGGCACAA +
Preference number: 5 (lower is better)
Translates to: QDSSQELRAPTVHQSQTPTVGES*HLKSAQ
Trigger: TTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGT...TGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGAACAGGATCGCTCCTCTaGAAGGACCTGTATCCACTG +
Preference number: 5 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARTGSLL*KDLYPL
Trigger: CAGTGGATACAGGTCCTTCAAGAGGAGCGATCCTGT...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACATGGTTTCCGGAGCCTaGGAGTGGCTTTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: AVAHSQDSSQELRAPTVHMVSGA*EWLLHF
Trigger: GAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCAT...GTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCAATGTTTTGTCGCAGTaGCTCACAGCCAAGACAGTT +
Preference number: 5 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGNVLSQ*LTAKTV
Trigger: AACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTTCCTTCAAAATGTTTaGTCGCAGTTGCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGFLQNV*SQLLTA
Trigger: GGCTGTGAGCAACTGCGACAAAACATTTTGAAGGAA...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCACAGTCTGTCTTCACTaGGAGGGACGTAGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: QLLTAKTVHKSFGLQQFTTVCLH*EGRSAK
Trigger: CTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGT...GGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS TCA 90 bp GAGTTTTGCTGGACAAGCCAACCACGGTTGGCGAAAGTTTGCACTTaGAGTCGGCACAAGTCCACTCCTCTTCTTCATTCAAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: EFCWTSQPRLAKVCT*SRHKSTPLLHSRWG
Trigger: TCCCCACCTTGAATGAAGAAGAGGAGTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGAGACAGGCATGGGTTaGGTGACCTGGCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SVSEETMNALLAQLLSLVETGMG*VTWPLP
Trigger: GGGCAAGGGCCAGGTCACCAAACCCATGCCTGTCTC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCAGGCTTCAGCTGCTaGGAGACAATGCTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LLTAKTVHKSFGLQQFTKAGFSC*ETMLLF
Trigger: GAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGC...TTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAATTGGTCACAAAGCCTTaGCCCCCGAGGAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AKHNSSVSEETMNALLAQLVTKP*PPRRGQ
Trigger: CTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCAA...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp GTTTTGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAAATGGTTTCCGGAGCCTaGGAGTGGCTTTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: VLSQLLTAKTVHKSFGLQMVSGA*EWLLHF
Trigger: GAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCAT...TTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTCACAGCACCGCTGCTTaGGGGGCTTCGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSHSTAA*GASTPQ
Trigger: CTGAGGTGTCGAAGCCCCCAAAGCAGCGGTGCTGTG...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCGGAGCCAGGCTTGGATaGGAGAAGGGTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SVSEETMNALLAQLLSLVGARLG*EKGVAP
Trigger: GGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTCC...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp AAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGCACCTGCCAGTTTCTTaGGCTCTTTGTGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: KTVHKSFGLQQFTKARPQHLPVS*ALCDLL
Trigger: CAGAAGATCACAAAGAGCCAAAGAAACTGGCAGGTG...CTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCACCTGCCAGTTTCTTaGGCTCTTTGTGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: QPRQFTRASGSNSSPKPDHLPVS*ALCDLL
Trigger: CAGAAGATCACAAAGAGCCAAAGAAACTGGCAGGTG...GTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCAAAACAAGGGAAAGCTaGAGCCCTCAATATAGGGCG +
Preference number: 5 (lower is better)
Translates to: SQLLTAKTVHKSFGLQQFKTRES*SPQYRA
Trigger: CGCCCTATATTGAGGGCTCAAGCTTTCCCTTGTTTT...GAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS CCA 90 bp CACGATAAGGAGGAATTCCATCTACACTGCTGTCCGTCATGGACATaGAATCATCCGTCAGCGCATCACTGGATATCTCACTGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: HDKEEFHLHCCPSWT*NHPSAHHWISHCRW
Trigger: CCAACGACAGTGAGATATCCAGTGATGCGCTGACGGATGATTCCATGTCCATGACGGACAGCAGTGTAGATGGAATTCCTCCTTATCGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTACTCGTAAAGTTTaGGTATCCTTCAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: RQFTRASGSNSSPKPDPRATRKV*VSFRFI
Trigger: GATGAACCTGAAGGATACCAAAACTTTACGAGTAGC...CCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp ACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACCCCAGGGCTTGGAGACAATGCTGTaGTTCTCAATGTACCTTTTG +
Preference number: 5 (lower is better)
Translates to: TVHKSFGLQQFTKARPQGLETML*FSMYLL
Trigger: CAAAAGGTACATTGAGAACAACAGCATTGTCTCCAA...GCCCTGGGGTCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTTGGGCACTATGGGGCTaGGGCTTGCTCTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: QAFLISVSTQLMNHENQPWALWG*GLLCRS
Trigger: TGAGCGGCAGAGCAAGCCCAAGCCCCATAGTGCCCA...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS-3UTR CAA 90 bp ACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGACACCTGCCAGTTTCTTaGGCTCTTTGTGATCTTCTG +
Preference number: 5 (lower is better)
Translates to: TAKTVHKSFGLQQFTKARHLPVS*ALCDLL
Trigger: CAGAAGATCACAAAGAGCCAAAGAAACTGGCAGGTG...TCTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTAATGTTTTGTCGCAGTaGCTCACAGCCAAGACAGTT +
Preference number: 5 (lower is better)
Translates to: VAVAHSQDSSQELRAPTVNVLSQ*LTAKTV
Trigger: AACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT...AACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TGTCGCAGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTAATGTTTTGTCGCAGTaGCTCACAGCCAAGACAGTT +
Preference number: 5 (lower is better)
Translates to: CRSCSQPRQFTRASGSNSNVLSQ*LTAKTV
Trigger: AACTGTCTTGGCTGTGAGCAACTGCGACAAAACATT...ACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACTGCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCTTCCTTCAAAATGTTTaGTCGCAGTTGCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: LTAKTVHKSFGLQQFTKAFLQNV*SQLLTA
Trigger: GGCTGTGAGCAACTGCGACAAAACATTTTGAAGGAA...GGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCGCTACTCGTAAAGTTTaGGTATCCTTCAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: AHSQDSSQELRAPTVHQSATRKV*VSFRFI
Trigger: GATGAACCTGAAGGATACCAAAACTTTACGAGTAGC...GCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp CACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCAGGCTACTCGTAAAGTTTaGGTATCCTTCAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: HSQDSSQELRAPTVHQSQATRKV*VSFRFI
Trigger: GATGAACCTGAAGGATACCAAAACTTTACGAGTAGC...CTGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp AGGCCCACTGGCCGATTCTTCCTTAGACTTTGTCTTCTTCATTGGTTTAATTTTATCTCCTCCTTGGTCTaGGGGACGGCATGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RPTGRFFLRLCLLHWFNFISSLV*GTAWWW
Trigger: CCACCACCATGCCGTCCCCAAGACCAAGGAGGAGAT...AAAATTAAACCAATGAAGAAGACAAAGTCTAAGGAAGAATCGGCCAGTGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTAAAACAGTCTGTCTTCACTTGGAGGGACGTAGTGCAAAGCATAATTCCTCTCTTCTGGAGCCAGGCTaGGATTGGAGAAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SKTVCLHLEGRSAKHNSSLLEPG*DWRRVW
Trigger: CCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAAG...AGAGGAATTATGCTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAAGCCATTCCTTCAAAATGTTTaGTCGCAGTTGCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: SQPRQFTRASGSNSSPKPFLQNV*SQLLTA
Trigger: GGCTGTGAGCAACTGCGACAAAACATTTTGAAGGAA...TGGCTTTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp GTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCAAACAACCCCCAAAATGTaGATGATGACGCAACATGGT +
Preference number: 5 (lower is better)
Translates to: VAHSQDSSQELRAPTVHQTTPKM*MMTQHG
Trigger: ACCATGTTGCGTCATCATCAACATTTTGGGGGTTGT...TTGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTTCGTTCCGCCTGGTGTaGGAAGAGACAGGCATGGGT +
Preference number: 5 (lower is better)
Translates to: QAFLISVSTQLMNHENQPSFRLV*EETGMG
Trigger: ACCCATGCCTGTCTCTTCCAACACCAGGCGGAACGA...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp GCAAAGCATAATTCCTCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACCTTTCCCATTGCGTTaGGGCAAGGTACTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AKHNSSVSEETMNALLAQPFPLR*GKVLPL
Trigger: CAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGG...TTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGAGGAATTATGCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS GCA 90 bp CTCTTATGTAGGTCTTGGTGGCAGGCTTCAGCTGCTTGGAGACAATaGTGTTGTTCTCAATGTACCTTTTGTAGATCGCTTTGGCTACTC +
Preference number: 5 (lower is better)
Translates to: LLCRSWWQASAAWRQ*CCSQCTFCRSLWLL
Trigger: GAGTAGCCAAAGCGATCTACAAAAGGTACATTGAGAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCACCAAGACCTACATAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000618960.4
CDS-3UTR CAA 90 bp AGTTGCTCACAGCCAAGACAGTTCACAAGAGCTTCGGGCTCCAACAGTTCACCATTGGAGACAATGCTGTaGTTCTCAATGTACCTTTTG +
Preference number: 5 (lower is better)
Translates to: SCSQPRQFTRASGSNSSPLETML*FSMYLL
Trigger: CAAAAGGTACATTGAGAACAACAGCATTGTCTCCAA...TGGTGAACTGTTGGAGCCCGAAGCTCTTGTGAACTGTCTTGGCTGTGAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS-3UTR CAA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTACGGGCTGTTACTGAGTaGCCAGGACCTTATCAAAGC +
Preference number: 5 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLRAVTE*PGPYQS
Trigger: GCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCG...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp CAGGCTTTTCTTATCTCAGTCAGTACCCAGCTCATGAATCATGAAAATCAACCTAAAACAAGGGAAAGCTaGAGCCCTCAATATAGGGCG +
Preference number: 5 (lower is better)
Translates to: QAFLISVSTQLMNHENQPKTRES*SPQYRA
Trigger: CGCCCTATATTGAGGGCTCAAGCTTTCCCTTGTTTT...AGGTTGATTTTCATGATTCATGAGCTGGGTACTGACTGAGATAAGAAAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp ATCAGTAAGGATTCCTGTTCAGGTAAGCTATACACAGTTTCTCTTAGTTTATGGACAGTCTGTCTTCACTaGGAGGGACGTAGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: ISKDSCSGKLYTVSLSLWTVCLH*EGRSAK
Trigger: CTTTGCACTACGTCCCTCCAAGTGAAGACAGACTGT...CCATAAACTAAGAGAAACTGTGTATAGCTTACCTGAACAGGAATCCTTACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TCTGTTAGTGAAGAAACCATGAACGCACTCCTAGCTCAACTCCTAAGTTTAGTCTTGGAGACAATGCTGTaGTTCTCAATGTACCTTTTG +
Preference number: 5 (lower is better)
Translates to: SVSEETMNALLAQLLSLVLETML*FSMYLL
Trigger: CAAAAGGTACATTGAGAACAACAGCATTGTCTCCAA...GACTAAACTTAGGAGTTGAGCTAGGAGTGCGTTCATGGTTTCTTCACTAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS-3UTR CAA 90 bp TGCAGGTACAGGTACTGTACTGATTTAAAGTCAAGCACTAGAGATAGTGGATTAACAACCCCCAAAATGTaGATGATGACGCAACATGGT +
Preference number: 5 (lower is better)
Translates to: CRYRYCTDLKSSTRDSGLTTPKM*MMTQHG
Trigger: ACCATGTTGCGTCATCATCAACATTTTGGGGGTTGT...TAATCCACTATCTCTAGTGCTTGACTTTAAATCAGTACAGTACCTGTACCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS CCA 72 bp TTGCCACCGGGCGGGAGCAGGGAGTGGTACTGCGAATaGTGGTGGTGGTGGTGGTCCGGGGAGCGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: LPPGGSREWYCE*WWWWWSGERER
Trigger: CCGCTCCCGCTCCCCGGACCACCACCACCACCACCATTCGCAGTACCACTCCCTGCTCCCGCCCGGTGGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CAA 90 bp CTGGCGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATTGCGTTaGGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGCTCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LAGRARPGSVPFPLR*GKVLPLLPPNCSLG
Trigger: GCCCAGCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 72 bp CGCTGCCCCCAGGGCAGAAGCAGTGCACCCGCTGCGTaGCCTCCGCCTCGATCTCCTCCTTGGTCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: RCPQGRSSAPAA*PPPRSPPWSWG
Trigger: TCCCCAAGACCAAGGAGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGGGGGCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CAA 72 bp GCGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATaGCGTTTGGGCAAGGTACTGCCTCTGCTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: AGRARPGSVPFP*RLGKVLPLLPP
Trigger: TGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CAA 90 bp CCTTCCCTGGCGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATaGCGTTTGGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGCTCG +
Preference number: 6 (lower is better)
Translates to: PSLAGRARPGSVPFP*RLGKVLPLLPPNCS
Trigger: CGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCGCCAGGGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS GCA 72 bp CGGGCAGGGCCAGGCCCGGCTCCGTGCCTTTCCCATTaGGTTTGGGCAAGGTACTGCCTCTGCTGCCGCCAA +
Preference number: 6 (lower is better)
Translates to: RAGPGPAPCLSH*VWARYCLCCRQ
Trigger: TTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCTGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CAA 72 bp TGGACATGCTTCGTCGTCTGCTTGGTCACAAAGCCTTaGCCCCCGAGGAGGGGGCAGGCGCCCGGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: WTCFVVCLVTKP*PPRRGQAPGEA
Trigger: CGCCTCGCCGGGCGCCTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGCATGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 72 bp TACTCGCTGCCCCCAGGGCAGAAGCAGTGCACCCGCTaGGTGGCCTCCGCCTCGATCTCCTCCTTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: YSLPPGQKQCTR*VASASISSLVL
Trigger: CAAGACCAAGGAGGAGATCGAGGCGGAGGCCACGCAGCGGGTGCACTGCTTCTGCCCTGGGGGCAGCGAGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CAA 72 bp GAGAGGGGGTGCTGCGTGGGCGCCCCCTCCCGCGAATaGAGTGTGAGCTCGGAGCCCTCTCTCTCTTCATCC +
Preference number: 6 (lower is better)
Translates to: ERGCCVGAPSRE*SVSSEPSLSSS
Trigger: GGATGAAGAGAGAGAGGGCTCCGAGCTCACACTCAATTCGCGGGAGGGGGCGCCCACGCAGCACCCCCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GCACCCGCTGCGTGGCCTCCGCCTCGATCTCCTCCTTaGTCTTGGGGACGGCATGGTGGTGGATGTAGTGGT +
Preference number: 6 (lower is better)
Translates to: APAAWPPPRSPP*SWGRHGGGCSG
Trigger: ACCACTACATCCACCACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGGCGGAGGCCACGCAGCGGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GGGCCAGGCCCGGCTCCGTGCCTTTCCCATTGCGTTTaGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: GPGPAPCLSHCV*ARYCLCCRQTA
Trigger: AGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CAA 72 bp AGGGCCAGGCCCGGCTCCGTGCCTTTCCCATTGCGTTaGGGCAAGGTACTGCCTCTGCTGCCGCCAAACTGC +
Preference number: 6 (lower is better)
Translates to: RARPGSVPFPLR*GKVLPLLPPNC
Trigger: GCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGCCGGGCCTGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 72 bp GCTGCGTGGCCTCCGCCTCGATCTCCTCCTTGGTCTTaGGGACGGCATGGTGGTGGATGTAGTGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: AAWPPPRSPPWS*GRHGGGCSGGG
Trigger: TCCACCACCACTACATCCACCACCATGCCGTCCCCAAGACCAAGGAGGAGATCGAGGCGGAGGCCACGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 72 bp GCTCCGTGCCTTTCCCATTGCGTTTGGGCAAGGTACTaGCTCTGCTGCCGCCAAACTGCTCGCTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: APCLSHCVWARY*LCCRQTARWAW
Trigger: CCATGCCCAGCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGCCCAAACGCAATGGGAAAGGCACGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS GCA 72 bp TTGGGCTTGCTCTGCCGCTCACTCTCCAGCATCCACTaGCAGACATCCTGCGACCTGTCTCCTTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LGLLCRSLSSIH*QTSCDLSPSSR
Trigger: CCGGGAGGAAGGAGACAGGTCGCAGGATGTCTGGCAGTGGATGCTGGAGAGTGAGCGGCAGAGCAAGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 72 bp CTGCAAAGGTGGCGGGTTCCACGGGGGTCATCTCCTTaGGCAGGCGGTGGGTTCTCGGGAAATGAGGTAGAG +
Preference number: 6 (lower is better)
Translates to: LQRWRVPRGSSP*AGGGFSGNEVE
Trigger: CTCTACCTCATTTCCCGAGAACCCACCGCCTGCCCAAGGAGATGACCCCCGTGGAACCCGCCACCTTTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GCTTTTCCAGCCTCGAGATCAGCTCAGCTGCAAAGGTaGCGGGTTCCACGGGGGTCATCTCCTTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: AFPASRSAQLQR*RVPRGSSPWAG
Trigger: GCCTGCCCAAGGAGATGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGCTGATCTCGAGGCTGGAAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 72 bp AGCCAGACCCCAGGGCTCAATCGATCCGCTCCACTTTaGCCAGAATCCGGCCTTCATACATCGGGAGCACCG +
Preference number: 6 (lower is better)
Translates to: SQTPGLNRSAPL*PESGLHTSGAP
Trigger: CGGTGCTCCCGATGTATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGATTGAGCCCTGGGGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GGATGTAGTGGTGGTGGACATGCTTCGTCGTCTGCTTaGTCACAAAGCCTTTGCCCCCGAGGAGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GCSGGGHASSSA*SQSLCPRGGGR
Trigger: CCTGCCCCCTCCTCGGGGGCAAAGGCTTTGTGACCAAGCAGACGACGAAGCATGTCCACCACCACTACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GCAAGGTACTGCCTCTGCTGCCGCCAAACTGCTCGCTaGGCATGGTTTCCGGAGCCTTGGAGTGGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: ARYCLCCRQTAR*AWFPEPWSGFC
Trigger: GCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGCGGCAGCAGAGGCAGTACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS GCA 72 bp CCGTGGACCTCACACTCGCCGTGGCCCTCAGAGTTTTaGTGGACAAGCCAACCACGGTTGGCGAAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: PWTSHSPWPSEF*WTSQPRLAKVC
Trigger: GCAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CAA 72 bp AAGCCAGACCCCAGGGCTCAATCGATCCGCTCCACTTaGCCCAGAATCCGGCCTTCATACATCGGGAGCACC +
Preference number: 6 (lower is better)
Translates to: KPDPRAQSIRST*PRIRPSYIGST
Trigger: GGTGCTCCCGATGTATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGATTGAGCCCTGGGGTCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CAA 90 bp AGTTCACCAAAGCCAGACCCCAGGGCTCAATCGATCCGCTCCACTTaGCCCAGAATCCGGCCTTCATACATCGGGAGCACCGTCTCATCC +
Preference number: 6 (lower is better)
Translates to: SSPKPDPRAQSIRST*PRIRPSYIGSTVSS
Trigger: GGATGAGACGGTGCTCCCGATGTATGAAGGCCGGATTCTGGGCAAAGTGGAGCGGATCGATTGAGCCCTGGGGTCTGGCTTTGGTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS TCA 72 bp GTCTCTCTGTCTCTCTCAAGTCAGCAGGGGCTCATCTaGACCTCCTCTCTGGAAGACGAAGGCCGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: VSLSLSSQQGLI*TSSLEDEGRRS
Trigger: GCTTCGGCGGCCTTCGTCTTCCAGAGAGGAGGTTCAGATGAGCCCCTGCTGACTTGAGAGAGACAGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585045.1
ENST00000611991.1
CDS GCA 72 bp CAGCTTCAGCTTTTCCAGCCTCGAGATCAGCTCAGCTaGAAAGGTGGCGGGTTCCACGGGGGTCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: QLQLFQPRDQLS*KGGGFHGGHLL
Trigger: AAGGAGATGACCCCCGTGGAACCCGCCACCTTTGCAGCTGAGCTGATCTCGAGGCTGGAAAAGCTGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 72 bp TTTGTGCTTTGGGCACTATGGGGCTTGGGCTTGCTCTaGCGCTCACTCTCCAGCATCCACTGCCAGACATCC +
Preference number: 6 (lower is better)
Translates to: FVLWALWGLGLL*RSLSSIHCQTS
Trigger: GGATGTCTGGCAGTGGATGCTGGAGAGTGAGCGGCAGAGCAAGCCCAAGCCCCATAGTGCCCAAAGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 72 bp CACCGTCTTGATCGCCCAATAAGGAGTGTAAGGACTTaGTCCACCGGGTCAGAGGGGAATCCGGAGATGCCC +
Preference number: 6 (lower is better)
Translates to: HRLDRPIRSVRT*STGSEGNPEMP
Trigger: GGGCATCTCCGGATTCCCCTCTGACCCGGTGGACCAAGTCCTTACACTCCTTATTGGGCGATCAAGACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000544103.2
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000611991.1
ENST00000618960.4
CDS CCA 72 bp CACTGTCAACAGTTTCCGTGGACCTCACACTCGCCGTaGCCCTCAGAGTTTTGCTGGACAAGCCAACCACGG +
Preference number: 6 (lower is better)
Translates to: HCQQFPWTSHSP*PSEFCWTSQPR
Trigger: CCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCACGGAAACTGTTGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CCA 72 bp TACTGCCTCTGCTGCCGCCAAACTGCTCGCTGGGCATaGTTTCCGGAGCCTTGGAGTGGCTTTTGCATTTCG +
Preference number: 6 (lower is better)
Translates to: YCLCCRQTARWA*FPEPWSGFCIS
Trigger: CGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGCGGCAGCAGAGGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CAA 72 bp TCCGTGGACCTCACACTCGCCGTGGCCCTCAGAGTTTaGCTGGACAAGCCAACCACGGTTGGCGAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: SVDLTLAVALRV*LDKPTTVGESL
Trigger: CAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CAA 90 bp TCTGAGGGGTTATTTTTATTTCCCGGCTCTCGGGCTGTTACTGAGTaGCCAGGACCTTATCAAAGCGCAGCCGGCTCCAGCCGACTCCCC +
Preference number: 6 (lower is better)
Translates to: SEGLFLFPGSRAVTE*PGPYQSAAGSSRLP
Trigger: GGGGAGTCGGCTGGAGCCGGCTGCGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAGCCGGGAAATAAAAATAACCCCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS TCA 72 bp GTCTCTCTGTCTCTCTCAAGTCAGCAGGGGCTCATCTaGACCTCCTCTCTTTTACAGCAGGGCCTTCGGCGG +
Preference number: 6 (lower is better)
Translates to: VSLSLSSQQGLI*TSSLLQQGLRR
Trigger: CCGCCGAAGGCCCTGCTGTAAAAGAGAGGAGGTTCAGATGAGCCCCTGCTGACTTGAGAGAGACAGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS TCA 72 bp GTCTCTCTGTCTCTCTCAAGTCAGCAGGGGCTCATCTaGACCTCCTCTATCCATAACCGCGACAGCGACGCG +
Preference number: 6 (lower is better)
Translates to: VSLSLSSQQGLI*TSSIHNRDSDA
Trigger: CGCGTCGCTGTCGCGGTTATGGATAGAGGAGGTTCAGATGAGCCCCTGCTGACTTGAGAGAGACAGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577278.1
CDS GCA 72 bp CGCTGGGCATGGTTTCCGGAGCCTTGGAGTGGCTTTTaGATTTCGAGTAGCAGTAATACTCGCTGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: RWAWFPEPWSGF*ISSSSNTRCPQ
Trigger: CTGGGGGCAGCGAGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp TGGACCTCACACTCGCCGTGGCCCTCAGAGTTTTGCTaGACAAGCCAACCACGGTTGGCGAAAGTTTGCACT +
Preference number: 6 (lower is better)
Translates to: WTSHSPWPSEFC*TSQPRLAKVCT
Trigger: AGTGCAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CCA 72 bp TTGGATTGGAGAAGGGTGTGGCTCCCGTCTGAACAGTaGCCGAATGATTCCTGTCCCTCTGCTGACTGGCCA +
Preference number: 6 (lower is better)
Translates to: LDWRRVWLPSEQ*PNDSCPSADWP
Trigger: TGGCCAGTCAGCAGAGGGACAGGAATCATTCGGCCACTGTTCAGACGGGAGCCACACCCTTCTCCAATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000578251.1
ENST00000618960.4
CDS CCA 72 bp TTGGCTCTTTGTGATCTTCTGGAGCCAGGCTTGGATTaGAGAAGGGTGTGGCTCCCGTCTGAACAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: LALCDLLEPGLD*RRVWLPSEQWP
Trigger: CGGCCACTGTTCAGACGGGAGCCACACCCTTCTCCAATCCAAGCCTGGCTCCAGAAGATCACAAAGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000578251.1
ENST00000618960.4
CDS CCA 72 bp AGAAAAAGCACAGAAAGCAGCAGCCTAGTCCAGAAATaGCGACGCGCGGAGTCTCTGCCTCTCCGCAAAAGG +
Preference number: 6 (lower is better)
Translates to: RKSTESSSLVQK*RRAESLPLRKR
Trigger: CCTTTTGCGGAGAGGCAGAGACTCCGCGCGTCGCCATTTCTGGACTAGGCTGCTGCTTTCTGTGCTTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585045.1
ENST00000611991.1
CDS CAA 90 bp TCAACAGTTTCCGTGGACCTCACACTCGCCGTGGCCCTCAGAGTTTaGCTGGACAAGCCAACCACGGTTGGCGAAAGTTTGCACTTGAAG +
Preference number: 6 (lower is better)
Translates to: STVSVDLTLAVALRV*LDKPTTVGESLHLK
Trigger: CTTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCCACGGCGAGTGTGAGGTCCACGGAAACTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS GCA 72 bp TATTTTTATTTCCCGGCTCTCGGGCTGTTACTGAGTTaGCAGGACCTTATCAAAGCGCAGCCGGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: YFYFPALGLLLS*QDLIKAQPAPA
Trigger: GGCTGGAGCCGGCTGCGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAGCCGGGAAATAAAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS CCA 72 bp AGTCGGCACAAGTCCACTCCTCTTCTTCATTCAAGGTaGGGAGATAGCCACACACGACCTTTAGGCTCCCGA +
Preference number: 6 (lower is better)
Translates to: SRHKSTPLLHSR*GDSHTRPLGSR
Trigger: TCGGGAGCCTAAAGGTCGTGTGTGGCTATCTCCCCACCTTGAATGAAGAAGAGGAGTGGACTTGTGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CCA 72 bp GGCCCTCAGAGTTTTGCTGGACAAGCCAACCACGGTTaGCGAAAGTTTGCACTTGAAGTCGGCACAAGTCCA +
Preference number: 6 (lower is better)
Translates to: GPQSFAGQANHG*RKFALEVGTSP
Trigger: TGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTGTCCAGCAAAACTCTGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CCA 72 bp CGCCAAACTGCTCGCTGGGCATGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCGAGTAGCAGTAATACT +
Preference number: 6 (lower is better)
Translates to: RQTARWAWFPEP*SGFCISSSSNT
Trigger: AGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307078.10
CDS CCA 72 bp TTTTTGTGCTTTGGGCACCAAACTGCTCGCTGGGCATaGTTTCCGGAGCCTTGGAGTGGCTTTTGCATTTCG +
Preference number: 6 (lower is better)
Translates to: FLCFGHQTARWA*FPEPWSGFCIS
Trigger: CGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGTGCCCAAAGCACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375702.5
ENST00000618960.4
CDS CAA 72 bp TTATTTTTATTTCCCGGCTCTCGGGCTGTTACTGAGTaGCCAGGACCTTATCAAAGCGCAGCCGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LFLFPGSRAVTE*PGPYQSAAGSS
Trigger: GCTGGAGCCGGCTGCGCTTTGATAAGGTCCTGGCAACTCAGTAACAGCCCGAGAGCCGGGAAATAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307078.10
ENST00000618960.4
CDS GCA 72 bp GGTAGAGACACTTGGCCATTGGCCTTCACACTGCGATaGATTTCTCTCTGGAGCTGTTTCTTACTGCCCACA +
Preference number: 6 (lower is better)
Translates to: GRDTWPLAFTLR*ISLWSCFLLPT
Trigger: TGTGGGCAGTAAGAAACAGCTCCAGAGAGAAATGCATCGCAGTGTGAAGGCCAATGGCCAAGTGTCTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp CACCAAACTGCTCGCTGGGCATGGTTTCCGGAGCCTTaGAGTGGCTTTTGCATTTCGAGTAGCAGTAATACT +
Preference number: 6 (lower is better)
Translates to: HQTARWAWFPEP*SGFCISSSSNT
Trigger: AGTATTACTGCTACTCGAAATGCAAAAGCCACTCCAAGGCTCCGGAAACCATGCCCAGCGAGCAGTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375702.5
ENST00000618960.4
CDS TCA 72 bp TGGACAAGCCAACCACGGTTGGCGAAAGTTTGCACTTaGAGTCGGCACAAGTCCACTCCTCTTCTTCATTCA +
Preference number: 6 (lower is better)
Translates to: WTSQPRLAKVCT*SRHKSTPLLHS
Trigger: TGAATGAAGAAGAGGAGTGGACTTGTGCCGACTTCAAGTGCAAACTTTCGCCAACCGTGGTTGGCTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000618960.4
CDS CCA 72 bp GAGGAATTCCATCTACACTGCTGTCCGTCATGGACATaGAATCATCCGTCAGCGCATCACTGGATATCTCAC +
Preference number: 6 (lower is better)
Translates to: EEFHLHCCPSWT*NHPSAHHWISH
Trigger: GTGAGATATCCAGTGATGCGCTGACGGATGATTCCATGTCCATGACGGACAGCAGTGTAGATGGAATTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS CCA 72 bp GATAAGGAGGAATTCCATCTACACTGCTGTCCGTCATaGACATGGAATCATCCGTCAGCGCATCACTGGATA +
Preference number: 6 (lower is better)
Translates to: DKEEFHLHCCPS*TWNHPSAHHWI
Trigger: TATCCAGTGATGCGCTGACGGATGATTCCATGTCCATGACGGACAGCAGTGTAGATGGAATTCCTCCTTATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000618960.4
CDS GCA 72 bp AGGTCTTGGTGGCAGGCTTCAGCTGCTTGGAGACAATaGTGTTGTTCTCAATGTACCTTTTGTAGATCGCTT +
Preference number: 6 (lower is better)
Translates to: RSWWQASAAWRQ*CCSQCTFCRSL
Trigger: AAGCGATCTACAAAAGGTACATTGAGAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCACCAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000618960.4
CDS CCA 72 bp CTCTTATGTAGGTCTTGGTGGCAGGCTTCAGCTGCTTaGAGACAATGCTGTTGTTCTCAATGTACCTTTTGT +
Preference number: 6 (lower is better)
Translates to: LLCRSWWQASAA*RQCCCSQCTFC
Trigger: ACAAAAGGTACATTGAGAACAACAGCATTGTCTCCAAGCAGCTGAAGCCTGCCACCAAGACCTACATAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000618960.4
CDS CCA 72 bp TGCTGTTGTTCTCAATGTACCTTTTGTAGATCGCTTTaGCTACTCGTAAAGTTTTGGTATCCTTCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: CCCSQCTFCRSL*LLVKFWYPSGS
Trigger: TGAACCTGAAGGATACCAAAACTTTACGAGTAGCCAAAGCGATCTACAAAAGGTACATTGAGAACAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307078.10
ENST00000375702.5
ENST00000544103.2
ENST00000577278.1
ENST00000580513.1
ENST00000585045.1
ENST00000618960.4