Pregenerated sensors for AURKAIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175756Ensembl transcript IDs: ENST00000321751.9, ENST00000338338.9, ENST00000338370.7, ENST00000378853.3, ENST00000489799.1, ENST00000496905.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAGGCGCCCCAGGAGCATaGTCTGTGGGCGGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPGAPGA*SVGGGH Trigger: GTGGCCGCCGCCCACAGACCATGCTCCTGGGGCGCC...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCGCGGCCCCCGATTCTaGATTGGCTCAGGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAARGPRF*IGSGPA Trigger: GGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGGCGCCCCAGGAGCATaGTCTGTGGGCGGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGGAPGA*SVGGGH Trigger: GTGGCCGCCGCCCACAGACCATGCTCCTGGGGCGCC...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAAGAGGCCGCCCTACCTaGGCCGGCCGGCGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPRGRPT*AGRRCA Trigger: AGCACATCGCCGGCCGGCCCAGGTAGGGCGGCCTCT...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAGAGGCCGCCCTACCTaGGCCGGCCGGCGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGARGRPT*AGRRCA Trigger: AGCACATCGCCGGCCGGCCCAGGTAGGGCGGCCTCT...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACCCCCGATTCTGCATTaGCTCAGGCCCCGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPPPILH*LRPRRA Trigger: GGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR GCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCGGCCGGCCGGCGATGTaGTGTAAAGGGGCCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGAGRPAM*CKGARR Trigger: TCTGCGGGCCCCTTTACAGCACATCGCCGGCCGGCC...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAGGCCGGCCGGCGATGTaGTGTAAAGGGGCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPGRPAM*CKGARR Trigger: TCTGCGGGCCCCTTTACAGCACATCGCCGGCCGGCC...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCAGGAGCATGGTCTGTaGGCGGCGGCCACAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAQEHGL*AAATGP Trigger: GGGACCTGTGGCCGCCGCCCACAGACCATGCTCCTG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACAGGAGCATGGTCTGTaGGCGGCGGCCACAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPQEHGL*AAATGP Trigger: GGGACCTGTGGCCGCCGCCCACAGACCATGCTCCTG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCAGGAGCATGGTCTGTaGGCGGCGGCCACAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGAQEHGL*AAATGP Trigger: GGGACCTGTGGCCGCCGCCCACAGACCATGCTCCTG...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCAGAGGCCGCCCTACCTaGGCCGGCCGGCGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGRGRPT*AGRRCA Trigger: AGCACATCGCCGGCCGGCCCAGGTAGGGCGGCCTCT...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR TCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACGACGCGGCTCAAATTaGCCGTTCTGCGGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPRRGSN*PFCGRP Trigger: AGGGCGGCCGCAGAACGGTCAATTTGAGCCGCGTCG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR GCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGGCCGGCCGGCGATGTaGTGTAAAGGGGCCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGGRPAM*CKGARR Trigger: TCTGCGGGCCCCTTTACAGCACATCGCCGGCCGGCC...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCTCCCGGTATCCAGTCTaGGCAGGAAGCAGCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGASRYPV*AGSSGP Trigger: CGGCCCGCTGCTTCCTGCCCAGACTGGATACCGGGA...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGTCCCGGTATCCAGTCTaGGCAGGAAGCAGCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAASRYPV*AGSSGP Trigger: CGGCCCGCTGCTTCCTGCCCAGACTGGATACCGGGA...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGAGGGGGTGCGGGCCCTaGATATACCCGCAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAARGCGP*IYPQVQ Trigger: CTGGACCTGCGGGTATATCCAGGGCCCGCACCCCCT...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR GCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCACAATCCCAGGGGGTaGGGGCCCTGGATATACCCG | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAHNPRG*GPWIYP Trigger: CGGGTATATCCAGGGCCCGCACCCCCTGGGATTGTG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCTCCCGGTATCCAGTCTaGGCAGGAAGCAGCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGSRYPV*AGSSGP Trigger: CGGCCCGCTGCTTCCTGCCCAGACTGGATACCGGGA...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGALRRPS*TFLRRN Trigger: GTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAG...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAALRRPS*TFLRRN Trigger: GTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPLRRPS*TFLRRN Trigger: GTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAGAGCTGGAACACAAGTaGCCGTTCAGGTCAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPELEHK*PFRSGG Trigger: GCCGCCTGACCTGAACGGGCACTTGTGTTCCAGCTC...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338370.7 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACTGGTAGGATTGCGGTaGAGCCACAGTCCCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPLVGLR*SHSPCG Trigger: ACCGCAGGGACTGTGGCTCCACCGCAATCCTACCAG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCCTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGLRRPS*TFLRRN Trigger: GTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAG...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCCGCCTTCAGCCAGATaGGCCTCAGGTCTTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGAPPSAR*ASGLSR Trigger: TCGAGAAAGACCTGAGGCGCATCTGGCTGAAGGCGG...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACCGCCTTCAGCCAGATaGGCCTCAGGTCTTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPPPSAR*ASGLSR Trigger: TCGAGAAAGACCTGAGGCGCATCTGGCTGAAGGCGG...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCGCCTTCAGCCAGATaGGCCTCAGGTCTTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAPPSAR*ASGLSR Trigger: TCGAGAAAGACCTGAGGCGCATCTGGCTGAAGGCGG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCCTGGTAGGATTGCGGTaGAGCCACAGTCCCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SSENLLLRITAATGGKGGLVGLR*SHSPCG Trigger: ACCGCAGGGACTGTGGCTCCACCGCAATCCTACCAG...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCATTCCGGTACTTGTGGTaGTTCATCTTCCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPFRYLW*FIFRRR Trigger: CCGCCGGCGGAAGATGAACCACCACAAGTACCGGAA...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCTTCCGGTACTTGTGGTaGTTCATCTTCCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGAFRYLW*FIFRRR Trigger: CCGCCGGCGGAAGATGAACCACCACAAGTACCGGAA...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGTTCCGGTACTTGTGGTaGTTCATCTTCCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAFRYLW*FIFRRR Trigger: CCGCCGGCGGAAGATGAACCACCACAAGTACCGGAA...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CCA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAAGGTCCCAGGGGAGCTaGAACACAAGTGCCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPRSQGS*NTSARS Trigger: TGAACGGGCACTTGTGTTCCAGCTCCCCTGGGACCT...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338370.7 |
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| CDS-3UTR GCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCACAAGGAGGACTTTaGTTCCAACACAGCTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAPQGGL*FQHSSR Trigger: GCGCGAGCTGTGTTGGAAGCAAAGTCCTCCTTGTGG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338370.7 |
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| CDS-3UTR CCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCTTCCTCAGCTCCGCCTaGTCCCTTACGGAGGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGAFLSSA*SLTEAK Trigger: TTTTGCCTCCGTAAGGGACCAGGCGGAGCTGAGGAA...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR GCA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGTCTTCAGCACGTTTTTaGACTGAATTTGAGGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: PLRIYYYGSQQQRAGRAASSARF*TEFEAH Trigger: ATGCGCCTCAAATTCAGTGCAAAAACGTGCTGAAGA...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR GCA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCTCTTCAGCACGTTTTTaGACTGAATTTGAGGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: SENLLLRITAATGGKGGASSARF*TEFEAH Trigger: ATGCGCCTCAAATTCAGTGCAAAAACGTGCTGAAGA...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS GCA 90 bp | GTTCCTACGCACAGCGCCCGCTGGCGTCCTCGCGGCCCCCGATTCTaGATTGGCTCAGGCCCCGCCGGGCCCGAAAGGCGACGGTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: VPTHSARWRPRGPRF*IGSGPAGPERRRFP Trigger: CGGAAACCGTCGCCTTTCGGGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCGCTGTGCGTAGGAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS GCA 90 bp | GTCTGTGGGCGGCGGCCACAGGTCCCAGGGGAGCTGGAACACAAGTaGCCGTTCAGGTCAGGCGGCAGCGCCTTCAGTAGTCGCGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VCGRRPQVPGELEHK*PFRSGGSAFSSRGR Trigger: CCGCCCGCGACTACTGAAGGCGCTGCCGCCTGACCTGAACGGGCACTTGTGTTCCAGCTCCCCTGGGACCTGTGGCCGCCGCCCACAGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000496905.1 |
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| CDS GCA 90 bp | CCCTGCCCCAGCGGAGCTGCTGAGACCCGCACTCCTAACCAGGTGTaGATCCTCCCATCCGCCCCCGCGCGGCTTCCTACCTGCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PCPSGAAETRTPNQV*ILPSAPARLPTCPR Trigger: CCTTGGGCAGGTAGGAAGCCGCGCGGGGGCGGATGGGAGGATGCACACCTGGTTAGGAGTGCGGGTCTCAGCAGCTCCGCTGGGGCAGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS TCA 90 bp | AGACGCCACGGTCACCGCTCGCGAGACCACACAGGCCCGTCGGGTTaGGGAGCAGCAGGTTCGTCCCAGCGAGGATCCCCCGCACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: RRHGHRSRDHTGPSG*GAAGSSQRGSPAPH Trigger: ATGAGGTGCGGGGGATCCTCGCTGGGACGAACCTGCTGCTCCTCAACCCGACGGGCCTGTGTGGTCTCGCGAGCGGTGACCGTGGCGTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489799.1 ENST00000496905.1 |
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| CDS TCA 90 bp | CGTCCCAGCGAGGATCCCCCGCACCTCATTCCTGGCCTGAACCCCTaGGGTTCCCTCTGTGAGCATCGGAAGCTGCCCAAGGAACGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RPSEDPPHLIPGLNP*GSLCEHRKLPKERP Trigger: GGGCCGTTCCTTGGGCAGCTTCCGATGCTCACAGAGGGAACCTCAGGGGTTCAGGCCAGGAATGAGGTGCGGGGGATCCTCGCTGGGACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496905.1 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCGCGCGAATCGCGTaGCCTGGCGCCCGGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAPARIA*PGARTL Trigger: GAGGGTCCGGGCGCCAGGCAACGCGATTCGCGCGGG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCCCCGCGCGAATCGCGTaGCCTGGCGCCCGGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSENLLLRITAATGGKGGPARIA*PGARTL Trigger: GAGGGTCCGGGCGCCAGGCAACGCGATTCGCGCGGG...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGGCCCCCGATTCTGCATaGGCTCAGGCCCCGCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAAPDSA*AQAPPG Trigger: GCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGC...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS TCA 90 bp | AGCAGGTTCGTCCCAGCGAGGATCCCCCGCACCTCATTCCTGGCCTaGACCCCTGAGGTTCCCTCTGTGAGCATCGGAAGCTGCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SRFVPARIPRTSFLA*TPEVPSVSIGSCPR Trigger: CCTTGGGCAGCTTCCGATGCTCACAGAGGGAACCTCAGGGGTTCAGGCCAGGAATGAGGTGCGGGGGATCCTCGCTGGGACGAACCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496905.1 |
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| CDS GCA 90 bp | ATCGGAAGCTTAGAGGGGAAAGAGTGTGTGTGTGGCCACCGGCCCTaGCCCAGCGGAGCTGCTGAGACCCGCACTCCTAACCAGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: IGSLEGKECVCGHRP*PSGAAETRTPNQVC Trigger: GCACACCTGGTTAGGAGTGCGGGTCTCAGCAGCTCCGCTGGGGCAGGGCCGGTGGCCACACACACACTCTTTCCCCTCTAAGCTTCCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS TCA 90 bp | AGCAGGTTCGTCCCAGCGAGGATCCCCCGCACCTCATTCCTGGCCTaGACCCCTGAGGTTCCCTCTGTGAGCATCGGAAGCTTAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SRFVPARIPRTSFLA*TPEVPSVSIGSLEG Trigger: CCCCTCTAAGCTTCCGATGCTCACAGAGGGAACCTCAGGGGTTCAGGCCAGGAATGAGGTGCGGGGGATCCTCGCTGGGACGAACCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGTCGACGCGGCTCAAATaGACCGTTCTGCGGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAASTRLK*TVLRPP Trigger: GGGCGGCCGCAGAACGGTCAATTTGAGCCGCGTCGA...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS-3UTR CAA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCGGACACTGGTAGGATaGCGGTGGAGCCACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SENLLLRITAATGGKGGARTLVG*RWSHSP Trigger: GGGACTGTGGCTCCACCGCAATCCTACCAGTGTCCG...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCGGACACTGGTAGGATaGCGGTGGAGCCACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAARTLVG*RWSHSP Trigger: GGGACTGTGGCTCCACCGCAATCCTACCAGTGTCCG...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS CCA 90 bp | AGGTCTTTCTCGAACTTGATCTGCTTGCGTCTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAACCGCGTCTTCTTCACCAGCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: RSFSNLICLRLRRPS*TFLRRNRVFFTSFR Trigger: CCGGAAGCTGGTGAAGAAGACGCGGTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAGACGCAAGCAGATCAAGTTCGAGAAAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCCGGACACTGGTAGGATaGCGGTGGAGCCACAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SSENLLLRITAATGGKGGRTLVG*RWSHSP Trigger: GGGACTGTGGCTCCACCGCAATCCTACCAGTGTCCG...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCATCGAACTTGATCTGCTaGCGTCTCAGGCGTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPSNLIC*RLRRPS Trigger: GGAGGGACGCCTGAGACGCAAGCAGATCAAGTTCGA...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCCCCACAAGGAGGACTTaGCTTCCAACACAGCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: SENLLLRITAATGGKGGAPTRRT*LPTQLA Trigger: CGCGAGCTGTGTTGGAAGCAAAGTCCTCCTTGTGGG...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338370.7 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGGTTTTTGCACTGAATTaGAGGCGCATCCGCGACGCC | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAAVFALN*RRIRDA Trigger: GGCGTCGCGGATGCGCCTCAAATTCAGTGCAAAAAC...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCTCGAACTTGATCTGCTaGCGTCTCAGGCGTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSENLLLRITAATGGKGGSNLIC*RLRRPS Trigger: GGAGGGACGCCTGAGACGCAAGCAGATCAAGTTCGA...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGTTTTTGCACTGAATTaGAGGCGCATCCGCGACGCC | + |
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Preference number: 5 (lower is better) Translates to: SSENLLLRITAATGGKGGVFALN*RRIRDA Trigger: GGCGTCGCGGATGCGCCTCAAATTCAGTGCAAAAAC...GCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | CCTCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGAGGTCTTTCTCGAACTaGATCTGCTTGCGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLRIYYYGSQQQRAGRAARSFSN*ICLRLR Trigger: CCTGAGACGCAAGCAGATCAAGTTCGAGAAAGACCT...CGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | CTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAAGGTCTTTCTCGAACTaGATCTGCTTGCGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LRIYYYGSQQQRAGRAAPRSFSN*ICLRLR Trigger: CCTGAGACGCAAGCAGATCAAGTTCGAGAAAGACCT...TGGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS-3UTR CAA 90 bp | TCTGAGAATTTATTACTACGGATCACAGCAGCAACGGGCGGGAAGGGCGGCGCCAGGTCTTTCTCGAACTaGATCTGCTTGCGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SENLLLRITAATGGKGGARSFSN*ICLRLR Trigger: CCTGAGACGCAAGCAGATCAAGTTCGAGAAAGACCT...GGCGCCGCCCTTCCCGCCCGTTGCTGCTGTGATCCGTAGTAATAAATTCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS CAA 72 bp | GCGCCCGCTGGCGTCCTCGCGGCCCCCGATTCTGCATaGGCTCAGGCCCCGCCGGGCCCGAAAGGCGACGGT | + |
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Preference number: 6 (lower is better) Translates to: APAGVLAAPDSA*AQAPPGPKGDG Trigger: ACCGTCGCCTTTCGGGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS GCA 72 bp | CACAGCGCCCGCTGGCGTCCTCGCGGCCCCCGATTCTaGATTGGCTCAGGCCCCGCCGGGCCCGAAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: HSARWRPRGPRF*IGSGPAGPERR Trigger: TCGCCTTTCGGGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCGCTGTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS CCA 72 bp | CGCCCGCTGGCGTCCTCGCGGCCCCCGATTCTGCATTaGCTCAGGCCCCGCCGGGCCCGAAAGGCGACGGTT | + |
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Preference number: 6 (lower is better) Translates to: RPLASSRPPILH*LRPRRARKATV Trigger: AACCGTCGCCTTTCGGGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS CCA 72 bp | AGCGGCCACCCGGCGGTTCCTACGCACAGCGCCCGCTaGCGTCCTCGCGGCCCCCGATTCTGCATTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGHPAVPTHSAR*RPRGPRFCIGS Trigger: TGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCGCTGTGCGTAGGAACCGCCGGGTGGCCGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS CAA 90 bp | CTACGCACAGCGCCCGCTGGCGTCCTCGCGGCCCCCGATTCTGCATaGGCTCAGGCCCCGCCGGGCCCGAAAGGCGACGGTTTCCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LRTAPAGVLAAPDSA*AQAPPGPKGDGFRL Trigger: TAACCGGAAACCGTCGCCTTTCGGGCCCGGCGGGGCCTGAGCCAATGCAGAATCGGGGGCCGCGAGGACGCCAGCGGGCGCTGTGCGTAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS GCA 72 bp | CAGCACTCCAGAGACGGGCCAAGGCGGGCGGCCGCCTaGAGAAAACCAGACGCCACGGTCACCGCTCGCGAG | + |
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Preference number: 6 (lower is better) Translates to: QHSRDGPRRAAA*RKPDATVTARE Trigger: CTCGCGAGCGGTGACCGTGGCGTCTGGTTTTCTGCAGGCGGCCGCCCGCCTTGGCCCGTCTCTGGAGTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS CAA 90 bp | CAGACGCCACGGTCACCGCTCGCGAGACCACACAGGCCCGTCGGGTaGAGGAGCAGCAGGTTCGTCCCAGCGAGGATCCCCCGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: QTPRSPLARPHRPVG*RSSRFVPARIPRTS Trigger: TGAGGTGCGGGGGATCCTCGCTGGGACGAACCTGCTGCTCCTCAACCCGACGGGCCTGTGTGGTCTCGCGAGCGGTGACCGTGGCGTCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000489799.1 ENST00000496905.1 |
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| CDS TCA 72 bp | GCCACAGGTCCCAGGGGAGCTCGACGCGGCTCAAATTaGCCGTTCTGCGGCCGCCCTCGGGCACTTCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: ATGPRGARRGSN*PFCGRPRALPV Trigger: GACCGGAAGTGCCCGAGGGCGGCCGCAGAACGGTCAATTTGAGCCGCGTCGAGCTCCCCTGGGACCTGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS TCA 72 bp | GGTCACCGCTCGCGAGACCACACAGGCCCGTCGGGTTaGGGAGCAGCAGGTTCGTCCCAGCGAGGATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GHRSRDHTGPSG*GAAGSSQRGSP Trigger: GGGGGATCCTCGCTGGGACGAACCTGCTGCTCCTCAACCCGACGGGCCTGTGTGGTCTCGCGAGCGGTGACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489799.1 ENST00000496905.1 |
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| CDS CCA 72 bp | TGGTCTGTGGGCGGCGGCCACAGGTCCCAGGGGAGCTaGAACACAAGTGCCCGTTCAGGTCAGGCGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: WSVGGGHRSQGS*NTSARSGQAAA Trigger: CGCTGCCGCCTGACCTGAACGGGCACTTGTGTTCCAGCTCCCCTGGGACCTGTGGCCGCCGCCCACAGACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000496905.1 |
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| CDS CAA 72 bp | GGCCACAGGTCCCAGGGGAGCTCGACGCGGCTCAAATaGACCGTTCTGCGGCCGCCCTCGGGCACTTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: GHRSQGSSTRLK*TVLRPPSGTSG Trigger: ACCGGAAGTGCCCGAGGGCGGCCGCAGAACGGTCAATTTGAGCCGCGTCGAGCTCCCCTGGGACCTGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338338.9 |
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| CDS CAA 72 bp | CGGTCACCGCTCGCGAGACCACACAGGCCCGTCGGGTaGAGGAGCAGCAGGTTCGTCCCAGCGAGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: RSPLARPHRPVG*RSSRFVPARIP Trigger: GGGGATCCTCGCTGGGACGAACCTGCTGCTCCTCAACCCGACGGGCCTGTGTGGTCTCGCGAGCGGTGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000489799.1 ENST00000496905.1 |
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| CDS GCA 72 bp | AGCGGAGCTGCTGAGACCCGCACTCCTAACCAGGTGTaGATCCTCCCATCCGCCCCCGCGCGGCTTCCTACC | + |
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Preference number: 6 (lower is better) Translates to: SGAAETRTPNQV*ILPSAPARLPT Trigger: GGTAGGAAGCCGCGCGGGGGCGGATGGGAGGATGCACACCTGGTTAGGAGTGCGGGTCTCAGCAGCTCCGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS GCA 72 bp | CGGCGGCCACAGGTCCCAGGGGAGCTGGAACACAAGTaGCCGTTCAGGTCAGGCGGCAGCGCCTTCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RRPQVPGELEHK*PFRSGGSAFSS Trigger: ACTACTGAAGGCGCTGCCGCCTGACCTGAACGGGCACTTGTGTTCCAGCTCCCCTGGGACCTGTGGCCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000496905.1 |
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| CDS GCA 72 bp | TGCATCCTCCCATCCGCCCCCGCGCGGCTTCCTACCTaGCCAAGGAACGGCCCTCAACAGCTGGGAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CILPSAPARLPT*PRNGPQQLGSQ Trigger: CTGACTTCCCAGCTGTTGAGGGCCGTTCCTTGGGCAGGTAGGAAGCCGCGCGGGGGCGGATGGGAGGATGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS GCA 72 bp | TTCTCCCTCCGCCACCCCAACCCACAAGGAGGACTTTaGTTCCAACACAGCTCGCGCCCCGAGGCTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FSLRHPNPQGGL*FQHSSRPEAPK Trigger: CTTGGGAGCCTCGGGGCGCGAGCTGTGTTGGAAGCAAAGTCCTCCTTGTGGGTTGGGGTGGCGGAGGGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338370.7 ENST00000496905.1 |
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| CDS GCA 72 bp | TTAGAGGGGAAAGAGTGTGTGTGTGGCCACCGGCCCTaGCCCAGCGGAGCTGCTGAGACCCGCACTCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: LEGKECVCGHRP*PSGAAETRTPN Trigger: GTTAGGAGTGCGGGTCTCAGCAGCTCCGCTGGGGCAGGGCCGGTGGCCACACACACACTCTTTCCCCTCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS CCA 72 bp | CCCTATCTGGCTGGGCGGACACTGGTAGGATTGCGGTaGAGCCACAGTCCCTGCGGTCCCGGTATCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PYLAGRTLVGLR*SHSPCGPGIQS Trigger: AGACTGGATACCGGGACCGCAGGGACTGTGGCTCCACCGCAATCCTACCAGTGTCCGCCCAGCCAGATAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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| CDS TCA 72 bp | GAGGATCCCCCGCACCTCATTCCTGGCCTGAACCCCTaGGGTTCCCTCTGTGAGCATCGGAAGCTGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: EDPPHLIPGLNP*GSLCEHRKLPK Trigger: CTTGGGCAGCTTCCGATGCTCACAGAGGGAACCTCAGGGGTTCAGGCCAGGAATGAGGTGCGGGGGATCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496905.1 |
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| CDS TCA 72 bp | GAGGATCCCCCGCACCTCATTCCTGGCCTGAACCCCTaGGGTTCCCTCTGTGAGCATCGGAAGCTTAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: EDPPHLIPGLNP*GSLCEHRKLRG Trigger: CCCTCTAAGCTTCCGATGCTCACAGAGGGAACCTCAGGGGTTCAGGCCAGGAATGAGGTGCGGGGGATCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489799.1 |
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| CDS CCA 72 bp | TCGAACTTGATCTGCTTGCGTCTCAGGCGTCCCTCCTaGACCTTCCTCCGCAGGAACCGCGTCTTCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: SNLICLRLRRPS*TFLRRNRVFFT Trigger: GGTGAAGAAGACGCGGTTCCTGCGGAGGAAGGTCCAGGAGGGACGCCTGAGACGCAAGCAGATCAAGTTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000321751.9 ENST00000338338.9 ENST00000338370.7 ENST00000378853.3 |
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