Pregenerated sensors for AURKC (Homo sapiens)
Ensembl gene IDs: ENSG00000105146Ensembl transcript IDs: ENST00000302804.12, ENST00000415300.6, ENST00000448930.5, ENST00000596375.1, ENST00000598785.5, ENST00000599062.5, ENST00000601799.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAAAGTCATCGACTGTGAGGCGCCGCATGGCTGGGCTGCTGGGCTaGTGGGCTGTTTGGTTTGCTGTAGCCACTGAAAGAGAGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SKSSTVRRRMAGLLG*WAVWFAVATEREEE Trigger: CTCCTCCTCTCTTTCAGTGGCTACAGCAAACCAAACAGCCCAGCAGCCCAGCAGCCCAGCCATGCGGCGCCTCACAGTCGATGACTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR-3UTR CCA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTATTTCCCGGCGCAGCTaGTGCTCCAGTCCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGISRRS*CSSPSF Trigger: GAAGGAAGGACTGGAGCACCAGCTGCGCCGGGAAAT...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCACAGGCGCAGGATATTaGGGTGTTGTAGATGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PHIYLEDASVSLTVGGALTGAGY*GVVDEP Trigger: AGGCTCATCTACAACACCCCAATATCCTGCGCCTGT...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCAGACCAGCCAAAATCTaGAATCTTCACCTCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: PHIYLEDASVSLTVGGALRPAKI*NLHLTP Trigger: AGGGGTGAGGTGAAGATTGCAGATTTTGGCTGGTCT...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| 3UTR-3UTR CCA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTGGCTGCTGGGCTGTTTaGTTTGCTGTAGCCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGGCWAV*FAVATE Trigger: TTCAGTGGCTACAGCAAACCAAACAGCCCAGCAGCC...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCGTAGAGCTCACCCCTTaGAGCATATTCCAGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: PHIYLEDASVSLTVGGALVELTP*SIFQNQ Trigger: CTGATTCTGGAATATGCTCCAAGGGGTGAGCTCTAC...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCTGTAGAGCTCACCCCTaGGAGCATATTCCAGAATCA | + |
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Preference number: 3 (lower is better) Translates to: PHIYLEDASVSLTVGGALCRAHP*EHIPES Trigger: TGATTCTGGAATATGCTCCAAGGGGTGAGCTCTACA...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| 3UTR GCA 72 bp | AATCACTTTCTTGTCATGGCAGTAGGTCAGGGCATCTaGCAACTCCTCTATTATCTCACCGTGGCTGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: NHFLVMAVGQGI*QLLYYLTVAVR Trigger: GCGCACAGCCACGGTGAGATAATAGAGGAGTTGGCAGATGCCCTGACCTACTGCCATGACAAGAAAGTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGGAGGCGCCGCATGGCTaGGCTGCTGGGCTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPEAPHG*AAGLLG Trigger: GCCCAGCAGCCCAGCAGCCCAGCCATGCGGCGCCTC...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCGAGGCGCCGCATGGCTaGGCTGCTGGGCTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLEAPHG*AAGLLG Trigger: GCCCAGCAGCCCAGCAGCCCAGCCATGCGGCGCCTC...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGCATGGGGAGAAGAGGTaGGGGCGCGGACGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPHGEKR*GRGRLP Trigger: AGGAAGGCGTCCGCGCCCTCACCTCTTCTCCCCATG...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGCTTCGGGAGTGGGCCTaGACCCAGGGGTGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRLREWA*TQGCFR Trigger: CCTGAAGCACCCCTGGGTTCAGGCCCACTCCCGAAG...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGGCGCGGACGCCTTCCTaGACCCTCTGGATGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRARTPS*TLWMAV Trigger: AACAGCCATCCAGAGGGTTCAGGAAGGCGTCCGCGC...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCCAAAGTCATCGACTGTaGGGCGCCGCATGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALQSHRL*GAAWLG Trigger: GCCCAGCCATGCGGCGCCTCACAGTCGATGACTTTG...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCCAAAGTCATCGACTGTaGGGCGCCGCATGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLQSHRL*GAAWLG Trigger: GCCCAGCCATGCGGCGCCTCACAGTCGATGACTTTG...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCGCTCAGGAAGCCATCTaGGCACAGGGAGGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALAQEAI*AQGGST Trigger: GGTGCTGCCTCCCTGTGCTCAGATGGCTTCCTGAGC...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGCACATGTGTCTTCTGTaGACCCGACCCCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPHMCLL*TRPLAQ Trigger: CTGGGCCAGGGGTCGGGTGCACAGAAGACACATGTG...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGGGGTGCTTCAGGATCTaGGCCAGGGGCAGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRGCFRI*ARGSLS Trigger: GGAGAGACTGCCCCTGGCCCAGATCCTGAAGCACCC...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCGGGTGCTTCAGGATCTaGGCCAGGGGCAGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLGCFRI*ARGSLS Trigger: GGAGAGACTGCCCCTGGCCCAGATCCTGAAGCACCC...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGTCTTCGCCTGCAGGTTaGGCTTTGCCCAGCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRSSPAG*ALPSCT Trigger: GGTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGA...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGTCCCGGCGCAGCTGGTaGTCCAGTCCTTCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRSRRSW*SSPSFS Trigger: AGAGAAGGAAGGACTGGAGCACCAGCTGCGCCGGGA...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGATTTCCCGGCGCAGCTaGTGCTCCAGTCCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPISRRS*CSSPSF Trigger: GAAGGAAGGACTGGAGCACCAGCTGCGCCGGGAAAT...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGTCCCAAATTTCCCCTTaGCCAGGGGACGCCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPSQISP*PGDARF Trigger: AAATCGGGCGTCCCCTGGGCAAGGGGAAATTTGGGA...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGCTCAGGGAGGGGGTGTaGACAGACCAGCCAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPLREGV*TDQPKS Trigger: AGATTTTGGCTGGTCTGTGCACACCCCCTCCCTGAG...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCCCTGAACCCTCTGGATaGCTGTTCCCGTTCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALPEPSG*LFPFTG Trigger: CCCTGTGAACGGGAACAGCCATCCAGAGGGTTCAGG...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCGCTGCACCACAGCTCTaGGGGAGCTCATGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTAAPQL*GSSWGE Trigger: TTCTCCCCATGAGCTCCCCCAGAGCTGTGGTGCAGC...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGATTTCCCGGCGCAGCTaGTGCTCCAGTCCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRISRRS*CSSPSF Trigger: GAAGGAAGGACTGGAGCACCAGCTGCGCCGGGAAAT...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGCCTGCGTCCTTTCTCTaGCGCTGGCTCTCACACTCT | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRPASFL*RWLSHS Trigger: AGAGTGTGAGAGCCAGCGCCAGAGAAAGGACGCAGG...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCTCCCAAATTTCCCCTTaGCCAGGGGACGCCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLSQISP*PGDARF Trigger: AAATCGGGCGTCCCCTGGGCAAGGGGAAATTTGGGA...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCCTCAGGGAGGGGGTGTaGACAGACCAGCCAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALLREGV*TDQPKS Trigger: AGATTTTGGCTGGTCTGTGCACACCCCCTCCCTGAG...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGTCCTTTCTCTGGCGCTaGCTCTCACACTCTTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRSFLWR*LSHSSP Trigger: AGGCGAAGAGTGTGAGAGCCAGCGCCAGAGAAAGGA...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTCTGCAGGTTGAGCTTTaGCCAGCTGCACCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGLQVEL*PAAPQL Trigger: GAGCTGTGGTGCAGCTGGGCAAAGCTCAACCTGCAG...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCAGGGCCACAATGAAATaGCTTTCCTTGAGCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALRATMK*LSLSRA Trigger: GGCTCGGCTCAAGGAAAGCCATTTCATTGTGGCCCT...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGTTGGGGTGTTGTAGATaGGCCTGGATCTCAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPLGCCR*AWISIS Trigger: GGAAATTGAGATCCAGGCTCATCTACAACACCCCAA...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCCCAAGGGCTGGTATCTaGGAAGCCTGGAAATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLPRAGI*EAWKSS Trigger: ACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGG...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCCCAAGGGCTGGTATCTaGGAAGCCTGGAAATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALPRAGI*EAWKSS Trigger: ACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGG...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGAGACCAGCCAAAATCTaGAATCTTCACCTCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPRPAKI*NLHLTP Trigger: AGGGGTGAGGTGAAGATTGCAGATTTTGGCTGGTCT...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGGTAGGTCAGGGCATCTaGCAACTCCTCTATTATCTC | + |
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Preference number: 4 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPVGQGI*QLLYYL Trigger: GAGATAATAGAGGAGTTGGCAGATGCCCTGACCTAC...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTCTCACACTCTTCGCCTaGAGGTTGAGCTTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGLTLFA*RLSFAQ Trigger: CTGGGCAAAGCTCAACCTGCAGGCGAAGAGTGTGAG...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGACAGGCGCAGGATATTaGGGTGTTGTAGATGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRTGAGY*GVVDEP Trigger: AGGCTCATCTACAACACCCCAATATCCTGCGCCTGT...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGAGTCTCTCCAAGGGCTaGTATCTGAGAAGCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRSLSKG*YLRSLE Trigger: TTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACT...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCAGTCTCTCCAAGGGCTaGTATCTGAGAAGCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PHIYLEDASVSLTVGGALSLSKG*YLRSLE Trigger: TTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACT...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCGGCTGCTGGGCTGTTTaGTTTGCTGTAGCCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTGCWAV*FAVATE Trigger: TTCAGTGGCTACAGCAAACCAAACAGCCCAGCAGCC...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCTTGGGGTGTTGTAGATaGGCCTGGATCTCAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLLGCCR*AWISIS Trigger: GGAAATTGAGATCCAGGCTCATCTACAACACCCCAA...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGGTAGGTCAGGGCATCTaGCAACTCCTCTATTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRVGQGI*QLLYYL Trigger: GAGATAATAGAGGAGTTGGCAGATGCCCTGACCTAC...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCACAGGCGCAGGATATTaGGGTGTTGTAGATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTTGAGY*GVVDEP Trigger: AGGCTCATCTACAACACCCCAATATCCTGCGCCTGT...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR TCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCACCTCACATCTACCTTaGGGATGCGTCTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTTSHLP*GCVCKS Trigger: AGACTTACAGACGCATCCTCAAGGTAGATGTGAGGT...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGCAGGTACACCCGGCGTaGATCATGGAAATAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRQVHPA*IMEIVI Trigger: TATAACTATTTCCATGATGCACGCCGGGTGTACCTG...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCAGACCAGCCAAAATCTaGAATCTTCACCTCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTRPAKI*NLHLTP Trigger: AGGGGTGAGGTGAAGATTGCAGATTTTGGCTGGTCT...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTTGAGGATCTCACCGTGGCTGTaGGCTGTTCATCTAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRAPRGIDSGNLTSTLRISPWL*AVHLIS Trigger: AGAAATTAGATGAACAGCGCACAGCCACGGTGAGAT...CCTCAAGGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCGTAGAGCTCACCCCTTaGAGCATATTCCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTVELTP*SIFQNQ Trigger: CTGATTCTGGAATATGCTCCAAGGGGTGAGCTCTAC...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCTCTATTATCTCACCGTaGCTGTGCGCTGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLSIISP*LCAVHL Trigger: TAGATGAACAGCGCACAGCCACGGTGAGATAATAGA...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR GCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCATCTCACCGTGGCTGTaGGCTGTTCATCTAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTISPWL*AVHLIS Trigger: AGAAATTAGATGAACAGCGCACAGCCACGGTGAGAT...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTGTAGAGCTCACCCCTTaGAGCATATTCCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGVELTP*SIFQNQ Trigger: CTGATTCTGGAATATGCTCCAAGGGGTGAGCTCTAC...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCTCTATTATCTCACCGTaGCTGTGCGCTGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTSIISP*LCAVHL Trigger: TAGATGAACAGCGCACAGCCACGGTGAGATAATAGA...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS GCA 90 bp | GGAGCCTCAGTCCAGGGTTCCCGGGTTGGGGCGGAACTGGAGTGCTaGGGTCCGGGCTGGGCACTGAAAGCGAGGGCCAGGGGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GASVQGSRVGAELEC*GPGWALKARARGEA Trigger: GGCCTCACCCCTGGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGGAACCCTGGACTGAGGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS GCA 90 bp | ACGGGAGCCTCAGTCCAGGGTTCCCGGGTTGGGGCGGAACTGGAGTaGTGCGGTCCGGGCTGGGCACTGAAAGCGAGGGCCAGGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGASVQGSRVGAELE*CGPGWALKARARGE Trigger: CTCACCCCTGGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGGAACCCTGGACTGAGGCTCCCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS CCA 90 bp | CAGGGTTCCCGGGTTGGGGCGGAACTGGAGTGCTGCGGTCCGGGCTaGGCACTGAAAGCGAGGGCCAGGGGTGAGGCCCGAGAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSRVGAELECCGPG*ALKARARGEAREGR Trigger: CCTTCCTTCTCGGGCCTCACCCCTGGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGGAACCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS TCA 90 bp | CCCGGGTTGGGGCGGAACTGGAGTGCTGCGGTCCGGGCTGGGCACTaGAAGCGAGGGCCAGGGGTGAGGCCCGAGAAGGAAGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGLGRNWSAAVRAGH*KRGPGVRPEKEGDR Trigger: TCTGTCTCCTTCCTTCTCGGGCCTCACCCCTGGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS TCA 90 bp | TGGGGGAGCTCATGGGGAGAAGAGGTGAGGGCGCGGACGCCTTCCTaGACCCTCTGGATGGCTGTTCCCGTTCACAGGGTCCTGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WGSSWGEEVRARTPS*TLWMAVPVHRVLKG Trigger: CCCTTTCAGGACCCTGTGAACGGGAACAGCCATCCAGAGGGTTCAGGAAGGCGTCCGCGCCCTCACCTCTTCTCCCCATGAGCTCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000302804.12 ENST00000601799.5 |
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| CDS GCA 90 bp | TGCTACACAGGCTTCGGGATCCGCGGCGTCGTGAGCAGCCGTGGCTaGGCGGCCTTCTTTTATACCCGGCACCAACCGCTCAGAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CYTGFGIRGVVSSRG*AAFFYTRHQPLREV Trigger: TACCTCTCTGAGCGGTTGGTGCCGGGTATAAAAGAAGGCCGCGCAGCCACGGCTGCTCACGACGCCGCGGATCCCGAAGCCTGTGTAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415300.6 ENST00000448930.5 |
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| CDS CCA 90 bp | TCACTGCTACACAGGCTTCGGGATCCGCGGCGTCGTGAGCAGCCGTaGCTGCGCGGCCTTCTTTTATACCCGGCACCAACCGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLHRLRDPRRREQP*LRGLLLYPAPTAQR Trigger: TCTCTGAGCGGTTGGTGCCGGGTATAAAAGAAGGCCGCGCAGCCACGGCTGCTCACGACGCCGCGGATCCCGAAGCCTGTGTAGCAGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415300.6 ENST00000448930.5 |
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| CDS CCA 90 bp | AATAGAAAGGACAGAAACGGGAGCCTCAGTCCAGGGTTCCCGGGTTaGGGCGGAACTGGAGTGCTGCGGTCCGGGCTGGGCACTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NRKDRNGSLSPGFPG*GGTGVLRSGLGTES Trigger: GCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGGAACCCTGGACTGAGGCTCCCGTTTCTGTCCTTTCTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS GCA 90 bp | TCAAAGTCATCGACTGTGAGGCGCCGCATGGCTGGGCTGCTGGGCTaGTGGGCTGTTTGGTTTGCTGTAGCCAACTCTTCGCCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKSSTVRRRMAGLLG*WAVWFAVANSSPAG Trigger: ACCTGCAGGCGAAGAGTTGGCTACAGCAAACCAAACAGCCCAGCAGCCCAGCAGCCCAGCCATGCGGCGCCTCACAGTCGATGACTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302804.12 |
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| CDS GCA 90 bp | TCAAAGTCATCGACTGTGAGGCGCCGCATGGCTGGGCTGCTGGGCTaGTGGGCTGTTTGGTTTGCTGTAGCCACCTCACTGATGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSTVRRRMAGLLG*WAVWFAVATSLMSH Trigger: GTGAGACATCAGTGAGGTGGCTACAGCAAACCAAACAGCCCAGCAGCCCAGCAGCCCAGCCATGCGGCGCCTCACAGTCGATGACTTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS-3UTR CAA 90 bp | CCTCACATCTACCTTGAGGATGCGTCTGTAAGTCTCACTGTGGGAGGCGCTCTCCTCTTCGCCTGCAGGTaGAGCTTTGCCCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PHIYLEDASVSLTVGGALLFACR*SFAQLH Trigger: GTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGAG...GAGAGCGCCTCCCACAGTGAGACTTACAGACGCATCCTCAAGGTAGATGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS-3UTR CAA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGTTCCCAAATTTCCCCTaGCCCAGGGGACGCCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPFPNFP*PRGRPI Trigger: AATCGGGCGTCCCCTGGGCAAGGGGAAATTTGGGAA...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CAA 90 bp | AGAAGCCTGGAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCTTCCCAAATTTCCCCTaGCCCAGGGGACGCCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSLEIKSRAPRGIDSGNLFPNFP*PRGRPI Trigger: AATCGGGCGTCCCCTGGGCAAGGGGAAATTTGGGAA...GAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTCCAGGCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS CCA 90 bp | TTCTTTTATACCCGGCACCAACCGCTCAGAGAGGTACTTCCTGGCTaGCTCCTATTGGCTGAAATTCCTGACGCCATCGGAAGTGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFYTRHQPLREVLPG*LLLAEIPDAIGSAP Trigger: GGGCGCACTTCCGATGGCGTCAGGAATTTCAGCCAATAGGAGCCAGCCAGGAAGTACCTCTCTGAGCGGTTGGTGCCGGGTATAAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS-3UTR CAA 90 bp | GAAATCAAGTCCCGGGCCCCCAGAGGCATTGATAGTGGAAACCTCACATCTACCGGGCCCCCAGAGGCATaGATAGTGGAAACCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: EIKSRAPRGIDSGNLTSTGPPEA*IVETSH Trigger: ATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCC...GGTAGATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCCGGGACTTGATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CAA 90 bp | CAGGGGCAGTCTCTCCAAGGGCTGGTATCTGAGAAGCCTGGAAATCAAGTCCCGTGTAGAGCTCACCCCTaGGAGCATATTCCAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: QGQSLQGLVSEKPGNQVPCRAHP*EHIPES Trigger: TGATTCTGGAATATGCTCCAAGGGGTGAGCTCTACA...CGGGACTTGATTTCCAGGCTTCTCAGATACCAGCCCTTGGAGAGACTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596375.1 ENST00000601799.5 |
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| CDS-3UTR CAA 90 bp | GGTACACCCGGCGTGCATCATGGAAATAGTTATACAGGCGCAGGATATTGGGGTGGGCCCCCAGAGGCATaGATAGTGGAAACCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GTPGVHHGNSYTGAGYWGGPPEA*IVETSH Trigger: ATGTGAGGTTTCCACTATCAATGCCTCTGGGGGCCC...ACCCCAATATCCTGCGCCTGTATAACTATTTCCATGATGCACGCCGGGTGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS CCA 72 bp | CGGGTTGGGGCGGAACTGGAGTGCTGCGGTCCGGGCTaGGCACTGAAAGCGAGGGCCAGGGGTGAGGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RVGAELECCGPG*ALKARARGEAR Trigger: TCGGGCCTCACCCCTGGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS GCA 72 bp | TCAGTCCAGGGTTCCCGGGTTGGGGCGGAACTGGAGTaGTGCGGTCCGGGCTGGGCACTGAAAGCGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQGSRVGAELE*CGPGWALKARA Trigger: GGCCCTCGCTTTCAGTGCCCAGCCCGGACCGCAGCACTCCAGTTCCGCCCCAACCCGGGAACCCTGGACTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS GCA 72 bp | GGCTTCGGGATCCGCGGCGTCGTGAGCAGCCGTGGCTaGGCGGCCTTCTTTTATACCCGGCACCAACCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFGIRGVVSSRG*AAFFYTRHQPL Trigger: GAGCGGTTGGTGCCGGGTATAAAAGAAGGCCGCGCAGCCACGGCTGCTCACGACGCCGCGGATCCCGAAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000302804.12 ENST00000415300.6 ENST00000448930.5 |
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| CDS CCA 72 bp | CACAGGCTTCGGGATCCGCGGCGTCGTGAGCAGCCGTaGCTGCGCGGCCTTCTTTTATACCCGGCACCAACC | + |
|
Preference number: 6 (lower is better) Translates to: HRLRDPRRREQP*LRGLLLYPAPT Trigger: GGTTGGTGCCGGGTATAAAAGAAGGCCGCGCAGCCACGGCTGCTCACGACGCCGCGGATCCCGAAGCCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000302804.12 ENST00000415300.6 ENST00000448930.5 |
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| CDS TCA 72 bp | CTCACTGCTACACAGGCTTCGGGATCCGCGGCGTCGTaGGCAGCCGTGGCTGCGCGGCCTTCTTTTATACCC | + |
|
Preference number: 6 (lower is better) Translates to: LTATQASGSAAS*AAVAARPSFIP Trigger: GGGTATAAAAGAAGGCCGCGCAGCCACGGCTGCTCACGACGCCGCGGATCCCGAAGCCTGTGTAGCAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000302804.12 ENST00000415300.6 ENST00000448930.5 |
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| CDS TCA 72 bp | TCATGGGGAGAAGAGGTGAGGGCGCGGACGCCTTCCTaGACCCTCTGGATGGCTGTTCCCGTTCACAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWGEEVRARTPS*TLWMAVPVHRV Trigger: GACCCTGTGAACGGGAACAGCCATCCAGAGGGTTCAGGAAGGCGTCCGCGCCCTCACCTCTTCTCCCCATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000302804.12 ENST00000601799.5 |
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| CDS GCA 72 bp | GCTGGCTCTCACACTCTTCGCCTGCAGGTTGAGCTTTaGCCAGCTGCACCACAGCTCTGGGGGAGCTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSHTLRLQVEL*PAAPQLWGSSW Trigger: CCATGAGCTCCCCCAGAGCTGTGGTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGAGTGTGAGAGCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS GCA 72 bp | GTCCTTTCTCTGGCGCTGGCTCTCACACTCTTCGCCTaGAGGTTGAGCTTTGCCCAGCTGCACCACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLSLALALTLFA*RLSFAQLHHSS Trigger: AGAGCTGTGGTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGAGTGTGAGAGCCAGCGCCAGAGAAAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601799.5 |
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| CDS GCA 72 bp | ACTTTCTGGCCGGGGCGCTTCCAATCCTGCTCGTCCTaGAGCCTCACTGATGTCTCACTGCTACACAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TFWPGRFQSCSS*SLTDVSLLHRL Trigger: AAGCCTGTGTAGCAGTGAGACATCAGTGAGGCTGCAGGACGAGCAGGATTGGAAGCGCCCCGGCCAGAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302804.12 |
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| CDS GCA 72 bp | GTTTGGTTTGCTGTAGCCACCTCACTGATGTCTCACTaGTACACAGGCTTCGGGATCCGCGGCGTCGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VWFAVATSLMSH*YTGFGIRGVVS Trigger: GCTCACGACGCCGCGGATCCCGAAGCCTGTGTAGCAGTGAGACATCAGTGAGGTGGCTACAGCAAACCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS CCA 72 bp | ACCCGGCACCAACCGCTCAGAGAGGTACTTCCTGGCTaGCTCCTATTGGCTGAAATTCCTGACGCCATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRHQPLREVLPG*LLLAEIPDAIG Trigger: TCCGATGGCGTCAGGAATTTCAGCCAATAGGAGCCAGCCAGGAAGTACCTCTCTGAGCGGTTGGTGCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
||
| CDS CAA 90 bp | ACCCGGCACCAACCGCTCAGAGAGGTACTTCCTGGCTGGCTCCTATaGGCTGAAATTCCTGACGCCATCGGAAGTGCGCCCAATAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRHQPLREVLPGWLL*AEIPDAIGSAPNRK Trigger: CTTTCTATTGGGCGCACTTCCGATGGCGTCAGGAATTTCAGCCAATAGGAGCCAGCCAGGAAGTACCTCTCTGAGCGGTTGGTGCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
||
| CDS GCA 72 bp | CTGGGCTGTTTGGTTTGCTGTAGCCAACTCTTCGCCTaGAGGTTGAGCTTTGCCCAGCTGCACCACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGCLVCCSQLFA*RLSFAQLHHSS Trigger: AGAGCTGTGGTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGAGTTGGCTACAGCAAACCAAACAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302804.12 |
||
| CDS CCA 72 bp | AACCGCTCAGAGAGGTACTTCCTGGCTGGCTCCTATTaGCTGAAATTCCTGACGCCATCGGAAGTGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: NRSERYFLAGSY*LKFLTPSEVRP Trigger: TGGGCGCACTTCCGATGGCGTCAGGAATTTCAGCCAATAGGAGCCAGCCAGGAAGTACCTCTCTGAGCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448930.5 |
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| CDS GCA 72 bp | AATCACTTTCTTGTCATGGCAGTAGGTCAGGGCATCTaGCAACTCCTCTATTATCGTGGCTGTGCGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NHFLVMAVGQGI*QLLYYRGCALF Trigger: GAACAGCGCACAGCCACGATAATAGAGGAGTTGGCAGATGCCCTGACCTACTGCCATGACAAGAAAGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000302804.12 ENST00000415300.6 ENST00000448930.5 ENST00000598785.5 ENST00000599062.5 |
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