RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AXDND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162779

Ensembl transcript IDs: ENST00000367618.8, ENST00000434088.1, ENST00000461179.2, ENST00000484455.1, ENST00000484883.1, ENST00000489080.1, ENST00000507383.5, ENST00000508229.5, ENST00000508285.2, ENST00000509175.5, ENST00000510593.5, ENST00000511157.5, ENST00000511889.5, ENST00000617277.4

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATAATGTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATaGCCACCAGGGTTTAGGCATGCTCTCCTCCCACCTGGAGGCTCC +
Preference number: 1 (lower is better)
Translates to: NNVLSKGMLFLSTEQ*PPGFRHALLPPGGS
Trigger: GGAGCCTCCAGGTGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGACATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR GCA 90 bp TCAATTACAGCCATTGCTTCAAGATATTTTTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAAT +
Preference number: 1 (lower is better)
Translates to: SITAIASRYFWANVP*LADSLQEDNTSVSN
Trigger: ATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCAATGGCTGTAATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR TCA 90 bp ATCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTaGAGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTT +
Preference number: 1 (lower is better)
Translates to: IFSNESNEFFLLCRC*RLFFCSLFIFLLKF
Trigger: AAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR GCA 90 bp TTAAATATATACGCTTGGAGTACCGAAACAGAATCCACATCTATGTaGTGTGGAACAATACCAGTAAGGTTTAACAATATATCCAAGTGT +
Preference number: 1 (lower is better)
Translates to: LNIYAWSTETESTSM*CGTIPVRFNNISKC
Trigger: ACACTTGGATATATTGTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSWANVP*LADSLQ
Trigger: CTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCACCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPAPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp TTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCATACCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: FSSACLALFSTSSNFSCIPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...TATGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTGTACCTTGCTTAGCTaGCTCTCTCCAGGAAGACAA +
Preference number: 2 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLCTLLS*LSPGRQ
Trigger: TTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTCCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTTCAAACTTCTCCTCTaGCTGTCTGGCTCTATTTTC +
Preference number: 2 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSFKLLL*LSGSIF
Trigger: GAAAATAGAGCCAGACAGGCAGAGGAGAAGTTTGAA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 2 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTCAAACTTCTCCTCTaGCTGTCTGGCTCTATTTTC +
Preference number: 2 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLFKLLL*LSGSIF
Trigger: GAAAATAGAGCCAGACAGGCAGAGGAGAAGTTTGAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCCTTTCTTGATGTCATaGCTAATTCCTCTAGATCTT +
Preference number: 2 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSPFLMS*LIPLDL
Trigger: AAGATCTAGAGGAATTAGTCATGACATCAAGAAAGG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCAGTAACTTCTCCTaGATATGTTCAATTACAGCC +
Preference number: 2 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLSSNFS*ICSITA
Trigger: GGCTGTAATTGAACATATGCAGGAGAAGTTACTGGA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR CAA 90 bp CTTTGCAACAACTGCTCAAATAGCTGGAGTATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATAT +
Preference number: 2 (lower is better)
Translates to: LCNNCSNSWSIGTTS*SVQSHLAPIAQLLY
Trigger: ATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTTGTTGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 2 (lower is better)
Translates to: FWANVPCLADSLQEDNTSYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCATAAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 2 (lower is better)
Translates to: FSSACLALFSTSSNFSCINCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...TATGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTCTTTATTTTCCTCCTaGAGTTTCCTATCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: FWANVPCLADSLQEDNTSSLFSS*SFLSSL
Trigger: TAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCTTAGTACAGAACAATaGCCACCAGGGTTTAGGCAT +
Preference number: 2 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCLSTEQ*PPGFRH
Trigger: ATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTGGAGGACCAAATCCTaGAACCGGCAGTGCTATCTC +
Preference number: 2 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTWRTKS*NRQCYL
Trigger: GAGATAGCACTGCCGGTTCCAGGATTTGGTCCTCCA...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511157.5
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTTTTAGGAGACAGTCTTaGTCAGTAAAGTTGGGTATC +
Preference number: 2 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLFRRQS*SVKLGI
Trigger: GATACCCAACTTTACTGACCAAGACTGTCTCCTAAA...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCATCCATGTGGTGCTaGAGTTCAATGTTACCGTTG +
Preference number: 2 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTSSMWC*SSMLPL
Trigger: CAACGGTAACATTGAACTTCAGCACCACATGGATGA...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 2 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 2 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR TCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTTATTTTCCTCCTaGAGTTTCCTATCCTCCTTA +
Preference number: 2 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCSLFSS*SFLSSL
Trigger: TAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGA...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR GCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTGAATCCACATCTATGTaGTGTGGAACAATACCAGTA +
Preference number: 2 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTESTSM*CGTIPV
Trigger: TACTGGTATTGTTCCACAGCACATAGATGTGGATTC...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 2 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTNCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTGCTTCAAGATATTTTTaGGCCAATGTACCTTGCTTA +
Preference number: 2 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSASRYF*ANVPCL
Trigger: TAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGC...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CCA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTTTAAATATATACGCTTaGAGTACCGAAACAGAATCC +
Preference number: 2 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSLNIYA*STETES
Trigger: GGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTTGCACAGATATTTATaGGGTGGCACCATGCAAGTT +
Preference number: 3 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSLHRYL*GGTMQV
Trigger: AACTTGCATGGTGCCACCCAATAAATATCTGTGCAA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCACAAATAGCTGGAGTATaGGTACAACTTCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPAQIAGV*VQLPCQ
Trigger: CTGACAAGGAAGTTGTACCAATACTCCAGCTATTTG...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 3 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp TTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCATACAAATAGCTGGAGTATaGGTACAACTTCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: FSSACLALFSTSSNFSCIQIAGV*VQLPCQ
Trigger: CTGACAAGGAAGTTGTACCAATACTCCAGCTATTTG...TATGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR GCA 72 bp GCCATTGCTTCAAGATATTTTTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAGGAAGACAACACATCT +
Preference number: 3 (lower is better)
Translates to: AIASRYFWANVP*LADSLQEDNTS
Trigger: AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCTTTCAAAGGGAATGTaGTTCCTTAGTACAGAACAA +
Preference number: 3 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLLSKGM*FLSTEQ
Trigger: TTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 3 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTATTTACTCAGAGCCATaGCTGTTACCATCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLIYSEP*LLPSLC
Trigger: GCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAAT...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR GCA 72 bp TACGCTTGGAGTACCGAAACAGAATCCACATCTATGTaGTGTGGAACAATACCAGTAAGGTTTAACAATATA +
Preference number: 3 (lower is better)
Translates to: YAWSTETESTSM*CGTIPVRFNNI
Trigger: TATATTGTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGTACTCCAAGCGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR GCA 72 bp TGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTaGATATGTTCAATTACAGCCATTGCTTCAAGATAT +
Preference number: 3 (lower is better)
Translates to: CLALFSTSSNFS*ICSITAIASRY
Trigger: ATATCTTGAAGCAATGGCTGTAATTGAACATATGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp ATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTCTGCTATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTA +
Preference number: 3 (lower is better)
Translates to: MNRMSFSFSVDVEGCSSAIGTTS*SVQSHL
Trigger: TAGATGCGATTGAACTGACAAGGAAGTTGTACCAAT...AGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTTGCTTCAAGATATTTTaGGGCCAATGTACCTTGCTT +
Preference number: 3 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSCFKIF*GQCTLL
Trigger: AAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCA...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR-3UTR CAA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 3 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCGGCTGCCTTCAGCGGTaGCGGCGGAGGAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSGCLQR*RRRRET
Trigger: TGTCTCCCTCCTCCGCCGGCACCGCTGAAGGCAGCC...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR GCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCACTGGGACTTGCAGGCTaGCACATAGTCCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPALGLAG*HIVPPS
Trigger: GCTGGGCGGGACTATGTGGCAGCCTGCAAGTCCCAG...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCCC +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALRRTGT*RLPHSP
Trigger: GGGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCG...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTGAGTTAGTGGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAAGCCCTCCATAGGGGCTaGCTTCAGCGGTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: CELVDLLRAIAVTIPLQQALHRG*LQRCRR
Trigger: CCGCCGGCACCGCTGAAGGCAGCCCCTATGGAGGGC...TTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCCACTAACTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCCCTTCCAGCTCCTGTaGGGGAGACGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSPFQLL*GRRDGQ
Trigger: TTGACCATCCCGTCTCCCTCACAGGAGCTGGAAGGG...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCCCTTCCAGCTCCTGTaGGGGAGACGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLPFQLL*GRRDGQ
Trigger: TTGACCATCCCGTCTCCCTCACAGGAGCTGGAAGGG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCAAATCAGCGCCGCACTaGGACTTGCAGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSKSAPH*DLQAAT
Trigger: TGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVSSIASSSNRATPISCFRRTGT*RLPHSP
Trigger: GGGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCG...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTCCCTTCCAGCTCCTGTaGGGGAGACGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFPFQLL*GRRDGQ
Trigger: TTGACCATCCCGTCTCCCTCACAGGAGCTGGAAGGG...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCATGTACTGTCGCTCTaGTGGCATCTCCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSHVLSL*WHLPLQ
Trigger: TTGGAGGGGGAGATGCCATCAGAGCGACAGTACATG...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCATGTGGGGGACAAACTaGCTTCTCCCTAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSMWGTN*LLPSLS
Trigger: GGACAGACTAGGGAGAAGGCAGTTTGTCCCCCACAT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCCT +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFRRTGT*RLPHSP
Trigger: AGGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCG...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAATGGTCTACAAGGCGTaGAAGAGTGCCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPMVYKA*KSALWG
Trigger: ACCCCAAAGGGCACTCTTCCACGCCTTGTAGACCAT...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCATGGTCTACAAGGCGTaGAAGAGTGCCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSMVYKA*KSALWG
Trigger: ACCCCAAAGGGCACTCTTCCACGCCTTGTAGACCAT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCGGTCCTGTATATTCCTaGTTTTCCACACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSGPVYS*FSTPAL
Trigger: GAGGGCTGGTGTGGAAAATCAGGAATATACAGGACC...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCTGGGACTTGCAGGCTaGCACATAGTCCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCLGLAG*HIVPPS
Trigger: GCTGGGCGGGACTATGTGGCAGCCTGCAAGTCCCAG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000617277.4
CDS-3UTR GCA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAATCCTACCCACACATTaGGTACCCGCCCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERILPTH*VPAQHP
Trigger: CGGATGCTGGGCGGGTACGCAATGTGTGGGTAGGAT...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR GCA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGACTGGGACTTGCAGGCTaGCACATAGTCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERLGLAG*HIVLPH
Trigger: GTGGGGAAGGACTATGTGGCAGCCTGCAAGTCCCAG...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCCCTTCCAGCTCCTGTaGGGGAGACGGGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCPFQLL*GRRDGQ
Trigger: TTGACCATCCCGTCTCCCTCACAGGAGCTGGAAGGG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAGCTTATGGGGCACAATaGCACCATCATGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPAYGAQ*HHHVTV
Trigger: TACAGTCACATGATGGTGTCATTGTGCCCCATAAGC...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCGGTCCTGTATATTCCTaGTTTTCCACACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLGPVYS*FSTPAL
Trigger: GAGGGCTGGTGTGGAAAATCAGGAATATACAGGACC...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGGTCCTGTATATTCCTaGTTTTCCACACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSGPVYS*FSTPAL
Trigger: GAGGGCTGGTGTGGAAAATCAGGAATATACAGGACC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCATGTACCTTGCTTAGCTaGCTCTCTCCAGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPCTLLS*LSPGRQ
Trigger: TTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACA...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSWANVP*LADSLQ
Trigger: CTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALWANVP*LADSLQ
Trigger: CTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTGGGCCAATGTACCTTaGTTAGCTGACTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLWANVP*LADSLQ
Trigger: CTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGACAAGGACCAGCATTaGCCGCATAGGTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSDKDQH*PHRSEK
Trigger: TTTCTCTGACCTATGCGGCCAATGCTGGTCCTTGTC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCGGGCCAATTCATATGTaGCTGAGCTCCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSGPIHM*LSSRYL
Trigger: GAGATATCTGGAGCTCAGCCACATATGAATTGGCCC...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTGGAGGACCAAATCCTaGAACCGGCAGTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSWRTKS*NRQCYL
Trigger: GAGATAGCACTGCCGGTTCCAGGATTTGGTCCTCCA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR TCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAGGAATGAACTCATTCTaGAGGGAAGTAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPGMNSF*REVGRS
Trigger: ACTCCTTCCTACTTCCCTTCAGAATGAGTTCATTCC...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCTTCTTTCCACAGGTTaGCTTGGATTCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSLLSTG*LGFSDL
Trigger: AAGGTCACTGAATCCAAGGCAACCTGTGGAAAGAAG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTAAATCAGCGCCGCACTaGGACTTGCAGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLKSAPH*DLQAAT
Trigger: TGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTT...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTTCCTTCGAACAGGGTaGTGCCAGACATGGTCTACA +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFFLRTG*CQTWST
Trigger: TGTAGACCATGTCTGGCATCACCCTGTTCGAAGGAA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAATTCATATGTGGCTaGGCTCCAGATATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSQFICG*APDISF
Trigger: GAAAGAGATATCTGGAGCTCAGCCACATATGAATTG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCATGTACTGTCGCTCTaGTGGCATCTCCCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCHVLSL*WHLPLQ
Trigger: TTGGAGGGGGAGATGCCATCAGAGCGACAGTACATG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCATCCATGTGGTGCTaGAGTTCAATGTTACCGTTG +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLSSMWC*SSMLPL
Trigger: CAACGGTAACATTGAACTTCAGCACCACATGGATGA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCATCCATGTGGTGCTaGAGTTCAATGTTACCGTTG +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSSSMWC*SSMLPL
Trigger: CAACGGTAACATTGAACTTCAGCACCACATGGATGA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTAAGTTCTCCTCTGTCTaGACAGTCCACACTGACTTG +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSKFSSV*TVHTDL
Trigger: CAAGTCAGTGTGGACTGTGCAGACAGAGGAGAACTT...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATAGCTCACTTCCTCCTTTaGTGGAACGCCTGTTTGTCG +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIAHFLL*WNACLS
Trigger: CGACAAACAGGCGTTCCAGCAAAGGAGGAAGTGAGC...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR CCA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTAAATCAGCGCCGCACTaGGACTTGCAGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLKSAPH*DLQAAT
Trigger: TGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTT...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATAATGGTCTACAAGGCGTaGAAGAGTGCCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIMVYKA*KSALWG
Trigger: ACCCCAAAGGGCACTCTTCCACGCCTTGTAGACCAT...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCGTGAGGGAGACGGGATaGTCAATCAGGTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLVRETG*SIRYLN
Trigger: ATTCAAATACCTGATTGACCATCCCGTCTCCCTCAC...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCGTGAGGGAGACGGGATaGTCAATCAGGTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALVRETG*SIRYLN
Trigger: ATTCAAATACCTGATTGACCATCCCGTCTCCCTCAC...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCAGTGAGGGAGACGGGATaGTCAATCAGGTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPAVRETG*SIRYLN
Trigger: ATTCAAATACCTGATTGACCATCCCGTCTCCCTCAC...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCAGTGTCTTTGGCTTATaGGGCACAATGACACCATCA +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLSVFGL*GTMTPS
Trigger: TGATGGTGTCATTGTGCCCCATAAGCCAAAGACACT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCAAGTGTCTTTGGCTTATaGGGCACAATGACACCATCA +
Preference number: 4 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPASVFGL*GTMTPS
Trigger: TGATGGTGTCATTGTGCCCCATAAGCCAAAGACACT...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCATCTGCCGAGCAATCTaGTCAAGCATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLICRAI*SSICTY
Trigger: GTATGTGCAAATGCTTGACCAGATTGCTCGGCAGAT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCTTAGTACAGAACAATaGCCACCAGGGTTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLLSTEQ*PPGFRH
Trigger: ATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGACACTTCCTCCTTTGCTaGAACGCCTGTTTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERHFLLC*NACLSS
Trigger: TGACGACAAACAGGCGTTCCAGCAAAGGAGGAAGTG...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCGAACTTCTTTGGGAATaGACTCATTCTGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLELLWE*THSEGK
Trigger: CTTCCCTTCAGAATGAGTTCATTCCCAAAGAAGTTC...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATATTCCTTCGAACAGGGTaGTGCCAGACATGGTCTACA +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIFLRTG*CQTWST
Trigger: TGTAGACCATGTCTGGCATCACCCTGTTCGAAGGAA...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTGCTTATGGGGCACAATaGCACCATCATGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFAYGAQ*HHHVTV
Trigger: TACAGTCACATGATGGTGTCATTGTGCCCCATAAGC...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATAGGTCCTGTATATTCCTaGTTTTCCACACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIGPVYS*FSTPAL
Trigger: GAGGGCTGGTGTGGAAAATCAGGAATATACAGGACC...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCAATTCATATGTGGCTaGGCTCCAGATATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLQFICG*APDISF
Trigger: GAAAGAGATATCTGGAGCTCAGCCACATATGAATTG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCTTCTCTGTAGATGTTaGAGGTTGTTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSLLCRC*RLFFCS
Trigger: AGAGCAGAAGAACAACCTTCAACATCTACAGAGAAG...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTGTACCTTGCTTAGCTaGCTCTCTCCAGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFCTLLS*LSPGRQ
Trigger: TTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TGTGAGTTAGTGGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CELVDLLRAIAVTIPLQQPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...TTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCCACTAACTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCATCTGGTCAAGCATTTaGACATACCTCTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLIWSSI*TYLSLT
Trigger: AGTCAGAGAGAGGTATGTGCAAATGCTTGACCAGAT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTCATTGAAGAACTCCTaGCATTTGATAAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALSLKNS*HLISPS
Trigger: GGATGGGCTTATCAAATGGCAGGAGTTCTTCAATGA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCGAATCCACATCTATGTaGTGTGGAACAATACCAGTA +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSESTSM*CGTIPV
Trigger: TACTGGTATTGTTCCACAGCACATAGATGTGGATTC...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTTTACTCAGAGCCATTaGTGTTACCATCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALFTQSH*CYHPFA
Trigger: TGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTTACTCAGAGCCATTaGTGTTACCATCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLFTQSH*CYHPFA
Trigger: TGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTCCAGTAACTTCTCCTaGATATGTTCAATTACAGCC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSSSNFS*ICSITA
Trigger: GGCTGTAATTGAACATATGCAGGAGAAGTTACTGGA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCATTCAAACTTCTCCTCTaGCTGTCTGGCTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPAFKLLL*LSGSIF
Trigger: GAAAATAGAGCCAGACAGGCAGAGGAGAAGTTTGAA...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTGAGTTAGTGGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAAGACAAGGACCAGCATTaGCCGCATAGGTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CELVDLLRAIAVTIPLQQDKDQH*PHRSEK
Trigger: TTTCTCTGACCTATGCGGCCAATGCTGGTCCTTGTC...TTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCCACTAACTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGATGGTCTACAAGGCGTaGAAGAGTGCCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARMVYKA*KSALWG
Trigger: ACCCCAAAGGGCACTCTTCCACGCCTTGTAGACCAT...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCATCACATCATTCAGCTaGGCCACTTCTACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSITSFS*ATSTLL
Trigger: TAAAAGAGTAGAAGTGGCCCAGCTGAATGATGTGAT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTGGGCCAATTCATATGTaGCTGAGCTCCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFGPIHM*LSSRYL
Trigger: GAGATATCTGGAGCTCAGCCACATATGAATTGGCCC...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSNCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTCTCCTCTGCCTGTCTaGCTCTATTTTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFSPLPV*LYFQPP
Trigger: TGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTCTCCTCTGCCTGTCTaGCTCTATTTTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGSPLPV*LYFQPP
Trigger: TGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GCTTGGAGTACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAGGAATGAACTCATTCTaGAGGGAAGTAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AWSTETESTSMCCGTIPVGMNSF*REVGRS
Trigger: ACTCCTTCCTACTTCCCTTCAGAATGAGTTCATTCC...TACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGTACTCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTTCCTTCGAACAGGGTaGTGCCAGACATGGTCTACA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCFLRTG*CQTWST
Trigger: TGTAGACCATGTCTGGCATCACCCTGTTCGAAGGAA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTCAATTCATATGTGGCTaGGCTCCAGATATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSQFICG*APDISF
Trigger: GAAAGAGATATCTGGAGCTCAGCCACATATGAATTG...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGGCAAGAGCATGTGTTaGTCCATTCATAACATTCTT +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSGKSMC*SIHNIL
Trigger: AAGAATGTTATGAATGGATCAACACATGCTCTTGCC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCGGCAAGAGCATGTGTTaGTCCATTCATAACATTCTT +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALGKSMC*SIHNIL
Trigger: AAGAATGTTATGAATGGATCAACACATGCTCTTGCC...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCATCTTTATTTTCCTCCTaGAGTTTCCTATCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPSLFSS*SFLSSL
Trigger: TAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGA...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCACCTTTCTTGATGTCATaGCTAATTCCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPPFLMS*LIPLDL
Trigger: AAGATCTAGAGGAATTAGTCATGACATCAAGAAAGG...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCTTCTCTGTAGATGTTaGAGGTTGCTTCAACTTATC +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSLLCRC*RLLQLI
Trigger: GATAAGTTGAAGCAACCTTCAACATCTACAGAGAAG...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434088.1
CDS-3UTR GCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCCTCCAAACTTTTATaGCGATTAAATATCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALPSKLL*RLNIPS
Trigger: GCTTGGGATATTTAATCGGCATAAAAGTTTGGAGGG...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR GCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGAATCCACATCTATGTaGTGTGGAACAATACCAGTA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSESTSM*CGTIPV
Trigger: TACTGGTATTGTTCCACAGCACATAGATGTGGATTC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCAGTAACTTCTCCTaGATATGTTCAATTACAGCC +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSSSNFS*ICSITA
Trigger: GGCTGTAATTGAACATATGCAGGAGAAGTTACTGGA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTCTTCTTTCCACAGGTTaGCTTGGATTCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFLLSTG*LGFSDL
Trigger: AAGGTCACTGAATCCAAGGCAACCTGTGGAAAGAAG...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTTTGGAGTAACCTTCTaGCACTGTTTGAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSFGVTF*HCLKSK
Trigger: TTTAGACTTCAAACAGTGGCAGAAGGTTACTCCAAA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCATCACATCATTCAGCTaGGCCACTTCTACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSITSFS*ATSTLL
Trigger: TAAAAGAGTAGAAGTGGCCCAGCTGAATGATGTGAT...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTATCTGCCGAGCAATCTaGTCAAGCATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFICRAI*SSICTY
Trigger: GTATGTGCAAATGCTTGACCAGATTGCTCGGCAGAT...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCAATCTGCCGAGCAATCTaGTCAAGCATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: NFLVSSIASSSNRATPISICRAI*SSICTY
Trigger: GTATGTGCAAATGCTTGACCAGATTGCTCGGCAGAT...TGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCCACATCTATGTGCTGTaGAACAATACCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLHIYVL*NNTSKV
Trigger: AACCTTACTGGTATTGTTCCACAGCACATAGATGTG...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTTAGGAGACAGTCTTaGTCAGTAAAGTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLFRRQS*SVKLGI
Trigger: GATACCCAACTTTACTGACCAAGACTGTCTCCTAAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTCACAAACTCGCGAGTTaGGCAGGCCTCGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTHKLAS*AGLALL
Trigger: AAGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTGTG...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CCA 90 bp ACTTCTCCTCTGCCTGTCTGGCTCTATTTTCAACCTCCAGTAACTTCTCCTGCAAACTTGGAAGAATTTTaGAGTAACCTTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TSPLPVWLYFQPPVTSPANLEEF*SNLLPL
Trigger: CAGTGGCAGAAGGTTACTCCAAAATTCTTCCAAGTT...TGCAGGAGAAGTTACTGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
3UTR CAA 72 bp AACTGCTCAAATAGCTGGAGTATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAA +
Preference number: 4 (lower is better)
Translates to: NCSNSWSIGTTS*SVQSHLAPIAQ
Trigger: TTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCAGTAGGAAGGAGTTTTaGACGATCCACCATATTTTT +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSSRKEF*TIHHIF
Trigger: AAAAATATGGTGGATCGTTCAAAACTCCTTCCTACT...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAGAACTTCTTTGGGAATaGACTCATTCTGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERELLWE*THSEGK
Trigger: CTTCCCTTCAGAATGAGTTCATTCCCAAAGAAGTTC...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTCCTTCGAACAGGGTaGTGCCAGACATGGTCTACA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFLRTG*CQTWST
Trigger: TGTAGACCATGTCTGGCATCACCCTGTTCGAAGGAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTGCTTATGGGGCACAATaGCACCATCATGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCAYGAQ*HHHVTV
Trigger: TACAGTCACATGATGGTGTCATTGTGCCCCATAAGC...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTGTACCTTGCTTAGCTaGCTCTCTCCAGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCCTLLS*LSPGRQ
Trigger: TTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCTTTCTTGATGTCATaGCTAATTCCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALPFLMS*LIPLDL
Trigger: AAGATCTAGAGGAATTAGTCATGACATCAAGAAAGG...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCACCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTAAGTTCTCCTCTGTCTaGACAGTCCACACTGACTTG +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCKFSSV*TVHTDL
Trigger: CAAGTCAGTGTGGACTGTGCAGACAGAGGAGAACTT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGAAGTTCTCCTCTGTCTaGACAGTCCACACTGACTTG +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARKFSSV*TVHTDL
Trigger: CAAGTCAGTGTGGACTGTGCAGACAGAGGAGAACTT...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCATTCAGGATCTTCTaGCACTGTTTGAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLSFRIF*HCLKSK
Trigger: TTTAGACTTCAAACAGTGGCAGAAGATCCTGAATGA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR GCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTTTACTCAGAGCCATTaGTGTTACCATCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGFTQSH*CYHPFA
Trigger: TGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTTCAAACTTCTCCTCTaGCTGTCTGGCTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFFKLLL*LSGSIF
Trigger: GAAAATAGAGCCAGACAGGCAGAGGAGAAGTTTGAA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATACTTCTTTCCACAGGTTaGCTTGGATTCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQILLSTG*LGFSDL
Trigger: AAGGTCACTGAATCCAAGGCAACCTGTGGAAAGAAG...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TGTGAGTTAGTGGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAAAGTGTCTTTGGCTTATaGGGCACAATGACACCATCA +
Preference number: 4 (lower is better)
Translates to: CELVDLLRAIAVTIPLQQSVFGL*GTMTPS
Trigger: TGATGGTGTCATTGTGCCCCATAAGCCAAAGACACT...TTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCCACTAACTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTTTGTGCATCTTCGTTaGTCCTGTATATTCCTGATT +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSFVHLR*SCIFLI
Trigger: AATCAGGAATATACAGGACCAACGAAGATGCACAAA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCAACTTGGAAGAATTTTaGAGTAACCATTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSNLEEF*SNHCPH
Trigger: ATGGGGACAATGGTTACTCCAAAATTCTTCCAAGTT...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR CCA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGCTTCAAGATATTTTTaGGCCAATGTACCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSASRYF*ANVPCL
Trigger: TAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAGCCTCGCACTGCTTCTTaGTTTAAAATGACGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSRGVSGNSRFSNLKEQKPRTAS*FKMTGK
Trigger: CTTTCCCGTCATTTTAAACCAAGAAGCAGTGCGAGG...CTTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTAACTTGGAAGAATTTTaGAGTAACCTTCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSNLEEF*SNLLPL
Trigger: CAGTGGCAGAAGGTTACTCCAAAATTCTTCCAAGTT...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTAGTAGGAAGGAGTTTTaGACGATCCACCATATTTTT +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSSRKEF*TIHHIF
Trigger: AAAAATATGGTGGATCGTTCAAAACTCCTTCCTACT...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGTCATCCATGTGGTGCTaGAGTTCAATGTTACCGTTG +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARSSMWC*SSMLPL
Trigger: CAACGGTAACATTGAACTTCAGCACCACATGGATGA...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATGTACCTTGCTTAGCTaGCTCTCTCCAGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFACTLLS*LSPGRQ
Trigger: TTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTCCTTTCTTGATGTCATaGCTAATTCCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSPFLMS*LIPLDL
Trigger: AAGATCTAGAGGAATTAGTCATGACATCAAGAAAGG...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTTGCCTTGGATTCAGTaGCCTTTCTTTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFLPWIQ*PFFGDF
Trigger: AAAATCTCCAAAGAAAGGTCACTGAATCCAAGGCAA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp ACAACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATTTGCCTTGGATTCAGTaGCCTTTCTTTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: TTSLSVQSHLAPIAQLLYLPWIQ*PFFGDF
Trigger: AAAATCTCCAAAGAAAGGTCACTGAATCCAAGGCAA...ATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTCCTGGAGGCTCCCACTaGCATCTGAATTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCPGGSH*HLNSSF
Trigger: GAAAGAAGAATTCAGATGTCAGTGGGAGCCTCCAGG...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAGATCTGGTCAAGCATTTaGACATACCTCTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SSRGVSGNSRFSNLKEQKIWSSI*TYLSLT
Trigger: AGTCAGAGAGAGGTATGTGCAAATGCTTGACCAGAT...CTTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATAACAATTCTTCTAAAATaGGCTGGTCCATCACTCGCT +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQITILLK*AGPSLA
Trigger: AGCGAGTGATGGACCAGCGCATTTTAGAAGAATTGT...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTTTTGTGTCAACTTCTaGAACAGTGCAAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGFCVNF*NSARSS
Trigger: TGAAGACCTTGCACTGTTGCAGAAGTTGACACAAAA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTCAATTACAGCCATTaGTTCAAGATATTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLFNYSH*FKIFLG
Trigger: GCCCAAAAATATCTTGAAGCAATGGCTGTAATTGAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCTTCTTTCCACAGGTTaGCTTGGATTCAGTGACCTT +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCLLSTG*LGFSDL
Trigger: AAGGTCACTGAATCCAAGGCAACCTGTGGAAAGAAG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CTAAAACATCTTGAGAGTAAGATTCCTACTACCACCATCTTCAGTCATAGTCCTTCCTGGAACCGGCAGTaGTATCTCTTCAACTTATCC +
Preference number: 4 (lower is better)
Translates to: LKHLESKIPTTTIFSHSPSWNRQ*YLFNLS
Trigger: GGATAAGTTGAAGAGATAGCACTGCCGGTTCCAGGA...AGGACTATGACTGAAGATGGTGGTAGTAGGAATCTTACTCTCAAGATGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTGGAAGAGTGCCCTTTaGGGTTTTAATTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFWKSAL*GFNFLR
Trigger: CCTAAGAAAATTAAAACCCCAAAGGGCACTCTTCCA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTGGAAGAGTGCCCTTTaGGGTTTTAATTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGWKSAL*GFNFLR
Trigger: CCTAAGAAAATTAAAACCCCAAAGGGCACTCTTCCA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTGTGAGGGAGACGGGATaGTCAATCAGGTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLVRETG*SIRYLN
Trigger: ATTCAAATACCTGATTGACCATCCCGTCTCCCTCAC...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGAGTGTCTTTGGCTTATaGGGCACAATGACACCATCA +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARSVFGL*GTMTPS
Trigger: TGATGGTGTCATTGTGCCCCATAAGCCAAAGACACT...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTATCTGCCGAGCAATCTaGTCAAGCATTTGCACATAC +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCICRAI*SSICTY
Trigger: GTATGTGCAAATGCTTGACCAGATTGCTCGGCAGAT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTCACATCTATGTGCTGTaGAACAATACCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFHIYVL*NNTSKV
Trigger: AACCTTACTGGTATTGTTCCACAGCACATAGATGTG...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTAAATATATACGCTTaGAGTACCGAAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLLNIYA*STETES
Trigger: GGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFNCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATCTCCTCTGCCTGTCTaGCTCTATTTTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFASPLPV*LYFQPP
Trigger: TGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCAATCCCTACACCCTCTTaGAGTTTCTTATGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: NFLVSSIASSSNRATPISIPTPS*SFLCSK
Trigger: CTTAGAACATAAGAAACTCCAAGAGGGTGTAGGGAT...TGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR TCA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAATCTCTTTAGTAATTTaGAATAGTCCTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERISLVI*NSPPES
Trigger: GCTTTCCGGAGGACTATTTCAAATTACTAAAGAGAT...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTTCTTCTGCCACTGTTTaGAGTCTAAAAGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFSSATV*SLKELN
Trigger: ATTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGA...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR TCA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTTCATCCATGTGGTGCTaGAGTTCAATGTTACCGTTG +
Preference number: 4 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLSSMWC*SSMLPL
Trigger: CAACGGTAACATTGAACTTCAGCACCACATGGATGA...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTAAGTTCTCCTCTGTCTaGACAGTCCACACTGACTTG +
Preference number: 4 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCKFSSV*TVHTDL
Trigger: CAAGTCAGTGTGGACTGTGCAGACAGAGGAGAACTT...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp ACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAAGGTTTAACCTGTTACCATCCCTTTaGAACAACTGCTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: TETESTSMCCGTIPVRFNLLPSL*NNCSNS
Trigger: GCTATTTGAGCAGTTGTTGCAAAGGGATGGTAACAG...GTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATATATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATATGGAAGAGTGCCCTTTaGGGTTTTAATTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIWKSAL*GFNFLR
Trigger: CCTAAGAAAATTAAAACCCCAAAGGGCACTCTTCCA...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATTTGTGCATCTTCGTTaGTCCTGTATATTCCTGATT +
Preference number: 4 (lower is better)
Translates to: NFLVSSIASSSNRATPISFVHLR*SCIFLI
Trigger: AATCAGGAATATACAGGACCAACGAAGATGCACAAA...TGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTTAAATATATACGCTTaGAGTACCGAAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: FWANVPCLADSLQEDNTSLNIYA*STETES
Trigger: GGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCGCTTCAAGATATTTTTaGGCCAATGTACCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LVSSIASSSNRATPISCFASRYF*ANVPCL
Trigger: TAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGC...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTCCTCTGCCTGTCTaGCTCTATTTTCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCSPLPV*LYFQPP
Trigger: TGGAGGTTGAAAATAGAGCCAGACAGGCAGAGGAGA...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCACTTAGTACAGAACAATaGCCACCAGGGTTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFALSTEQ*PPGFRH
Trigger: ATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAG...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTGCTTATGGGGCACAATaGCACCATCATGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTAYGAQ*HHHVTV
Trigger: TACAGTCACATGATGGTGTCATTGTGCCCCATAAGC...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTCAATTCATATGTGGCTaGGCTCCAGATATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLQFICG*APDISF
Trigger: GAAAGAGATATCTGGAGCTCAGCCACATATGAATTG...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAGGCAAGAGCATGTGTTaGTCCATTCATAACATTCTT +
Preference number: 4 (lower is better)
Translates to: FFKRRIRKLQVFQLERTEGKSMC*SIHNIL
Trigger: AAGAATGTTATGAATGGATCAACACATGCTCTTGCC...TTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTCTTCTCTGTAGATGTTaGAGGTTGTTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLLLCRC*RLFFCS
Trigger: AGAGCAGAAGAACAACCTTCAACATCTACAGAGAAG...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAACAATTCTTCTAAAATaGGCTGGTCCATCACTCGCT +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFATILLK*AGPSLA
Trigger: AGCGAGTGATGGACCAGCGCATTTTAGAAGAATTGT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTTTTGTGTCAACTTCTaGAACAGTGCAAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCFCVNF*NSARSS
Trigger: TGAAGACCTTGCACTGTTGCAGAAGTTGACACAAAA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATCATTGAAGAACTCCTaGCATTTGATAAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFASLKNS*HLISPS
Trigger: GGATGGGCTTATCAAATGGCAGGAGTTCTTCAATGA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTTACTCAGAGCCATTaGTGTTACCATCCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFTQSH*CYHPFA
Trigger: TGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp ACAACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATTTCAATTACAGCCATTaGTTCAAGATATTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TTSLSVQSHLAPIAQLLYFNYSH*FKIFLG
Trigger: GCCCAAAAATATCTTGAAGCAATGGCTGTAATTGAA...ATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTTCAATTACAGCCATTaGTTCAAGATATTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGFNYSH*FKIFLG
Trigger: GCCCAAAAATATCTTGAAGCAATGGCTGTAATTGAA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGTCCAGTAACTTCTCCTaGATATGTTCAATTACAGCC +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARSSNFS*ICSITA
Trigger: GGCTGTAATTGAACATATGCAGGAGAAGTTACTGGA...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAATCCAGTAACTTCTCCTaGATATGTTCAATTACAGCC +
Preference number: 4 (lower is better)
Translates to: FFKRRIRKLQVFQLERTESSNFS*ICSITA
Trigger: GGCTGTAATTGAACATATGCAGGAGAAGTTACTGGA...TTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTATTGGGTGGCACCATaGAAGTTAAACAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCYWVAP*KLNNSL
Trigger: CAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTATCACATCATTCAGCTaGGCCACTTCTACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLITSFS*ATSTLL
Trigger: TAAAAGAGTAGAAGTGGCCCAGCTGAATGATGTGAT...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTGGGCCAATTCATATGTaGCTGAGCTCCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTGPIHM*LSSRYL
Trigger: GAGATATCTGGAGCTCAGCCACATATGAATTGGCCC...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp ACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAAGGTTTAACCACATCTATGTGCTGTaGAACAATACCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TETESTSMCCGTIPVRFNHIYVL*NNTSKV
Trigger: AACCTTACTGGTATTGTTCCACAGCACATAGATGTG...GTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCTTAAATATATACGCTTaGAGTACCGAAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: LVSSIASSSNRATPISCFLNIYA*STETES
Trigger: GGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGTTTAGGAGACAGTCTTaGTCAGTAAAGTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARFRRQS*SVKLGI
Trigger: GATACCCAACTTTACTGACCAAGACTGTCTCCTAAA...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCNCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTAACTGCTCAAATAGCTaGAGTATTGGTACAACTTCC +
Preference number: 4 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLNCSNS*SIGTTS
Trigger: GGAAGTTGTACCAATACTCCAGCTATTTGAGCAGTT...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAGGCTTCAAGATATTTTTaGGCCAATGTACCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: SSRGVSGNSRFSNLKEQKASRYF*ANVPCL
Trigger: TAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGC...CTTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTCTTAGTACAGAACAATaGCCACCAGGGTTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCLSTEQ*PPGFRH
Trigger: ATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAG...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp ACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAAGGTTTAACTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: TETESTSMCCGTIPVRFNCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...GTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTGCACAGATATTTATTaGGTGGCACCATGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCCTDIY*VAPCKL
Trigger: TAACTTGCATGGTGCCACCCAATAAATATCTGTGCA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp ACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAAGGTTTAACATCTCTTTAGTAATTTaGAATAGTCCTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TETESTSMCCGTIPVRFNISLVI*NSPPES
Trigger: GCTTTCCGGAGGACTATTTCAAATTACTAAAGAGAT...GTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTCTTCTGCCACTGTTTaGAGTCTAAAAGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCSSATV*SLKELN
Trigger: ATTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR TCA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGTCTTTATTTTCCTCCTaGAGTTTCCTATCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARSLFSS*SFLSSL
Trigger: TAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGA...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTGCCTTGGATTCAGTaGCCTTTCTTTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFALPWIQ*PFFGDF
Trigger: AAAATCTCCAAAGAAAGGTCACTGAATCCAAGGCAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTACAATTCTTCTAAAATaGGCTGGTCCATCACTCGCT +
Preference number: 4 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSTILLK*AGPSLA
Trigger: AGCGAGTGATGGACCAGCGCATTTTAGAAGAATTGT...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTTTGTGTCAACTTCTaGAACAGTGCAAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFCVNF*NSARSS
Trigger: TGAAGACCTTGCACTGTTGCAGAAGTTGACACAAAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTTCATTGAAGAACTCCTaGCATTTGATAAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSSLKNS*HLISPS
Trigger: GGATGGGCTTATCAAATGGCAGGAGTTCTTCAATGA...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCACCCTCCAAACTTTTATaGCGATTAAATATCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAPSKLL*RLNIPS
Trigger: GCTTGGGATATTTAATCGGCATAAAAGTTTGGAGGG...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAGAATCCACATCTATGTaGTGTGGAACAATACCAGTA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAESTSM*CGTIPV
Trigger: TACTGGTATTGTTCCACAGCACATAGATGTGGATTC...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAGTAGATGTTGAAGGTTaGTTCAACTTATCCACCTCA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAVDVEG*FNLSTS
Trigger: TGAGGTGGATAAGTTGAAGCAACCTTCAACATCTAC...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434088.1
CDS-3UTR GCA 90 bp TTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAATTTGGAGTAACCTTCTaGCACTGTTTGAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: FFKRRIRKLQVFQLERTEFGVTF*HCLKSK
Trigger: TTTAGACTTCAAACAGTGGCAGAAGGTTACTCCAAA...TTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATGGAAGAGTGCCCTTTaGGGTTTTAATTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAWKSAL*GFNFLR
Trigger: CCTAAGAAAATTAAAACCCCAAAGGGCACTCTTCCA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAATCACATCATTCAGCTaGGCCACTTCTACTCTTTTA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAITSFS*ATSTLL
Trigger: TAAAAGAGTAGAAGTGGCCCAGCTGAATGATGTGAT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCACACATCTATGTGCTGTaGAACAATACCAGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAHIYVL*NNTSKV
Trigger: AACCTTACTGGTATTGTTCCACAGCACATAGATGTG...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTTAGGAGACAGTCTTaGTCAGTAAAGTTGGGTATC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFRRQS*SVKLGI
Trigger: GATACCCAACTTTACTGACCAAGACTGTCTCCTAAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTCTTAGTACAGAACAATaGCCACCAGGGTTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTLSTEQ*PPGFRH
Trigger: ATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAG...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAATCTCTTTAGTAATTTaGAATAGTCCTCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAISLVI*NSPPES
Trigger: GCTTTCCGGAGGACTATTTCAAATTACTAAAGAGAT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTGAACTTCTTTGGGAATaGACTCATTCTGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTELLWE*THSEGK
Trigger: CTTCCCTTCAGAATGAGTTCATTCCCAAAGAAGTTC...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTCTTCTCTGTAGATGTTaGAGGTTGTTCTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTLLCRC*RLFFCS
Trigger: AGAGCAGAAGAACAACCTTCAACATCTACAGAGAAG...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TCTTCTCCAATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTCCTTCTGCCACTGTTTaGAGTCTAAAAGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: SSPMNRMSFSFSVDVEGCPSATV*SLKELN
Trigger: ATTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGG...ACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCATTGGAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp ATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTCTGCTCCTTCTGCCACTGTTTaGAGTCTAAAAGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: MNRMSFSFSVDVEGCSSAPSATV*SLKELN
Trigger: ATTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGG...AGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR GCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTATCTGGTCAAGCATTTaGACATACCTCTCTCTGACT +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTIWSSI*TYLSLT
Trigger: AGTCAGAGAGAGGTATGTGCAAATGCTTGACCAGAT...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTTGTGCATCTTCGTTaGTCCTGTATATTCCTGATT +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFVHLR*SCIFLI
Trigger: AATCAGGAATATACAGGACCAACGAAGATGCACAAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAGCTTCAAGATATTTTTaGGCCAATGTACCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAASRYF*ANVPCL
Trigger: TAAGCAAGGTACATTGGCCCAAAAATATCTTGAAGC...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp ATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTCTGCTCCTTTCTTGATGTCATaGCTAATTCCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: MNRMSFSFSVDVEGCSSAPFLMS*LIPLDL
Trigger: AAGATCTAGAGGAATTAGTCATGACATCAAGAAAGG...AGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CCA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTAAATATATACGCTTaGAGTACCGAAACAGAATCC +
Preference number: 4 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFALNIYA*STETES
Trigger: GGATTCTGTTTCGGTACTCCAAGCGTATATATTTAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR TCA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTTTATTTTCCTCCTaGAGTTTCCTATCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTSLFSS*SFLSSL
Trigger: TAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGA...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS GCA 90 bp AGGGCCCCGAGGTTTAGCGCCCTCCATAGGGGCTGCCTTCAGCGGTaGCGGCGGAGGAGGGAGACAGCTAAGACAATCCCTACACCCTCT +
Preference number: 5 (lower is better)
Translates to: RAPRFSALHRGCLQR*RRRRETAKTIPTPS
Trigger: AGAGGGTGTAGGGATTGTCTTAGCTGTCTCCCTCCTCCGCCGGCACCGCTGAAGGCAGCCCCTATGGAGGGCGCTAAACCTCGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507383.5
ENST00000508229.5
ENST00000509175.5
ENST00000617277.4
CDS CCA 90 bp CCAGTTCCACAAACTCGCGAGTTGGGCAGGCCTCGCACTGCTTCTTaGTTTAAAATGACGGGAAAGGGACACCCGCGATCCTACCCACAC +
Preference number: 5 (lower is better)
Translates to: PVPQTRELGRPRTAS*FKMTGKGHPRSYPH
Trigger: GTGTGGGTAGGATCGCGGGTGTCCCTTTCCCGTCATTTTAAACCAAGAAGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTGTGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000511889.5
CDS GCA 90 bp CGATCAGGGCCCAGTTCCCTCAATGCTAGAGCCAAGAGAAGGCTGTaGTACTCGGCTCCACTCAGGCATGACAGCAAGAGGCAAAGATGT +
Preference number: 5 (lower is better)
Translates to: RSGPSSLNARAKRRL*YSAPLRHDSKRQRC
Trigger: ACATCTTTGCCTCTTGCTGTCATGCCTGAGTGGAGCCGAGTAGCACAGCCTTCTCTTGGCTCTAGCATTGAGGGAACTGGGCCCTGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 90 bp CACTCCATCCTCCCACCCAGACTGCCCTTTAGGAAGGCCTGCTCGTaGAGAACATTTCCCCTTTGCTTCCTTACTGTCCATTCATTAGGC +
Preference number: 5 (lower is better)
Translates to: HSILPPRLPFRKACS*RTFPLCFLTVHSLG
Trigger: GCCTAATGAATGGACAGTAAGGAAGCAAAGGGGAAATGTTCTCCACGAGCAGGCCTTCCTAAAGGGCAGTCTGGGTGGGAGGATGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 90 bp GATAGAAGAGGGTGGACAGCCTGCCACAATCACAGCATGATCCGGTaGGCTAAAGCAAGCCTGCATCTAAGCCTCTCATCCTCAATCACA +
Preference number: 5 (lower is better)
Translates to: DRRGWTACHNHSMIR*AKASLHLSLSSSIT
Trigger: TGTGATTGAGGATGAGAGGCTTAGATGCAGGCTTGCTTTAGCCCACCGGATCATGCTGTGATTGTGGCAGGCTGTCCACCCTCTTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484883.1
CDS-3UTR CAA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAGCTCAGGAAGTCCTCTaGTCCCTTCCTTGGCTACAG +
Preference number: 5 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPAQEVL*SLPWLQ
Trigger: CTGTAGCCAAGGAAGGGACAAGAGGACTTCCTGAGC...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCACGCTCACTTCCTCCTTaGCTGGAACGCCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPRSLPP*LERLFV
Trigger: GACAAACAGGCGTTCCAGCAAAGGAGGAAGTGAGCG...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTCATCTATTTCCTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTCCACAAACTCGCGAGTaGGGCAGGCCTCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: FSSISCHSSRGVSGNSRFPQTRE*GRPRTA
Trigger: AGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTGTGG...AAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAGGAAATAGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS TCA 90 bp TCTGTCCACAGAGAAGCCTTCCACTGTGGTTTTACCTTTGCCATTTaGCCTACTGAATTGCCTGTCTTCTCCCAGCAACAGAACTCAGGG +
Preference number: 5 (lower is better)
Translates to: SVHREAFHCGFTFAI*PTELPVFSQQQNSG
Trigger: CCCTGAGTTCTGTTGCTGGGAGAAGACAGGCAATTCAGTAGGTCAAATGGCAAAGGTAAAACCACAGTGGAAGGCTTCTCTGTGGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCCTCTTGTCCCTTCCTaGGCTACAGACACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSPLVPS*ATDTFN
Trigger: GTTAAAAGTGTCTGTAGCCAAGGAAGGGACAAGAGG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCATTTACTCAGAGCCATaGCTGTTACCATCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSIYSEP*LLPSLC
Trigger: GCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAAT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAATTTACTCAGAGCCATaGCTGTTACCATCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPIYSEP*LLPSLC
Trigger: GCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAAT...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCTTTCCACAGGTTGCCTaGGATTCAGTGACCTTTCTT +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSFPQVA*DSVTFL
Trigger: AAGAAAGGTCACTGAATCCAAGGCAACCTGTGGAAA...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTACTTTCTTGATCCTACCCACACATaGCGTACCCGCCCAGCATCC +
Preference number: 5 (lower is better)
Translates to: LLLSLYFPPEVSYPPYFLDPTHT*RTRPAS
Trigger: GGATGCTGGGCGGGTACGCAATGTGTGGGTAGGATC...AAGAAAGTAAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS CCA 90 bp TCCACACCAGCCCTCTCTAGCATAGTATCCATCACATCATTCAGCTaGGCCACTTCTACTCTTTTATTAGGTTTCATGGATGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: STPALSSIVSITSFS*ATSTLLLGFMDGKS
Trigger: GCTCTTCCCATCCATGAAACCTAATAAAAGAGTAGAAGTGGCCCAGCTGAATGATGTGATGGATACTATGCTAGAGAGGGCTGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000510593.5
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTGCTCAGGAAGTCCTCTaGTCCCTTCCTTGGCTACAG +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCAQEVL*SLPWLQ
Trigger: CTGTAGCCAAGGAAGGGACAAGAGGACTTCCTGAGC...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAGTTTGTGCATCTTCGTaGGTCCTGTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPVCASS*VLYIPD
Trigger: ATCAGGAATATACAGGACCAACGAAGATGCACAAAC...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCAATCTGGTCAAGCATTaGCACATACCTCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLNLVKH*HIPLSD
Trigger: GTCAGAGAGAGGTATGTGCAAATGCTTGACCAGATT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAAATAGCTGGAGTATaGGTACAACTTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSQIAGV*VQLPCQ
Trigger: CTGACAAGGAAGTTGTACCAATACTCCAGCTATTTG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTTTCCACAGGTTGCCTaGGATTCAGTGACCTTTCTT +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLFPQVA*DSVTFL
Trigger: AAGAAAGGTCACTGAATCCAAGGCAACCTGTGGAAA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAACTGCTCAAATACGTTTAATCCCGCCGTaGTCACGGAATCCGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GFTQSHCCYHPFATTAQIRLIPP*SRNPKV
Trigger: CACTTTCGGATTCCGTGACAACGGCGGGATTAAACG...TATTTGAGCAGTTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS TCA 90 bp AGCTCAGCACTTTCACTTCAGAAATGTTTACCCATTCACTTTCCCTaGGTTGGGGGTCACCCTTTCATAACGTCATGCCTTTGCATGGAA +
Preference number: 5 (lower is better)
Translates to: SSALSLQKCLPIHFP*VGGHPFITSCLCME
Trigger: TTCCATGCAAAGGCATGACGTTATGAAAGGGTGACCCCCAACTCAGGGAAAGTGAATGGGTAAACATTTCTGAAGTGAAAGTGCTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 90 bp AGCACTTTCACTTCAGAAATGTTTACCCATTCACTTTCCCTGAGTTaGGGGTCACCCTTTCATAACGTCATGCCTTTGCATGGAATGCTG +
Preference number: 5 (lower is better)
Translates to: STFTSEMFTHSLSLS*GSPFHNVMPLHGML
Trigger: CAGCATTCCATGCAAAGGCATGACGTTATGAAAGGGTGACCCCCAACTCAGGGAAAGTGAATGGGTAAACATTTCTGAAGTGAAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS-3UTR CAA 90 bp AACTTCCTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCACCTCTTGTCCCTTCCTaGGCTACAGACACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: NFLVSSIASSSNRATPISPLVPS*ATDTFN
Trigger: GTTAAAAGTGTCTGTAGCCAAGGAAGGGACAAGAGG...TGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCGTTTGTGCATCTTCGTaGGTCCTGTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSVCASS*VLYIPD
Trigger: ATCAGGAATATACAGGACCAACGAAGATGCACAAAC...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCAAGAACTCCTGCCATTaGATAAGCCCATCCTTAACA +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALKNSCH*ISPSLT
Trigger: TGTTAAGGATGGGCTTATCAAATGGCAGGAGTTCTT...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCAAGAACTCCTGCCATTaGATAAGCCCATCCTTAACA +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLKNSCH*ISPSLT
Trigger: TGTTAAGGATGGGCTTATCAAATGGCAGGAGTTCTT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTA +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSIGTTS*SVQSHL
Trigger: TAGATGCGATTGAACTGACAAGGAAGTTGTACCAAT...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTTGCACAGATATTTATaGGGTGGCACCATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSLHRYL*GGTMQV
Trigger: AACTTGCATGGTGCCACCCAATAAATATCTGTGCAA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTTGCACAGATATTTATaGGGTGGCACCATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALLHRYL*GGTMQV
Trigger: AACTTGCATGGTGCCACCCAATAAATATCTGTGCAA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTCAGTCATAGTCCTTTaGGAGGACCAAATCCTGGAA +
Preference number: 5 (lower is better)
Translates to: FWANVPCLADSLQEDNTSSVIVL*EDQILE
Trigger: TTCCAGGATTTGGTCCTCCAAAAGGACTATGACTGA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS CCA 90 bp GAGAACATTTCCCCTTTGCTTCCTTACTGTCCATTCATTAGGCACTaGGCAGAAGCTGTCTTGGGCCCTTACAACTCTATTAAAATTGCT +
Preference number: 5 (lower is better)
Translates to: ENISPLLPYCPFIRH*AEAVLGPYNSIKIA
Trigger: AGCAATTTTAATAGAGTTGTAAGGGCCCAAGACAGCTTCTGCCCAGTGCCTAATGAATGGACAGTAAGGAAGCAAAGGGGAAATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCACAGTCCACACTGACTaGTCGAATAAGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALTVHTD*SNKFMK
Trigger: TTTCATGAACTTATTCGACAAGTCAGTGTGGACTGT...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GTCCTTTCAAAGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAATCTGGTCAAGCATTaGCACATACCTCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: VLSKGMLFLSTEQWPPGFNLVKH*HIPLSD
Trigger: GTCAGAGAGAGGTATGTGCAAATGCTTGACCAGATT...AAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCAGTTAAATATATACGCTaGGAGTACCGAAACAGAATC +
Preference number: 5 (lower is better)
Translates to: LFLSTEQWPPGFRHALLPVKYIR*EYRNRI
Trigger: GATTCTGTTTCGGTACTCCAAGCGTATATATTTAAC...TGGGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTGCTTCAAGATATTTTaGGGCCAATGTACCTTGCTT +
Preference number: 5 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSCFKIF*GQCTLL
Trigger: AAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCA...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTGCTTCAAGATATTTTaGGGCCAATGTACCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLCFKIF*GQCTLL
Trigger: AAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCA...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTGCTTCAAGATATTTTaGGGCCAATGTACCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALCFKIF*GQCTLL
Trigger: AAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCTTTCCACAGGTTGCCTaGGATTCAGTGACCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LVSSIASSSNRATPISCFFPQVA*DSVTFL
Trigger: AAGAAAGGTCACTGAATCCAAGGCAACCTGTGGAAA...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCTCCCTTTCAAAGGGAATGTaGTTCCTTAGTACAGAACAA +
Preference number: 5 (lower is better)
Translates to: CCSLVQNNGHQGLGMLSSLSKGM*FLSTEQ
Trigger: TTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAG...GGAGGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTTTGCACAGATATTTATaGGGTGGCACCATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: FWANVPCLADSLQEDNTSLHRYL*GGTMQV
Trigger: AACTTGCATGGTGCCACCCAATAAATATCTGTGCAA...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCAATATATGTAGTAGTTaGTGCATCTTCGTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLNICSS*CIFVGP
Trigger: AGGACCAACGAAGATGCACAAACTACTACATATATT...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTAGGTCTTCAGTGTCCTaGTTTGATAGCAGTATGATG +
Preference number: 5 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGRSSVS*FDSSMM
Trigger: CATCATACTGCTATCAAACAAGGACACTGAAGACCT...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCTGTAGACTCTTCCATTaGTTCTACCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALCRLFH*FYLLFK
Trigger: CTTAAACAAGAGGTAGAACAAATGGAAGAGTCTACA...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCATCTTCTGCCACTGTTaGAAGTCTAAAAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: GMLFLSTEQWPPGFRHALIFCHC*KSKRTE
Trigger: TTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGAT...GAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCGTTAAATATATACGCTaGGAGTACCGAAACAGAATC +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLVKYIR*EYRNRI
Trigger: GATTCTGTTTCGGTACTCCAAGCGTATATATTTAAC...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCCAAATAGCTGGAGTATaGGTACAACTTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LVSSIASSSNRATPISCFQIAGV*VQLPCQ
Trigger: CTGACAAGGAAGTTGTACCAATACTCCAGCTATTTG...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGGAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCGTTCAATTACAGCCATaGCTTCAAGATATTTTTGGG +
Preference number: 5 (lower is better)
Translates to: RECCSLVQNNGHQGLGMLVQLQP*LQDIFG
Trigger: CCCAAAAATATCTTGAAGCAATGGCTGTAATTGAAC...GAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp GAATGTTGTTCCTTAGTACAGAACAATGGCCACCAGGGTTTAGGCATGCTCTCCCTTTCAAAGGGAATGTaGTTCCTTAGTACAGAACAA +
Preference number: 5 (lower is better)
Translates to: ECCSLVQNNGHQGLGMLSLSKGM*FLSTEQ
Trigger: TTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAG...GGAGAGCATGCCTAAACCCTGGTGGCCATTGTTCTGTACTAAGGAACAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTTTGCACAGATATTTATaGGGTGGCACCATGCAAGTT +
Preference number: 5 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGLHRYL*GGTMQV
Trigger: AACTTGCATGGTGCCACCCAATAAATATCTGTGCAA...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCACAGTCCACACTGACTaGTCGAATAAGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: LVSSIASSSNRATPISCFTVHTD*SNKFMK
Trigger: TTTCATGAACTTATTCGACAAGTCAGTGTGGACTGT...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTAATCTGGTCAAGCATTaGCACATACCTCTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCNLVKH*HIPLSD
Trigger: GTCAGAGAGAGGTATGTGCAAATGCTTGACCAGATT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAGAAGAACTCCTGCCATTaGATAAGCCCATCCTTAACA +
Preference number: 5 (lower is better)
Translates to: SSRGVSGNSRFSNLKEQKKNSCH*ISPSLT
Trigger: TGTTAAGGATGGGCTTATCAAATGGCAGGAGTTCTT...CTTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTGTTTCAAATAGAGGTATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTA +
Preference number: 5 (lower is better)
Translates to: PCLADSLQEDNTSVSNRGIGTTS*SVQSHL
Trigger: TAGATGCGATTGAACTGACAAGGAAGTTGTACCAAT...ACCTCTATTTGAAACAGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGATTTACTCAGAGCCATaGCTGTTACCATCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARIYSEP*LLPSLC
Trigger: GCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAAT...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTGGGCCAATGTACCTTGCTTAGCTGACTCTCTCCAGGAAGACAACACATCTAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: FWANVPCLADSLQEDNTSKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...AGATGTGTTGTCTTCCTGGAGAGAGTCAGCTAAGCAAGGTACATTGGCCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp ATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTCTGCTCCTCTTGTCCCTTCCTaGGCTACAGACACTTTTAAC +
Preference number: 5 (lower is better)
Translates to: MNRMSFSFSVDVEGCSSAPLVPS*ATDTFN
Trigger: GTTAAAAGTGTCTGTAGCCAAGGAAGGGACAAGAGG...AGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTGTTTGTGCATCTTCGTaGGTCCTGTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCVCASS*VLYIPD
Trigger: ATCAGGAATATACAGGACCAACGAAGATGCACAAAC...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTAGGTCTTCAGTGTCCTaGTTTGATAGCAGTATGATG +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCRSSVS*FDSSMM
Trigger: CATCATACTGCTATCAAACAAGGACACTGAAGACCT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTGCCATTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGATGTAGACTCTTCCATTaGTTCTACCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LPFFKRRIRKLQVFQLERCRLFH*FYLLFK
Trigger: CTTAAACAAGAGGTAGAACAAATGGAAGAGTCTACA...TCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAATGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGAAGAACTCCTGCCATTaGATAAGCCCATCCTTAACA +
Preference number: 5 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARKNSCH*ISPSLT
Trigger: TGTTAAGGATGGGCTTATCAAATGGCAGGAGTTCTT...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTCAAATAGCTGGAGTATaGGTACAACTTCCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCQIAGV*VQLPCQ
Trigger: CTGACAAGGAAGTTGTACCAATACTCCAGCTATTTG...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTAAAACATCTTGAGAGTAAGATTCCTACTACCACCATCTTCAGTCATAGTCCTATTTACTCAGAGCCATaGCTGTTACCATCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LKHLESKIPTTTIFSHSPIYSEP*LLPSLC
Trigger: GCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAAT...AGGACTATGACTGAAGATGGTGGTAGTAGGAATCTTACTCTCAAGATGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CAA 90 bp GCTTGGAGTACCGAAACAGAATCCACATCTATGTGCTGTGGAACAATACCAGTAGTTCAATTACAGCCATaGCTTCAAGATATTTTTGGG +
Preference number: 5 (lower is better)
Translates to: AWSTETESTSMCCGTIPVVQLQP*LQDIFG
Trigger: CCCAAAAATATCTTGAAGCAATGGCTGTAATTGAAC...TACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGGTACTCCAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCATTTCCACAGGTTGCCTaGGATTCAGTGACCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAFPQVA*DSVTFL
Trigger: AAGAAAGGTCACTGAATCCAAGGCAACCTGTGGAAA...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTTGTCAGTTCAATCGCATCTAGCTCCAATCGCGCAACTCCTATATCATGTTTCCTTTCAAAGGGAATGTaGTTCCTTAGTACAGAACAA +
Preference number: 5 (lower is better)
Translates to: LVSSIASSSNRATPISCFLSKGM*FLSTEQ
Trigger: TTGTTCTGTACTAAGGAACAACATTCCCTTTGAAAG...GAAACATGATATAGGAGTTGCGCGATTGGAGCTAGATGCGATTGAACTGACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CTAAAACATCTTGAGAGTAAGATTCCTACTACCACCATCTTCAGTCATAGTCCTGTTTGTGCATCTTCGTaGGTCCTGTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LKHLESKIPTTTIFSHSPVCASS*VLYIPD
Trigger: ATCAGGAATATACAGGACCAACGAAGATGCACAAAC...AGGACTATGACTGAAGATGGTGGTAGTAGGAATCTTACTCTCAAGATGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTACAGTCCACACTGACTaGTCGAATAAGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCTVHTD*SNKFMK
Trigger: TTTCATGAACTTATTCGACAAGTCAGTGTGGACTGT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTCTTCAAGAGGCGTATCAGGAAACTCCAGGTTTTCCAACTTGAAAGAACAGAAACAGTCCACACTGACTaGTCGAATAAGTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: FFKRRIRKLQVFQLERTETVHTD*SNKFMK
Trigger: TTTCATGAACTTATTCGACAAGTCAGTGTGGACTGT...TTCTGTTCTTTCAAGTTGGAAAACCTGGAGTTTCCTGATACGCCTCTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGTCTTCAGTGTCCTaGTTTGATAGCAGTATGATG +
Preference number: 5 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFARSSVS*FDSSMM
Trigger: CATCATACTGCTATCAAACAAGGACACTGAAGACCT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TGTGAGTTAGTGGATTTACTCAGAGCCATTGCTGTTACCATCCCTTTGCAACAATGTAGACTCTTCCATTaGTTCTACCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: CELVDLLRAIAVTIPLQQCRLFH*FYLLFK
Trigger: CTTAAACAAGAGGTAGAACAAATGGAAGAGTCTACA...TTGTTGCAAAGGGATGGTAACAGCAATGGCTCTGAGTAAATCCACTAACTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTATTGGTACAACTTCCTaGTCAGTTCAATCGCATCTA +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCIGTTS*SVQSHL
Trigger: TAGATGCGATTGAACTGACAAGGAAGTTGTACCAAT...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTGCTTCAAGATATTTTaGGGCCAATGTACCTTGCTT +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCCFKIF*GQCTLL
Trigger: AAGCAAGGTACATTGGCCCAAAAATATCTTGAAGCA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGCACTGTTGTAGACTCTTCCATTaGTTCTACCTCTTGTTTAAG +
Preference number: 5 (lower is better)
Translates to: RYLLGGTMQVKQLFARHCCRLFH*FYLLFK
Trigger: CTTAAACAAGAGGTAGAACAAATGGAAGAGTCTACA...ACAGTGCCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAGGGTTCAATTACAGCCATaGCTTCAAGATATTTTTGGG +
Preference number: 5 (lower is better)
Translates to: LHRYLLGGTMQVKQLFARVQLQP*LQDIFG
Trigger: CCCAAAAATATCTTGAAGCAATGGCTGTAATTGAAC...CCTTGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp AGGTTGTTCTTCTGCTCTCTCTTTATTTTCCTCCTGAAGTTTCCTATCCTCCTTGTTCAATTACAGCCATaGCTTCAAGATATTTTTGGG +
Preference number: 5 (lower is better)
Translates to: RLFFCSLFIFLLKFPILLVQLQP*LQDIFG
Trigger: CCCAAAAATATCTTGAAGCAATGGCTGTAATTGAAC...AAGGAGGATAGGAAACTTCAGGAGGAAAATAAAGAGAGAGCAGAAGAACAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAATATATGTAGTAGTTaGTGCATCTTCGTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFANICSS*CIFVGP
Trigger: AGGACCAACGAAGATGCACAAACTACTACATATATT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTAGGTCTTCAGTGTCCTaGTTTGATAGCAGTATGATG +
Preference number: 5 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTRSSVS*FDSSMM
Trigger: CATCATACTGCTATCAAACAAGGACACTGAAGACCT...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAATCTTCTGCCACTGTTaGAAGTCTAAAAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAIFCHC*KSKRTE
Trigger: TTCAGTTCTTTTAGACTTCAAACAGTGGCAGAAGAT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1
CDS-3UTR CAA 90 bp CTAAAACATCTTGAGAGTAAGATTCCTACTACCACCATCTTCAGTCATAGTCCTGTTAAATATATACGCTaGGAGTACCGAAACAGAATC +
Preference number: 5 (lower is better)
Translates to: LKHLESKIPTTTIFSHSPVKYIR*EYRNRI
Trigger: GATTCTGTTTCGGTACTCCAAGCGTATATATTTAAC...AGGACTATGACTGAAGATGGTGGTAGTAGGAATCTTACTCTCAAGATGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS-3UTR CAA 90 bp CAATTGCACAGATATTTATTGGGTGGCACCATGCAAGTTAAACAACTCTTTGCAAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: QLHRYLLGGTMQVKQLFAKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...TGCAAAGAGTTGTTTAACTTGCATGGTGCCACCCAATAAATATCTGTGCAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000511157.5
ENST00000617277.4
CDS GCA 90 bp TGTTTAAGTTTATTCACTAAGTTTCTCCATTTTTGTGTCAACTTCTaGAACAGTGCAAGGTCTTCAGTGTCCTTGTTTGATAGCAGTATG +
Preference number: 5 (lower is better)
Translates to: CLSLFTKFLHFCVNF*NSARSSVSLFDSSM
Trigger: CATACTGCTATCAAACAAGGACACTGAAGACCTTGCACTGTTGCAGAAGTTGACACAAAAATGGAGAAACTTAGTGAATAAACTTAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS GCA 90 bp CAAAAGAAACCTATGGGAACTTACGAAACAGAATCCACATCTATGTaGTGTGGAACAATACCAGTAAGGTTTAACAATATATCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: QKKPMGTYETESTSM*CGTIPVRFNNISKC
Trigger: ACACTTGGATATATTGTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGTAAGTTCCCATAGGTTTCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461179.2
CDS-3UTR CAA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTAATATATGTAGTAGTTaGTGCATCTTCGTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSNICSS*CIFVGP
Trigger: AGGACCAACGAAGATGCACAAACTACTACATATATT...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp ATGAATCGAATGAGTTTTTCCTTCTCTGTAGATGTTGAAGGTTGTTCTTCTGCTAATATATGTAGTAGTTaGTGCATCTTCGTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: MNRMSFSFSVDVEGCSSANICSS*CIFVGP
Trigger: AGGACCAACGAAGATGCACAAACTACTACATATATT...AGCAGAAGAACAACCTTCAACATCTACAGAGAAGGAAAAACTCATTCGATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTTCTGTTAAATATATACGCTaGGAGTACCGAAACAGAATC +
Preference number: 5 (lower is better)
Translates to: SADLTSSSSCCSSSSFTSVKYIR*EYRNRI
Trigger: GATTCTGTTTCGGTACTCCAAGCGTATATATTTAAC...AGAAGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS-3UTR CAA 90 bp TTTTCTGCTGACCTGACTTCTTCTTCTTCTTGTTGTTCTTCTTCTTCTTTTACTAAGTTAAACAACTCTTaGCAAGGCACTGTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: FSADLTSSSSCCSSSSFTKLNNS*QGTVKL
Trigger: TAACTTCACAGTGCCTTGCAAAGAGTTGTTTAACTT...AGTAAAAGAAGAAGAAGAACAACAAGAAGAAGAAGAAGTCAGGTCAGCAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS GCA 72 bp AGGTTTAGCGCCCTCCATAGGGGCTGCCTTCAGCGGTaGCGGCGGAGGAGGGAGACAGCTAAGACAATCCCT +
Preference number: 6 (lower is better)
Translates to: RFSALHRGCLQR*RRRRETAKTIP
Trigger: AGGGATTGTCTTAGCTGTCTCCCTCCTCCGCCGGCACCGCTGAAGGCAGCCCCTATGGAGGGCGCTAAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507383.5
ENST00000508229.5
ENST00000509175.5
ENST00000617277.4
CDS CAA 90 bp GCAGGCTGCCACATAGTCCCGCCCAGCATCCGCTCACTTCCTCCTTaGCTGGAACGCCTGTTTGTCGTCATAGAAACCCAGGGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: AGCHIVPPSIRSLPP*LERLFVVIETQGPE
Trigger: CTCGGGGCCCTGGGTTTCTATGACGACAAACAGGCGTTCCAGCAAAGGAGGAAGTGAGCGGATGCTGGGCGGGACTATGTGGCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617277.4
CDS GCA 72 bp GACGGGAAAGGGACACCCGCGATCCTACCCACACATTaGGTACCCGCCCAGCATCCGCTCACTTCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: DGKGTPAILPTH*VPAQHPLTSSF
Trigger: AAAGGAGGAAGTGAGCGGATGCTGGGCGGGTACGCAATGTGTGGGTAGGATCGCGGGTGTCCCTTTCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000511889.5
CDS CAA 90 bp CCCCACAGGCAGCGCTCTCGCGCGCCAGTTCCACAAACTCGCGAGTaGGGCAGGCCTCGCACTGCTTCTTGGTTTAAAATGACGGGAAAG +
Preference number: 6 (lower is better)
Translates to: PHRQRSRAPVPQTRE*GRPRTASWFKMTGK
Trigger: CTTTCCCGTCATTTTAAACCAAGAAGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTGTGGAACTGGCGCGCGAGAGCGCTGCCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000511889.5
CDS GCA 72 bp GCTAATTTAGACACAAATCAGCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCCCGCCCAGCATCCGCTC +
Preference number: 6 (lower is better)
Translates to: ANLDTNQRRTGT*RLPHSPAQHPL
Trigger: GAGCGGATGCTGGGCGGGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTTGTGTCTAAATTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000508285.2
ENST00000617277.4
CDS CAA 72 bp CAGCGCTCTCGCGCGCCAGTTCCACAAACTCGCGAGTaGGGCAGGCCTCGCACTGCTTCTTGGTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: QRSRAPVPQTRE*GRPRTASWFKM
Trigger: CATTTTAAACCAAGAAGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTGTGGAACTGGCGCGCGAGAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000511889.5
CDS GCA 72 bp CCCAGTTCCCTCAATGCTAGAGCCAAGAGAAGGCTGTaGTACTCGGCTCCACTCAGGCATGACAGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: PSSLNARAKRRL*YSAPLRHDSKR
Trigger: CCTCTTGCTGTCATGCCTGAGTGGAGCCGAGTAGCACAGCCTTCTCTTGGCTCTAGCATTGAGGGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS GCA 72 bp GCTAATTTAGACACAAATCAGCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCCTTCCCCACAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ANLDTNQRRTGT*RLPHSPSPQAA
Trigger: CGCTGCCTGTGGGGAAGGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTTGTGTCTAAATTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511157.5
CDS CCA 72 bp GGGTGGACAGCCTGCCACAATCACAGCATGATCCGGTaGGCTAAAGCAAGCCTGCATCTAAGCCTCTCATCC +
Preference number: 6 (lower is better)
Translates to: GWTACHNHSMIR*AKASLHLSLSS
Trigger: GGATGAGAGGCTTAGATGCAGGCTTGCTTTAGCCCACCGGATCATGCTGTGATTGTGGCAGGCTGTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484883.1
CDS CCA 72 bp CAAACTCGCGAGTTGGGCAGGCCTCGCACTGCTTCTTaGTTTAAAATGACGGGAAAGGGACACCCGCGATCC +
Preference number: 6 (lower is better)
Translates to: QTRELGRPRTAS*FKMTGKGHPRS
Trigger: GGATCGCGGGTGTCCCTTTCCCGTCATTTTAAACCAAGAAGCAGTGCGAGGCCTGCCCAACTCGCGAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000511889.5
CDS GCA 72 bp TCCATCCTCCCACCCAGACTGCCCTTTAGGAAGGCCTaGTCGTGGAGAACATTTCCCCTTTGCTTCCTTACT +
Preference number: 6 (lower is better)
Translates to: SILPPRLPFRKA*SWRTFPLCFLT
Trigger: AGTAAGGAAGCAAAGGGGAAATGTTCTCCACGAGCAGGCCTTCCTAAAGGGCAGTCTGGGTGGGAGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS GCA 72 bp GCTAATTTAGACACAAATCAGCGCCGCACTGGGACTTaGAGGCTGCCACATAGTCTTCCTCCTTTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: ANLDTNQRRTGT*RLPHSLPPLLE
Trigger: TTCCAGCAAAGGAGGAAGACTATGTGGCAGCCTGCAAGTCCCAGTGCGGCGCTGATTTGTGTCTAAATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508229.5
CDS GCA 72 bp TGTCGCTCTGATGGCATCTCCCCCTCCAAACTTTTATaGCGATTAAATATCCCAAGCCCAATATCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: CRSDGISPSKLL*RLNIPSPISAQ
Trigger: CTGGGCAGATATTGGGCTTGGGATATTTAATCGGCATAAAAGTTTGGAGGGGGAGATGCCATCAGAGCGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
CDS CCA 72 bp TCCCCTTTGCTTCCTTACTGTCCATTCATTAGGCACTaGGCAGAAGCTGTCTTGGGCCCTTACAACTCTATT +
Preference number: 6 (lower is better)
Translates to: SPLLPYCPFIRH*AEAVLGPYNSI
Trigger: AATAGAGTTGTAAGGGCCCAAGACAGCTTCTGCCCAGTGCCTAATGAATGGACAGTAAGGAAGCAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CAA 72 bp CTTAACCGTGCTTGCCACATAGTAGATGCTCAGTGCTaGTCTGCTGAGTCATACTGCATAGTGGTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: LNRACHIVDAQC*SAESYCIVVKP
Trigger: AGGCTTCACCACTATGCAGTATGACTCAGCAGACAAGCACTGAGCATCTACTATGTGGCAAGCACGGTTAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CAA 90 bp TGTTCTATGCTTAACCGTGCTTGCCACATAGTAGATGCTCAGTGCTaGTCTGCTGAGTCATACTGCATAGTGGTGAAGCCTTCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: CSMLNRACHIVDAQC*SAESYCIVVKPSGN
Trigger: ATTCCCTGAAGGCTTCACCACTATGCAGTATGACTCAGCAGACAAGCACTGAGCATCTACTATGTGGCAAGCACGGTTAAGCATAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS GCA 72 bp CCTCTCTCTGACTTTAGACAGAAGTTCTCCTCTGTCTaGACAGTCCACACTGACTTGTCGAATAAGTTCATG +
Preference number: 6 (lower is better)
Translates to: PLSDFRQKFSSV*TVHTDLSNKFM
Trigger: CATGAACTTATTCGACAAGTCAGTGTGGACTGTGCAGACAGAGGAGAACTTCTGTCTAAAGTCAGAGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS CAA 72 bp CTGAGTTGGGGGTCACCCTTTCATAACGTCATGCCTTaGCATGGAATGCTGGCTAATCTTTTCTCTATGTTG +
Preference number: 6 (lower is better)
Translates to: LSWGSPFHNVMP*HGMLANLFSML
Trigger: CAACATAGAGAAAAGATTAGCCAGCATTCCATGCAAAGGCATGACGTTATGAAAGGGTGACCCCCAACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS TCA 72 bp CTTTCACTTCAGAAATGTTTACCCATTCACTTTCCCTaGGTTGGGGGTCACCCTTTCATAACGTCATGCCTT +
Preference number: 6 (lower is better)
Translates to: LSLQKCLPIHFP*VGGHPFITSCL
Trigger: AAGGCATGACGTTATGAAAGGGTGACCCCCAACTCAGGGAAAGTGAATGGGTAAACATTTCTGAAGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 72 bp ACTTCAGAAATGTTTACCCATTCACTTTCCCTGAGTTaGGGGTCACCCTTTCATAACGTCATGCCTTTGCAT +
Preference number: 6 (lower is better)
Translates to: TSEMFTHSLSLS*GSPFHNVMPLH
Trigger: ATGCAAAGGCATGACGTTATGAAAGGGTGACCCCCAACTCAGGGAAAGTGAATGGGTAAACATTTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CAA 90 bp GCCCGAACTAGACACAGTTCCCTGGTCAGTTCTTCAATAACATGCTaGAAATTATACAATTCTTCTAAAATGCGCTGGTCCATCACTCGC +
Preference number: 6 (lower is better)
Translates to: ARTRHSSLVSSSITC*KLYNSSKMRWSITR
Trigger: GCGAGTGATGGACCAGCGCATTTTAGAAGAATTGTATAATTTCAAGCATGTTATTGAAGAACTGACCAGGGAACTGTGTCTAGTTCGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS GCA 72 bp GGTCACCCTTTCATAACGTCATGCCTTTGCATGGAATaGTGGCTAATCTTTTCTCTATGTTGGCAAAATCCT +
Preference number: 6 (lower is better)
Translates to: GHPFITSCLCME*WLIFSLCWQNP
Trigger: AGGATTTTGCCAACATAGAGAAAAGATTAGCCAGCATTCCATGCAAAGGCATGACGTTATGAAAGGGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 72 bp CTTTGCATGGAATGCTGGCTAATCTTTTCTCTATGTTaGCAAAATCCTAATCTTTCAAGGCCCACCAGATGC +
Preference number: 6 (lower is better)
Translates to: LCMECWLIFSLC*QNPNLSRPTRC
Trigger: GCATCTGGTGGGCCTTGAAAGATTAGGATTTTGCCAACATAGAGAAAAGATTAGCCAGCATTCCATGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CAA 72 bp TTCTCCTTTAGCTCAGGAAGTCCTCTTGTCCCTTCCTaGGCTACAGACACTTTTAACTTTTTGCTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: FSFSSGSPLVPS*ATDTFNFLLSD
Trigger: ATCTGAGAGCAAAAAGTTAAAAGTGTCTGTAGCCAAGGAAGGGACAAGAGGACTTCCTGAGCTAAAGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000508229.5
ENST00000508285.2
ENST00000511157.5
ENST00000617277.4
CDS CAA 72 bp GAAATCAATCATCTGCCGAGCAATCTGGTCAAGCATTaGCACATACCTCTCTCTGACTTTAGACAGAAGTTC +
Preference number: 6 (lower is better)
Translates to: EINHLPSNLVKH*HIPLSDFRQKF
Trigger: GAACTTCTGTCTAAAGTCAGAGAGAGGTATGTGCAAATGCTTGACCAGATTGCTCGGCAGATGATTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS TCA 72 bp AGAGAAAGAAGAACTTCTTTGGGAATGAACTCATTCTaGAGGGAAGTAGGAAGGAGTTTTGAACGATCCACC +
Preference number: 6 (lower is better)
Translates to: RERRTSLGMNSF*REVGRSFERST
Trigger: GGTGGATCGTTCAAAACTCCTTCCTACTTCCCTTCAGAATGAGTTCATTCCCAAAGAAGTTCTTCTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367618.8
ENST00000507383.5
ENST00000508229.5
ENST00000508285.2
ENST00000509175.5
ENST00000511157.5
ENST00000511889.5
ENST00000617277.4
CDS GCA 72 bp AAATCAATCATCTGCCGAGCAATCTGGTCAAGCATTTaGACATACCTCTCTCTGACTTTAGACAGAAGTTCT +
Preference number: 6 (lower is better)
Translates to: KSIICRAIWSSI*TYLSLTLDRSS
Trigger: AGAACTTCTGTCTAAAGTCAGAGAGAGGTATGTGCAAATGCTTGACCAGATTGCTCGGCAGATGATTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS CCA 72 bp TATTTCTTTCAATCACCTTCAGGGCCAATTCATATGTaGCTGAGCTCCAGATATCTCTTTCTGCCACTAACT +
Preference number: 6 (lower is better)
Translates to: YFFQSPSGPIHM*LSSRYLFLPLT
Trigger: AGTTAGTGGCAGAAAGAGATATCTGGAGCTCAGCCACATATGAATTGGCCCTGAAGGTGATTGAAAGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS TCA 72 bp TTTTCTAAAAAGGCAGTGAGATTAGATGAATGTGTCTaGAGGGTAGAAATAAGGGAAGCAACAGCATCAATG +
Preference number: 6 (lower is better)
Translates to: FSKKAVRLDECV*RVEIREATASM
Trigger: CATTGATGCTGTTGCTTCCCTTATTTCTACCCTTCAGACACATTCATCTAATCTCACTGCCTTTTTAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484455.1
CDS GCA 72 bp TTATTCACTAAGTTTCTCCATTTTTGTGTCAACTTCTaGAACAGTGCAAGGTCTTCAGTGTCCTTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: LFTKFLHFCVNF*NSARSSVSLFD
Trigger: ATCAAACAAGGACACTGAAGACCTTGCACTGTTGCAGAAGTTGACACAAAAATGGAGAAACTTAGTGAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367618.8
ENST00000434088.1
ENST00000461179.2
ENST00000511157.5
ENST00000617277.4
CDS GCA 72 bp CCTATGGGAACTTACGAAACAGAATCCACATCTATGTaGTGTGGAACAATACCAGTAAGGTTTAACAATATA +
Preference number: 6 (lower is better)
Translates to: PMGTYETESTSM*CGTIPVRFNNI
Trigger: TATATTGTTAAACCTTACTGGTATTGTTCCACAGCACATAGATGTGGATTCTGTTTCGTAAGTTCCCATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461179.2
CDS CCA 72 bp CTTGAAAGAACAGAAGTCAAGAGAACTAATCAAACTTaGAAGAATTTTGGAGTAACCTTCTGCCACTGTTTG +
Preference number: 6 (lower is better)
Translates to: LERTEVKRTNQT*KNFGVTFCHCL
Trigger: CAAACAGTGGCAGAAGGTTACTCCAAAATTCTTCCAAGTTTGATTAGTTCTCTTGACTTCTGTTCTTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511157.5
ENST00000617277.4
CDS TCA 72 bp ATGCTAATAACTCCCCTAATACTTCATTTATACTTGTaGTGGCTCCTAACGCATTCCACCTTAAATTGTGAT +
Preference number: 6 (lower is better)
Translates to: MLITPLILHLYL*WLLTHSTLNCD
Trigger: ATCACAATTTAAGGTGGAATGCGTTAGGAGCCATCACAAGTATAAATGAAGTATTAGGGGAGTTATTAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489080.1
CDS CCA 72 bp CTTGAAAGAACAGAAGTCAAGAGAACTAATCAAACTTaGAAGAATTTTGGAGTAACCATTGTCCCCATTTAT +
Preference number: 6 (lower is better)
Translates to: LERTEVKRTNQT*KNFGVTIVPIY
Trigger: ATAAATGGGGACAATGGTTACTCCAAAATTCTTCCAAGTTTGATTAGTTCTCTTGACTTCTGTTCTTTCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367618.8
ENST00000434088.1