RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AVPR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126895

Ensembl transcript IDs: ENST00000337474.5, ENST00000370049.1, ENST00000430697.1, ENST00000434679.6, ENST00000646375.1

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTaGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCA +
Preference number: 1 (lower is better)
Translates to: LVQGHTVSQPRGHRL*PILHGSPSQWLPGP
Trigger: TGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR GCA 90 bp CTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCC +
Preference number: 1 (lower is better)
Translates to: LLTMKCPWPGRSWRW*RTHLGDPGWVGCVP
Trigger: GGGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTC +
Preference number: 1 (lower is better)
Translates to: QLLTMKCPWPGRSWR*CRTHLGDPGWVGCV
Trigger: GACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 90 bp ACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTaGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: TQQLLTMKCPWPGRS*RWCRTHLGDPGWVG
Trigger: CCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 90 bp ACAGCACATAGACGACCACAATCACTAGCGTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGTGGGCTCCCTCACCGGGGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: TAHRRPQSLASSSQS*PQLLTRGLPHRGCL
Trigger: CAGGCAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGACGCTAGTGATTGTGGTCGTCTATGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR TCA 90 bp CTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGACTC +
Preference number: 1 (lower is better)
Translates to: LLKASRGKTPNSSSR*SVLGQGGAGGGAGL
Trigger: GAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR GCA 90 bp GGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGCTCCCTCACCGGGGCTaGCTGTCCGGCGTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GAGGGAGLILGTQAGWGALPHRG*LSGVPC
Trigger: GCAGGGGACGCCGGACAGGCAGCCCCGGTGAGGGAG...CGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR TCA 90 bp AGTAGCACAAAGGGCGCCCCTTCCAGAGGTGCCTCCGGGTCCCACGCGGCCCACGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: SSTKGAPSRGASGSHAAHGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...GTGGGCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCGCCCTTTGTGCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR CCA 90 bp GGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTACAGCTGCTGACACGTaGGCTCCCTCACCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GGAGGGAGLILGTQAGWGTAADT*APSPGL
Trigger: CAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGT...ACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCCCCAGCTCAGTGAGCTaGCCTGAGGGGCCCCCACAG +
Preference number: 2 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVPSSVS*PEGPPQ
Trigger: CTGTGGGGGCCCCTCAGGTCAGCTCACTGAGCTGGG...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp AGTAGCACAAAGGGCGCCCCTTCCAGAGGTGCCTCCGGGTCCCACGCGGCCCACATACAGCTGGGGATGTaGAGACCCAGGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SSTKGAPSRGASGSHAAHIQLGM*RPRQGL
Trigger: CAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTAT...GTGGGCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCGCCCTTTGTGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTGACCGCTGTCTCACCTaGGGGCACCTGCTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPDRCLT*GHLLPL
Trigger: AAGAGGGAGCAGGTGCCCCCAGGTGAGACAGCGGTC...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGACCGCTGTCTCACCTaGGGGCACCTGCTCCCTCTT +
Preference number: 2 (lower is better)
Translates to: SVPASGPQALANSPRVPLDRCLT*GHLLPL
Trigger: AAGAGGGAGCAGGTGCCCCCAGGTGAGACAGCGGTC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTTCCTTTTCAGGCCCCTaGGACCGCTGTCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSSFSGP*DRCLTW
Trigger: CCAGGTGAGACAGCGGTCCCAGGGGCCTGAAAAGGA...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCCTCAGTGAGCTGACCTaGGGGGCCCCCACAGTCCTG +
Preference number: 2 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVLSELT*GAPTVL
Trigger: CAGGACTGTGGGGGCCCCTCAGGTCAGCTCACTGAG...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCATACAGCTGGGGATGTaGAGACCCAGGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SVPASGPQALANSPRVPLIQLGM*RPRQGL
Trigger: CAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTAT...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCTCCTTTTCAGGCCCCTaGGACCGCTGTCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLSFSGP*DRCLTW
Trigger: CCAGGTGAGACAGCGGTCCCAGGGGCCTGAAAAGGA...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATGGGACCCAGGCTGGGTaGGGTGCGTCCCCGGGCACA +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDGTQAG*GASPGT
Trigger: TGTGCCCGGGGACGCACCCCACCCAGCCTGGGTCCC...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR CCA 90 bp CAGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGCTCTCCTCATACAGCTaGGGATGTGGAGACCCAGGC +
Preference number: 2 (lower is better)
Translates to: QGGAGGGAGLILGTQAGWLSSYS*GCGDPG
Trigger: GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAG...CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR CCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCGACAGGAAGGTCCCCTaGCCCCAGCCTGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPDRKVP*PQPGPS
Trigger: GGAAGGACCAGGCTGGGGCCAGGGGACCTTCCTGTC...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGAGGTTGGGTTCAGGATaGCTGGTGGGGCACAGGGGC +
Preference number: 2 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRRLGSG*LVGHRG
Trigger: GCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCT...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
3UTR-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGGTGCAGGACTCATCTTaGGGACCCAGGCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRVQDSS*GPRLGG
Trigger: CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCAC...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR TCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGAATCTCCCGGAAGATaGGCACCTGGCAGGCGGCGA +
Preference number: 2 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCESPGR*APGRRR
Trigger: TCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTC...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR GCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCTCCTCAGGCCTCTGCTaGAGCCCCTCCTACACCCAG +
Preference number: 2 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPSSGLC*SPSYTQ
Trigger: CTGGGTGTAGGAGGGGCTGCAGCAGAGGCCTGAGGA...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR GCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATTGGGGCACAGGGGCATaGGGCCAAGCCCAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDWGTGA*GQAQVA
Trigger: GGCCACTTGGGCTTGGCCGCATGCCCCTGTGCCCCA...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
3UTR-3UTR CCA 90 bp AGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTGGAGGATCTAGGTTaGGTTCAGGATGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: RSWRWCRTHLGDPGWVGCVEDLG*VQDGWW
Trigger: CCACCAGCCATCCTGAACCCAACCTAGATCCTCCAC...GCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
3UTR-3UTR TCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR CCA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGTGGGTTCAGGATGGCTaGTGGGGCACAGGGGCATGC +
Preference number: 2 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWWVQDG*WGTGAC
Trigger: GCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCA...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
3UTR-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATCGGAAGATGAGCACCTaGCAGGCGGCGATACCCAGG +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDRKMST*QAAIPR
Trigger: CCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR CAA 90 bp CCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: PLEARHPTAPHDEVS*AREELAVVQDSSWG
Trigger: TCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR TCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR GCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGGCTGCTGCTGAAAGATaGATAGATCCAGGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRAAAER*IDPGVG
Trigger: ACCAACCCCTGGATCTATGCATCTTTCAGCAGCAGC...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR TCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: LEARHPTAPHDEVSLAREQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR TCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDNSSSR*SVLGQG
Trigger: TCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTT...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR GCA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTCAGGCCTCTGCTaGAGCCCCTCCTACACCCAG +
Preference number: 2 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVSSGLC*SPSYTQ
Trigger: CTGGGTGTAGGAGGGGCTGCAGCAGAGGCCTGAGGA...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR TCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDGTRLA*ISRKMS
Trigger: GCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCC...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR GCA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVRSWRW*RTHLGD
Trigger: GTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR TCA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGAGGACACGCTGCTGCTaGAAGATGCATAGATCCAGG +
Preference number: 2 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVRTRCC*KMHRSR
Trigger: CCTGGATCTATGCATCTTTCAGCAGCAGCGTGTCCT...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 72 bp GGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTaGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTC +
Preference number: 3 (lower is better)
Translates to: GHTVSQPRGHRL*PILHGSPSQWL
Trigger: GAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CAA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGGCAGGGGCTGTGGCTaGTCCAGGGCCACACAGTGT +
Preference number: 3 (lower is better)
Translates to: SVPASGPQALANSPRVPLGRGCG*SRATQC
Trigger: ACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR-3UTR CAA 90 bp AGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGGCAGGGGCTGTGGCTaGTCCAGGGCCACACAGTGT +
Preference number: 3 (lower is better)
Translates to: REELAVVQDSSWGPRLGGGRGCG*SRATQC
Trigger: ACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCC...CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR CAA 90 bp GGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCG +
Preference number: 3 (lower is better)
Translates to: GAGGGAGLILGTQAGWGAHDEVS*AREELA
Trigger: CGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTG...CGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR TCA 72 bp CCAGGCCTCTCTGATGGCCCTGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGCACCTGGCAGGCGGCG +
Preference number: 3 (lower is better)
Translates to: PGLSDGPGTRLA*ISRKMSTWQAA
Trigger: CGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCCAGGGCCATCAGAGAGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR GCA 72 bp ATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGACCCAGGCTGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: MKCPWPGRSWRW*RTHLGDPGWVG
Trigger: CCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 72 bp GAGGTGGAGGATCTAGGTTGGGTTCAGGATGGCTGGTaGGGCACAGGGGCATGCGGCCAAGCCCAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: EVEDLGWVQDGW*GTGACGQAQVA
Trigger: GGCCACTTGGGCTTGGCCGCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCTAGATCCTCCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370049.1
3UTR CCA 72 bp CCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTaGGGATGTGGAGACCCAGGCAGGGGCTGTGGCTTG +
Preference number: 3 (lower is better)
Translates to: PQSWGLKLSSYS*GCGDPGRGCGL
Trigger: CAAGCCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
3UTR CCA 72 bp ACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: TMKCPWPGRSWR*CRTHLGDPGWV
Trigger: CACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR-3UTR CAA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGGGTGCAGGACTCATCTaGGGGACCCAGGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWGAGLI*GTQAGW
Trigger: CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACC...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR TCA 72 bp GCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGT +
Preference number: 3 (lower is better)
Translates to: ASRGKTPNSSSR*SVLGQGGAGGG
Trigger: ACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 72 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTaGCCAGGGAGGAGCTGGCGGTGGTGCAGGACTCAT +
Preference number: 3 (lower is better)
Translates to: QDTQQLLTMKCP*PGRSWRWCRTH
Trigger: ATGAGTCCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
3UTR CCA 72 bp AGACGACCACAATCACTAGCGTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGTGGGCTCCCTCACCGG +
Preference number: 3 (lower is better)
Translates to: RRPQSLASSSQS*PQLLTRGLPHR
Trigger: CCGGTGAGGGAGCCCACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGACGCTAGTGATTGTGGTCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
3UTR-3UTR CAA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGGTGGAGGATCTAGGTaGGGTTCAGGATGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: LEARHPTAPHDEVSLAREGGGSR*GSGWLV
Trigger: CACCAGCCATCCTGAACCCAACCTAGATCCTCCACC...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCTGTATGGGTGCCCAGTaGCCCCGCCGGCCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPCMGAQ*PRRPRR
Trigger: TCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACA...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTGTATGGGTGCCCAGTaGCCCCGCCGGCCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGCMGAQ*PRRPRR
Trigger: TCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACA...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGCTCCCTCACCGGGGCTaGCTGTCCGGCGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGGAGGGAGLILGTQAGWLPHRG*LSGVPC
Trigger: GCAGGGGACGCCGGACAGGCAGCCCCGGTGAGGGAG...CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCTCCTGGCTGGGCTCCTaGGCAGCTGGGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPSWLGS*AAGRWR
Trigger: ACGCCACCGCCCAGCTGCCCAGGAGCCCAGCCAGGA...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR TCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTACCGGCCGGTTCCAGTaGGCCCCACTTCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSTGRFQ*APLPWR
Trigger: CCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGT...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR TCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTCCCAGCTCAGTGAGCTaGCCTGAGGGGCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSPSSVS*PEGPPQ
Trigger: CTGTGGGGGCCCCTCAGGTCAGCTCACTGAGCTGGG...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTAGCTGGGCGGTGGCGTaGAGGTGGCTGGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQASWAVA*RWLGAQ
Trigger: CTGAGCACCCAGCCACCTTCACGCCACCGCCCAGCT...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR GCA 90 bp GGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGGAAGACGTGTATGGGTaGCCAGTGGCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GAGGGAGLILGTQAGWGAEDVYG*PVAPPA
Trigger: GGCCGGCGGGGCCACTGGGCACCCATACACGTCTTC...CGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCGCCCCTTCCAGAGGTaGCTCCGGGTCCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSRPFQR*LRVPRG
Trigger: GCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCACGGAAGCGGTCGGTaGCCTTCCAGGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQAHGSGR*PSRPAG
Trigger: CCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTG...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGGGGACCCAGGCTGGGTaGGGTGCGTCCCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: TGSGQFSTGPPPSGSQDQGTQAG*GASPGT
Trigger: TGTGCCCGGGGACGCACCCCACCCAGCCTGGGTCCC...CTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGACCGGCCGGTTCCAGTaGGCCCCACTTCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALTGRFQ*APLPWR
Trigger: CCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGT...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR TCA 90 bp AGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGACCGGCCGGTTCCAGTaGGCCCCACTTCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: REELAVVQDSSWGPRLGGTGRFQ*APLPWR
Trigger: CCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGT...CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR TCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTAGGCCCAGCAGTCAGTaGCCCCGCTGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQARPSSQ*PRCHLP
Trigger: TGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCT...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTCAGTGAGCTGACCTaGGGGGCCCCCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQALSELT*GAPTVL
Trigger: CAGGACTGTGGGGGCCCCTCAGGTCAGCTCACTGAG...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCCCCAGCTCAGTGAGCTaGCCTGAGGGGCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLPSSVS*PEGPPQ
Trigger: CTGTGGGGGCCCCTCAGGTCAGCTCACTGAGCTGGG...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCCCGACACAGGGCATCTaGCCCACGGAAGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPPTQGI*PTEAVG
Trigger: ACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGG...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGCATGGGACGGCAGATaGCACGGTGGCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLAWDGR*HGGGPA
Trigger: CGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGCATGGGACGGCAGATaGCACGGTGGCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLAWDGR*HGGGPA
Trigger: CGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGC...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCGGCGGTACGCCAGCATaGGACGGCAGATGGCACGGT +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGGGTPA*DGRWHG
Trigger: ACCGTGCCATCTGCCGTCCCATGCTGGCGTACCGCC...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCCCCAGGCAGGGGCTGTaGCTTGTCCAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGPRQGL*LVQGHT
Trigger: TGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGG...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCGACAGGAAGGTCCCCTaGCCCCAGCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPDRKVP*PQPGPS
Trigger: GGAAGGACCAGGCTGGGGCCAGGGGACCTTCCTGTC...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCACCCCGGGGAGGAACTaGGAGCCACATGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGTPGRN*EPHGQA
Trigger: TGCCTGCCCATGTGGCTCCCAGTTCCTCCCCGGGGT...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTCTGAGGGCCTGGAGGTaGTGTGCGGACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSLRAWR*CADSAS
Trigger: AGAGGCTGAGTCCGCACATCACCTCCAGGCCCTCAG...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCCTGAGGGCCTGGAGGTaGTGTGCGGACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPLRAWR*CADSAS
Trigger: AGAGGCTGAGTCCGCACATCACCTCCAGGCCCTCAG...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTAAGTGGTGGACGCCATaGGCATGGTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPKWWTP*AWWGWG
Trigger: GCCCCAGCCCCACCATGCTCATGGCGTCCACCACTT...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCAGGGCAATCCAGGTaGCATAGGTGCGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGSGQSR*HRCDGP
Trigger: GGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGA...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGAATCTCCCGGAAGATaGGCACCTGGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSESPGR*APGRRR
Trigger: TCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTC...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGGAATCTCCCGGAAGATaGGCACCTGGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GAGGGAGLILGTQAGWGAESPGR*APGRRR
Trigger: TCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTC...CGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCTCAGTGAGCTGACCTaGGGGGCCCCCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLLSELT*GAPTVL
Trigger: CAGGACTGTGGGGGCCCCTCAGGTCAGCTCACTGAG...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCGGCCTGGAGGTGATGTaGGGACTCAGCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPGLEVM*GLSLCL
Trigger: CAGGCAGAGGCTGAGTCCGCACATCACCTCCAGGCC...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCCTGGGCAGAGAGGGATaGCCAGGCACAGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPLGREG*PGTAEV
Trigger: CACTTCCGCTGTGCCTGGGCATCCCTCTCTGCCCAG...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCGAAGACGTGTATGGGTaGCCAGTGGCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSEDVYG*PVAPPA
Trigger: GGCCGGCGGGGCCACTGGGCACCCATACACGTCTTC...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTCTCCCTCACCGGGGCTaGCTGTCCGGCGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCLPHRG*LSGVPC
Trigger: GCAGGGGACGCCGGACAGGCAGCCCCGGTGAGGGAG...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCCTCCCTCACCGGGGCTaGCTGTCCGGCGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPLPHRG*LSGVPC
Trigger: GCAGGGGACGCCGGACAGGCAGCCCCGGTGAGGGAG...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCACGCGGCCCACAGCTaGACCAGGAAGAAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLHAAHS*TRKKGA
Trigger: GGCACCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTG...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGCACGCGGCCCACAGCTaGACCAGGAAGAAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGGAGGGAGLILGTQAGWHAAHS*TRKKGA
Trigger: GGCACCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTG...CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTCGCCCCTTCCAGAGGTaGCTCCGGGTCCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCRPFQR*LRVPRG
Trigger: GCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCG...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTTCCTCAGGCCTCTGCTaGAGCCCCTCCTACACCCAG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQASSGLC*SPSYTQ
Trigger: CTGGGTGTAGGAGGGGCTGCAGCAGAGGCCTGAGGA...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTGTCCCGGGTGTCCAGTaGCCTCTCCTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQAVPGVQ*PLLAAV
Trigger: AACAGCAGCCAGGAGAGGCCACTGGACACCCGGGAC...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGCCGACACAGGGCATCTaGCCCACGGAAGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALPTQGI*PTEAVG
Trigger: ACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGG...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCGGAAGATGAGCACCTaGCAGGCGGCGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQARKMST*QAAIPR
Trigger: CCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCGTGCAGGACTCATCTTaGGGACCCAGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPVQDSS*GPRLGG
Trigger: CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCAC...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPGRSWR*CRTHLG
Trigger: CCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCC...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp AGTAGCACAAAGGGCGCCCCTTCCAGAGGTGCCTCCGGGTCCCACGCGGCCCACGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSTKGAPSRGASGSHAAHGRSWR*CRTHLG
Trigger: CCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCC...GTGGGCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCGCCCTTTGTGCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGGCAGGGGCTGTaGCTTGTCCAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPPRQGL*LVQGHT
Trigger: TGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGG...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGACCGCTGTCTCACCTaGGGGCACCTGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSDRCLT*GHLLPL
Trigger: AAGAGGGAGCAGGTGCCCCCAGGTGAGACAGCGGTC...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp ACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGCCAGGAGAGAGGCCCTaGGCAGCCACCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: TQQLLTMKCPWPGRSWRWPGERP*AATPRG
Trigger: CCCCCGAGGGGTGGCTGCCCAGGGCCTCTCTCCTGG...CCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTCAGTATGGCCAGTCCTaGCTGGGCTCCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSQYGQS*LGSWAA
Trigger: AGCTGCCCAGGAGCCCAGCCAGGACTGGCCATACTG...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR TCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCTGGGGCAGGTGTTCTaGGGGCCTGGAGGTGATGTG +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLLGQVF*GPGGDV
Trigger: CACATCACCTCCAGGCCCTCAGAACACCTGCCCCAG...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp AGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCTCAGGGCAATCCAGGTaGCATAGGTGCGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSWRWCRTHLGDPGWVGCSGQSR*HRCDGP
Trigger: GGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGA...GCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGGCCTGGAGGTGATGTaGGGACTCAGCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLGLEVM*GLSLCL
Trigger: CAGGCAGAGGCTGAGTCCGCACATCACCTCCAGGCC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCTGGGCAGAGAGGGATaGCCAGGCACAGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPLGREG*PGTAEV
Trigger: CACTTCCGCTGTGCCTGGGCATCCCTCTCTGCCCAG...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCACGCGGCCCACAGCTaGACCAGGAAGAAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSHAAHS*TRKKGA
Trigger: GGCACCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTTCCTCAGGCCTCTGCTaGAGCCCCTCCTACACCCAG +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPSSGLC*SPSYTQ
Trigger: CTGGGTGTAGGAGGGGCTGCAGCAGAGGCCTGAGGA...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTTCACCTGGGGGCACCTaGTCCCTCTTTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQASPGGT*SLFPAT
Trigger: AGTGGCAGGAAAGAGGGAGCAGGTGCCCCCAGGTGA...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGCCCACCTTCCAGAGGTaGCTCCGGGTCCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: HPTAPHDEVSLAREELAVPTFQR*LRVPRG
Trigger: GCCGCGTGGGACCCGGAGGCACCTCTGGAAGGTGGG...CACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGTGGGGCACAGGGGCATaGGGCCAAGCCCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRWGTGA*GQAQVA
Trigger: GGCCACTTGGGCTTGGCCGCATGCCCCTGTGCCCCA...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGTGTATGGGTGCCCAGTaGCCCCGCCGGCCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRCMGAQ*PRRPRR
Trigger: TCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACA...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCGCCTTCCAGGCCAGCTaGGGCAGCACTTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGAFQAS*GSTWNR
Trigger: TCTGTTCCAAGTGCTGCCCCAGCTGGCCTGGAAGGC...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCCGACACAGGGCATCTaGCCCACGGAAGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSPTQGI*PTEAVG
Trigger: ACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCGGAAGATGAGCACCTaGCAGGCGGCGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLRKMST*QAAIPR
Trigger: CCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGGGGACCCAGGCTGGGTaGGGTGCGTCCCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRGTQAG*GASPGT
Trigger: TGTGCCCGGGGACGCACCCCACCCAGCCTGGGTCCC...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGTGCAGGACTCATCTTaGGGACCCAGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALVQDSS*GPRLGG
Trigger: CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCAC...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPGRSWR*CRTHLG
Trigger: CCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCC...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTACGATGAAGTGTCCTTaGCCAGGGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQATMKCP*PGRSWR
Trigger: CCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGT...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCATACAGCTGGGGATGTaGAGACCCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPIQLGM*RPRQGL
Trigger: CAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTAT...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTATACAGCTGGGGATGTaGAGACCCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSIQLGM*RPRQGL
Trigger: CAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTAT...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTGGGGCAGGTGTTCTaGGGGCCTGGAGGTGATGTG +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSLGQVF*GPGGDV
Trigger: CACATCACCTCCAGGCCCTCAGAACACCTGCCCCAG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCAAGTGGTGGACGCCATaGGCATGGTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVKWWTP*AWWGWG
Trigger: GCCCCAGCCCCACCATGCTCATGGCGTCCACCACTT...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCAGGCCCAGCAGTCAGTaGCCCCGCTGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVRPSSQ*PRCHLP
Trigger: TGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCT...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQAQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCCACAGTCCTGGGGCCTaGAGCTCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPHSPGA*SSPHTA
Trigger: AGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTG...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp AGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCCACAGTCCTGGGGCCTaGAGCTCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: RGCGLSRATQCPSLGATGHSPGA*SSPHTA
Trigger: AGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTG...GCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTGACTCAGCCTCTGCCTaGGGAGCAAGTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQADSASA*GASSMA
Trigger: GGCCATTGAACTTGCTCCTCAGGCAGAGGCTGAGTC...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp ACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGGGCCTGGAGGTGATGTaGGGACTCAGCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGSGQFSTGPPPSGSQDQGLEVM*GLSLCL
Trigger: CAGGCAGAGGCTGAGTCCGCACATCACCTCCAGGCC...CTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCAGCACCAGGCCATTaGTCAGGGCCACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPPAPGH*SGPQPQ
Trigger: TTGTGGCTGTGGCCCTGAGCAATGGCCTGGTGCTGG...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCGAAGACGTGTATGGGTaGCCAGTGGCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGEDVYG*PVAPPA
Trigger: GGCCGGCGGGGCCACTGGGCACCCATACACGTCTTC...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPRSWRW*RTHLGD
Trigger: GTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLRSWRW*RTHLGD
Trigger: GTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGTCACCTGGGGGCACCTaGTCCCTCTTTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALSPGGT*SLFPAT
Trigger: AGTGGCAGGAAAGAGGGAGCAGGTGCCCCCAGGTGA...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCTGCCAGCATGGCAGATaGCTGTTGGCGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPCQHGR*LLACVH
Trigger: GTGCACACACGCCAACAGGCATCTGCCATGCTGGCA...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCTTCCAGGCCAGCTaGGGCAGCACTTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALAFQAS*GSTWNR
Trigger: TCTGTTCCAAGTGCTGCCCCAGCTGGCCTGGAAGGC...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTCACGGAAGCGGTCGGTaGCCTTCCAGGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCHGSGR*PSRPAG
Trigger: CCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTG...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GAGGATCTAGGTTGGGTTCAGGATGGCTGGTGGGGCACAGGGGCATGCGGCCAAGCATGGGACGGCAGATaGCACGGTGGCGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: EDLGWVQDGWWGTGACGQAWDGR*HGGGPA
Trigger: CGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGC...TTGGCCGCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCTAGATCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTGCGAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQAAKMKS*GRLRRS
Trigger: GCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGC...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCCCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPPSTLR*AKMKSW
Trigger: CCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGG...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGACAGCTGCTGACACGTaGGCTCCCTCACCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRTAADT*APSPGL
Trigger: CAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGT...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCACAGCTGCTGACACGTaGGCTCCCTCACCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVTAADT*APSPGL
Trigger: CAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGT...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGGGGACCCAGGCTGGGTaGGGTGCGTCCCCGGGCACA +
Preference number: 4 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWGTQAG*GASPGT
Trigger: TGTGCCCGGGGACGCACCCCACCCAGCCTGGGTCCC...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp GGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTACGATGAAGTGTCCTTaGCCAGGGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GGAGGGAGLILGTQAGWGTMKCP*PGRSWR
Trigger: CCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGT...ACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCCCCAGGCAGGGGCTGTaGCTTGTCCAGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVPRQGL*LVQGHT
Trigger: TGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGG...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTTCCTTTTCAGGCCCCTaGGACCGCTGTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPSFSGP*DRCLTW
Trigger: CCAGGTGAGACAGCGGTCCCAGGGGCCTGAAAAGGA...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGGACAGGAAGGTCCCCTaGCCCCAGCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRDRKVP*PQPGPS
Trigger: GGAAGGACCAGGCTGGGGCCAGGGGACCTTCCTGTC...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCTGGGCAGCTGGGCGGTaGCGTGAAGGTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGWAAGR*REGGWV
Trigger: CACCCAGCCACCTTCACGCCACCGCCCAGCTGCCCA...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR CCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTATGGCCAGTCCTGGCTaGGCTCCTGGGCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCMASPG*APGQLG
Trigger: GCCCAGCTGCCCAGGAGCCCAGCCAGGACTGGCCAT...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR CCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGTGTGCACGTGTCGGTaGCAGTATGGCCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLVCTCR*QYGQSW
Trigger: CCAGGACTGGCCATACTGCCACCGACACGTGCACAC...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR TCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGGCACAAGTGGCCAATaGAGACGTGTATGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLGTSGQ*RRVWVP
Trigger: GGGCACCCATACACGTCTTCATTGGCCACTTGTGCC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR TCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGGCACAAGTGGCCAATaGAGACGTGTATGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALGTSGQ*RRVWVP
Trigger: GGGCACCCATACACGTCTTCATTGGCCACTTGTGCC...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR TCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTAGGCCCAGCAGTCAGTaGCCCCGCTGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCRPSSQ*PRCHLP
Trigger: TGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCT...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGTCAGGGCAATCCAGGTaGCATAGGTGCGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRSGQSR*HRCDGP
Trigger: GGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGA...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLGTRLA*ISRKMS
Trigger: GCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCC...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSNSSSR*SVLGQG
Trigger: TCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTT...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTGATACCCAGGGTAGGTaGCACGAACACCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPDTQGR*HEHHQG
Trigger: GCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATC...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGCACGCGGCCCACAGCTaGACCAGGAAGAAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWHAAHS*TRKKGA
Trigger: GGCACCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTG...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGCGCCCCTTCCAGAGGTaGCTCCGGGTCCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLARERPFQR*LRVPRG
Trigger: GCCGCGTGGGACCCGGAGGCACCTCTGGAAGGGGCG...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCTCACCTGGGGGCACCTaGTCCCTCTTTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSSPGGT*SLFPAT
Trigger: AGTGGCAGGAAAGAGGGAGCAGGTGCCCCCAGGTGA...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGGCGGTACGCCAGCATaGGACGGCAGATGGCACGGT +
Preference number: 4 (lower is better)
Translates to: HPTAPHDEVSLAREELAVGGTPA*DGRWHG
Trigger: ACCGTGCCATCTGCCGTCCCATGCTGGCGTACCGCC...CACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGGGCGGTACGCCAGCATaGGACGGCAGATGGCACGGT +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWGGTPA*DGRWHG
Trigger: ACCGTGCCATCTGCCGTCCCATGCTGGCGTACCGCC...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGCCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALPSTLR*AKMKSW
Trigger: CCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGG...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGCGGAAGATGAGCACCTaGCAGGCGGCGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRRKMST*QAAIPR
Trigger: CCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGCCCTGGCACCAGACTaGCATGAATCTCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLALAPD*HESPGR
Trigger: TCTTCCGGGAGATTCATGCCAGTCTGGTGCCAGGGC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGGGAGGAGCTGGCGGTaGTGCAGGACTCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVGRSWR*CRTHLG
Trigger: CCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCCC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGACCGCTGTCTCACCTaGGGGCACCTGCTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVDRCLT*GHLLPL
Trigger: AAGAGGGAGCAGGTGCCCCCAGGTGAGACAGCGGTC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGTCCTTTTCAGGCCCCTaGGACCGCTGTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: TGSGQFSTGPPPSGSQDQSFSGP*DRCLTW
Trigger: CCAGGTGAGACAGCGGTCCCAGGGGCCTGAAAAGGA...CTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGGACAGGAAGGTCCCCTaGCCCCAGCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWDRKVP*PQPGPS
Trigger: GGAAGGACCAGGCTGGGGCCAGGGGACCTTCCTGTC...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTATGGCCCAGGGTCTCTaGACTGGAGCCCTTATAGAG +
Preference number: 4 (lower is better)
Translates to: GAVACPGPHSVPASGPQAMAQGL*TGALIE
Trigger: CTCTATAAGGGCTCCAGTCCAGAGACCCTGGGCCAT...AGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGAGGAGCAAGTTCAATaGCCCAGGGTCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSEEQVQ*PRVSGL
Trigger: CAGTCCAGAGACCCTGGGCCATTGAACTTGCTCCTC...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGCATGGCGGTCTCCTCTaGGATGCAAGAAGCCAGATC +
Preference number: 4 (lower is better)
Translates to: GAGGGAGLILGTQAGWGAHGGLL*DARSQI
Trigger: GATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATG...CGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGAGGAAGGGCCCGCATaGCGGTCTCCTCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCEEGPA*RSPLGC
Trigger: GCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTC...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCGCGAAGATGAAGAGCTaGGGCAGGCGGAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSAKMKS*GRRKWW
Trigger: CCACCACTTCCGCCTGCCCCAGCTCTTCATCTTCGC...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCCTGAGGGCCTGGAGGTaGTGTGCGGACTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPLRAWR*CADSAS
Trigger: AGAGGCTGAGTCCGCACATCACCTCCAGGCCCTCAG...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCTCAGGGCAATCCAGGTaGCATAGGTGCGACGGCCCC +
Preference number: 4 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPSGQSR*HRCDGP
Trigger: GGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGA...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCACAGTCCTGGGGCCTaGAGCTCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSHSPGA*SSPHTA
Trigger: AGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCATCAGTTTCTCTGCCTaGACGAGGCTGTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLISFSA*TRLCSA
Trigger: GGCACTGCACAGCCTCGTTCAGGCAGAGAAACTGAT...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTTACATGCCCACCATCTaGAGATACTTCACGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSYMPTI*RYFTAR
Trigger: TCGGGCCGTGAAGTATCTGCAGATGGTGGGCATGTA...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGTCCTCAGGCCTCTGCTaGAGCCCCTCCTACACCCAG +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWSSGLC*SPSYTQ
Trigger: CTGGGTGTAGGAGGGGCTGCAGCAGAGGCCTGAGGA...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCGATCCAGTGCCATTCTaGTCAGCCAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGDPVPF*SARTPG
Trigger: CCCCGGGGTCCTGGCTGAGCAGAATGGCACTGGATC...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCGTCCCGGGTGTCCAGTaGCCTCTCCTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGVPGVQ*PLLAAV
Trigger: AACAGCAGCCAGGAGAGGCCACTGGACACCCGGGAC...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCTCGGCCAGGCACAAGTaGCCAATGAAGACGTGTATG +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPSARHK*PMKTCM
Trigger: CATACACGTCTTCATTGGCCACTTGTGCCTGGCCGA...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGACAGCTGCTGACACGTaGGCTCCCTCACCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRTAADT*APSPGL
Trigger: CAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGT...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPSSSQS*PQLLTR
Trigger: ACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGA...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSSSSQS*PQLLTR
Trigger: ACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGA...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGGTGCAGGACTCATCTTaGGGACCCAGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWVQDSS*GPRLGG
Trigger: CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCAC...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCTCCTCATACAGCTaGGGATGTGGAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSLSSYS*GCGDPG
Trigger: GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGTCCCATAGAGATGCCAGCATaGCAGATGCCTGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LAVVQDSSWGPRLGGVRPIEMPA*QMPVGV
Trigger: CACGCCAACAGGCATCTGCCATGCTGGCATCTCTAT...GGGACGCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTGAACTGGGAGCCACATaGGCAGGCACTACATGGAAC +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPELGAT*AGTTWN
Trigger: GTTCCATGTAGTGCCTGCCCATGTGGCTCCCAGTTC...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRGTRLA*ISRKMS
Trigger: GCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCC...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp CGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGGGTAGGTGCCACGAACACCGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: RKMSTWQAAIPRVGATNTGTRLA*ISRKMS
Trigger: GCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCC...GGTGTTCGTGGCACCTACCCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGGCACCAGACTGGCATaGATCTCCCGGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVGTRLA*ISRKMS
Trigger: GCTCATCTTCCGGGAGATTCATGCCAGTCTGGTGCC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGCCAGCACCAGGCCATTaGTCAGGGCCACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWPAPGH*SGPQPQ
Trigger: TTGTGGCTGTGGCCCTGAGCAATGGCCTGGTGCTGG...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCTACATGCCCACCATCTaGAGATACTTCACGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLYMPTI*RYFTAR
Trigger: TCGGGCCGTGAAGTATCTGCAGATGGTGGGCATGTA...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGATACCCAGGGTAGGTaGCACGAACACCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVDTQGR*HEHHQG
Trigger: GCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GGAGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTTGCGGACTCAGCCTCTaGCTGAGGAGCAAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: GGAGGGAGLILGTQAGWGCGLSL*LRSKFN
Trigger: ATTGAACTTGCTCCTCAGGCAGAGGCTGAGTCCGCA...ACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp GCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCGGGGCCACAGGCTCTGTCGGCCAGGCACAAGTaGCCAATGAAGACGTGTATG +
Preference number: 4 (lower is better)
Translates to: AVACPGPHSVPASGPQALSARHK*PMKTCM
Trigger: CATACACGTCTTCATTGGCCACTTGTGCCTGGCCGA...CAGAGCCTGTGGCCCCGAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGACTGGCATGAATCTCCCGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGCGGAAGATGAGCACCTaGCAGGCGGCGATACCCAGG +
Preference number: 4 (lower is better)
Translates to: QTGMNLPEDEHLAGGDTQRKMST*QAAIPR
Trigger: CCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCG...CTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTCATGCCAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATACAGCTGCTGACACGTaGGCTCCCTCACCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDTAADT*APSPGL
Trigger: CAGCCCCGGTGAGGGAGCCCACGTGTCAGCAGCTGT...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPSSSQS*PQLLTR
Trigger: ACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGA...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCACGATGAAGTGTCCTTaGCCAGGGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGTMKCP*PGRSWR
Trigger: CCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGT...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGTCCTTTTCAGGCCCCTaGGACCGCTGTCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWSFSGP*DRCLTW
Trigger: CCAGGTGAGACAGCGGTCCCAGGGGCCTGAAAAGGA...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGGTGTCGGTGGCAGTATaGCCAGTCCTGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRVSVAV*PVLAGL
Trigger: GAGCCCAGCCAGGACTGGCCATACTGCCACCGACAC...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR TCA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGGAATCTCCCGGAAGATaGGCACCTGGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWESPGR*APGRRR
Trigger: TCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTC...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp ACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGAGGACACGCTGCTGCTaGAAGATGCATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TGSGQFSTGPPPSGSQDQRTRCC*KMHRSR
Trigger: CCTGGATCTATGCATCTTTCAGCAGCAGCGTGTCCT...CTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRNSSSR*SVLGQG
Trigger: TCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTT...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp GGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTCAGGAGGAGGCATACATaGCCACCATCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: GDPGRGCGLSRATQCPSLRRRHT*PPSADT
Trigger: AGTATCTGCAGATGGTGGGCATGTATGCCTCCTCCT...GAGGCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp TTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCCTCCCTCACCGGGGCTaGCTGTCCGGCGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FSKPLEARHPTAPHDEVSLPHRG*LSGVPC
Trigger: GCAGGGGACGCCGGACAGGCAGCCCCGGTGAGGGAG...GGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp AGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCGCTGCTGCTGAAAGATaGATAGATCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SVPASGPQALANSPRVPLAAAER*IDPGVG
Trigger: ACCAACCCCTGGATCTATGCATCTTTCAGCAGCAGC...GAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CAGACTGGCATGAATCTCCCGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QTGMNLPEDEHLAGGDTQRSWRW*RTHLGD
Trigger: GTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT...CTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTCATGCCAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp ACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGTGCGGACTCAGCCTCTaGCTGAGGAGCAAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TGSGQFSTGPPPSGSQDQCGLSL*LRSKFN
Trigger: ATTGAACTTGCTCCTCAGGCAGAGGCTGAGTCCGCA...CTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWACWRV*TCRWQY
Trigger: ATACTGCCACCGACACGTGCACACACGCCAACAGGC...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCCAGCCACAAAGACTATaGAGAGCAGCGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGQPQRL*RAAPAP
Trigger: CGGAGCTGGCGCTGCTCTCCATAGTCTTTGTGGCTG...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp GCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGACACGGAAGCGGTCGGTaGCCTTCCAGGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAELLKASRGKTPNSSSRHGSGR*PSRPAG
Trigger: CCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTG...TCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCCCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPPSTLR*AKMKSW
Trigger: CCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGG...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATGTGCAGGACTCATCTTaGGGACCCAGGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDVQDSS*GPRLGG
Trigger: CCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCAC...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATTGGGTTCAGGATGGCTaGTGGGGCACAGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDWVQDG*WGTGAC
Trigger: GCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCA...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGTGCAGGGTGGAGGATCTAGGTTaGGTTCAGGATGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLLTMKCPWPGRSWRWCRVEDLG*VQDGWW
Trigger: CCACCAGCCATCCTGAACCCAACCTAGATCCTCCAC...CCTGCACCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR TCA 90 bp GCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGAAAGTGGTGGACGCCATaGGCATGGTGGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAELLKASRGKTPNSSSRKWWTP*AWWGWG
Trigger: GCCCCAGCCCCACCATGCTCATGGCGTCCACCACTT...TCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp CAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QSWGLKLSSYSWGCGDPGNSSSR*SVLGQG
Trigger: TCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTT...GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp GAGGATCTAGGTTGGGTTCAGGATGGCTGGTGGGGCACAGGGGCATGCGGCCAAAACAGCTCCTCACGATaGAGTGTCCTTGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EDLGWVQDGWWGTGACGQNSSSR*SVLGQG
Trigger: TCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTT...TTGGCCGCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCTAGATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGGCGAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRAKMKS*GRLRRS
Trigger: GCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGC...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGGCCCTGGCACCAGACTaGCATGAATCTCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRALAPD*HESPGR
Trigger: TCTTCCGGGAGATTCATGCCAGTCTGGTGCCAGGGC...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCTCTCCTCATACAGCTaGGGATGTGGAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRLSSYS*GCGDPG
Trigger: GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAG...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp CACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGAGGACACGCTGCTGCTaGAAGATGCATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: HPTAPHDEVSLAREELAVRTRCC*KMHRSR
Trigger: CCTGGATCTATGCATCTTTCAGCAGCAGCGTGTCCT...CACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTAGGACACGCTGCTGCTaGAAGATGCATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCRTRCC*KMHRSR
Trigger: CCTGGATCTATGCATCTTTCAGCAGCAGCGTGTCCT...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CCA 90 bp GAGGATCTAGGTTGGGTTCAGGATGGCTGGTGGGGCACAGGGGCATGCGGCCAATCGGCCAGGCACAAGTaGCCAATGAAGACGTGTATG +
Preference number: 4 (lower is better)
Translates to: EDLGWVQDGWWGTGACGQSARHK*PMKTCM
Trigger: CATACACGTCTTCATTGGCCACTTGTGCCTGGCCGA...TTGGCCGCATGCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCTAGATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATGCGAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDAKMKS*GRLRRS
Trigger: GCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGC...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCTCTCCTCATACAGCTaGGGATGTGGAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWLSSYS*GCGDPG
Trigger: GCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAG...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGCCTCCCCTAGCAATGTaGCCAGGCCCGTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLAREPPLAM*PGPWQS
Trigger: AGATTGCCACGGGCCTGGCCACATTGCTAGGGGAGG...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGGCACAAGTGGCCAATaGAGACGTGTATGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLAREGTSGQ*RRVWVP
Trigger: GGGCACCCATACACGTCTTCATTGGCCACTTGTGCC...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR TCA 90 bp TTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCAGGCCCAGCAGTCAGTaGCCCCGCTGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: FSKPLEARHPTAPHDEVSRPSSQ*PRCHLP
Trigger: TGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCT...GGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp GCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGACCAGCACCAGGCCATTaGTCAGGGCCACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: AAELLKASRGKTPNSSSRPAPGH*SGPQPQ
Trigger: TTGTGGCTGTGGCCCTGAGCAATGGCCTGGTGCTGG...TCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp GGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTAGGAGGAGGCATACATaGCCACCATCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: GLKLSSYSWGCGDPGRGCRRRHT*PPSADT
Trigger: AGTATCTGCAGATGGTGGGCATGTATGCCTCCTCCT...ACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337474.5
ENST00000646375.1
CDS-3UTR GCA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGGCTGCTGCTGAAAGATaGATAGATCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWAAAER*IDPGVG
Trigger: ACCAACCCCTGGATCTATGCATCTTTCAGCAGCAGC...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp AAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGAGCTGGCGGTGGTaGAGGACTCATCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KPLEARHPTAPHDEVSLARSWRW*RTHLGD
Trigger: GTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT...GGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp CAGACTGGCATGAATCTCCCGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGCAGATCAGGATCCAGTaGCATTCTGCTCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QTGMNLPEDEHLAGGDTQQIRIQ*HSAQPG
Trigger: TCCTGGCTGAGCAGAATGGCACTGGATCCTGATCTG...CTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTCATGCCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp CAGACTGGCATGAATCTCCCGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGCGGTCTCCTCTGGGATaGAAGAAGCCAGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: QTGMNLPEDEHLAGGDTQRSPLG*KKPDQD
Trigger: ATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCG...CTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCGGGAGATTCATGCCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGAACGAGGCTGTGCAGTaGCGGATCTCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLARENEAVQ*RISAAG
Trigger: ACCTGCTGCTGAGATCCGGCACTGCACAGCCTCGTT...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGTCCCGGGTGTCCAGTaGCCTCTCCTGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDVPGVQ*PLLAAV
Trigger: AACAGCAGCCAGGAGAGGCCACTGGACACCCGGGAC...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGCAGCCACAAAGACTATaGAGAGCAGCGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLAREQPQRL*RAAPAP
Trigger: CGGAGCTGGCGCTGCTCTCCATAGTCTTTGTGGCTG...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp CTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGCCCTGGCACCAGACTaGCATGAATCTCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LEARHPTAPHDEVSLAREALAPD*HESPGR
Trigger: TCTTCCGGGAGATTCATGCCAGTCTGGTGCCAGGGC...CTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp AGGCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACATACAGCTGGGGATGTaGAGACCCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQLSFSKPLEARHPTAPHIQLGM*RPRQGL
Trigger: CAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTAT...GTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATAGGTTGGGTTCAGGATaGCTGGTGGGGCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDRLGSG*LVGHRG
Trigger: GCCCCTGTGCCCCACCAGCCATCCTGAACCCAACCT...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGATAGAGATGCCAGCATaGCAGATGCCTGTTGGCGTG +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRIEMPA*QMPVGV
Trigger: CACGCCAACAGGCATCTGCCATGCTGGCATCTCTAT...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS-3UTR TCA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGGGCTGGCCAGCAACATaGGTAGCACAAAGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVGWPAT*VAQRAP
Trigger: GGGCGCCCTTTGTGCTACTCATGTTGCTGGCCAGCC...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR TCA 90 bp AGGCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGACTCAGCCTCTGCCTaGGGAGCAAGTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: RQLSFSKPLEARHPTAPHDSASA*GASSMA
Trigger: GGCCATTGAACTTGCTCCTCAGGCAGAGGCTGAGTC...GTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATCCAGTCCTTTTGGGGTaGGCAGACAACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDPVLLG*ADNHLL
Trigger: AAGGAGATGGTTGTCTGCTCACCCCAAAAGGACTGG...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp AGGCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATACCCAGGGTAGGTaGCACGAACACCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQLSFSKPLEARHPTAPHDTQGR*HEHHQG
Trigger: GCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATC...GTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp ACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGGCTGCTGCTGAAAGATaGATAGATCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: TVLGPEALLIQLGMWRPRAAAER*IDPGVG
Trigger: ACCAACCCCTGGATCTATGCATCTTTCAGCAGCAGC...CCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR GCA 90 bp GCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGACACTACATGGAACTGTaGCAGGAGAGAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAELLKASRGKTPNSSSRHYMEL*QERGPG
Trigger: CCCAGGGCCTCTCTCCTGGCACAGTTCCATGTAGTG...TCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp GCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGAGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: AAELLKASRGKTPNSSSRACWRV*TCRWQY
Trigger: ATACTGCCACCGACACGTGCACACACGCCAACAGGC...TCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CGGGCACAGCAGAGCAAGCTTCGCAGCTCTGAGGACACGCTGCTGCTGAAAGATTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: RAQQSKLRSSEDTLLLKDSSSQS*PQLLTR
Trigger: ACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGA...ATCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATACGATGAAGTGTCCTTaGCCAGGGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDTMKCP*PGRSWR
Trigger: CCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGT...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGATACCCAGGGTAGGTaGCACGAACACCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDDTQGR*HEHHQG
Trigger: GCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATC...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCTTCCAGGCCAGCTaGGGCAGCACTTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLAFQAS*GSTWNR
Trigger: TCTGTTCCAAGTGCTGCCCCAGCTGGCCTGGAAGGC...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR CCA 90 bp AGGCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACATGGCCCAGGGTCTCTaGACTGGAGCCCTTATAGAG +
Preference number: 4 (lower is better)
Translates to: RQLSFSKPLEARHPTAPHMAQGL*TGALIE
Trigger: CTCTATAAGGGCTCCAGTCCAGAGACCCTGGGCCAT...GTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp CAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGTATGGCCAGTCCTTTTaGGGTGAGCAGACAACCATC +
Preference number: 4 (lower is better)
Translates to: QDTQQLLTMKCPWPGRSWYGQSF*GEQTTI
Trigger: GATGGTTGTCTGCTCACCCCAAAAGGACTGGCCATA...CCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR TCA 90 bp TTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCCAAGCTTCGCAGCTCTaGGGACACGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FSKPLEARHPTAPHDEVSQASQL*GHAAAE
Trigger: TTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTG...GGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR GCA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGTGCCAGCATGGCAGATaGCTGTTGGCGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLCQHGR*LLACVH
Trigger: GTGCACACACGCCAACAGGCATCTGCCATGCTGGCA...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGCCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLPSTLR*AKMKSW
Trigger: CCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGG...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CCA 90 bp CAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATTGGGCAGGCACTACATaGAACTGTGCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QLSFSKPLEARHPTAPHDWAGTT*NCARRE
Trigger: CTCTCTCCTGGCACAGTTCCATGTAGTGCCTGCCCA...ATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp TTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCGAGGAGCAAGTTCAATaGCCCAGGGTCTCTGGACTG +
Preference number: 4 (lower is better)
Translates to: FSKPLEARHPTAPHDEVSEEQVQ*PRVSGL
Trigger: CAGTCCAGAGACCCTGGGCCATTGAACTTGCTCCTC...GGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CCA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGGTGTGCACGTGTCGGTaGCAGTATGGCCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVVCTCR*QYGQSF
Trigger: AAAGGACTGGCCATACTGCCACCGACACGTGCACAC...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR GCA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGTACATGCCCACCATCTaGAGATACTTCACGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLYMPTI*RYFTAR
Trigger: TCGGGCCGTGAAGTATCTGCAGATGGTGGGCATGTA...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp TTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCAGGAGGAGGCATACATaGCCACCATCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: FSKPLEARHPTAPHDEVSRRRHT*PPSADT
Trigger: AGTATCTGCAGATGGTGGGCATGTATGCCTCCTCCT...GGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS-3UTR GCA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCTGCTGCTGAAAGATaGATAGATCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLAAAER*IDPGVG
Trigger: ACCAACCCCTGGATCTATGCATCTTTCAGCAGCAGC...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS CCA 90 bp TCGGCCAGGCACAAGTGGCCAATGAAGACGTGTATGGGTGCCCAGTaGCCCCGCCGGCCCCGCCGAGCTAGGGCCGCCAGCACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SARHKWPMKTCMGAQ*PRRPRRARAASTRP
Trigger: TGGCCTGGTGCTGGCGGCCCTAGCTCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACACGTCTTCATTGGCCACTTGTGCCTGGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS GCA 90 bp GTGGCCCCGTCAGCCCTAGCCACGGCTACACCCACCTTCCAGAGGTaGCTCCGGGTCCCACGCGGCCCACAGCTGCACCAGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: VAPSALATATPTFQR*LRVPRGPQLHQEEG
Trigger: CCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTGGGACCCGGAGGCACCTCTGGAAGGTGGGTGTAGCCGTGGCTAGGGCTGACGGGGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS CCA 90 bp CCGGCCGGTTCCAGTGAGCCCCACTTCCATGGCGGTACGCCAGCATaGGACGGCAGATGGCACGGTGGCGGTCCAGCGTCATGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PAGSSEPHFHGGTPA*DGRWHGGGPASWPG
Trigger: TCCTGGCCATGACGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGCTGGCGTACCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS-3UTR CAA 90 bp CCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGTGCAGGACTCATCTaGGGGACCCAGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSLGATGSGQFSTGPPPSGAGLI*GTQAGW
Trigger: CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACC...ACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp GCTCTGGCCAATTCTCCACGGGTCCCCCTCCCAGTGGCTCCCAGGACCAGCCCCGGCAGGGGCTGTGGCTaGTCCAGGGCCACACAGTGT +
Preference number: 5 (lower is better)
Translates to: ALANSPRVPLPVAPRTSPGRGCG*SRATQC
Trigger: ACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCC...GGGGCTGGTCCTGGGAGCCACTGGGAGGGGGACCCGTGGAGAATTGGCCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS CCA 90 bp ACTTCACGGCCCGACACAGGGCATCTGGCCCACGGAAGCGGTCGGTaGCCTTCCAGGCCAGCTGGGGCAGCACTTGGAACAGAGCCACGG +
Preference number: 5 (lower is better)
Translates to: TSRPDTGHLAHGSGR*PSRPAGAALGTEPR
Trigger: CCGTGGCTCTGTTCCAAGTGCTGCCCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGGGCCGTGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS-3UTR CAA 90 bp AGGAGCTGGCGGTGGTGCAGGACTCATCTTGGGGACCCAGGCTGGGTGGGGTGCGGTGCAGGACTCATCTaGGGGACCCAGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: RSWRWCRTHLGDPGWVGCGAGLI*GTQAGW
Trigger: CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACC...GCACCCCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACCACCGCCAGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CAA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTGGCAGGGGCTGTGGCTaGTCCAGGGCCACACAGTGT +
Preference number: 5 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPGRGCG*SRATQC
Trigger: ACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCC...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS CCA 90 bp CATGCCCACCATCTGCAGATACTTCACGGCCCGACACAGGGCATCTaGCCCACGGAAGCGGTCGGTGGCCTTCCAGGCCAGCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HAHHLQILHGPTQGI*PTEAVGGLPGQLGQ
Trigger: CTGCCCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGGGCCGTGAAGTATCTGCAGATGGTGGGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 90 bp CAGGCCCAGCAGTCAGTGACCCCGCTGCCACCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGGGGCAGGCGGAAGTGGTGGACGCCA +
Preference number: 5 (lower is better)
Translates to: QAQQSVTPLPPSTLR*AKMKSWGRRKWWTP
Trigger: TGGCGTCCACCACTTCCGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 90 bp GCCATTCTGCTCAGCCAGGACCCCGGGGAGGAACTGGGAGCCACATaGGCAGGCACTACATGGAACTGTGCCAGGAGAGAGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: AILLSQDPGEELGAT*AGTTWNCARREALG
Trigger: GCCCAGGGCCTCTCTCCTGGCACAGTTCCATGTAGTGCCTGCCCATGTGGCTCCCAGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CAA 90 bp CAGTGTCCCAGCCTCGGGGCCACAGGCTCTGGCCAATTCTCCACGGGTCCCCCTCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: QCPSLGATGSGQFSTGPPLPPST*RWAKMK
Trigger: CTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAG...AGGGGGACCCGTGGAGAATTGGCCAGAGCCTGTGGCCCCGAGGCTGGGACACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCGGTGCAGGACTCATCTaGGGGACCCAGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVGAGLI*GTQAGW
Trigger: CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACC...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSHDEVS*AREELA
Trigger: CGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS TCA 90 bp AGAAGGAGCGAGAAGGCCCAAGCCACTAGCACCGGCCGGTTCCAGTaGGCCCCACTTCCATGGCGGTACGCCAGCATGGGACGGCAGATG +
Preference number: 5 (lower is better)
Translates to: RRSEKAQATSTGRFQ*APLPWRYASMGRQM
Trigger: CATCTGCCGTCCCATGCTGGCGTACCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGTGCTAGTGGCTTGGGCCTTCTCGCTCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 90 bp ACCCCGCTGCCACCTTCCACGTTGCGCTGGGCGAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGCGAGAAGGCCCAAGCCACTAGCACC +
Preference number: 5 (lower is better)
Translates to: TPLPPSTLRWAKMKS*GRLRRSEKAQATST
Trigger: GGTGCTAGTGGCTTGGGCCTTCTCGCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS-3UTR CAA 90 bp TGTGGAGACCCAGGCAGGGGCTGTGGCTTGTCCAGGGCCACACAGTGTCCCAGCCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: CGDPGRGCGLSRATQCPSLPPST*RWAKMK
Trigger: CTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAG...GCTGGGACACTGTGTGGCCCTGGACAAGCCACAGCCCCTGCCTGGGTCTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCGGTGCAGGACTCATCTaGGGGACCCAGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPGAGLI*GTQAGW
Trigger: CCACCCAGCCTGGGTCCCCAAGATGAGTCCTGCACC...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp GAGGGAGGGATTAGAAAGGCGGAGACAGGAAGGTCCCCTGGCCCCAGCCTGGTCCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: EGGIRKAETGRSPGPSLVHDEVS*AREELA
Trigger: CGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTG...GACCAGGCTGGGGCCAGGGGACCTTCCTGTCTCCGCCTTTCTAATCCCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS-3UTR CAA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWHDEVS*AREELA
Trigger: CGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTG...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS GCA 90 bp CTCCCGGAAGATGAGCACCTGGCAGGCGGCGATACCCAGGGTAGGTaGCACGAACACCATCAGGGCAATCCAGGTGACATAGGTGCGACG +
Preference number: 5 (lower is better)
Translates to: LPEDEHLAGGDTQGR*HEHHQGNPGDIGAT
Trigger: CGTCGCACCTATGTCACCTGGATTGCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATCGCCGCCTGCCAGGTGCTCATCTTCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000434679.6
ENST00000646375.1
CDS GCA 90 bp GGCAGGTGTTCTGAGGGCCTGGAGGTGATGTGCGGACTCAGCCTCTaGCTGAGGAGCAAGTTCAATGGCCCAGGGTCTCTGGACTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRCSEGLEVMCGLSL*LRSKFNGPGSLDWS
Trigger: GCTCCAGTCCAGAGACCCTGGGCCATTGAACTTGCTCCTCAGGCAGAGGCTGAGTCCGCACATCACCTCCAGGCCCTCAGAACACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430697.1
ENST00000434679.6
ENST00000646375.1
CDS GCA 90 bp CATGGCGGTCTCCTCTGGGATGCAAGAAGCCAGATCAGGATCCAGTaGCATTCTGCTCAGCCAGGACCCCGGGGAGGAACTGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: HGGLLWDARSQIRIQ*HSAQPGPRGGTGSH
Trigger: GTGGCTCCCAGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CAA 90 bp ACCCAACAGCTCCTCACGATGAAGTGTCCTTGGCCAGGGAGGAGCTGGCGGTGGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: TQQLLTMKCPWPGRSWRWLPPST*RWAKMK
Trigger: CTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAG...CCACCGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTGAGGAGCTGTTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CAA 90 bp CCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCAGGCAGGGGCTGTGGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: PEALLIQLGMWRPRQGLWLPPST*RWAKMK
Trigger: CTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAG...CCACAGCCCCTGCCTGGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS GCA 90 bp TCTCCTCTGGGATGCAAGAAGCCAGATCAGGATCCAGTGCCATTCTaGTCAGCCAGGACCCCGGGGAGGAACTGGGAGCCACATGGGCAG +
Preference number: 5 (lower is better)
Translates to: SPLGCKKPDQDPVPF*SARTPGRNWEPHGQ
Trigger: CTGCCCATGTGGCTCCCAGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 90 bp AGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTATGGCCAGTCCTGGCTGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPYRDASMADACWRV*TCRWQYGQSWLGSW
Trigger: CCAGGAGCCCAGCCAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS-3UTR CAA 90 bp CCCACAGTCCTGGGGCCTGAAGCTCTCCTCATACAGCTGGGGATGTGGAGACCCGTCATCCTCACAGTCTaGGCCACAGCTGCTGACACG +
Preference number: 5 (lower is better)
Translates to: PTVLGPEALLIQLGMWRPVILTV*ATAADT
Trigger: CGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGAC...GGGTCTCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337474.5
ENST00000434679.6
ENST00000646375.1
CDS GCA 90 bp GGGAAGAATCTGGAGGAAGGGCCCGCATGGCGGTCTCCTCTGGGATaGAAGAAGCCAGATCAGGATCCAGTGCCATTCTGCTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GKNLEEGPAWRSPLG*KKPDQDPVPFCSAR
Trigger: CCTGGCTGAGCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTCCAGATTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 90 bp CTGGACTGGAGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTaGCGTGTGTGCACGTGTCGGTGGCAGTATGGCCAGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LDWSPYRDASMADAC*RVCTCRWQYGQSWL
Trigger: CAGCCAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCTCCAGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS GCA 90 bp AGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTATGGCCAGTCCTTTTGGGGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SPYRDASMADACWRV*TCRWQYGQSFWGEQ
Trigger: CTGCTCACCCCAAAAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 90 bp AGCCTCTGCCTGAGGAGCAAGTTCAATGGCCCAGGGTCTCTGGACTaGAGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTGGCGT +
Preference number: 5 (lower is better)
Translates to: SLCLRSKFNGPGSLD*SPYRDASMADACWR
Trigger: ACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCTCCAGTCCAGAGACCCTGGGCCATTGAACTTGCTCCTCAGGCAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430697.1
ENST00000434679.6
ENST00000646375.1
CDS CCA 90 bp CTGGACTGGAGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTaGCGTGTGTGCACGTGTCGGTGGCAGTATGGCCAGTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: LDWSPYRDASMADAC*RVCTCRWQYGQSFW
Trigger: CCAAAAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCTCCAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CAA 90 bp AGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGCACGATGAAGTGTCCTaGGCCAGGGAGGAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: SFSKPLEARHPTAPHDEVHDEVS*AREELA
Trigger: CGCCAGCTCCTCCCTGGCCAAGGACACTTCATCGTG...CACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370049.1
ENST00000434679.6
CDS-3UTR CAA 90 bp AGGCAGCTGAGCTTCTCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATCTCAGCAGCAGGTaGGGACCTCCCCTAGCAATG +
Preference number: 5 (lower is better)
Translates to: RQLSFSKPLEARHPTAPHDLSSR*GPPLAM
Trigger: CATTGCTAGGGGAGGTCCCAACCTGCTGCTGAGATC...GTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGAGAAGCTCAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 90 bp AGTCCTTTTGGGGTGAGCAGACAACCATCTCCTTATCAGTTTCTCTaGCTGAACGAGGCTGTGCAGTGCCGGATCTCAGCAGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SPFGVSRQPSPYQFL*LNEAVQCRISAAGW
Trigger: CCAACCTGCTGCTGAGATCCGGCACTGCACAGCCTCGTTCAGGCAGAGAAACTGATAAGGAGATGGTTGTCTGCTCACCCCAAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 90 bp CTTCCTGTTGTTAAACTAGGGAAGAATCTGGAGGAAGGGCCCGCATaGCGGTCTCCTCTGGGATGCAAGAAGCCAGATCAGGATCCAGTG +
Preference number: 5 (lower is better)
Translates to: LPVVKLGKNLEEGPA*RSPLGCKKPDQDPV
Trigger: CACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTCCAGATTCTTCCCTAGTTTAACAACAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS-3UTR CAA 90 bp TCAAAGCCTCTAGAGGCAAGACACCCAACAGCTCCTCACGATGAAGTGTCCTTGGGTGGAGGATCTAGGTaGGGTTCAGGATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SKPLEARHPTAPHDEVSLGGGSR*GSGWLV
Trigger: CACCAGCCATCCTGAACCCAACCTAGATCCTCCACC...CAAGGACACTTCATCGTGAGGAGCTGTTGGGTGTCTTGCCTCTAGAGGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS TCA 72 bp GGCCCCAGGGCTCCGCAAAGCAGGCCCAGCAGTCAGTaGCCCCGCTGCCACCTTCCACGTTGCGCTGGGCGA +
Preference number: 6 (lower is better)
Translates to: GPRAPQSRPSSQ*PRCHLPRCAGR
Trigger: TCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCTGCTTTGCGGAGCCCTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000434679.6
ENST00000646375.1
CDS GCA 72 bp TCAGCCCTAGCCACGGCTACACCCACCTTCCAGAGGTaGCTCCGGGTCCCACGCGGCCCACAGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: SALATATPTFQR*LRVPRGPQLHQ
Trigger: CTGGTGCAGCTGTGGGCCGCGTGGGACCCGGAGGCACCTCTGGAAGGTGGGTGTAGCCGTGGCTAGGGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370049.1
CDS CAA 72 bp GCCCAGCAGTCAGTGACCCCGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAGAGCTGGGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: AQQSVTPLPPST*RWAKMKSWGRR
Trigger: CCGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS TCA 72 bp CCCCGCTGCCACCTTCCACGTTGCGCTGGGCGAAGATaGAGAGCTGGGGCAGGCGGAAGTGGTGGACGCCAT +
Preference number: 6 (lower is better)
Translates to: PRCHLPRCAGRR*RAGAGGSGGRH
Trigger: ATGGCGTCCACCACTTCCGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp CCAGGCCATTGCTCAGGGCCACAGCCACAAAGACTATaGAGAGCAGCGCCAGCTCCGCCCGGGCTAGCAGCG +
Preference number: 6 (lower is better)
Translates to: PGHCSGPQPQRL*RAAPAPPGLAA
Trigger: CGCTGCTAGCCCGGGCGGAGCTGGCGCTGCTCTCCATAGTCTTTGTGGCTGTGGCCCTGAGCAATGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp TCCAGTGAGCCCCACTTCCATGGCGGTACGCCAGCATaGGACGGCAGATGGCACGGTGGCGGTCCAGCGTCA +
Preference number: 6 (lower is better)
Translates to: SSEPHFHGGTPA*DGRWHGGGPAS
Trigger: TGACGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGCTGGCGTACCGCCATGGAAGTGGGGCTCACTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CAA 72 bp GCCCAGCAGTCAGTGACCCCGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAGAGCTGGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: AQQSVTPLPPST*RWAKMKSWGRL
Trigger: CAGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CAA 90 bp GCAAAGCAGGCCCAGCAGTCAGTGACCCCGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAGAGCTGGGGCAGGCGGAAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: AKQAQQSVTPLPPST*RWAKMKSWGRRKWW
Trigger: CCACCACTTCCGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCTGCTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS TCA 72 bp GAGAAGGCCCAAGCCACTAGCACCGGCCGGTTCCAGTaGGCCCCACTTCCATGGCGGTACGCCAGCATGGGA +
Preference number: 6 (lower is better)
Translates to: EKAQATSTGRFQ*APLPWRYASMG
Trigger: TCCCATGCTGGCGTACCGCCATGGAAGTGGGGCTCACTGGAACCGGCCGGTGCTAGTGGCTTGGGCCTTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp CATCTGCAGATACTTCACGGCCCGACACAGGGCATCTaGCCCACGGAAGCGGTCGGTGGCCTTCCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: HLQILHGPTQGI*PTEAVGGLPGQ
Trigger: CTGGCCTGGAAGGCCACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGGGCCGTGAAGTATCTGCAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp CAGGCACTACATGGAACTGTGCCAGGAGAGAGGCCCTaGGCAGCCACCCCTCGGGGGCCAAGAAAGATGGGG +
Preference number: 6 (lower is better)
Translates to: QALHGTVPGERP*AATPRGPRKMG
Trigger: CCCCATCTTTCTTGGCCCCCGAGGGGTGGCTGCCCAGGGCCTCTCTCCTGGCACAGTTCCATGTAGTGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp CAGTCAGTGACCCCGCTGCCACCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGGGGCAGGCGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: QSVTPLPPSTLR*AKMKSWGRRKW
Trigger: CCACTTCCGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CAA 72 bp GAACGAGGCTGTGCAGTGCCGGATCTCAGCAGCAGGTaGGGACCTCCCCTAGCAATGTGGCCAGGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: ERGCAVPDLSSR*GPPLAMWPGPW
Trigger: CCACGGGCCTGGCCACATTGCTAGGGGAGGTCCCAACCTGCTGCTGAGATCCGGCACTGCACAGCCTCGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CAA 90 bp GCAAAGCAGGCCCAGCAGTCAGTGACCCCGCTGCCACCTTCCACGTaGCGCTGGGCGAAGATGAAGAGCTGGGGCAGGCTGAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: AKQAQQSVTPLPPST*RWAKMKSWGRLRRS
Trigger: GCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTGCTGGGCCTGCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp CCACCTTCCACGTTGCGCTGGGCGAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGCGAGAAGGCCCAAGCC +
Preference number: 6 (lower is better)
Translates to: PPSTLRWAKMKS*GRLRRSEKAQA
Trigger: GGCTTGGGCCTTCTCGCTCCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp CAGTCAGTGACCCCGCTGCCACCTTCCACGTTGCGCTaGGCGAAGATGAAGAGCTGGGGCAGGCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: QSVTPLPPSTLR*AKMKSWGRLRR
Trigger: CCTTCTCAGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000646375.1
CDS CCA 72 bp AGCACAAAGGGCGCCCTAGCGTCATCCTCACAGTCTTaGCCACAGCTGCTGACACGTGGGCTCCCTCACCGG +
Preference number: 6 (lower is better)
Translates to: STKGALASSSQS*PQLLTRGLPHR
Trigger: CCGGTGAGGGAGCCCACGTGTCAGCAGCTGTGGCCAAGACTGTGAGGATGACGCTAGGGCGCCCTTTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430697.1
CDS CCA 72 bp ATGGCAGATGCCTGTTGGCGTGTGTGCACGTGTCGGTaGCAGTATGGCCAGTCCTGGCTGGGCTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: MADACWRVCTCR*QYGQSWLGSWA
Trigger: TGCCCAGGAGCCCAGCCAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS CAA 90 bp TCTCTGCCTGAACGAGGCTGTGCAGTGCCGGATCTCAGCAGCAGGTaGGGACCTCCCCTAGCAATGTGGCCAGGCCCGTGGCAATCTCTG +
Preference number: 6 (lower is better)
Translates to: SLPERGCAVPDLSSR*GPPLAMWPGPWQSL
Trigger: CAGAGATTGCCACGGGCCTGGCCACATTGCTAGGGGAGGTCCCAACCTGCTGCTGAGATCCGGCACTGCACAGCCTCGTTCAGGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp GTGCCATTCTGCTCAGCCAGGACCCCGGGGAGGAACTaGGAGCCACATGGGCAGGCACTACATGGAACTGTG +
Preference number: 6 (lower is better)
Translates to: VPFCSARTPGRN*EPHGQALHGTV
Trigger: CACAGTTCCATGTAGTGCCTGCCCATGTGGCTCCCAGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 72 bp GGATGCAAGAAGCCAGATCAGGATCCAGTGCCATTCTaGTCAGCCAGGACCCCGGGGAGGAACTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: GCKKPDQDPVPF*SARTPGRNWEP
Trigger: TGGCTCCCAGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 72 bp CTGGAGGAAGGGCCCGCATGGCGGTCTCCTCTGGGATaGAAGAAGCCAGATCAGGATCCAGTGCCATTCTGC +
Preference number: 6 (lower is better)
Translates to: LEEGPAWRSPLG*KKPDQDPVPFC
Trigger: GCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 72 bp AGAGATGCCAGCATGGCAGATGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTATGGCCAGTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RDASMADACWRV*TCRWQYGQSWL
Trigger: CAGCCAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646375.1
CDS GCA 72 bp GATGAGCACCTGGCAGGCGGCGATACCCAGGGTAGGTaGCACGAACACCATCAGGGCAATCCAGGTGACATA +
Preference number: 6 (lower is better)
Translates to: DEHLAGGDTQGR*HEHHQGNPGDI
Trigger: TATGTCACCTGGATTGCCCTGATGGTGTTCGTGGCACCTACCCTGGGTATCGCCGCCTGCCAGGTGCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337474.5
ENST00000370049.1
ENST00000430697.1
ENST00000434679.6
ENST00000646375.1
CDS GCA 72 bp CTCCTCTGGGATGCAAGAAGCCAGATCAGGATCCAGTaGCATTCTGCTCAGCCAGGACCCCGGGGAGGAACT +
Preference number: 6 (lower is better)
Translates to: LLWDARSQIRIQ*HSAQPGPRGGT
Trigger: AGTTCCTCCCCGGGGTCCTGGCTGAGCAGAATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS GCA 72 bp AGAGATGCCAGCATGGCAGATGCCTGTTGGCGTGTGTaGACGTGTCGGTGGCAGTATGGCCAGTCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: RDASMADACWRV*TCRWQYGQSFW
Trigger: CCAAAAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp AGAATCTGGAGGAAGGGCCCGCATGGCGGTCTCCTCTaGGATGCAAGAAGCCAGATCAGGATCCAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: RIWRKGPHGGLL*DARSQIRIQCH
Trigger: ATGGCACTGGATCCTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTCCAGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp ATGGCAGATGCCTGTTGGCGTGTGTGCACGTGTCGGTaGCAGTATGGCCAGTCCTTTTGGGGTGAGCAGACA +
Preference number: 6 (lower is better)
Translates to: MADACWRVCTCR*QYGQSFWGEQT
Trigger: TGTCTGCTCACCCCAAAAGGACTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp AGCCCTTATAGAGATGCCAGCATGGCAGATGCCTGTTaGCGTGTGTGCACGTGTCGGTGGCAGTATGGCCAG +
Preference number: 6 (lower is better)
Translates to: SPYRDASMADAC*RVCTCRWQYGQ
Trigger: CTGGCCATACTGCCACCGACACGTGCACACACGCCAACAGGCATCTGCCATGCTGGCATCTCTATAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434679.6
ENST00000646375.1
CDS GCA 72 bp GGGGTGAGCAGACAACCATCTCCTTATCAGTTTCTCTaGCTGAACGAGGCTGTGCAGTGCCGGATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: GVSRQPSPYQFL*LNEAVQCRISA
Trigger: TGCTGAGATCCGGCACTGCACAGCCTCGTTCAGGCAGAGAAACTGATAAGGAGATGGTTGTCTGCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434679.6
CDS CCA 72 bp GTTAAACTAGGGAAGAATCTGGAGGAAGGGCCCGCATaGCGGTCTCCTCTGGGATGCAAGAAGCCAGATCAG +
Preference number: 6 (lower is better)
Translates to: VKLGKNLEEGPA*RSPLGCKKPDQ
Trigger: CTGATCTGGCTTCTTGCATCCCAGAGGAGACCGCCATGCGGGCCCTTCCTCCAGATTCTTCCCTAGTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434679.6