RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AVPR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000198049

Ensembl transcript IDs: ENST00000367126.5, ENST00000612906.1

Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTGCAGCCTCTCCCAGCCTTGGAGGAGGATTCAGCATCCCAGATaGGGACAAAAGTGGACAGTATGGCCATGGTGGGACCCACCGTCA +
Preference number: 1 (lower is better)
Translates to: ACSLSQPWRRIQHPR*GQKWTVWPWWDPPS
Trigger: TGACGGTGGGTCCCACCATGGCCATACTGTCCACTTTTGTCCTCATCTGGGATGCTGAATCCTCCTCCAAGGCTGGGAGAGGCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 90 bp TGGGCAACAGAACTCAGTGAGAGGGAGACTGTGGGTCCTCCCATCTaGCTGAGCCTTGGTCCCATTAGGGTCTCACTCTCCAGTTCTCTA +
Preference number: 1 (lower is better)
Translates to: WATELSERETVGPPI*LSLGPIRVSLSSSL
Trigger: TAGAGAACTGGAGAGTGAGACCCTAATGGGACCAAGGCTCAGGCAGATGGGAGGACCCACAGTCTCCCTCTCACTGAGTTCTGTTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 90 bp GGGAAGCTATGCCATGATAAAAGTCCCCTGGAGATAATGAGCATGTaGCATGCTCTTCCTCTACCTCGGTCTACCTTGGCCTGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: GKLCHDKSPLEIMSM*HALPLPRSTLACSL
Trigger: GAGGCTGCAGGCCAAGGTAGACCGAGGTAGAGGAAGAGCATGGCACATGCTCATTATCTCCAGGGGACTTTTATCATGGCATAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp AGGGCAGATAGACAGGGAAGAAGTATTAGATGTCAGGGGCTGACATaGGCAACAGAACTCAGTGAGAGGGAGACTGTGGGTCCTCCCATC +
Preference number: 1 (lower is better)
Translates to: RADRQGRSIRCQGLT*ATELSERETVGPPI
Trigger: GATGGGAGGACCCACAGTCTCCCTCTCACTGAGTTCTGTTGCCCATGTCAGCCCCTGACATCTAATACTTCTTCCCTGTCTATCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp CAGAGACGGCATTGTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATaGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACA +
Preference number: 1 (lower is better)
Translates to: QRRHCSVSPGVSRQK*DSPQRAQSLLLAST
Trigger: TGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAACAATGCCGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR TCA 90 bp GGGACTGGCATTTGCAGAGTTCCTGCTAGGTACCAGGTACTATACTaGATCCTGCATCTCCATGAGACCATCTCCCTTCAACAGACAGCT +
Preference number: 1 (lower is better)
Translates to: GTGICRVPARYQVLY*ILHLHETISLQQTA
Trigger: AGCTGTCTGTTGAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAGCAGGAACTCTGCAAATGCCAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 90 bp GCATTTGCAGAGTTCCTGCTAGGTACCAGGTACTATACTGAATCCTaGATCTCCATGAGACCATCTCCCTTCAACAGACAGCTGGGCACA +
Preference number: 1 (lower is better)
Translates to: AFAEFLLGTRYYTES*ISMRPSPFNRQLGT
Trigger: TGTGCCCAGCTGTCTGTTGAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAGCAGGAACTCTGCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp ACAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTaGATCACAGCATCCATATGGTTCATGGTGGAAGCTCTGAAGAGC +
Preference number: 1 (lower is better)
Translates to: TDTEGRAEIQTRAPN*ITASIWFMVEALKS
Trigger: GCTCTTCAGAGCTTCCACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp GGTCCCATTAGGGTCTCACTCTCCAGTTCTCTAGCACTGAAGGACTaGGACGCTTTGCTCACTCACAACATTCAGCAAGGCTCTTTTCTT +
Preference number: 1 (lower is better)
Translates to: GPIRVSLSSSLALKD*DALLTHNIQQGSFL
Trigger: AAGAAAAGAGCCTTGCTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAGACCCTAATGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTaGCCAGCCAGAGACGGCATTGTTCAGTTTCTCCTGGGGTTAGCC +
Preference number: 1 (lower is better)
Translates to: YCHSQSQDGINNLHK*PARDGIVQFLLGLA
Trigger: GGCTAACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp AGGGGTGAGATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTaGTGTTCCTTCTACCTCCCAGTCATCATGAAGAACAAAGATTTA +
Preference number: 1 (lower is better)
Translates to: RGEIKMQTQVFGAHS*CSFYLPVIMKNKDL
Trigger: TAAATCTTTGTTCTTCATGATGACTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGATCTCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 90 bp CAATCTGGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTaGTCTATCTCTAGTCTACAATCTTACAAATCCCTCCCAACAAAG +
Preference number: 1 (lower is better)
Translates to: QSGARPLFPSLTSVE*SISSLQSYKSLPTK
Trigger: CTTTGTTGGGAGGGATTTGTAAGATTGTAGACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCCAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTaGCCTGTGCCAAACAACATAACGATTCTGAGAAATCCCCGTAGT +
Preference number: 1 (lower is better)
Translates to: DLFTYKTQTHYLGKY*PVPNNITILRNPRS
Trigger: ACTACGGGGATTTCTCAGAATCGTTATGTTGTTTGGCACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR TCA 90 bp AAATCCCTCCCAACAAAGTGGGCATTGCTATTTCTATTTAATAAATaGAGAAAGCATTGCTGGGGGAGATTGGATAACTTGCTTAAGTTG +
Preference number: 1 (lower is better)
Translates to: KSLPTKWALLFLFNK*RKHCWGRLDNLLKL
Trigger: CAACTTAAGCAAGTTATCCAATCTCCCCCAGCAATGCTTTCTTCATTTATTAAATAGAAATAGCAATGCCCACTTTGTTGGGAGGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGCGGTCTACCTTGGCCTaGAGCCTCTCCCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQRSTLA*SLSQPW
Trigger: CCAAGGCTGGGAGAGGCTGCAGGCCAAGGTAGACCG...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAATACCTCGGTCTACCTTaGCCTGCAGCCTCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQYLGLP*PAASPS
Trigger: GCTGGGAGAGGCTGCAGGCCAAGGTAGACCGAGGTA...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCAGCTCTGGCTGGCATaGGAGGCTTCTAAGCCCACT +
Preference number: 2 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHQLWLA*EASKPT
Trigger: AGTGGGCTTAGAAGCCTCCCATGCCAGCCAGAGCTG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp CAGATGAGGACAAAAGTGGACAGTATGGCCATGGTGGGACCCACCGTCACCAGATGCATGGACACCCTATaGATATGGCAGGACCAGGGA +
Preference number: 2 (lower is better)
Translates to: QMRTKVDSMAMVGPTVTRCMDTL*IWQDQG
Trigger: TCCCTGGTCCTGCCATATTCATAGGGTGTCCATGCA...TCTGGTGACGGTGGGTCCCACCATGGCCATACTGTCCACTTTTGTCCTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGCCTTCAACAGACAGCTaGGCACAGCAGGGTAATCCC +
Preference number: 2 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQPSTDS*AQQGNP
Trigger: GGGATTACCCTGCTGTGCCCAGCTGTCTGTTGAAGG...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCTCATCCACGCTGTCATaGGGGGTGGCACGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLSSTLS*GVARGE
Trigger: TTCTCCTCGTGCCACCCCCCATGACAGCGTGGATGA...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGACCCGGGCTCCTAACTaGATCACAGCATCCATATGG +
Preference number: 2 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQTRAPN*ITASIW
Trigger: CCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGT...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTCATGGTGGAAGCTCTaGAGAGCCTGGAGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAASWWKL*RAWRVS
Trigger: GGACACCCTCCAGGCTCTTCAGAGCTTCCACCATGA...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCAATTCCTGCCACCCGTaGACCCCTAGACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLNSCHP*TPRQHH
Trigger: ATGGTGCTGTCTAGGGGTCCACGGGTGGCAGGAATT...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACGTGTGTCATTGGTGGTaGCAGAACCAGGATGCAGCT +
Preference number: 2 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHVCHWW*QNQDAA
Trigger: AGCTGCATCCTGGTTCTGCCACCACCAATGACACAC...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCAGATTCAACAGCTCTaGCTGGCATGGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHQIQQL*LAWEAS
Trigger: AGAAGCCTCCCATGCCAGCCAGAGCTGTTGAATCTG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGTTTGGGGCACACAGCTaGTGTTCCTTCTACCTCCCA +
Preference number: 2 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQFGAHS*CSFYLP
Trigger: TGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAA...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp GAGATTCAAACCCGGGCTCCTAACTGGATCACAGCATCCATATGGTTCATGGTGGGGAGACAGGCAGTTTaGTTCTCCCTGACTGCCAGT +
Preference number: 2 (lower is better)
Translates to: EIQTRAPNWITASIWFMVGRQAV*FSLTAS
Trigger: ACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCC...CACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGGTGGCAGAACCAGGATaGAGCTTTGCTGATGTTTCA +
Preference number: 2 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQVAEPG*SFADVS
Trigger: TGAAACATCAGCAAAGCTGCATCCTGGTTCTGCCAC...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp ACAATTTACACAAGTGCCCAGCCAGAGACGGCATTGTTCAGTTTCTCCTGGGGTCACCTATTACACAGGTaGGGAGACTGGGTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: TIYTSAQPETALFSFSWGHLLHR*GDWVLE
Trigger: TTCCAGGACCCAGTCTCCTCACCTGTGTAATAGGTG...ACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCCAGCCTCTGAATTCCTaGCACCCGTGGACCCCTAGA +
Preference number: 2 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCQPLNS*HPWTPR
Trigger: TCTAGGGGTCCACGGGTGGCAGGAATTCAGAGGCTG...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGAGAGGGACTGGCATTTaGAGAGTTCCTGCTAGGTAC +
Preference number: 2 (lower is better)
Translates to: QILKAELRFKPGLLTGSQRGTGI*RVPARY
Trigger: GTACCTAGCAGGAACTCTGCAAATGCCAGTCCCTCT...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGTAGGGGACCCATTCTaGCCTTTTCGCTCCGCTTTA +
Preference number: 2 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYVGDPF*PFRSAL
Trigger: TAAAGCGGAGCGAAAAGGCCAGAATGGGTCCCCTAC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAAAAGTGGACAGTATaGCCATGGTGGGACCCACCG +
Preference number: 2 (lower is better)
Translates to: TKLARTGQHFIDVCHWWWQKWTV*PWWDPP
Trigger: CGGTGGGTCCCACCATGGCCATACTGTCCACTTTTG...CCACCACCAATGACACACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp ATATCCACAGTCCTATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCAAGCCTCTCCCAGCCTTaGAGGAGGATTCAGCATCCC +
Preference number: 2 (lower is better)
Translates to: ISTVLFDSQNQASKDWPASLSQP*RRIQHP
Trigger: GGGATGCTGAATCCTCCTCCAAGGCTGGGAGAGGCT...TGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 90 bp AGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGGCCATaGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTCTA +
Preference number: 2 (lower is better)
Translates to: RTLEVIYQMQSGARP*FPSLTSVECSISSL
Trigger: TAGACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTCCTGGAAAGGGAGAGTaGCTCACCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: GRQESALVSLDPRSVSSFPGKGE*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCACTCTCCCTTTCCAGG...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTTTAGATGTCAGGGGCTaGCATGGGCAACAGAACTCA +
Preference number: 2 (lower is better)
Translates to: GARPLFPSLTSVECSISSLDVRG*HGQQNS
Trigger: TGAGTTCTGTTGCCCATGTCAGCCCCTGACATCTAA...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGCACCATTTCCAGTATTaGAGAGTCATGGAAGGTTGG +
Preference number: 2 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQHHFQY*RVMEGW
Trigger: CCAACCTTCCATGACTCTGCAATACTGGAAATGGTG...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp ACAATTTACACAAGTGCCCAGCCAGAGACGGCATTGTTCAGTTTCTCCTGGGGTAATGAGCATGTGCCATaGTCTTCCTCTACCTCGGTC +
Preference number: 2 (lower is better)
Translates to: TIYTSAQPETALFSFSWGNEHVP*SSSTSV
Trigger: GACCGAGGTAGAGGAAGAGCATGGCACATGCTCATT...ACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCACAGTATGGCCATGGTaGGACCCACCGTCACCAGAA +
Preference number: 2 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCTVWPW*DPPSPE
Trigger: TTCTGGTGACGGTGGGTCCCACCATGGCCATACTGT...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCGACACCATGTGTGCATaGACACCCTATGAATATGGC +
Preference number: 2 (lower is better)
Translates to: LGTRYYTESCISMRPSPFDTMCA*TPYEYG
Trigger: GCCATATTCATAGGGTGTCCATGCACACATGGTGTC...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTATCACAGCATCCATATaGTTCATGGTGGAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAAITASI*FMVEAL
Trigger: CAGAGCTTCCACCATGAACCATATGGATGCTGTGAT...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTATTGATGTGTGTCATTaGTGGTGGCAGAACCAGGAT +
Preference number: 2 (lower is better)
Translates to: GARPLFPSLTSVECSISSIDVCH*WWQNQD
Trigger: ATCCTGGTTCTGCCACCACCAATGACACACATCAAT...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 90 bp TTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTaGCTGATGTTTCAGCTGATGTCTTTTCCACCAGCAAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: FIDVCHWWWQNQDAA*LMFQLMSFPPARLS
Trigger: AGAGAGCCTTGCTGGTGGAAAAGACATCAGCTGAAACATCAGCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 90 bp AGGGTCTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTaGCTCACTCACAACATTCAGCAAGGCTCTTTTCTTTTTAGAAAG +
Preference number: 2 (lower is better)
Translates to: RVSLSSSLALKDWDA*LTHNIQQGSFLFRK
Trigger: CTTTCTAAAAAGAAAAGAGCCTTGCTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAGACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAAAGAGTCATGGAAGGTTaGAGTTTAGAGATCATCTCA +
Preference number: 2 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQRVMEG*SLEIIS
Trigger: TGAGATGATCTCTAAACTCCAACCTTCCATGACTCT...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCGATGTGTGTCATTGGTaGTGGCAGAACCAGGATGCA +
Preference number: 2 (lower is better)
Translates to: YCHSQSQDGINNLHKCPADVCHW*WQNQDA
Trigger: TGCATCCTGGTTCTGCCACCACCAATGACACACATC...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCCAGTTTGATTCTCCCTaGCTGCCAGTGTCTGAGATT +
Preference number: 2 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAQFDSP*LPVSEI
Trigger: AATCTCAGACACTGGCAGTCAGGGAGAATCAAACTG...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCTACCAGGTACTATACTaGATCCTGCATCTCCATGAG +
Preference number: 2 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCYQVLY*ILHLHE
Trigger: CTCATGGAGATGCAGGATTCAGTATAGTACCTGGTA...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR GCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGGGGGTGAGATCAAGATaGAAACCCAGGTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVGVRSR*KPRSLG
Trigger: CCCCAAAGACCTGGGTTTGCATCTTGATCTCACCCC...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR TCA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGAATCCTGCATCTCCATaGGACCATCTCCCTTCAACA +
Preference number: 2 (lower is better)
Translates to: YLILRTKLARTGQHFIDVNPASP*DHLPST
Trigger: TGTTGAAGGGAGATGGTCTCATGGAGATGCAGGATT...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 90 bp TGTTTCTCTGTAACACCATTTCCAGTATTGCAGAGTCATGGAAGGTaGGAGTTTAGAGATCATCTCACCTATTACACAGGTGAGGAGACT +
Preference number: 2 (lower is better)
Translates to: CFSVTPFPVLQSHGR*EFRDHLTYYTGEET
Trigger: AGTCTCCTCACCTGTGTAATAGGTGAGATGATCTCTAAACTCCAACCTTCCATGACTCTGCAATACTGGAAATGGTGTTACAGAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 72 bp TGCCATGCTCTTCCTCTACCTCGGTCTACCTTGGCCTaGAGCCTCTCCCAGCCTTGGAGGAGGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: CHALPLPRSTLA*SLSQPWRRIQH
Trigger: ATGCTGAATCCTCCTCCAAGGCTGGGAGAGGCTGCAGGCCAAGGTAGACCGAGGTAGAGGAAGAGCATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp ATGAGATCCACCATTTCCTTCAGGAGCTTCCTGGAATaGGTTCCCGAGGCCCTCAGCCAGTGTGCAGTCGCT +
Preference number: 3 (lower is better)
Translates to: MRSTISFRSFLE*VPEALSQCAVA
Trigger: AGCGACTGCACACTGGCTGAGGGCCTCGGGAACCCATTCCAGGAAGCTCCTGAAGGAAATGGTGGATCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp CCCAGACTGTCCAGGCGAGCCTCCTACAGGTCCTGCAGAACTTTCACTCATAGATGCCAGTGTCTGAGATaGGGAGCTTATGAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: PRLSRRASYRSCRTFTHRCQCLR*GAYEAA
Trigger: GGCTGCCTCATAAGCTCCCAATCTCAGACACTGGCA...TCTATGAGTGAAAGTTCTGCAGGACCTGTAGGAGGCTCGCCTGGACAGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 72 bp AGGACCAGGGAGACAGGCAGTTTGATTCTCCCTGACTaGCAGTGTCTGAGATTGGGAGCTTATGAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: RTRETGSLILPD*QCLRLGAYEAA
Trigger: GGCTGCCTCATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp GGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTaGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGT +
Preference number: 3 (lower is better)
Translates to: GQDPGGHLPDAI*SQAIVPLSNIC
Trigger: ACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAAAGGGAGACAGGCAGTTaGATTCTCCCTGACTGCCAG +
Preference number: 3 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQRETGS*ILPDCQ
Trigger: CTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCT...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp AGGGTCTCACTCTCCAGTTCTCTAGCACTGAAGGACTaGGACGCTTTGCTCACTCACAACATTCAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: RVSLSSSLALKD*DALLTHNIQQG
Trigger: GCCTTGCTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp CCCAGACTGTCCAGGCGAGCCTCCTACAGGTCCTGCAGAACTTTCACTCATAGACAATTGGAATCAGAATaGGGTTGGGGAAGCTATGCC +
Preference number: 3 (lower is better)
Translates to: PRLSRRASYRSCRTFTHRQLESE*GWGSYA
Trigger: GGCATAGCTTCCCCAACCCAATTCTGATTCCAATTG...TCTATGAGTGAAAGTTCTGCAGGACCTGTAGGAGGCTCGCCTGGACAGTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp GAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTaGATCACAGCATCCATATGGTTCATGGTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: EGRAEIQTRAPN*ITASIWFMVEA
Trigger: AGCTTCCACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp CATTGTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATaGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: HCSVSPGVSRQK*DSPQRAQSLLL
Trigger: AAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTaGTGTTCCTTCTACCTCCCAGTCATCATGAAGAAC +
Preference number: 3 (lower is better)
Translates to: IKMQTQVFGAHS*CSFYLPVIMKN
Trigger: GTTCTTCATGATGACTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 72 bp GAGTTCCTGCTAGGTACCAGGTACTATACTGAATCCTaGATCTCCATGAGACCATCTCCCTTCAACAGACAG +
Preference number: 3 (lower is better)
Translates to: EFLLGTRYYTES*ISMRPSPFNRQ
Trigger: CTGTCTGTTGAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAGCAGGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCAAGGACTGGGACGCTTaGCTCACTCACAACATTCAG +
Preference number: 3 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAKDWDA*LTHNIQ
Trigger: CTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTT...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp GCAAGGCTCTCTCTTCAATTGGAATCAGAATTGGGTTaGGGAAGCTATGCCATGATAAAAGTCCCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: ARLSLQLESELG*GSYAMIKVPWR
Trigger: TCTCCAGGGGACTTTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCAACCAGGATGCAGCTTaGCTGATGTTTCAGCTGATG +
Preference number: 3 (lower is better)
Translates to: YCHSQSQDGINNLHKCPANQDAA*LMFQLM
Trigger: CATCAGCTGAAACATCAGCAAAGCTGCATCCTGGTT...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR TCA 72 bp ATTTGCAGAGTTCCTGCTAGGTACCAGGTACTATACTaGATCCTGCATCTCCATGAGACCATCTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: ICRVPARYQVLY*ILHLHETISLQ
Trigger: TTGAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAGCAGGAACTCTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR GCA 72 bp GCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTaGTCTATCTCTAGTCTACAATCTTACAAATCCCTC +
Preference number: 3 (lower is better)
Translates to: ARPLFPSLTSVE*SISSLQSYKSL
Trigger: GAGGGATTTGTAAGATTGTAGACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCCTGGCCAGCATTTTATaGATGTGTGTCATTGGTGGT +
Preference number: 3 (lower is better)
Translates to: YCHSQSQDGINNLHKCPALASIL*MCVIGG
Trigger: ACCACCAATGACACACATCAATAAAATGCTGGCCAG...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR TCA 72 bp CAGTATGGCCATGGTGGGACCCACCGTCACCAGAATTaGGTCAAAGAGTATATCAATGCCATTGTCATAAAA +
Preference number: 3 (lower is better)
Translates to: QYGHGGTHRHQN*VKEYINAIVIK
Trigger: TTTTATGACAATGGCATTGATATACTCTTTGACTCAATTCTGGTGACGGTGGGTCCCACCATGGCCATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR-3UTR CAA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGGGAATCAGAATTGGGTaGGGGAAGCTATGCCATGAT +
Preference number: 3 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVGIRIG*GKLCHD
Trigger: ATCATGGCATAGCTTCCCCAACCCAATTCTGATTCC...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CCA 72 bp ACATACAAAACACAGACACATTATCTGGGAAAGTACTaGCCTGTGCCAAACAACATAACGATTCTGAGAAAT +
Preference number: 3 (lower is better)
Translates to: TYKTQTHYLGKY*PVPNNITILRN
Trigger: ATTTCTCAGAATCGTTATGTTGTTTGGCACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTGGGTGCCCCGAGGGGTaGGGTTGGCATCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPGCPEG*GWHPTE
Trigger: CTCTGTGGGATGCCAACCCCACCCCTCGGGGCACCC...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTCCCGTAGTCAACCGATaGACCCCTCCTGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPPVVNR*TPPVLL
Trigger: GAGGAGGACAGGAGGGGTTCATCGGTTGACTACGGG...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTGGTGCCTTCCCCATCTaGCAGCTCCAAGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPGAFPI*QLQVPW
Trigger: CCAAGGGACTTGGAGCTGGCAGATGGGGAAGGCACC...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGCGGCGCATCCTGGGCTaGGGACCCCCACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQRRILG*GPPQQA
Trigger: TGCCTGCTGTGGGGGTCCCCAGCCCAGGATGCGCCG...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTCCTCTCTGTCCCGTCTaGCCCTCATGTCCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPPLCPV*PSCPAC
Trigger: ACAAGCAGGACATGAGGGGCAGACGGGACAGAGAGG...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CAGATGAGGACAAAAGTGGACAGTATGGCCATGGTGGGACCCACCGTCACCAGACCCGAGGGGTGGGGTTaGCATCCCACAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QMRTKVDSMAMVGPTVTRPEGWG*HPTEAQ
Trigger: CTGGGCCTCTGTGGGATGCCAACCCCACCCCTCGGG...TCTGGTGACGGTGGGTCCCACCATGGCCATACTGTCCACTTTTGTCCTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCCACAGCAGGCAAGGTaGCGCAGGGGCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHPQQAR*RRGRGN
Trigger: GTTACCGCGGCCCCTGCGTCACCTTGCCTGCTGTGG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGCAGGACCAGGGAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGAGGAGGGAAAGAAGGCTaGGGAGGGGCTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: GRTRETGSLILPDCQCLRGGKEG*GGATTL
Trigger: GAGGGTGGTAGCCCCTCCCCAGCCTTCTTTCCCTCC...TCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCTGGTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTCCTTCAACAGACAGCTaGGCACAGCAGGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPPSTDS*AQQGNP
Trigger: GGGATTACCCTGCTGTGCCCAGCTGTCTGTTGAAGG...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACGCCAGGGAGCAGCGATaGGCAGGTAGGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHAREQR*AGRWTG
Trigger: GCCAGTCCACCTACCTGCTCATCGCTGCTCCCTGGC...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGCCCTTCAGCCTGCTTaGAGGCGCGGTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYALQPA*RRGPGQ
Trigger: CTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTAGGAGAAAATGTGACTaGGATCGACCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPRRKCD*DRPRRG
Trigger: CCCTCTCCTGGGTCGATCCCAGTCACATTTTCTCCT...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCGCTGCTGACCCGAGATaGCAGCCCCCGAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLAADPR*QPPSGG
Trigger: GCCACCACTCGGGGGCTGCCATCTCGGGTCAGCAGC...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTCCAGGGTGGTCCAGGTaGGGTAGGCCCGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFPGWSR*GRPVAP
Trigger: GGGGGCCACGGGCCTACCTCACCTGGACCACCCTGG...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTGGAAGCCCTTCAGCCTaGTTGGAGGCGCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAAGSPSA*LEARSG
Trigger: CCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCC...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTGCATGCGGGAGCGCTTaGGGCCCAGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFACGSA*GPAGPG
Trigger: CCCTGGGCCAGCTGGGCCGCAAGCGCTCCCGCATGC...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCGCACGAACAGGTGCATaGGGGAGCGCTTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLARTGA*GSACGP
Trigger: TGGGCCGCAAGCGCTCCCGCATGCACCTGTTCGTGC...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCTCATCCACGCTGTCATaGGGGGTGGCACGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPSSTLS*GVARGE
Trigger: TTCTCCTCGTGCCACCCCCCATGACAGCGTGGATGA...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CCCAGACTGTCCAGGCGAGCCTCCTACAGGTCCTGCAGAACTTTCACTCATAGACCTTCAGGAGCTTCCTaGAATGGGTTCCCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRLSRRASYRSCRTFTHRPSGAS*NGFPRP
Trigger: GGGCCTCGGGAACCCATTCCAGGAAGCTCCTGAAGG...TCTATGAGTGAAAGTTCTGCAGGACCTGTAGGAGGCTCGCCTGGACAGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGGCCCTCAGCCAGTGTaGAGTCGCTCCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYGPQPV*SRSPLS
Trigger: GGACAGTGGGGAGCGACTGCACACTGGCTGAGGGCC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGAGCACCCCTGAGCCCTaGATCACCTCCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQSTPEP*ITSRRE
Trigger: TTCCCTGCGGGAGGTGATCCAGGGCTCAGGGGTGCT...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTGGTGAGGTAGGCCCGTaGCCCCCAAGGGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: GARPLFPSLTSVECSISSGEVGP*PPREAE
Trigger: TTCGGCTTCCCTTGGGGGCCACGGGCCTACCTCACC...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCGTCAGCAGCGTGGTGTaGCGGCTCGAGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFVSSVV*RLERLP
Trigger: CGGCAGCCTCTCGAGCCGCCACACCACGCTGCTGAC...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp ACAATTTACACAAGTGCCCAGCCAGAGACGGCATTGTTCAGTTTCTCCTGGGGTGCACCTGCAGGTACTTaGCGGCCCTGCACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TIYTSAQPETALFSFSWGAPAGT*RPCTGG
Trigger: ACCTCCTGTGCAGGGCCGTCAAGTACCTGCAGGTGC...ACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTGGCTGTAGCAGGCCGTaGGCATGGTCACCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GARPLFPSLTSVECSISSGCSRP*AWSPAE
Trigger: TTCTGCCGGTGACCATGCTCACGGCCTGCTACAGCC...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCGTAACAGGTGGCTGTTaGAGCCCATGTAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPVTGGC*SPCRSR
Trigger: CCTGGATCTACATGGGCTTCAACAGCCACCTGTTAC...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGCAGGACCAGGGAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATGCATGGACACCCTATaGATATGGCAGGACCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRTRETGSLILPDCQCLRCMDTL*IWQDQG
Trigger: TCCCTGGTCCTGCCATATTCATAGGGTGTCCATGCA...TCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCTGGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CCCAGACTGTCCAGGCGAGCCTCCTACAGGTCCTGCAGAACTTTCACTCATAGAGAGGGGTCAGGAAGATaGGGAATCAGGACGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRLSRRASYRSCRTFTHREGSGR*GIRTGR
Trigger: TCTTCCCGTCCTGATTCCCCATCTTCCTGACCCCTC...TCTATGAGTGAAAGTTCTGCAGGACCTGTAGGAGGCTCGCCTGGACAGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTAGCGGGTCAGCAGCGTaGTGTGGCGGCTCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFSGSAA*CGGSRG
Trigger: GCCTCTCGAGCCGCCACACCACGCTGCTGACCCGCT...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAAGGGTGGCCGGGCAGCTaGAGCGGGTCAGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKGWPGS*SGSAAW
Trigger: CCACGCTGCTGACCCGCTCCAGCTGCCCGGCCACCC...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCGTAGGGGACCCATTCTaGCCTTTTCGCTCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPVGDPF*PFRSAL
Trigger: TAAAGCGGAGCGAAAAGGCCAGAATGGGTCCCCTAC...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGACAGTATGGCCATGGTaGGACCCACCGTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQTVWPW*DPPSPE
Trigger: TTCTGGTGACGGTGGGTCCCACCATGGCCATACTGT...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGTACCTCGGTCTACCTTaGCCTGCAGCCTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQYLGLP*PAASPS
Trigger: GCTGGGAGAGGCTGCAGGCCAAGGTAGACCGAGGTA...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp GGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATaGGGAGCTTATGAGGCAGCCCTCACACTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSLILPDCQCLR*GAYEAALTLGA
Trigger: TGCCCCTAGTGTGAGGGCTGCCTCATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp CAGATGAGGACAAAAGTGGACAGTATGGCCATGGTGGGACCCACCGTCACCAGACACCTATTACACAGGTaGGGAGACTGGGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QMRTKVDSMAMVGPTVTRHLLHR*GDWVLE
Trigger: TTCCAGGACCCAGTCTCCTCACCTGTGTAATAGGTG...TCTGGTGACGGTGGGTCCCACCATGGCCATACTGTCCACTTTTGTCCTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGTGCTTTAGTCAGCCTTaGTCCCAGGTCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQCFSQP*SQVCLL
Trigger: GAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCA...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGCAGGACCAGGGAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATGCTACAGCCTGGGCTaGATCTATAGCCCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: GRTRETGSLILPDCQCLRCYSLG*IYSPVV
Trigger: TACTACAGGGCTATAGATTCAGCCCAGGCTGTAGCA...TCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCTGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCGCAGCACAGCCAGGTTaGCCCCGGTCGCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAAAQPG*PRSPAP
Trigger: TGGTGCTGGCGACCGGGGGCAACCTGGCTGTGCTGC...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCTGCAGCACGAACAGGTaGATGCGGGAGCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFCSTNR*MRERLR
Trigger: CCGCAAGCGCTCCCGCATGCACCTGTTCGTGCTGCA...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAAGTGGGTCCTCCCATCTaGCTGAGCCTTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQVGPPI*LSLGPI
Trigger: AATGGGACCAAGGCTCAGGCAGATGGGAGGACCCAC...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGCAGGACCAGGGAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGAATGAGCAAGGTTTGCTaGGAGGGAAGGATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRTRETGSLILPDCQCLRMSKVC*EGRMKG
Trigger: TCCCTTCATCCTTCCCTCCCAGCAAACCTTGCTCAT...TCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCTGGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTATGGCAGCCCCCGAGTaGTGGCAGCTAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAAMAAPE*WQLRWK
Trigger: CTTCCACCTTAGCTGCCACCACTCGGGGGCTGCCAT...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCACACGGACCACATCTaGACACTGAAGAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHHTDHI*TLKKGA
Trigger: GGCTCCCTTCTTCAGTGTCCAGATGTGGTCCGTGTG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGAATTCCTGCCACCCGTaGACCCCTAGACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQNSCHP*TPRQHH
Trigger: ATGGTGCTGTCTAGGGGTCCACGGGTGGCAGGAATT...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CAGATGAGGACAAAAGTGGACAGTATGGCCATGGTGGGACCCACCGTCACCAGACTACCAGATGCAATCTaGAGCCAGGCCATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QMRTKVDSMAMVGPTVTRLPDAI*SQAIVP
Trigger: GGGAACAATGGCCTGGCTCCAGATTGCATCTGGTAG...TCTGGTGACGGTGGGTCCCACCATGGCCATACTGTCCACTTTTGTCCTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCGGAAGGAGAAAATGTaGCTGGGATCGACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLRKEKM*LGSTQE
Trigger: CTCCTGGGTCGATCCCAGTCACATTTTCTCCTTCCG...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTGAGGCCCAGAATCCATaGGCAAGGTTTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GARPLFPSLTSVECSISSEAQNP*ARFAGR
Trigger: CCTCCCAGCAAACCTTGCTCATGGATTCTGGGCCTC...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGGGGAGACAGGCAGTTTaGTTCTCCCTGACTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQGRQAV*FSLTAS
Trigger: ACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCC...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp ACAATTTACACAAGTGCCCAGCCAGAGACGGCATTGTTCAGTTTCTCCTGGGGTTCATGGTGGAAGCTCTaGAGAGCCTGGAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TIYTSAQPETALFSFSWGSWWKL*RAWRVS
Trigger: GGACACCCTCCAGGCTCTTCAGAGCTTCCACCATGA...ACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp ATCAAGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCTGGAAAGGGAGAGTaGCTCACCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: IKMQTQVFGAHSWCSFYLPGKGE*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCACTCTCCCTTTCCAGG...GAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAACAAGCCCGCTCGCTCTaGCTGGTGAGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKQARSL*LVSSGW
Trigger: CCAGCCGCTGCTCACCAGGCAGAGCGAGCGGGCTTG...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTGAATGGGGGACGCTGTaGAGAGTGAGGCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAAEWGTL*RVRLLG
Trigger: TCCCAGAAGCCTCACTCTGCACAGCGTCCCCCATTC...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCCGGTCTACCTTGGCCTaGAGCCTCTCCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCRSTLA*SLSQPW
Trigger: CCAAGGCTGGGAGAGGCTGCAGGCCAAGGTAGACCG...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACGGGGTGAGATCAAGATaGAAACCCAGGTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHGVRSR*KPRSLG
Trigger: CCCCAAAGACCTGGGTTTGCATCTTGATCTCACCCC...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCGCCTCCTACAGGTCCTaGAGAACTTTCACTCATAGA +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPASYRS*RTFTHR
Trigger: TCTATGAGTGAAAGTTCTGCAGGACCTGTAGGAGGC...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCTTCTCCAAACTTTTCTaGAAGCCAAGAGCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPFSKLF*KPRAEA
Trigger: GGCTTCCGCTCTTGGCTTCCAGAAAAGTTTGGAGAA...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCCAGCACCAGGACAGTaGCCAGGACTCCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TKLARTGQHFIDVCHWWWPAPGQ*PGLRSP
Trigger: TGGAGATCGGAGTCCTGGCCACTGTCCTGGTGCTGG...CCACCACCAATGACACACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCGCAGCCCCCGAGTGGTaGCAGCTAAGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCAAPEW*QLRWKV
Trigger: CACCTTCCACCTTAGCTGCCACCACTCGGGGGCTGC...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCGACACCATGTGTGCATaGACACCCTATGAATATGGC +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPDTMCA*TPYEYG
Trigger: GCCATATTCATAGGGTGTCCATGCACACATGGTGTC...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGACCCGGGCTCCTAACTaGATCACAGCATCCATATGG +
Preference number: 4 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQTRAPN*ITASIW
Trigger: CCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGT...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGTTTGGGTCAGGACCCTaGAGGTCATCTACCAGATGC +
Preference number: 4 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQFGSGP*RSSTRC
Trigger: GCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAA...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATTCGGATCTTGGCCCGTaGGATGGTGTTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYSDLGP*DGVDAA
Trigger: AGCAGCATCAACACCATCTCACGGGCCAAGATCCGA...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCGGCAACAGAACTCAGTaGGAGGGAGACTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFGNRTQ*EGDCGS
Trigger: GGACCCACAGTCTCCCTCTCACTGAGTTCTGTTGCC...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTAACATGCTGAGCACCTaGAGGTACTTGACGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAANMLST*RYLTAL
Trigger: CAGGGCCGTCAAGTACCTGCAGGTGCTCAGCATGTT...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCAGGGAAGCCGAAGTCTaGCCAGCAGTCCAGCACCCC +
Preference number: 4 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAREAEV*PAVQHP
Trigger: GGGGTGCTGGACTGCTGGGCAGACTTCGGCTTCCCT...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ATATCCACAGTCCTATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATGGTGGCAGCTAAGGTaGAAGGTGAGGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ISTVLFDSQNQASKDWPAWWQLR*KVRACP
Trigger: GGGACAGGCCCTCACCTTCCACCTTAGCTGCCACCA...TGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGCCAGTCAGGTTAGAATaGAGACAGGTAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQPVRLE*RQVARA
Trigger: TGCCCTGGCTACCTGTCTCCATTCTAACCTGACTGG...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAATTCAACAGCTCTGGCTaGCATGGGAGGCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQFNSSG*HGRLLS
Trigger: GCTTAGAAGCCTCCCATGCCAGCCAGAGCTGTTGAA...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGAACTGTAGACTCTTTTaGGTCAGGACCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQNCRLF*VRTLEV
Trigger: GACCTCCAGGGTCCTGACCCAAAAGAGTCTACAGTT...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGCAGGTAGAAAAGGGGTaGGATCAAGATGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQQVEKG*DQDANP
Trigger: TGGGTTTGCATCTTGATCTCACCCCTTTTCTACCTG...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCTCAGGACGGGAAGAATaGGGGACGCTGTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCSGREE*GTLCRV
Trigger: CACTCTGCACAGCGTCCCCCATTCTTCCCGTCCTGA...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGGGGTGTGGATGCAAGTaGAGAGGTTTGATGGATAAA +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQGCGCK*RGLMDK
Trigger: TTTATCCATCAAACCTCTCCACTTGCATCCACACCC...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GAGATTCAAACCCGGGCTCCTAACTGGATCACAGCATCCATATGGTTCATGGTGGAGGAGAAGAGGGACTaGCATTTGCAGAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EIQTRAPNWITASIWFMVEEKRD*HLQSSC
Trigger: GCAGGAACTCTGCAAATGCCAGTCCCTCTTCTCCTC...CACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCAGGAGCTTCCTGGAATaGGTTCCCGAGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YCHSQSQDGINNLHKCPARSFLE*VPEALS
Trigger: GCTGAGGGCCTCGGGAACCCATTCCAGGAAGCTCCT...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCACAGACACATTATCTaGGAAAGTACTGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHHRHII*ESTGLC
Trigger: GCACAGGCCAGTACTTTCCCAGATAATGTGTCTGTG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp GGGGAAAGGAGGGAGGGCCACAAGTCCCTGCTGCCCTaGAGGCTTATTCTTGCTGTTAATTTTATGATGACC +
Preference number: 4 (lower is better)
Translates to: GERREGHKSLLP*RLILAVNFMMT
Trigger: GGTCATCATAAAATTAACAGCAAGAATAAGCCTCAAGGGCAGCAGGGACTTGTGGCCCTCCCTCCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGGTCTTTCCTAAAAGATaGTGGTCTCAGCGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQVFPKR*WSQRCL
Trigger: AAGGCACCGCTGAGACCATCATCTTTTAGGAAAGAC...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGTCAGGGGTAGAGACTaGAAGTGTTCCCTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYVRGRD*KCSLEL
Trigger: AAGCTCTAGGGAACACTTTCAGTCTCTACCCCTGAC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCTGCCCCTCATGTCCTaGTTGTACATAGGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHLPLMS*LYIGFK
Trigger: CTTAAAACCTATGTACAAGCAGGACATGAGGGGCAG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGCCAGCCAGGGTGTTGTaGCATTGGGGGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YLILRTKLARTGQHFIDVPARVL*HWGQRG
Trigger: CCCTCTCTGCCCCCAATGCCACAACACCCTGGCTGG...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCAGAGTCATGGAAGGTTaGAGTTTAGAGATCATCTCA +
Preference number: 4 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPRVMEG*SLEIIS
Trigger: TGAGATGATCTCTAAACTCCAACCTTCCATGACTCT...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGTTAGCCGTCAGAAATaGGATTCACCCCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYVSRQK*DSPQRA
Trigger: TGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAAC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGTATCTGGGAAAGTACTaGCCTGTGCCAAACAACATA +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQYLGKY*PVPNNI
Trigger: TATGTTGTTTGGCACAGGCCAGTACTTTCCCAGATA...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp GTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTaGCTGATGTTTCAGCTGATGTCTTTTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VCHWWWQNQDAA*LMFQLMSFPPA
Trigger: TGCTGGTGGAAAAGACATCAGCTGAAACATCAGCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGCACCGTCACCAGAATTaGGTCAAAGAGTATATCAAT +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQHRHQN*VKEYIN
Trigger: ATTGATATACTCTTTGACTCAATTCTGGTGACGGTG...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGACCTCCCAGTCATCATaGAGAACAAAGATTTACCAA +
Preference number: 4 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQTSQSS*RTKIYQ
Trigger: TTGGTAAATCTTTGTTCTTCATGATGACTGGGAGGT...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp ACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGAGAGGGACTGGCATTTaGAGAGTTCCTGCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: TKLARTGQHFIDVCHWWWRGTGI*RVPARY
Trigger: GTACCTAGCAGGAACTCTGCAAATGCCAGTCCCTCT...CCACCACCAATGACACACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCAATGAGCATGTGCCATaGTCTTCCTCTACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFNEHVP*SSSTSV
Trigger: GACCGAGGTAGAGGAAGAGCATGGCACATGCTCATT...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCAGGACTGGGACGCTTTaGTCACTCACAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFRTGTL*SLTTFS
Trigger: GCTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCT...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCAGGTCATCTACCAGATaGAATCTGGAGCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFRSSTR*NLEPGH
Trigger: ATGGCCTGGCTCCAGATTGCATCTGGTAGATGACCT...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAAAGCCTCTCCCAGCCTTaGAGGAGGATTCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKSLSQP*RRIQHP
Trigger: GGGATGCTGAATCCTCCTCCAAGGCTGGGAGAGGCT...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp ATATCCACAGTCCTATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCAGTGTGTCATTGGTGGTaGCAGAACCAGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: ISTVLFDSQNQASKDWPAVCHWW*QNQDAA
Trigger: AGCTGCATCCTGGTTCTGCCACCACCAATGACACAC...TGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCGATGTGTGTCATTGGTaGTGGCAGAACCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFDVCHW*WQNQDA
Trigger: TGCATCCTGGTTCTGCCACCACCAATGACACACATC...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp CTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTaGCTCACTCACAACATTCAGCAAGGCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSSLALKDWDA*LTHNIQQGSFL
Trigger: AAGAAAAGAGCCTTGCTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGCTCCAAGTCCCTTGGTaGCTCTTCAGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVLQVPW*LFRPGP
Trigger: AGGCCCAGGCCTGAAGAGTCACCAAGGGACTTGGAG...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTTTAGATGTCAGGGGCTaGCATGGGCAACAGAACTCA +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFLDVRG*HGQQNS
Trigger: TGAGTTCTGTTGCCCATGTCAGCCCCTGACATCTAA...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCTCTGTCAGGGCTAAGTaGAGCACGAACAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: YCHSQSQDGINNLHKCPASVRAK*STNRCM
Trigger: CATGCACCTGTTCGTGCTGCACTTAGCCCTGACAGA...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGAGCCAGGCCATTGTTCCCCTCTCTAACATCTGTTGAGTGCTCTATCTCTAGTCACCATTTCCAGTATTaGAGAGTCATGGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GARPLFPSLTSVECSISSHHFQY*RVMEGW
Trigger: CCAACCTTCCATGACTCTGCAATACTGGAAATGGTG...ACTAGAGATAGAGCACTCAACAGATGTTAGAGAGGGGAACAATGGCCTGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAACAAAAGTGGACAGTATaGCCATGGTGGGACCCACCG +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKQKWTV*PWWDPP
Trigger: CGGTGGGTCCCACCATGGCCATACTGTCCACTTTTG...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCCAGATTCAACAGCTCTaGCTGGCATGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAQIQQL*LAWEAS
Trigger: AGAAGCCTCCCATGCCAGCCAGAGCTGTTGAATCTG...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTCAGTTTGATTCTCCCTaGCTGCCAGTGTCTGAGATT +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFQFDSP*LPVSEI
Trigger: AATCTCAGACACTGGCAGTCAGGGAGAATCAAACTG...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTAATCCTGCATCTCCATaGGACCATCTCCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFNPASP*DHLPST
Trigger: TGTTGAAGGGAGATGGTCTCATGGAGATGCAGGATT...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGCCATGGGAGGAACAATaGGGGCTCCAAAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVPWEEQ*GLQSHH
Trigger: GTGGTGGCTTTGGAGCCCTCATTGTTCCTCCCATGG...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp AGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTTTGCTTCAACCTGGGTTTCTaGCCCAGGAATGAACTGCTA +
Preference number: 4 (lower is better)
Translates to: SILLMCVIGGGRTRMQLCFNLGF*PRNELL
Trigger: TAGCAGTTCATTCCTGGGTCAGAAACCCAGGTTGAA...GCAAAGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTGTGGCAGAACCAGGATaGAGCTTTGCTGATGTTTCA +
Preference number: 4 (lower is better)
Translates to: GRQESALVSLDPRSVSSFVAEPG*SFADVS
Trigger: TGAAACATCAGCAAAGCTGCATCCTGGTTCTGCCAC...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp ACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGAACAATTTACACAAGTaGCCAGCCAGAGACGGCATT +
Preference number: 4 (lower is better)
Translates to: TKLARTGQHFIDVCHWWWNNLHK*PARDGI
Trigger: AATGCCGTCTCTGGCTGGGCACTTGTGTAAATTGTT...CCACCACCAATGACACACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp CTAGGTACCAGGTACTATACTGAATCCTGCATCTCCATGAGACCATCTCCCTTCATCACAGCATCCATATaGTTCATGGTGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGTRYYTESCISMRPSPFITASI*FMVEAL
Trigger: CAGAGCTTCCACCATGAACCATATGGATGCTGTGAT...GAAGGGAGATGGTCTCATGGAGATGCAGGATTCAGTATAGTACCTGGTACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGTGGACAGTATGGCCATaGTGGGACCCACCGTCACCA +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVWTVWP*WDPPSP
Trigger: TGGTGACGGTGGGTCCCACCATGGCCATACTGTCCA...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGAATCAGAATTGGGTTaGGGAAGCTATGCCATGATA +
Preference number: 4 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYESELG*GSYAMI
Trigger: TATCATGGCATAGCTTCCCCAACCCAATTCTGATTC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGCAGCTCTGGCTGGCATaGGAGGCTTCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVQLWLA*EASKPT
Trigger: AGTGGGCTTAGAAGCCTCCCATGCCAGCCAGAGCTG...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAATTTGGGGCACACAGCTaGTGTTCCTTCTACCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKFGAHS*CSFYLP
Trigger: TGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAA...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp CTGATGTCTTTTCCACCAGCAAGGCTCTCTCTTCAATaGGAATCAGAATTGGGTTGGGGAAGCTATGCCATG +
Preference number: 4 (lower is better)
Translates to: LMSFPPARLSLQ*ESELGWGSYAM
Trigger: CATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGCCTTGCTGGTGGAAAAGACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp GAGATTCAAACCCGGGCTCCTAACTGGATCACAGCATCCATATGGTTCATGGTGTACTATACTGAATCCTaGATCTCCATGAGACCATCT +
Preference number: 4 (lower is better)
Translates to: EIQTRAPNWITASIWFMVYYTES*ISMRPS
Trigger: AGATGGTCTCATGGAGATGCAGGATTCAGTATAGTA...CACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR GCA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGCTAACATCTGTTGAGTaGTCTATCTCTAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: QILKAELRFKPGLLTGSQLTSVE*SISSLQ
Trigger: TTGTAGACTAGAGATAGAGCACTCAACAGATGTTAG...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGGAGGAGACTGGGTCCTaGAAAGGGAGAGTGACTCAC +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVEETGS*KGRVTH
Trigger: GTGAGTCACTCTCCCTTTCCAGGACCCAGTCTCCTC...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGGATGAAGGGAGGGTGTaGATGCAAGTGGAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: YLILRTKLARTGQHFIDVDEGRV*MQVERF
Trigger: AAACCTCTCCACTTGCATCCACACCCTCCCTTCATC...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CCA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTCTTCTTAGAGCTGAGTaGCCTCTTAAAGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAALLRAE*PLKEVY
Trigger: ATATACTTCTTTAAGAGGCCACTCAGCTCTAAGAAG...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GCTCTCTCTTCAATTGGAATCAGAATTGGGTTGGGGAAGCTATGCCATGATAAAGCCAGGCCTGTGTCTTaGCTTTTAGGTTTTTACAGA +
Preference number: 4 (lower is better)
Translates to: ALSSIGIRIGLGKLCHDKARPVS*LLGFYR
Trigger: TCTGTAAAAACCTAAAAGTCAAGACACAGGCCTGGC...TTTATCATGGCATAGCTTCCCCAACCCAATTCTGATTCCAATTGAAGAGAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp GTAACACCATTTCCAGTATTGCAGAGTCATGGAAGGTaGGAGTTTAGAGATCATCTCACCTATTACACAGGT +
Preference number: 4 (lower is better)
Translates to: VTPFPVLQSHGR*EFRDHLTYYTG
Trigger: ACCTGTGTAATAGGTGAGATGATCTCTAAACTCCAACCTTCCATGACTCTGCAATACTGGAAATGGTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp CATGAAGCAATTTTCTCTCTAACAACAACAACAACAACAACAAATCCAGGATCCGCAAGTGGAGAGGTTTaGTGGATAAAATGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HEAIFSLTTTTTTTNPGSASGEV*WIKWSG
Trigger: GCCACTCCATTTTATCCATCAAACCTCTCCACTTGC...GGATCCTGGATTTGTTGTTGTTGTTGTTGTTGTTAGAGAGAAAATTGCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR TCA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGTACCAGGTACTATACTaGATCCTGCATCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVYQVLY*ILHLHE
Trigger: CTCATGGAGATGCAGGATTCAGTATAGTACCTGGTA...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
3UTR CAA 72 bp TATCCTTTGTGTTTCTCTGTAACACCATTTCCAGTATaGCAGAGTCATGGAAGGTTGGAGTTTAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: YPLCFSVTPFPV*QSHGRLEFRDH
Trigger: ATGATCTCTAAACTCCAACCTTCCATGACTCTGCAATACTGGAAATGGTGTTACAGAGAAACACAAAGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS GCA 90 bp GGCAGCTGGAGCGGGTCAGCAGCGTGGTGTGGCGGCTCGAGAGGCTaGCGTCGGAGAGCCGCCGGCGCATCCTGGGCTGGGGACCCCCAC +
Preference number: 5 (lower is better)
Translates to: GSWSGSAAWCGGSRG*RRRAAGASWAGDPH
Trigger: GTGGGGGTCCCCAGCCCAGGATGCGCCGGCGGCTCTCCGACGGCAGCCTCTCGAGCCGCCACACCACGCTGCTGACCCGCTCCAGCTGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367126.5
ENST00000612906.1
CDS CCA 90 bp AAGTGCAGCACGAACAGGTGCATGCGGGAGCGCTTGCGGCCCAGCTaGCCCAGGGTCAGCAGCACAGCCAGGTTGCCCCCGGTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: KCSTNRCMRERLRPS*PRVSSTARLPPVAS
Trigger: GCTGGCGACCGGGGGCAACCTGGCTGTGCTGCTGACCCTGGGCCAGCTGGGCCGCAAGCGCTCCCGCATGCACCTGTTCGTGCTGCACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CCA 90 bp CGGTCGCCAGCACCAGGACAGTGGCCAGGACTCCGATCTCCACCTTaGCCAGCTCCTCATCCCGGCCCAGCCAGGGTGTTGTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: RSPAPGQWPGLRSPP*PAPHPGPARVLWHW
Trigger: CCAATGCCACAACACCCTGGCTGGGCCGGGATGAGGAGCTGGCCAAGGTGGAGATCGGAGTCCTGGCCACTGTCCTGGTGCTGGCGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp AGCCCTCACACTAGGGGCAGCTGTGACACCAGGGTAGGGGACCCATTCTGGCCTGGCCCAGCCAGGGTGTaGTGGCATTGGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SPHTRGSCDTRVGDPFWPGPARV*WHWGQR
Trigger: TCTCTGCCCCCAATGCCACAACACCCTGGCTGGGCC...AGGCCAGAATGGGTCCCCTACCCTGGTGTCACAGCTGCCCCTAGTGTGAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CCA 90 bp TCCAAACTTTTCTGGAAGCCAAGAGCGGAAGCCCTTCAGCCTGCTTaGAGGCGCGGTCCGGGGCAGTCGGTGTCGCGCTCAGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SKLFWKPRAEALQPA*RRGPGQSVSRSGQE
Trigger: TTCCTGCCCTGAGCGCGACACCGACTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCCGCTCTTGGCTTCCAGAAAAGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS GCA 90 bp TTTCTCCAAACTTTTCTGGAAGCCAAGAGCGGAAGCCCTTCAGCCTaGTTGGAGGCGCGGTCCGGGGCAGTCGGTGTCGCGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: FLQTFLEAKSGSPSA*LEARSGAVGVALRA
Trigger: TGCCCTGAGCGCGACACCGACTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCCGCTCTTGGCTTCCAGAAAAGTTTGGAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATTGCATGCGGGAGCGCTaGCGGCCCAGCTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYCMRER*RPSWPR
Trigger: CCTGGGCCAGCTGGGCCGCAAGCGCTCCCGCATGCA...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGAGCACCTGCAGGTACTaGACGGCCCTGCACAGGAGG +
Preference number: 5 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQSTCRY*TALHRR
Trigger: CCTCCTGTGCAGGGCCGTCAAGTACCTGCAGGTGCT...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGCTACCTCGGTCTACCTaGGCCTGCAGCCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: QILKAELRFKPGLLTGSQLPRST*ACSLSQ
Trigger: CTGGGAGAGGCTGCAGGCCAAGGTAGACCGAGGTAG...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAAGCCCGTGAGATGGTGTaGATGCTGCTGACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQAREMV*MLLTRD
Trigger: ATCTCGGGTCAGCAGCATCAACACCATCTCACGGGC...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GTTCAGTTTCTCCTGGGGTTAGCCGTCAGAAATGGGATTCACCCCAGAGAGCACCAGCCAGAGACGGCATaGTTCAGTTTCTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: VQFLLGLAVRNGIHPREHQPETA*FSFSWG
Trigger: ACCCCAGGAGAAACTGAACAATGCCGTCTCTGGCTG...GTGCTCTCTGGGGTGAATCCCATTTCTGACGGCTAACCCCAGGAGAAACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp AGATGCAAACCCAGGTCTTTGGGGCACACAGCTGGTGTTCCTTCTACCTCCCAGCGCCAGGCCTGTGTCTaGACTTTTAGGTTTTTACAG +
Preference number: 5 (lower is better)
Translates to: RCKPRSLGHTAGVPSTSQRQACV*TFRFLQ
Trigger: CTGTAAAAACCTAAAAGTCAAGACACAGGCCTGGCG...CTGGGAGGTAGAAGGAACACCAGCTGTGTGCCCCAAAGACCTGGGTTTGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp ATATCCACAGTCCTATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCACCAGCTCCAAGTCCCTaGGTGACTCTTCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ISTVLFDSQNQASKDWPAPAPSP*VTLQAW
Trigger: CCAGGCCTGAAGAGTCACCAAGGGACTTGGAGCTGG...TGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGATTCAAACCCGGGCTCCTAACTGGATCACAGCATCCATATGGTTCATGGTGTGCCAGTGTCTGAGATaGGGAGCTTATGAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EIQTRAPNWITASIWFMVCQCLR*GAYEAA
Trigger: GGCTGCCTCATAAGCTCCCAATCTCAGACACTGGCA...CACCATGAACCATATGGATGCTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATAGGGAGACAGGCAGTTaGATTCTCCCTGACTGCCAG +
Preference number: 5 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYRETGS*ILPDCQ
Trigger: CTGGCAGTCAGGGAGAATCAAACTGCCTGTCTCCCT...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp AAATGGGATTCACCCCAGAGAGCACAGAGCCTCCTTCTTGCTTCCACAGGGCCCAGGCTCTCTCTTCAATaGGAATCAGAATTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: KWDSPQRAQSLLLASTGPRLSLQ*ESELGW
Trigger: CCAACCCAATTCTGATTCCAATTGAAGAGAGAGCCT...GGGCCCTGTGGAAGCAAGAAGGAGGCTCTGTGCTCTCTGGGGTGAATCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp ACTCTTTTGGGTCAGGACCCTGGAGGTCATCTACCAGATGCAATCTGGAGCCAGATGGTGAAAGCCACATaGGTGGAATCTTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: TLLGQDPGGHLPDAIWSQMVKAT*VESSSG
Trigger: CCCTGATGAAGATTCCACCAATGTGGCTTTCACCAT...CTGGCTCCAGATTGCATCTGGTAGATGACCTCCAGGGTCCTGACCCAAAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp CTCACTCTCCAGTTCTCTAGCACTGAAGGACTGGGACGCTTTGCTCACTCACAAAAGGACTGGGACGCTTaGCTCACTCACAACATTCAG +
Preference number: 5 (lower is better)
Translates to: LTLQFSSTEGLGRFAHSQKDWDA*LTHNIQ
Trigger: CTGAATGTTGTGAGTGAGCAAAGCGTCCCAGTCCTT...TTGTGAGTGAGCAAAGCGTCCCAGTCCTTCAGTGCTAGAGAACTGGAGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATGAGAAAGGAGAAGCGTaGAGAATGACAGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYEKGEA*RMTGRR
Trigger: CCTTCTCCCTGTCATTCTCAACGCTTCTCCTTTCTC...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATATCCATGAGCAAGGTTaGCTGGGAGGGAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYIHEQG*LGGKDE
Trigger: TTCATCCTTCCCTCCCAGCAAACCTTGCTCATGGAT...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGACTCCGATCTCCACCTaGGCCAGCTCCTCATCCCGG +
Preference number: 5 (lower is better)
Translates to: YLILRTKLARTGQHFIDVTPIST*ASSSSR
Trigger: CCGGGATGAGGAGCTGGCCAAGGTGGAGATCGGAGT...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp ATATCCACAGTCCTATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATCATCAGGGGCATTCTaGTCCCACACGGACCACATC +
Preference number: 5 (lower is better)
Translates to: ISTVLFDSQNQASKDWPASSGAF*SHTDHI
Trigger: GATGTGGTCCGTGTGGGACAAGAATGCCCCTGATGA...TGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GAGACAGGCAGTTTGATTCTCCCTGACTGCCAGTGTCTGAGATTGGGAGCTTATCAGCAGCTGTTGAGGTaGCCCAAAAGCATAGAGATG +
Preference number: 5 (lower is better)
Translates to: ETGSLILPDCQCLRLGAYQQLLR*PKSIEM
Trigger: CATCTCTATGCTTTTGGGCAACCTCAACAGCTGCTG...ATAAGCTCCCAATCTCAGACACTGGCAGTCAGGGAGAATCAAACTGCCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp ACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGTCTGGAGCCAGGCCATaGTTCCCCTCTCTAACATCT +
Preference number: 5 (lower is better)
Translates to: TKLARTGQHFIDVCHWWWSGARP*FPSLTS
Trigger: AGATGTTAGAGAGGGGAACAATGGCCTGGCTCCAGA...CCACCACCAATGACACACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTCAATTGGAATCAGAATaGGGTTGGGGAAGCTATGCC +
Preference number: 5 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAAQLESE*GWGSYA
Trigger: GGCATAGCTTCCCCAACCCAATTCTGATTCCAATTG...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GGCCAGCATTTTATTGATGTGTGTCATTGGTGGTGGCAGAACCAGGATGCAGCTAACCAGGATGCAGCTTaGCTGATGTTTCAGCTGATG +
Preference number: 5 (lower is better)
Translates to: GQHFIDVCHWWWQNQDAANQDAA*LMFQLM
Trigger: CATCAGCTGAAACATCAGCAAAGCTGCATCCTGGTT...AGCTGCATCCTGGTTCTGCCACCACCAATGACACACATCAATAAAATGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp CAGATACTGAAGGCAGAGCTGAGATTCAAACCCGGGCTCCTAACTGGATCACAGCTGGCCAGCATTTTATaGATGTGTGTCATTGGTGGT +
Preference number: 5 (lower is better)
Translates to: QILKAELRFKPGLLTGSQLASIL*MCVIGG
Trigger: ACCACCAATGACACACATCAATAAAATGCTGGCCAG...CTGTGATCCAGTTAGGAGCCCGGGTTTGAATCTCAGCTCTGCCTTCAGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGTTCACTGTTCGGATCTaGGCCCGTGAGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: YLILRTKLARTGQHFIDVFTVRI*AREMVL
Trigger: CAACACCATCTCACGGGCCAAGATCCGAACAGTGAA...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp TACTGTCATTCACAGTCACAGGATGGCATAAACAATTTACACAAGTGCCCAGCCGGAATCAGAATTGGGTaGGGGAAGCTATGCCATGAT +
Preference number: 5 (lower is better)
Translates to: YCHSQSQDGINNLHKCPAGIRIG*GKLCHD
Trigger: ATCATGGCATAGCTTCCCCAACCCAATTCTGATTCC...GGCTGGGCACTTGTGTAAATTGTTTATGCCATCCTGTGACTGTGAATGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp TATTTGATTCTCAGAACCAAGCTAGCAAGGACTGGCCAGCATTTTATTGATGTGAAGTCCCTGCTGCCCTaGAGGCTTATTCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: YLILRTKLARTGQHFIDVKSLLP*RLILAV
Trigger: AACAGCAAGAATAAGCCTCAAGGGCAGCAGGGACTT...CACATCAATAAAATGCTGGCCAGTCCTTGCTAGCTTGGTTCTGAGAATCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GGTAGACAAGAAAGTGCTTTAGTCAGCCTTGATCCCAGGTCTGTCTCCTCTTTTTATCCACAGTCCTATTaGATTCTCAGAACCAAGCTA +
Preference number: 5 (lower is better)
Translates to: GRQESALVSLDPRSVSSFYPQSY*ILRTKL
Trigger: TAGCTTGGTTCTGAGAATCAAATAGGACTGTGGATA...AAAAGAGGAGACAGACCTGGGATCAAGGCTGACTAAAGCACTTTCTTGTCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS-3UTR CAA 90 bp GATCTATTTACATACAAAACACAGACACATTATCTGGGAAAGTACTGGCCTGTGTGCAAGTGGAGAGGTTaGATGGATAAAATGGAGTGG +
Preference number: 5 (lower is better)
Translates to: DLFTYKTQTHYLGKYWPVCKWRG*MDKMEW
Trigger: CCACTCCATTTTATCCATCAAACCTCTCCACTTGCA...CACAGGCCAGTACTTTCCCAGATAATGTGTCTGTGTTTTGTATGTAAATAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CCA 72 bp GTGGCCGGGCAGCTGGAGCGGGTCAGCAGCGTGGTGTaGCGGCTCGAGAGGCTGCCGTCGGAGAGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: VAGQLERVSSVV*RLERLPSESRR
Trigger: CCGGCGGCTCTCCGACGGCAGCCTCTCGAGCCGCCACACCACGCTGCTGACCCGCTCCAGCTGCCCGGCCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367126.5
ENST00000612906.1
CDS GCA 72 bp AGCGGGTCAGCAGCGTGGTGTGGCGGCTCGAGAGGCTaGCGTCGGAGAGCCGCCGGCGCATCCTGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SGSAAWCGGSRG*RRRAAGASWAG
Trigger: CCCAGCCCAGGATGCGCCGGCGGCTCTCCGACGGCAGCCTCTCGAGCCGCCACACCACGCTGCTGACCCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367126.5
ENST00000612906.1
CDS CCA 72 bp TCGAGAGGCTGCCGTCGGAGAGCCGCCGGCGCATCCTaGGCTGGGGACCCCCACAGCAGGCAAGGTGACGCA +
Preference number: 6 (lower is better)
Translates to: SRGCRRRAAGAS*AGDPHSRQGDA
Trigger: TGCGTCACCTTGCCTGCTGTGGGGGTCCCCAGCCCAGGATGCGCCGGCGGCTCTCCGACGGCAGCCTCTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367126.5
ENST00000612906.1
CDS GCA 72 bp GCCAGGTCTGTCAGGGCTAAGTGCAGCACGAACAGGTaGATGCGGGAGCGCTTGCGGCCCAGCTGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: ARSVRAKCSTNR*MRERLRPSWPR
Trigger: CCTGGGCCAGCTGGGCCGCAAGCGCTCCCGCATGCACCTGTTCGTGCTGCACTTAGCCCTGACAGACCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CCA 72 bp TTCTGGAAGCCAAGAGCGGAAGCCCTTCAGCCTGCTTaGAGGCGCGGTCCGGGGCAGTCGGTGTCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: FWKPRAEALQPA*RRGPGQSVSRS
Trigger: TGAGCGCGACACCGACTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCCGCTCTTGGCTTCCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS GCA 72 bp ACTTTTCTGGAAGCCAAGAGCGGAAGCCCTTCAGCCTaGTTGGAGGCGCGGTCCGGGGCAGTCGGTGTCGCG +
Preference number: 6 (lower is better)
Translates to: TFLEAKSGSPSA*LEARSGAVGVA
Trigger: CGCGACACCGACTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCCGCTCTTGGCTTCCAGAAAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CAA 90 bp CTCCAAACTTTTCTGGAAGCCAAGAGCGGAAGCCCTTCAGCCTGCTaGGAGGCGCGGTCCGGGGCAGTCGGTGTCGCGCTCAGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LQTFLEAKSGSPSAC*EARSGAVGVALRAG
Trigger: TCCTGCCCTGAGCGCGACACCGACTGCCCCGGACCGCGCCTCCAAGCAGGCTGAAGGGCTTCCGCTCTTGGCTTCCAGAAAAGTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367126.5
CDS CAA 72 bp AAAGCCACATTGGTGGAATCTTCATCAGGGGCATTCTaGTCCCACACGGACCACATCTGGACACTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: KATLVESSSGAF*SHTDHIWTLKK
Trigger: CTTCTTCAGTGTCCAGATGTGGTCCGTGTGGGACAAGAATGCCCCTGATGAAGATTCCACCAATGTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367126.5