Pregenerated sensors for AWAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204195Ensembl transcript IDs: ENST00000374521.4, ENST00000480702.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTCCCAGAGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATaGGGGGCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VSQRTQMMTRHQAPA*GALGCPPLRNDCVQ Trigger: CTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCTCTGGGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR TCA 90 bp | CATATAACCTCCCTCATCTCCTGCCTGTCTTTGGTTAGTGGCAGATaGGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: HITSLISCLSLVSGR*VSSSRQALLCSWAC Trigger: GCATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAACCAAAGACAGGCAGGAGATGAGGGAGGTTATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR GCA 90 bp | TCCTGTAAGGACCCTGTGGCAAGAAGGCAAAGAAGGAATTCCTCATaGCCTCCCCTACCACATATAACCTCCCTCATCTCCTGCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SCKDPVARRQRRNSS*PPLPHITSLISCLS Trigger: AGACAGGCAGGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR TCA 90 bp | AATCCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTCATCAGGCCCCAGCATaGGGGGCACTAGGATGCCCT | + |
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Preference number: 2 (lower is better) Translates to: NPQRQKVDSCPGAGGICSHQAPA*GALGCP Trigger: AGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATG...ACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR GCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATAGGCAGGCACTCCTGTaGTCCTGGGCATGCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNRQALL*SWACST Trigger: GGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCT...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR GCA 90 bp | CAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCACCTCCCTCATCTCCTaGCTGTCTTTGGTTAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QRQKVDSCPGAGGICSDCTSLIS*LSLVSG Trigger: GCCACTAACCAAAGACAGGCAGGAGATGAGGGAGGT...GCAGTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR TCA 90 bp | GGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCAAATGATGACCAGGCCCTCCTTTGAGGAATaGCTGTGTGCAGCTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GEYAVTANVSQRTQMMTRPSFEE*LCAALQ Trigger: CTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGG...CCTGGTCATCATTTGAGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCTCTCCTGCCTGTCTTTaGTTAGTGGCAGATGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QRQKVDSCPGAGGICSDCSPACL*LVADES Trigger: AGACTCATCTGCCACTAACCAAAGACAGGCAGGAGA...GCAGTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACAGAAGGAATTCCTCATaGCCTCCCCTACCACATATA | + |
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Preference number: 2 (lower is better) Translates to: PQRQKVDSCPGAGGICSDRRNSS*PPLPHI Trigger: TATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCT...GTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR CCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATCCTGTAAGGACCCTGTaGCAAGAAGGCAAAGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNPVRTL*QEGKEG Trigger: TCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGG...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR-3UTR TCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATTTGGTTAGTGGCAGATaGGTCTCTTCTTCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNLVSGR*VSSSRQ Trigger: CTGCCTTGAAGAAGAGACTCATCTGCCACTAACCAA...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR TCA 72 bp | AGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATaGGGGGCACTAGGATGCCCTCCTTTGAGGAATGAC | + |
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Preference number: 3 (lower is better) Translates to: RTQMMTRHQAPA*GALGCPPLRND Trigger: GTCATTCCTCAAAGGAGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR TCA 72 bp | TCCCTCATCTCCTGCCTGTCTTTGGTTAGTGGCAGATaGGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: SLISCLSLVSGR*VSSSRQALLCS Trigger: GGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAACCAAAGACAGGCAGGAGATGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| 3UTR GCA 72 bp | GACCCTGTGGCAAGAAGGCAAAGAAGGAATTCCTCATaGCCTCCCCTACCACATATAACCTCCCTCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: DPVARRQRRNSS*PPLPHITSLIS Trigger: GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTTGCCACAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | GACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGATGCCCTCCTTTGAGGAATGGCCAAGTGAGGAGTaGTGCCTGGGAAGGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: DQASGPSMRGTRMPSFEEWPSEE*CLGRSS Trigger: CGAAGACCTTCCCAGGCATCACTCCTCACTTGGCCA...TTCCTCAAAGGAGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | CCAGAGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGGACAGCGTGGCCAAGTaGGGAGTGATGCCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PEDSNDDQASGPSMRGTRDSVAK*GVMPGK Trigger: CTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTC...CCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | CCAGAGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGAGGCAGGCACTCCTGTaGTCCTGGGCATGCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: PEDSNDDQASGPSMRGTRRQALL*SWACST Trigger: GGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCT...CCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | CCAGAGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGCACCTCCCACTACAATaGCCACGAGGTTGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PEDSNDDQASGPSMRGTRHLPLQ*PRGCQC Trigger: GCACTGGCAACCTCGTGGGCATTGTAGTGGGAGGTG...CCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCCCCAGGCCGAACGCCTaGCACCTCGCTCTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QRRNSSCPPLPHITSLISPRPNA*HLALGS Trigger: AGACCCCAGAGCGAGGTGGCAGGCGTTCGGCCTGGG...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | GTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCTAGGCTGCTTGGAATaGGCCATGATTCTCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VAQGLGEYAVTANVSQRTLGCLE*AMILGS Trigger: GCTCCCGAGAATCATGGCTCATTCCAAGCAGCCTAG...AGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCCCAGCCCCTGGGCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATGCAGTACCTTCACAATGCCCACGAGGTTaGCAGTGCCATGGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ESLLQGRHSCAPGHAVPSQCPRG*QCHGSA Trigger: TGCTGAGCCATGGCACTGGCAACCTCGTGGGCATTG...TGAAGGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGATGCCCTCCTTTGAGGAACAGAAAGTAGATAGTTaGCCAGGGGCTGGGGGAATA | + |
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Preference number: 4 (lower is better) Translates to: DQASGPSMRGTRMPSFEEQKVDS*PGAGGI Trigger: TATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTG...TTCCTCAAAGGAGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGATGCCCCAGATAGTTGATGGCTaGCTGGCTCACAGAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: DSNDDQASGPSMRGTRMPQIVDG*LAHRAH Trigger: GTGTGCTCTGTGAGCCAGCCAGCCATCAACTATCTG...GGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | AATCCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTCATGCTGGAGGGCTGTaGGCACGAACCCCTTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: NPQRQKVDSCPGAGGICSHAGGL*ARTPCA Trigger: AGCGCAAGGGGTTCGTGCGCACAGCCCTCCAGCATG...ACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | TTAGTGGCAGATGAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATAATAGGCCTGGAGTATaGCAGGAGCCCAGTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LVADESLLQGRHSCAPGHNRPGV*QEPSGA Trigger: GGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATT...ATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATGCAGTACCTTCATTCAATTTGGGGCAGTaGCAGAGGCTCCCCAACCAC | + |
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Preference number: 4 (lower is better) Translates to: ESLLQGRHSCAPGHAVPSFNLGQ*QRLPNH Trigger: GTGGTTGGGGAGCCTCTGCCACTGCCCCAAATTGAA...TGAAGGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | AATCCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGGGGGTGAACCCCCATaGGGTAGTTGTGCTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: NPQRQKVDSCPGAGGICSGGEPP*GSCAQV Trigger: CACCTGAGCACAACTACCTCATGGGGGTTCACCCCC...ACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | AAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCAGGCCCCAGCATaGGGGGCACTAGGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KKAKKEFLMPSPTTYNLPHQAPA*GALGCP Trigger: AGGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATG...AGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATGCAGTACCTTCACCTCAGTGCAGAAGTTaGAGAAGGCGCCAAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ESLLQGRHSCAPGHAVPSPQCRS*RRRQRS Trigger: TGACCTTTGGCGCCTTCTGCAACTTCTGCACTGAGG...TGAAGGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATGCAGTACCTTCACGGCGGAAGCAGCTCTaGAACTTGTACATCCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: ESLLQGRHSCAPGHAVPSRRKQL*NLYILL Trigger: TAGCAGGATGTACAAGTTCCAGAGCTGCTTCCGCCG...TGAAGGTACTGCATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCGGCTCAGCAGATAGTTaGTGGCTGGCTGGCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: QRRNSSCPPLPHITSLISGSADS*WLAGSQ Trigger: CTGTGAGCCAGCCAGCCATCAACTATCTGCTGAGCC...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | CCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACCCCTCCTTTGAGGAATaGCTGTGTGCAGCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PQRQKVDSCPGAGGICSDPSFEE*LCAALQ Trigger: CTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGG...GTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | CCTGTAAGGACCCTGTGGCAAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCTGGGGGAATATGCAGTaGCTGCTAATGTGTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PVRTLWQEGKEGIPHALPWGNMQ*LLMCPR Trigger: TCTGGGACACATTAGCAGTCACTGCATATTCCCCCA...GGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCAAATGATGACCAGGGTGTTGGGCACACTTTaGAGGGCCTCACCCACACCT | + |
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Preference number: 4 (lower is better) Translates to: GEYAVTANVSQRTQMMTRVLGTL*RASPTP Trigger: AGGTGTGGGTGAGGCCCTGCAAAGTGTGCCCAACAC...CCTGGTCATCATTTGAGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCAACCCCTTGCGCTTCTaGAGGATGAGGGTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QRRNSSCPPLPHITSLISNPLRF*RMRVVV Trigger: CACCACCACCCTCATCCTCCAGAAGCGCAAGGGGTT...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | CCAGAGGACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGGGAACTTGTACATCCTaGTATCCTTATGGAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PEDSNDDQASGPSMRGTRGTCTS*YPYGTA Trigger: TGCTGTTCCATAAGGATAGCAGGATGTACAAGTTCC...CCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTCCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCGTGAGGAGTGATGCCTaGGAAGGTCTTCGAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QRRNSSCPPLPHITSLISVRSDA*EGLREA Trigger: GGCTTCTCGAAGACCTTCCCAGGCATCACTCCTCAC...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | AATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCTGCCTGTCTGCACTCCTGTGCTCCTaGGCATGCAGTACCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: NSSCPPLPHITSLISCLSALLCS*ACSTFI Trigger: AATGAAGGTACTGCATGCCCAGGAGCACAGGAGTGC...AGACAGGCAGGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | AATCCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTCAGCTTTTGGGTCTCTaGGCAGCCATAGTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: NPQRQKVDSCPGAGGICSQLLGL*AAIVGL Trigger: AAGACCCACTATGGCTGCTCAGAGACCCAAAAGCTG...ACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATCCACGAGGTTGCCAGTaGCATGGCTCAGCAGATAGT | + |
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Preference number: 4 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNPRGCQ*HGSADS Trigger: ACTATCTGCTGAGCCATGGCACTGGCAACCTCGTGG...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCAGGTAGACGAACAATaGCTGCAAGATCCAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VAQGLGEYAVTANVSQRTQVDEQ*LQDPKD Trigger: ATCTTTTGGATCTTGCAGCCATTGTTCGTCTACCTG...AGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCCCAGCCCCTGGGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCAAATGATGACCAGGATGGCAGGAGCCCAGTaGAGCCTTGACAGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GEYAVTANVSQRTQMMTRMAGAQ*SLDRSF Trigger: AAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCAT...CCTGGTCATCATTTGAGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | TTAGTGGCAGATGAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATTTATGGAACAGCACCTaGTCATACACCTCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LVADESLLQGRHSCAPGHLWNST*SYTSVS Trigger: GGAAACTGAGGTGTATGATCAGGTGCTGTTCCATAA...ATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATCTGTGCTCCTGGGCATaGAGTACCTTCATTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNLCSWA*STFIHR Trigger: CCTGTGAATGAAGGTACTGCATGCCCAGGAGCACAG...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATACCTCCCTCATCTCCTaGCTGTCTTTGGTTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNTSLIS*LSLVSG Trigger: GCCACTAACCAAAGACAGGCAGGAGATGAGGGAGGT...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGCAGATGAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATAGAAGGAATTCCTCATaGCCTCCCCTACCACATATA | + |
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Preference number: 4 (lower is better) Translates to: LVADESLLQGRHSCAPGHRRNSS*PPLPHI Trigger: TATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCT...ATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR TCA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCTTGGTTAGTGGCAGATaGGTCTCTTCTTCAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QRRNSSCPPLPHITSLISLVSGR*VSSSRQ Trigger: CTGCCTTGAAGAAGAGACTCATCTGCCACTAACCAA...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | AAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCCTGTAAGGACCCTGTaGCAAGAAGGCAAAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KKAKKEFLMPSPTTYNLPPVRTL*QEGKEG Trigger: TCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGG...AGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATGCAAGATCCAAAAGATaGCAAGGTAGCTCAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNARSKR*QGSSKA Trigger: GGCCTTTGAGCTACCTTGCCATCTTTTGGATCTTGC...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CCA 90 bp | GCACTAGGATGCCCTCCTTTGAGGAATGACTGTGTGCAGCTCTTCAGAAAGAATTCTCCTGCCTGTCTTTaGTTAGTGGCAGATGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ALGCPPLRNDCVQLFRKNSPACL*LVADES Trigger: AGACTCATCTGCCACTAACCAAAGACAGGCAGGAGA...ATTCTTTCTGAAGAGCTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR GCA 90 bp | TTAGTGGCAGATGAGTCTCTTCTTCAAGGCAGGCACTCCTGTGCTCCTGGGCATAGCATCCATATAAAGTaGATGGTATTTGTCCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LVADESLLQGRHSCAPGHSIHIK*MVFVHH Trigger: ATGGTGGACAAATACCATGCACTTTATATGGATGCT...ATGCCCAGGAGCACAGGAGTGCCTGCCTTGAAGAAGAGACTCATCTGCCACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | CAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCGTGCGCACGAACCCCTaGCGCTTCTGGAGGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: QRQKVDSCPGAGGICSDCVRTNP*RFWRMR Trigger: CCTCATCCTCCAGAAGCGCAAGGGGTTCGTGCGCAC...GCAGTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS TCA 90 bp | TGCAGAAGGCGCCAAAGGTCAGGAGGCCATGGGGGTGAACCCCCATaGGGTAGTTGTGCTCAGGTGATAGGTCCTTTGTCTTCAGGATCG | + |
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Preference number: 5 (lower is better) Translates to: CRRRQRSGGHGGEPP*GSCAQVIGPLSSGS Trigger: CGATCCTGAAGACAAAGGACCTATCACCTGAGCACAACTACCTCATGGGGGTTCACCCCCATGGCCTCCTGACCTTTGGCGCCTTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000374521.4 ENST00000480702.1 |
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| CDS TCA 90 bp | TCCCTAACAAAGGGGATCTTGAAGAACCAGGACAGCGTGGCCAAGTaGGGAGTGATGCCTGGGAAGGTCTTCGAGAAGCCTGTGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SLTKGILKNQDSVAK*GVMPGKVFEKPVAS Trigger: TGAGGCCACAGGCTTCTCGAAGACCTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTCCTGGTTCTTCAAGATCCCCTTTGTTAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374521.4 ENST00000480702.1 |
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| CDS CCA 90 bp | CAGTGGCAGAGGCTCCCCAACCACAGTGACAATAGGCCTGGAGTATaGCAGGAGCCCAGTGGAGCCTTGACAGAAGCTTTGTCCATAGAA | + |
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Preference number: 5 (lower is better) Translates to: QWQRLPNHSDNRPGV*QEPSGALTEALSIE Trigger: TTCTATGGACAAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATTGTCACTGTGGTTGGGGAGCCTCTGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | GCAAATCCACAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCACAATGCCCACGAGGTaGCCAGTGCCATGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ANPQRQKVDSCPGAGGICTMPTR*PVPWLS Trigger: GCTGAGCCATGGCACTGGCAACCTCGTGGGCATTGT...GCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTGTGGATTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | CCTGTAAGGACCCTGTGGCAAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCGCTTGGCTTTTCAATTaGGGGCAGTGGCAGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: PVRTLWQEGKEGIPHALPAWLFN*GQWQRL Trigger: GAGCCTCTGCCACTGCCCCAAATTGAAAAGCCAAGC...GGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | GTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCTAATGTGTCCCAGAGGACTCTAACAAAGGGGATCTaGAAGAACCAGGACAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: VAQGLGEYAVTANVSQRTLTKGI*KNQDSV Trigger: CACGCTGTCCTGGTTCTTCAAGATCCCCTTTGTTAG...AGTCCTCTGGGACACATTAGCAGTCACTGCATATTCCCCCAGCCCCTGGGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | CCTGTAAGGACCCTGTGGCAAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCCTAGGATGCCCTCCTTaGAGGAATGACTGTGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PVRTLWQEGKEGIPHALPLGCPP*RNDCVQ Trigger: CTGCACACAGTCATTCCTCAAAGGAGGGCATCCTAG...GGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | CAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTCATCTCCGCCTCAGTGCAGAAGTaGCAGAAGGCGCCAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: QRRNSSCPPLPHITSLISASVQK*QKAPKV Trigger: GACCTTTGGCGCCTTCTGCAACTTCTGCACTGAGGC...GGAGATGAGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | CAGAGACAGAAAGTAGATAGTTGCCCAGGGGCTGGGGGAATATGCAGTGACTGCACAGAGCACACACCTTaGGCCATGAGGTACTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: QRQKVDSCPGAGGICSDCTEHTP*AMRYSL Trigger: TAGGGAGTACCTCATGGCCAAAGGTGTGTGCTCTGT...GCAGTCACTGCATATTCCCCCAGCCCCTGGGCAACTATCTACTTTCTGTCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | GACTCAAATGATGACCAGGCATCAGGCCCCAGCATGAGGGGCACTAGGATGCCCAAGCAGCTCTGGAACTaGTACATCCTGCTATCCTTA | + |
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Preference number: 5 (lower is better) Translates to: DSNDDQASGPSMRGTRMPKQLWN*YILLSL Trigger: TAAGGATAGCAGGATGTACAAGTTCCAGAGCTGCTT...GGGCATCCTAGTGCCCCTCATGCTGGGGCCTGATGCCTGGTCATCATTTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | TCTTCAGAAAGAATTCCTGTAAGGACCCTGTGGCAAGAAGGCAAAGAAGGAATTGGTGTTGGGCACACTTaGCAGGGCCTCACCCACACC | + |
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Preference number: 5 (lower is better) Translates to: SSERIPVRTLWQEGKEGIGVGHT*QGLTHT Trigger: GGTGTGGGTGAGGCCCTGCAAAGTGTGCCCAACACC...AATTCCTTCTTTGCCTTCTTGCCACAGGGTCCTTACAGGAATTCTTTCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS-3UTR CAA 90 bp | AAGAAGGCAAAGAAGGAATTCCTCATGCCCTCCCCTACCACATATAACCTCCCTGAGCCCAGTGGAGCCTaGACAGAAGCTTTGTCCATA | + |
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Preference number: 5 (lower is better) Translates to: KKAKKEFLMPSPTTYNLPEPSGA*TEALSI Trigger: TATGGACAAAGCTTCTGTCAAGGCTCCACTGGGCTC...AGGGAGGTTATATGTGGTAGGGGAGGGCATGAGGAATTCCTTCTTTGCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS GCA 72 bp | CACTTTGCAGGGCCTCACCCACACCTCCCACTACAATaGCCACGAGGTTGCCAGTGCCATGGCTCAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HFAGPHPHLPLQ*PRGCQCHGSAD Trigger: ATCTGCTGAGCCATGGCACTGGCAACCTCGTGGGCATTGTAGTGGGAGGTGTGGGTGAGGCCCTGCAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS CCA 72 bp | GAACCAGGACAGCGTGGCCAAGTGAGGAGTGATGCCTaGGAAGGTCTTCGAGAAGCCTGTGGCCTCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: EPGQRGQVRSDA*EGLREACGLSA Trigger: TGCACTGAGGCCACAGGCTTCTCGAAGACCTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTCCTGGTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374521.4 ENST00000480702.1 |
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| CDS TCA 72 bp | CCACGAGGTTGCCAGTGCCATGGCTCAGCAGATAGTTaGTGGCTGGCTGGCTCACAGAGCACACACCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRGCQCHGSADS*WLAGSQSTHLW Trigger: CCAAAGGTGTGTGCTCTGTGAGCCAGCCAGCCATCAACTATCTGCTGAGCCATGGCACTGGCAACCTCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS TCA 72 bp | CGCCAAAGGTCAGGAGGCCATGGGGGTGAACCCCCATaGGGTAGTTGTGCTCAGGTGATAGGTCCTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RQRSGGHGGEPP*GSCAQVIGPLS Trigger: AGACAAAGGACCTATCACCTGAGCACAACTACCTCATGGGGGTTCACCCCCATGGCCTCCTGACCTTTGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000374521.4 ENST00000480702.1 |
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| CDS CCA 72 bp | AGGCTCCCCAACCACAGTGACAATAGGCCTGGAGTATaGCAGGAGCCCAGTGGAGCCTTGACAGAAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RLPNHSDNRPGV*QEPSGALTEAL Trigger: CAAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATTGTCACTGTGGTTGGGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS TCA 72 bp | AAGGGGATCTTGAAGAACCAGGACAGCGTGGCCAAGTaGGGAGTGATGCCTGGGAAGGTCTTCGAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KGILKNQDSVAK*GVMPGKVFEKP Trigger: AGGCTTCTCGAAGACCTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTCCTGGTTCTTCAAGATCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374521.4 ENST00000480702.1 |
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| CDS CAA 72 bp | AATAGGCCTGGAGTATGGCAGGAGCCCAGTGGAGCCTaGACAGAAGCTTTGTCCATAGAAGACACAACAGTA | + |
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Preference number: 6 (lower is better) Translates to: NRPGVWQEPSGA*TEALSIEDTTV Trigger: TACTGTTGTGTCTTCTATGGACAAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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| CDS CAA 90 bp | CACAGTGACAATAGGCCTGGAGTATGGCAGGAGCCCAGTGGAGCCTaGACAGAAGCTTTGTCCATAGAAGACACAACAGTAGAAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: HSDNRPGVWQEPSGA*TEALSIEDTTVETK Trigger: TTTGGTTTCTACTGTTGTGTCTTCTATGGACAAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATTGTCACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374521.4 |
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