RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AUP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115307

Ensembl transcript IDs: ENST00000377526.4, ENST00000425118.5, ENST00000462297.1, ENST00000463900.5, ENST00000464887.1, ENST00000466894.5, ENST00000472800.1, ENST00000486234.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTaGCATCCTGTTCCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCT +
Preference number: 1 (lower is better)
Translates to: ELGEGCPQSPSCGSG*HPVPLSSVSLLGSS
Trigger: AGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CCA 90 bp CTTGCTTGCGCTCCTGCAGGCTCTCCTGCCGGGCCCAGGAAGACTTaGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: LACAPAGSPAGPRKT*QMLGLLAEGSPGQS
Trigger: GCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CCA 90 bp TCATCCTTCCCTTTTTACCACCCACCCATCCAGCCTGTTGTGAGTTaGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCC +
Preference number: 1 (lower is better)
Translates to: SSFPFYHPPIQPVVS*VRAAPSLRPAALGA
Trigger: GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGGATGGGTGGGTGGTAAAAAGGGAAGGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
3UTR TCA 90 bp GCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTaGGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTT +
Preference number: 1 (lower is better)
Translates to: APSLRPAALGAILFL*AQSASWARLSVNLL
Trigger: AAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR GCA 90 bp GCTCGTCTCTCTGTGAATCTCCTTCTTGCGTATTCATATAGTGCTTaGTTGCGCTCCTGCAGGCTCTCCTGCCGGGCCCAGGAAGACTTG +
Preference number: 1 (lower is better)
Translates to: ARLSVNLLLAYSYSA*LRSCRLSCRAQEDL
Trigger: CAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATTCACAGAGAGACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR GCA 90 bp GTGAATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTaGAGGCTCTCCTGCCGGGCCCAGGAAGACTTGGCAAATGTTAGG +
Preference number: 1 (lower is better)
Translates to: VNLLLAYSYSACLRS*RLSCRAQEDLANVR
Trigger: CCTAACATTTGCCAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCTCCGTCCTGCGGCTCTaGGTGCCATCCTGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCSVLRL*VPSCSF
Trigger: AAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGA...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
3UTR CAA 90 bp GGCTCTCCTGCCGGGCCCAGGAAGACTTGGCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGCCAGAGCTGGGAAACTGAGGTGATC +
Preference number: 2 (lower is better)
Translates to: GSPAGPRKTWQMLGL*AEGSPGQSWETEVI
Trigger: GATCACCTCAGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGGCAGGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CAA 90 bp TGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTaGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCT +
Preference number: 2 (lower is better)
Translates to: CPQSPSCGSGCHPVP*SSVSLLGSSLCESP
Trigger: AGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR TCA 90 bp CCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCGTTAGGGCTGTTGGCTaGGGGGTCACCGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PLSSVSLLGSSLCESPSCVRAVG*GVTGPE
Trigger: CTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAAC...GCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR CCA 90 bp GTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTTCACCGGGCCAGAGCTaGGAAACTGAGGTGATCACA +
Preference number: 2 (lower is better)
Translates to: VSVLRLWVPSCSFELSQPSPGQS*ETEVIT
Trigger: TGTGATCACCTCAGTTTCCCAGCTCTGGCCCGGTGA...AGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR GCA 90 bp GTGAATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCGAGTTGGGTGAGGGCTaGCCCCAGTCTCCGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VNLLLAYSYSACLRSCRLELGEG*PQSPSC
Trigger: GCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTC...GAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CAA 90 bp CGTCTCTCTGTGAATCTCCTTCTTGCGTATTCATATAGTGCTTGCTaGCGCTCCTGCAGGCTCTCCTGCCGGGCCCAGGAAGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: RLSVNLLLAYSYSAC*RSCRLSCRAQEDLA
Trigger: TGCCAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATTCACAGAGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR GCA 90 bp CCTGTTCCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTATTCATATAGTGCTTaGTTGCGCTCCTGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: PVPLSSVSLLGSSLCESPYSYSA*LRSCRL
Trigger: GAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATA...AGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR-3UTR CAA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCAGCCTGTTGTGAGTaGGGTGAGGGCTGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHPACCE*GEGCPQ
Trigger: CTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGG...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
3UTR TCA 72 bp CTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTaGGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: LRPAALGAILFL*AQSASWARLSV
Trigger: CACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CCA 72 bp CCTTTTTACCACCCACCCATCCAGCCTGTTGTGAGTTaGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCT +
Preference number: 3 (lower is better)
Translates to: PFYHPPIQPVVS*VRAAPSLRPAA
Trigger: AGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGGATGGGTGGGTGGTAAAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
3UTR-3UTR CAA 90 bp AATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGC +
Preference number: 3 (lower is better)
Translates to: NLLLAYSYSACLRSCRLSQMLGL*AEGSPG
Trigger: GCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTG...GGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCAGTCCGGAGTCCTCCTaGCGGGCCACGAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAISPESS*RATSPS
Trigger: GCTAGGGCTCGTGGCCCGGCAGGAGGACTCCGGACT...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGCTCCGGCCCCGGCCCTaGGGGAAGCTCCATAACTGC +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALLRPRP*GKLHNC
Trigger: GCAGTTATGGAGCTTCCCTCAGGGCCGGGGCCGGAG...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGGTTAGGGCTGTTGGCTaGGGGGTCACCGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SWVRAAPSLRPAALGAILVRAVG*GVTGPE
Trigger: CTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAAC...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGCTTGCTTGCGCTCCTaGAGGCTCTCCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLACLRS*RLSCRA
Trigger: GGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAGC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATGCTTGCTTGCGCTCCTaGAGGCTCTCCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHACLRS*RLSCRA
Trigger: GGCCCGGCAGGAGAGCCTGCAGGAGCGCAAGCAAGC...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGGAGTTGGGTGAGGGCTaGCCCCAGTCTCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SWVRAAPSLRPAALGAILELGEG*PQSPSC
Trigger: GCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTC...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCGAGTTGGGTGAGGGCTaGCCCCAGTCTCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGAELGEG*PQSPSC
Trigger: GCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTC...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCGCCCCTCCCGGCCATTaGTGGCCTCTTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIAPPGH*WPLPQG
Trigger: TCCCTGAGGAAGAGGCCACCAATGGCCGGGAGGGGC...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCC +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCLAARS*PGRRGS
Trigger: GGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAG...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCAGGACCCTGACACTGTaGTCCCGGAGTCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WVRAAPSLRPAALGAILFRTLTL*SRSPES
Trigger: GGACTCCGGACTCCGGGATCACAGTGTCAGGGTCCT...GAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTCACCCGGAAGCCGGTaGGAGTCAAAGAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGASPGSR*ESKSRS
Trigger: GGAGCGGCTCTTTGACTCGCACCGGCTTCCGGGTGA...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCTCCTGCAGGCTCTCCTaGCGGGCCCAGGAAGACTTG +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAISCRLS*RAQEDL
Trigger: CAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGA...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGCGAAGGACGCTGTCTaGCAGCGCGCAGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLAKDAV*QRAADQ
Trigger: CTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGGCCGCAGGGGCTCTTaGGAAGGCGGAGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGGRRGS*EGGVFG
Trigger: CCCAAAGACTCCGCCTTCCCAAGAGCCCCTGCGGCC...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp TGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGTCAGCTGGAGTaGGCCGTGTCCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WVRAAPSLRPAALGAILFLCQLE*AVSLSG
Trigger: GCCAGACAGGGACACGGCTCACTCCAGCTGACAAAG...GAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTTCCTGCAGGCTCTCCTaGCGGGCCCAGGAAGACTTG +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGSCRLS*RAQEDL
Trigger: CAAGTCTTCCTGGGCCCGGCAGGAGAGCCTGCAGGA...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCGAAGACTGGGCTGACTaGGGGCGCAATCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGAEDWAD*GRNLGC
Trigger: ACACCCCAGATTGCGCCCCCAGTCAGCCCAGTCTTC...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTCACCGGGCCAGAGCTaGGAAACTTGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SWVRAAPSLRPAALGAILSPGQS*ETWRQR
Trigger: CCTCTGCCTCCAAGTTTCCCAGCTCTGGCCCGGTGA...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377526.4
CDS-3UTR CCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCAGCCTGTTGTGAGTTaGGTGAGGGCTGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIQPVVS*VRAAPS
Trigger: ACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTCTCCGGCCCCGGCCCTaGGGGAAGCTCCATAACTGC +
Preference number: 4 (lower is better)
Translates to: VSVLRLWVPSCSFELSQPLRPRP*GKLHNC
Trigger: GCAGTTATGGAGCTTCCCTCAGGGCCGGGGCCGGAG...AGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCGCCCATTCATCTCCATaGAGCCCCGAGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGAAHSSP*SPETST
Trigger: TGTGCTGGTCTCGGGGCTTCATGGAGATGAATGGGC...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCAAAATGGCCAGGAACTaGAGCGCAGGAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCKMARN*SAGAPP
Trigger: GGGAGGGGCTCCTGCGCTTCAGTTCCTGGCCATTTT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATAAAATGGCCAGGAACTaGAGCGCAGGAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHKMARN*SAGAPP
Trigger: GGGAGGGGCTCCTGCGCTTCAGTTCCTGGCCATTTT...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGACCCAGGAGGCATCTaGCACCGTCACAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALDPGGI*HRHRDQ
Trigger: CTGGTCTCTGTGACGGTGTCAGATGCCTCCTGGGTC...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGCTTTGTCAGCTGGAGTaGGCCGTGTCCCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLLCQLE*AVSLSG
Trigger: GCCAGACAGGGACACGGCTCACTCCAGCTGACAAAG...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGAAAGAAGACTGGGCTaGCTGGGGGCGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALERRLG*LGAQSG
Trigger: CCCAGATTGCGCCCCCAGTCAGCCCAGTCTTCTTTC...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGGAAAGAAGACTGGGCTaGCTGGGGGCGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFEERRLG*LGAQSG
Trigger: CCCAGATTGCGCCCCCAGTCAGCCCAGTCTTCTTTC...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCCAGGTCTCTCTGGATaGCACCCAATGGCACATGGG +
Preference number: 4 (lower is better)
Translates to: WVRAAPSLRPAALGAILFPGLSG*HPMAHG
Trigger: CCCATGTGCCATTGGGTGTCATCCAGAGAGACCTGG...GAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGAAGCTCCATAACTGCTaGTTCAGGAGCGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFEKLHNC*FRSARP
Trigger: CGGCCGGGCGCTCCTGAAGCAGCAGTTATGGAGCTT...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGATAGCAGCAGAGGAGTaGGGGGAAGCCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGIAAEE*GEASWK
Trigger: CTTCCACGAGGCTTCCCCCCACTCCTCTGCTGCTAT...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCAGCCGTGTCCCTGTCTaGCCCAATTCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCSRVPV*PNSLAT
Trigger: GGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGAGCCGTGTCCCTGTCTaGCCCAATTCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALSRVPV*PNSLAT
Trigger: GGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCT...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCTCCGTCCTGCGGCTCTaGGTGCCATCCTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAISVLRL*VPSCSF
Trigger: AAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGA...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGCCCATTCATCTCCATaGAGCCCCGAGACCAGCACA +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALAHSSP*SPETST
Trigger: TGTGCTGGTCTCGGGGCTTCATGGAGATGAATGGGC...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGGAGACCAGGGGTCTCTaGACTTGCAGGGTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SWVRAAPSLRPAALGAILETRGL*TCRVRG
Trigger: ACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTC...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGGAGACCAGGGGTCTCTaGACTTGCAGGGTAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGETRGL*TCRVRG
Trigger: ACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTC...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCAGGTCTCTCTGGATaGCACCCAATGGCACATGGG +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHPGLSG*HPMAHG
Trigger: CCCATGTGCCATTGGGTGTCATCCAGAGAGACCTGG...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGCCATCCTGTTCCTTTaGGCTCAGTCAGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLAILFL*AQSASW
Trigger: CCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGGCCATCCTGTTCCTTTaGGCTCAGTCAGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFEAILFL*AQSASW
Trigger: CCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGC...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGTCCTGCGGCTCTGGGTaGCATCCTGTTCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALSCGSG*HPVPLS
Trigger: GCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGA...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTTCCTGCGGCTCTGGGTaGCATCCTGTTCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGSCGSG*HPVPLS
Trigger: GCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGA...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTGACCAGGAAGACGTaGATCCCGAGAAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCLTRKT*IPRKRR
Trigger: GCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAG...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCATAGCAGCAGAGGAGTaGGGGGAAGCCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCIAAEE*GEASWK
Trigger: CTTCCACGAGGCTTCCCCCCACTCCTCTGCTGCTAT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCCTCTGCTTTGTCAGCTaGAGTGAGCCGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGALCFVS*SEPCPC
Trigger: ACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAG...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCACTGGGGGCGCAATCTaGGGTGTCTTTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAITGGAI*GVFVAS
Trigger: TGAAGCGACAAAGACACCCCAGATTGCGCCCCCAGT...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGGAGGGAAAGAAGACTaGGCTGACTGGGGGCGCAAT +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLGGKED*ADWGRN
Trigger: ATTGCGCCCCCAGTCAGCCCAGTCTTCTTTCCCTCC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGGCTCAGTCAGCCTCCTaGGCTCGTCTCTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGAQSAS*ARLSVN
Trigger: ATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGC...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGGGAAGGCGGAGTCTTTaGGCATCCGCCCGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQGRRSL*ASARGE
Trigger: CTCACCCCGGGCGGATGCCCAAAGACTCCGCCTTCC...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp AAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCC +
Preference number: 4 (lower is better)
Translates to: KTWQMLGLLAEGSPGQSWLAARS*PGRRGS
Trigger: GGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAG...CCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCGAAGCCACCTTACTTaGTACACCGTGAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIRSHLT*YTVKGT
Trigger: CGTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCG...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATTCCCCTAGTTGGCGATaGACAGGACGAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHSPSWR*TGRSHL
Trigger: AAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGA...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCTGTGGGTAGGGACTaGGTTCCCTTGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGAVGRD*VPLVMS
Trigger: AGACATCACCAAGGGAACTCAGTCCCTACCCACAGC...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCGCCAGAGTTGCCAGTTaGACATCAGGAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIARVAS*TSGEGP
Trigger: TGGTCCTTCTCCTGATGTGCAACTGGCAACTCTGGC...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp TGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCGCCAGAGTTGCCAGTTaGACATCAGGAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: WVRAAPSLRPAALGAILFARVAS*TSGEGP
Trigger: TGGTCCTTCTCCTGATGTGCAACTGGCAACTCTGGC...GAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTAGCACCGCACACATaGTCCGCACTACGAATCTGC +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFELAPHT*SALRIC
Trigger: GCAGATTCGTAGTGCGGACCATGTGTGCGGTGCTAG...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCACTGGGGGCGCAATCTaGGGTGTCTTTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCTGGAI*GVFVAS
Trigger: TGAAGCGACAAAGACACCCCAGATTGCGCCCCCAGT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGCAGAGCTGGGAAACTTaGAGGCAGAGGCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLQSWET*RQRLWV
Trigger: TACCCACAGCCTCTGCCTCCAAGTTTCCCAGCTCTG...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377526.4
CDS-3UTR CCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCGGGCCCAGGAAGACTTaGCAAATGTTAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGAGPRKT*QMLGLL
Trigger: CAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCC...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATTCACCGGGCCAGAGCTaGGAAACTGAGGTGATCACA +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHSPGQS*ETEVIT
Trigger: TGTGATCACCTCAGTTTCCCAGCTCTGGCCCGGTGA...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
3UTR CAA 72 bp GCCGGGCCCAGGAAGACTTGGCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGCCAGAGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: AGPRKTWQMLGL*AEGSPGQSWET
Trigger: AGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTCGAAGCCACCTTACTTaGTACACCGTGAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGRSHLT*YTVKGT
Trigger: CGTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCG...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGGGGGCAAAACTTCCTTaGCTCTCTGAGCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFEGAKLP*LSEPEL
Trigger: CAACTCTGGCTCAGAGAGTCAAGGAAGTTTTGCCCC...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGGGGCAAAACTTCCTTaGCTCTCTGAGCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLGAKLP*LSEPEL
Trigger: CAACTCTGGCTCAGAGAGTCAAGGAAGTTTTGCCCC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGGGGAAGCTCCATAACTaGTGCTTCAGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQGKLHN*CFRSAR
Trigger: CCGGGCGCTCCTGAAGCAGCAGTTATGGAGCTTCCC...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp CCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCAGTCCGGAGTCCTCCTaGCGGGCCACGAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PLSSVSLLGSSLCESPSCSPESS*RATSPS
Trigger: GCTAGGGCTCGTGGCCCGGCAGGAGGACTCCGGACT...GCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCTCGCTTCATGTGCTCTaGTTTGTCAGCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAISLHVL*FVSWSE
Trigger: CTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGA...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGGAGGCAGAACCCGACTaGCGCGTAGAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KTWQMLGLLAEGSPGQSWEAEPD*RVEQQH
Trigger: GTGCTGCTGCTCTACGCGCCAGTCGGGTTCTGCCTC...CCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGTCTGGCCCAATTCCTTaGCCACCAGCTGTTGTACAC +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLSGPIP*PPAVVH
Trigger: GTGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGA...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTTCTGGCCCAATTCCTTaGCCACCAGCTGTTGTACAC +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGSGPIP*PPAVVH
Trigger: GTGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGA...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGTTGGCCAGGTCTCTCTaGATGACACCCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFELARSL*MTPNGT
Trigger: TGTGCCATTGGGTGTCATCCAGAGAGACCTGGCCAA...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGGGGCCCAGGAAGACTTaGCAAATGTTAGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLGPRKT*QMLGLL
Trigger: CAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCC...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
3UTR CAA 72 bp TCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTaGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPSCGSGCHPVP*SSVSLLGSSLC
Trigger: ACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCCAGAGCTGGGAAACTaGGGTGATCACAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFEPELGN*GDHNVR
Trigger: TCTGACATTGTGATCACCTCAGTTTCCCAGCTCTGG...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp AAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGAAGCTCCATAACTGCTaGTTCAGGAGCGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KTWQMLGLLAEGSPGQSWKLHNC*FRSARP
Trigger: CGGCCGGGCGCTCCTGAAGCAGCAGTTATGGAGCTT...CCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCCTGTTGTACACGGAGTaGAAACTCCTCATTCGCTTC +
Preference number: 4 (lower is better)
Translates to: VVSWVRAAPSLRPAALGALLYTE*KLLIRF
Trigger: GAAGCGAATGAGGAGTTTGCACTCCGTGTACAACAG...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCTCGCTTCATGTGCTCTaGTTTGTCAGCTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCSLHVL*FVSWSE
Trigger: CTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGA...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTATTCATATAGTGCTTaGTTGCGCTCCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGYSYSA*LRSCRL
Trigger: GAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATA...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTCGAAAGGTGTCACATaGTTGGAAATGAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: SWVRAAPSLRPAALGAILSKGVT*LEMRTL
Trigger: CAGGGTCCTCATTTCCAACCATGTGACACCTTTCGA...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTCTGGATGACACCCAATaGCACATGGGGCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGLDDTQ*HMGQNF
Trigger: GAAGTTTTGCCCCATGTGCCATTGGGTGTCATCCAG...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCTTACTTGATACACCGTaGAAGGGACGAAAAGTGACC +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAILLDTP*KGRKVT
Trigger: GGTCACTTTTCGTCCCTTTCACGGTGTATCAAGTAA...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCTGTTGTACACGGAGTaGAAACTCCTCATTCGCTTC +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHLLYTE*KLLIRF
Trigger: GAAGCGAATGAGGAGTTTGCACTCCGTGTACAACAG...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATTATTCATATAGTGCTTaGTTGCGCTCCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHYSYSA*LRSCRL
Trigger: GAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATA...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTCTAGCACCGCACACATaGTCCGCACTACGAATCTGC +
Preference number: 4 (lower is better)
Translates to: VSVLRLWVPSCSFELSQPLAPHT*SALRIC
Trigger: GCAGATTCGTAGTGCGGACCATGTGTGCGGTGCTAG...AGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGCTCTGCTTTGTCAGCTaGAGTGAGCCGTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQLCFVS*SEPCPC
Trigger: ACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAG...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGACGCATCGAATGCCTTaGAGGCAGAGGCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQTHRMP*RQRLWV
Trigger: TACCCACAGCCTCTGCCTCCAAGGCATTCGATGCGT...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp AAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGTCCCCTAGTTGGCGATaGACAGGACGAAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: KTWQMLGLLAEGSPGQSWSPSWR*TGRSHL
Trigger: AAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGA...CCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTACCATGAATTTAATGTaGCATTGGGGGAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGTMNLM*HWGSLI
Trigger: GATGAGGCTCCCCCAATGTCACATTAAATTCATGGT...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCACCATGAATTTAATGTaGCATTGGGGGAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCTMNLM*HWGSLI
Trigger: GATGAGGCTCCCCCAATGTCACATTAAATTCATGGT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCGGTTGTACCACATCTTaGATAGAAAATGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIGCTTS*IENGQE
Trigger: TTCCTGGCCATTTTCTATCCAAGATGTGGTACAACC...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGTTGGCCAGGTCTCTCTaGATGACACCCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQLARSL*MTPNGT
Trigger: TGTGCCATTGGGTGTCATCCAGAGAGACCTGGCCAA...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCAATGTCAGAGGGCTTaGGGAGTCATCATCATTAAA +
Preference number: 4 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHQCQRA*GVIIIK
Trigger: TTTAATGATGATGACTCCGCAAGCCCTCTGACATTG...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAAATTGACTATGTTGTaGTCGAAAGGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLKLTML*SKGVTW
Trigger: CCATGTGACACCTTTCGACCACAACATAGTCAATTT...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCAAATTGACTATGTTGTaGTCGAAAGGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCKLTML*SKGVTW
Trigger: CCATGTGACACCTTTCGACCACAACATAGTCAATTT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCGTATTCATCCGTCCTGCGGCTCTaGGTGCCATCCTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AQSASWARLSVNLLLAYSSVLRL*VPSCSF
Trigger: AAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGA...TGAATACGCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp ATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCTGACCCAGGAGGCATCTaGCACCGTCACAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: ISFLRIHIVLACAPAGSPDPGGI*HRHRDQ
Trigger: CTGGTCTCTGTGACGGTGTCAGATGCCTCCTGGGTC...AGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp GCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCGTATTCAGCTCAGTCAGCCTCCTaGGCTCGTCTCTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: AQSASWARLSVNLLLAYSAQSAS*ARLSVN
Trigger: ATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGC...TGAATACGCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp ATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCTCAGCCTGTTGTGAGTTaGGTGAGGGCTGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ISFLRIHIVLACAPAGSPQPVVS*VRAAPS
Trigger: ACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG...AGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp AATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCGGAGGGAAAGAAGACTaGGCTGACTGGGGGCGCAAT +
Preference number: 4 (lower is better)
Translates to: NLLLAYSYSACLRSCRLSGGKED*ADWGRN
Trigger: ATTGCGCCCCCAGTCAGCCCAGTCTTCTTTCCCTCC...GGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp ATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCTGCTGTGGGTAGGGACTaGGTTCCCTTGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: ISFLRIHIVLACAPAGSPAVGRD*VPLVMS
Trigger: AGACATCACCAAGGGAACTCAGTCCCTACCCACAGC...AGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGCCCCTCCCGGCCATTaGTGGCCTCTTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFAPPGH*WPLPQG
Trigger: TCCCTGAGGAAGAGGCCACCAATGGCCGGGAGGGGC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGAGGCAGAACCCGACTaGCGCGTAGAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFEAEPD*RVEQQH
Trigger: GTGCTGCTGCTCTACGCGCCAGTCGGGTTCTGCCTC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp GTGAATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCGAAAGGTGTCACATaGTTGGAAATGAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: VNLLLAYSYSACLRSCRLSKGVT*LEMRTL
Trigger: CAGGGTCCTCATTTCCAACCATGTGACACCTTTCGA...GAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR GCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGGGAAGCTCCATAACTaGTGCTTCAGGAGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFGKLHN*CFRSAR
Trigger: CCGGGCGCTCCTGAAGCAGCAGTTATGGAGCTTCCC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGAAGACTGGGCTGACTaGGGGCGCAATCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFEDWAD*GRNLGC
Trigger: ACACCCCAGATTGCGCCCCCAGTCAGCCCAGTCTTC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTCTGACCAGGAAGACGTaGATCCCGAGAAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFLTRKT*IPRKRR
Trigger: GCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAG...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGCTGGGAAACTGAGGTaGTCACAATGTCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFAGKLR*SQCQRA
Trigger: AGCCCTCTGACATTGTGATCACCTCAGTTTCCCAGC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR TCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGGGCTCGTCTCTCTGTaGATCTCCTTCTTGCGTATT +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFGLVSL*ISFLRI
Trigger: AATACGCAAGAAGGAGATTCACAGAGAGACGAGCCC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR GCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTCTTTGTCGCTTCATGTaGTCTGCTTTGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFLCRFM*SALSAG
Trigger: TCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAG...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR TCA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTTTACTTGATACACCGTaGAAGGGACGAAAAGTGACC +
Preference number: 4 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFLLDTP*KGRKVT
Trigger: GGTCACTTTTCGTCCCTTTCACGGTGTATCAAGTAA...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS TCA 90 bp ACCCGGAAGCCGGTGCGAGTCAAAGAGCCGCTCCGGCCCCGGCCCTaGGGGAAGCTCCATAACTGCTGCTTCAGGAGCGCCCGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: TRKPVRVKEPLRPRP*GKLHNCCFRSARPS
Trigger: CGACGGCCGGGCGCTCCTGAAGCAGCAGTTATGGAGCTTCCCTCAGGGCCGGGGCCGGAGCGGCTCTTTGACTCGCACCGGCTTCCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCAGCCCCTCCCGGCCATaGGTGGCCTCTTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VSWVRAAPSLRPAALGAISPSRP*VASSSG
Trigger: CCCTGAGGAAGAGGCCACCAATGGCCGGGAGGGGCT...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCCCCTCCCGGCCATaGGTGGCCTCTTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLSPSRP*VASSSG
Trigger: CCCTGAGGAAGAGGCCACCAATGGCCGGGAGGGGCT...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS TCA 90 bp GCCCGCGTCGGAACCTGCGAAGGACGCTGTCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCCCGAGAAAGAGGCGCAGGACGAGGA +
Preference number: 5 (lower is better)
Translates to: ARVGTCEGRCLAARS*PGRRGSRERGAGRG
Trigger: TCCTCGTCCTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGGTTCCGACGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS TCA 90 bp GACACAGGAGGTGGTGACTGTGTGGCCTCGGGCCAGACCCAGCTCTaGCACTCCCCGAACGCCCGCGTCGGAACCTGCGAAGGACGCTGT +
Preference number: 5 (lower is better)
Translates to: DTGGGDCVASGQTQL*HSPNARVGTCEGRC
Trigger: ACAGCGTCCTTCGCAGGTTCCGACGCGGGCGTTCGGGGAGTGTCAGAGCTGGGTCTGGCCCGAGGCCACACAGTCACCACCTCCTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS-3UTR CAA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTCCAGCCTGTTGTGAGTaGGGTGAGGGCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGPACCE*GEGCPQ
Trigger: CTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGG...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGCCAGCCTGTTGTGAGTaGGGTGAGGGCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLPACCE*GEGCPQ
Trigger: CTGGGGGCAGCCCTCACCCAACTCACAACAGGCTGG...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS CCA 90 bp GACACTCCCCGAACGCCCGCGTCGGAACCTGCGAAGGACGCTGTCTaGCAGCGCGCAGCTGACCAGGAAGACGTGGATCCCGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: DTPRTPASEPAKDAV*QRAADQEDVDPEKE
Trigger: CTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGGTTCCGACGCGGGCGTTCGGGGAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CCA 90 bp ATGGTCCGCACTACGAATCTGGGGACACAGGAGGTGGTGACTGTGTaGCCTCGGGCCAGACCCAGCTCTGACACTCCCCGAACGCCCGCG +
Preference number: 5 (lower is better)
Translates to: MVRTTNLGTQEVVTV*PRARPSSDTPRTPA
Trigger: CGCGGGCGTTCGGGGAGTGTCAGAGCTGGGTCTGGCCCGAGGCCACACAGTCACCACCTCCTGTGTCCCCAGATTCGTAGTGCGGACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CCA 90 bp CTGCGAAGGACGCTGTCTGGCAGCGCGCAGCTGACCAGGAAGACGTaGATCCCGAGAAAGAGGCGCAGGACGAGGAGGCAGAACCCGACT +
Preference number: 5 (lower is better)
Translates to: LRRTLSGSAQLTRKT*IPRKRRRTRRQNPT
Trigger: AGTCGGGTTCTGCCTCCTCGTCCTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS-3UTR CAA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGC +
Preference number: 5 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGQMLGL*AEGSPG
Trigger: GCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTG...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGCTTGGCCACCAGCTGTaGTACACGGAGTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: SWVRAAPSLRPAALGAILLGHQL*YTECKL
Trigger: GAGTTTGCACTCCGTGTACAACAGCTGGTGGCCAAG...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCCGGGCCCAGGAAGACTaGGCAAATGTTAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VVSWVRAAPSLRPAALGARAQED*ANVRAV
Trigger: AACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCG...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTGCCATCCTGTTCCTTaGAGCTCAGTCAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VVSWVRAAPSLRPAALGACHPVP*SSVSLL
Trigger: CAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCA...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp AAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGCGGCCGCAGGGGCTCTaGGGAAGGCGGAGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KTWQMLGLLAEGSPGQSWRPQGL*GRRSLW
Trigger: CCAAAGACTCCGCCTTCCCAAGAGCCCCTGCGGCCG...CCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS TCA 90 bp TCCGCACTACGAATCTGCGAAGGACGCTGTCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCCCGAGAAAGAGGCGCAGGACGAGGA +
Preference number: 5 (lower is better)
Translates to: SALRICEGRCLAARS*PGRRGSRERGAGRG
Trigger: TCCTCGTCCTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGATTCGTAGTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS TCA 90 bp TCCTGCCGGGCCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTaGGGGGTCACCGGGCCAGAGCTGGGAAACTTGGAGGCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SCRAQEDLANVRAVG*GVTGPELGNLEAEA
Trigger: AGCCTCTGCCTCCAAGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000463900.5
CDS-3UTR CAA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCAGGGGTCTCTGAACTaGCAGGGTAAGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIQGSLN*QGKRLY
Trigger: GTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTG...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGCAGGGGTCTCTGAACTaGCAGGGTAAGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGQGSLN*QGKRLY
Trigger: GTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTG...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTTGGCCACCAGCTGTaGTACACGGAGTGCAAACTC +
Preference number: 5 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCLGHQL*YTECKL
Trigger: GAGTTTGCACTCCGTGTACAACAGCTGGTGGCCAAG...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCAATCTGGGGTGTCTTaGTCGCTTCATGTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VSWVRAAPSLRPAALGAIQSGVS*SLHVLC
Trigger: GCAGAGCACATGAAGCGACAAAGACACCCCAGATTG...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTAGCCAGAGTTGCCAGTaGCACATCAGGAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGSQSCQ*HIRRRT
Trigger: GGTCCTTCTCCTGATGTGCAACTGGCAACTCTGGCT...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGCTCTCTGAGCCAGAGTaGCCAGTTGCACATCAGGAG +
Preference number: 5 (lower is better)
Translates to: EGCPQSPSCGSGCHPVPLLSEPE*PVAHQE
Trigger: CTCCTGATGTGCAACTGGCAACTCTGGCTCAGAGAG...CAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCTCTCTGAGCCAGAGTaGCCAGTTGCACATCAGGAG +
Preference number: 5 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCLSEPE*PVAHQE
Trigger: CTCCTGATGTGCAACTGGCAACTCTGGCTCAGAGAG...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATTCTACACAGCCAGTCTaGGCCAGGTCTCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHSTQPV*ARSLWM
Trigger: CATCCAGAGAGACCTGGCCAAGACTGGCTGTGTAGA...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCGGGCCCAGGAAGACTaGGCAAATGTTAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHRAQED*ANVRAV
Trigger: AACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCG...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGTCATATAGTGCTTGCTaGCGCTCCTGCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFESYSAC*RSCRLS
Trigger: GGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGA...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGTCATATAGTGCTTGCTaGCGCTCCTGCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALSYSAC*RSCRLS
Trigger: GGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGA...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGTGCCATCCTGTTCCTTaGAGCTCAGTCAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFECHPVP*SSVSLL
Trigger: CAGGAGGCTGACTGAGCTCAAAGGAACAGGATGGCA...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS TCA 90 bp TGGTCGAAAGGTGTCACATGGTTGGAAATGAGGACCCTGACACTGTaGTCCCGGAGTCCGGAGTCCTCCTGCCGGGCCACGAGCCCTAGC +
Preference number: 5 (lower is better)
Translates to: WSKGVTWLEMRTLTL*SRSPESSCRATSPS
Trigger: GCTAGGGCTCGTGGCCCGGCAGGAGGACTCCGGACTCCGGGATCACAGTGTCAGGGTCCTCATTTCCAACCATGTGACACCTTTCGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS GCA 90 bp TGGGCTGACTGGGGGCGCAATCTGGGGTGTCTTTGTCGCTTCATGTaGTCTGCTTTGTCAGCTGGAGTGAGCCGTGTCCCTGTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: WADWGRNLGCLCRFM*SALSAGVSRVPVWP
Trigger: GGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCAGATTGCGCCCCCAGTCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000486234.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCACGAAGCCACCTTACTaGATACACCGTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: VSWVRAAPSLRPAALGAITKPPY*IHRERD
Trigger: GTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCGT...GATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTTTCATGTGCTCTGCTTaGTCAGCTGGAGTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: PVVSWVRAAPSLRPAALGFMCSA*SAGVSR
Trigger: ACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAA...ACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGC +
Preference number: 5 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQQMLGL*AEGSPG
Trigger: GCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTG...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CAA 90 bp GTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCAAAGGTGTCACATGGTaGGAAATGAGGACCCTGACA +
Preference number: 5 (lower is better)
Translates to: VVSWVRAAPSLRPAALGAKGVTW*EMRTLT
Trigger: TGTCAGGGTCCTCATTTCCAACCATGTGACACCTTT...GGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATGAAGCACAGAATCTCTaGAGTGACTCCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: CELGEGCPQSPSCGSGCHEAQNL*SDSTNS
Trigger: GGAGTTGGTGGAGTCACTCAAGAGATTCTGTGCTTC...ATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGGAATTTAATGTGACATaGGGGGAGCCTCATCCTTCC +
Preference number: 5 (lower is better)
Translates to: ACCELGEGCPQSPSCGSGEFNVT*GEPHPS
Trigger: GGAAGGATGAGGCTCCCCCAATGTCACATTAAATTC...CCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp TGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCAAAGGTGTCACATGGTaGGAAATGAGGACCCTGACA +
Preference number: 5 (lower is better)
Translates to: CCELGEGCPQSPSCGSGCKGVTW*EMRTLT
Trigger: TGTCAGGGTCCTCATTTCCAACCATGTGACACCTTT...GCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTGTCTGGCCCAATTCCTaGGCCACCAGCTGTTGTACA +
Preference number: 5 (lower is better)
Translates to: VSVLRLWVPSCSFELSQPVWPNS*ATSCCT
Trigger: TGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGAC...AGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CAA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCCAGAGTTGCCAGTaGCACATCAGGAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQSQSCQ*HIRRRT
Trigger: GGTCCTTCTCCTGATGTGCAACTGGCAACTCTGGCT...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CAA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGAATTTAATGTGACATaGGGGGAGCCTCATCCTTCC +
Preference number: 5 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALEFNVT*GEPHPS
Trigger: GGAAGGATGAGGCTCCCCCAATGTCACATTAAATTC...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS TCA 90 bp TGGGGTGTCTTTGTCGCTTCATGTGCTCTGCTTTGTCAGCTGGAGTaGGCCGTGTCCCTGTCTGGCCCAATTCCTTGGCCACCAGCTAGG +
Preference number: 5 (lower is better)
Translates to: WGVFVASCALLCQLE*AVSLSGPIPWPPAR
Trigger: CCTAGCTGGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS-3UTR CAA 90 bp AGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: SWVRAAPSLRPAALGAILSKLTM*WSKGVT
Trigger: TGTGACACCTTTCGACCACAACATAGTCAATTTGCT...CAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGTTGCAGGGTAAGAGGTaGTACCACATCTTGGATAGA +
Preference number: 5 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALLQGKR*YHILDR
Trigger: TCTATCCAAGATGTGGTACAACCTCTTACCCTGCAA...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGTTGCAGGGTAAGAGGTaGTACCACATCTTGGATAGA +
Preference number: 5 (lower is better)
Translates to: GLPPVSVLRLWVPSCSFELQGKR*YHILDR
Trigger: TCTATCCAAGATGTGGTACAACCTCTTACCCTGCAA...CTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGACTGGGGGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp GTCTCCGTCCTGCGGCTCTGGGTGCCATCCTGTTCCTTTGAGCTCAGTCAGCCTCAATCTGGGGTGTCTTaGTCGCTTCATGTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VSVLRLWVPSCSFELSQPQSGVS*SLHVLC
Trigger: GCAGAGCACATGAAGCGACAAAGACACCCCAGATTG...AGGCTGACTGAGCTCAAAGGAACAGGATGGCACCCAGAGCCGCAGGACGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS-3UTR CAA 90 bp CCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCCACGCATCGAATGCCTaGGAGGCAGAGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PLSSVSLLGSSLCESPSCHASNA*EAEAVG
Trigger: ACCCACAGCCTCTGCCTCCAAGGCATTCGATGCGTG...GCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS TCA 90 bp TGGGGTGTCTTTGTCGCTTCATGTGCTCTGCTTTGTCAGCTGGAGTaGGCCGTGTCCCTGTCTGGCCCAATTCCTTGGCCACCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: WGVFVASCALLCQLE*AVSLSGPIPWPPAV
Trigger: AACAGCTGGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS TCA 90 bp AAACACGCATCGAATGCCTTGGAGGCAGAGGCTGTGGGTAGGGACTaGGTTCCCTTGGTGATGTCTTCAGGCATGAAAGCTACGGCCCCC +
Preference number: 5 (lower is better)
Translates to: KHASNALEAEAVGRD*VPLVMSSGMKATAP
Trigger: GGGGGCCGTAGCTTTCATGCCTGAAGACATCACCAAGGGAACTCAGTCCCTACCCACAGCCTCTGCCTCCAAGGCATTCGATGCGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000425118.5
ENST00000462297.1
ENST00000466894.5
CDS CCA 90 bp CAATCTGGGGTGTCTTTGTCGCTTCATGTGCTCTGCTTTGTCAGCTaGAGTGAGCCGTGTCCCTGTCTGGCCCAATTCCTTGGCCACCAG +
Preference number: 5 (lower is better)
Translates to: QSGVSLSLHVLCFVS*SEPCPCLAQFLGHQ
Trigger: CTGGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
ENST00000486234.1
CDS-3UTR CAA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALSKLTM*WSKGVT
Trigger: TGTGACACCTTTCGACCACAACATAGTCAATTTGCT...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CAGCCTGTTGTGAGTTGGGTGAGGGCTGCCCCCAGTCTCCGTCCTGCGGCTCTGCAGGTGGTAAGCAAATaGACTATGTTGTGGTCGAAA +
Preference number: 5 (lower is better)
Translates to: QPVVSWVRAAPSLRPAALQVVSK*TMLWSK
Trigger: TTTCGACCACAACATAGTCAATTTGCTTACCACCTG...CAGAGCCGCAGGACGGAGACTGGGGGCAGCCCTCACCCAACTCACAACAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp CCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTGAGGGGTCACCGGGCCAGGAAGCACAGAATCTCTaGAGTGACTCCACCAACTCC +
Preference number: 5 (lower is better)
Translates to: PRKTWQMLGLLAEGSPGQEAQNL*SDSTNS
Trigger: GGAGTTGGTGGAGTCACTCAAGAGATTCTGTGCTTC...CTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS TCA 90 bp GGCTGTTGGCTGAGGGGTCACCGGGCCAGAGCTGGGAAACTGAGGTaGTCACAATGTCAGAGGGCTTGCGGAGTCATCATCATTAAACAC +
Preference number: 5 (lower is better)
Translates to: GCWLRGHRARAGKLR*SQCQRACGVIIIKH
Trigger: GTGTTTAATGATGATGACTCCGCAAGCCCTCTGACATTGTGATCACCTCAGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425118.5
ENST00000466894.5
ENST00000486234.1
CDS-3UTR CAA 90 bp CCTTTGAGCTCAGTCAGCCTCCTGGGCTCGTCTCTCTGTGAATCTCCTTCTTGCTCTACACAGCCAGTCTaGGCCAGGTCTCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: PLSSVSLLGSSLCESPSCSTQPV*ARSLWM
Trigger: CATCCAGAGAGACCTGGCCAAGACTGGCTGTGTAGA...GCAAGAAGGAGATTCACAGAGAGACGAGCCCAGGAGGCTGACTGAGCTCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS GCA 90 bp CCTCATTCGCTTCCCCTAGTTGGCGATGAACAGGACGAAGCCACCTaGAAAGAAACAATCCAGGGCTATGTTGTGGGCACCCAGGGTAGA +
Preference number: 5 (lower is better)
Translates to: PHSLPLVGDEQDEAT*KETIQGYVVGTQGR
Trigger: TCTACCCTGGGTGCCCACAACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGAAGCGAATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CCA 90 bp AACAGGACGAAGCCACCTGCAAAGAAACAATCCAGGGCTATGTTGTaGGCACCCAGGGTAGAGGCTGTCACCATTCCCCACTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: NRTKPPAKKQSRAML*APRVEAVTIPHFGT
Trigger: GGTACCAAAGTGGGGAATGGTGACAGCCTCTACCCTGGGTGCCCACAACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CCA 90 bp GTGTCCCTGTCTGGCCCAATTCCTTGGCCACCAGCTAGGGAGAATTaGAAGACTGGAAGTGTCAAGATCTCAAGCTTTCCTCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VSLSGPIPWPPAREN*KTGSVKISSFPPSP
Trigger: AGGAGAGGGAGGAAAGCTTGAGATCTTGACACTTCCAGTCTTCCAATTCTCCCTAGCTGGTGGCCAAGGAATTGGGCCAGACAGGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS TCA 90 bp TGTACACGGAGTGCAAACTCCTCATTCGCTTCCCCTAGTTGGCGATaGACAGGACGAAGCCACCTGCAAAGAAACAATCCAGGGCTATGT +
Preference number: 5 (lower is better)
Translates to: CTRSANSSFASPSWR*TGRSHLQRNNPGLC
Trigger: ACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGAAGCGAATGAGGAGTTTGCACTCCGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS-3UTR CAA 90 bp ATCTCCTTCTTGCGTATTCATATAGTGCTTGCTTGCGCTCCTGCAGGCTCTCCTTTCATGTGCTCTGCTTaGTCAGCTGGAGTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: ISFLRIHIVLACAPAGSPFMCSA*SAGVSR
Trigger: ACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAA...AGGAGAGCCTGCAGGAGCGCAAGCAAGCACTATATGAATACGCAAGAAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425118.5
CDS CCA 90 bp CTCTCACTCACGGTGCTACAGGTGGTAAGCAAATTGACTATGTTGTaGTCGAAAGGTGTCACATGGTTGGAAATGAGGACCCTGACACTG +
Preference number: 5 (lower is better)
Translates to: LSLTVLQVVSKLTML*SKGVTWLEMRTLTL
Trigger: CAGTGTCAGGGTCCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCGTGAGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463900.5
ENST00000466894.5
CDS CCA 90 bp TTGAGTAGAGGGGTGCTACAGGTGGTAAGCAAATTGACTATGTTGTaGTCGAAAGGTGTCACATGGTTGGAAATGAGGACCCTGACACTG +
Preference number: 5 (lower is better)
Translates to: LSRGVLQVVSKLTML*SKGVTWLEMRTLTL
Trigger: CAGTGTCAGGGTCCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCCCTCTACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000472800.1
CDS CCA 90 bp CTCAAGCAGATTAGTGATAGTCAAGTCTACACAGCCAGTCTTGGCTaGGGAGAAAAGAGAAGGGAGTCCACTCCCTACTTACTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LKQISDSQVYTASLG*GEKRRESTPYLLSS
Trigger: GGAAGAAAGTAAGTAGGGAGTGGACTCCCTTCTCTTTTCTCCCCAGCCAAGACTGGCTGTGTAGACTTGACTATCACTAATCTGCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462297.1
CDS-3UTR CAA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTGTCTGGCCCAATTCCTaGGCCACCAGCTGTTGTACA +
Preference number: 5 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFVWPNS*ATSCCT
Trigger: TGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGAC...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS-3UTR CAA 90 bp AATGAAAACCATGAATTTAATGTGACATTGGGGGAGCCTCATCCTTCCCTTTTTACGAAGCCACCTTACTaGATACACCGTGAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: NENHEFNVTLGEPHPSLFTKPPY*IHRERD
Trigger: GTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCGT...AAAAAGGGAAGGATGAGGCTCCCCCAATGTCACATTAAATTCATGGTTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000425118.5
CDS TCA 72 bp CCGGTGCGAGTCAAAGAGCCGCTCCGGCCCCGGCCCTaGGGGAAGCTCCATAACTGCTGCTTCAGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: PVRVKEPLRPRP*GKLHNCCFRSA
Trigger: GGCGCTCCTGAAGCAGCAGTTATGGAGCTTCCCTCAGGGCCGGGGCCGGAGCGGCTCTTTGACTCGCACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS TCA 72 bp GGTGGTGACTGTGTGGCCTCGGGCCAGACCCAGCTCTaGCACTCCCCGAACGCCCGCGTCGGAACCTGCGAA +
Preference number: 6 (lower is better)
Translates to: GGDCVASGQTQL*HSPNARVGTCE
Trigger: TTCGCAGGTTCCGACGCGGGCGTTCGGGGAGTGTCAGAGCTGGGTCTGGCCCGAGGCCACACAGTCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CCA 72 bp CGAACGCCCGCGTCGGAACCTGCGAAGGACGCTGTCTaGCAGCGCGCAGCTGACCAGGAAGACGTGGATCCC +
Preference number: 6 (lower is better)
Translates to: RTPASEPAKDAV*QRAADQEDVDP
Trigger: GGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGGTTCCGACGCGGGCGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CCA 72 bp CCTCCTGCCGGGCCACGAGCCCTAGCACCGCACACATaGTCCGCACTACGAATCTGGGGACACAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PPAGPRALAPHT*SALRIWGHRRW
Trigger: CCACCTCCTGTGTCCCCAGATTCGTAGTGCGGACCATGTGTGCGGTGCTAGGGCTCGTGGCCCGGCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CCA 72 bp ACGCTGTCTGGCAGCGCGCAGCTGACCAGGAAGACGTaGATCCCGAGAAAGAGGCGCAGGACGAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: TLSGSAQLTRKT*IPRKRRRTRRQ
Trigger: CTGCCTCCTCGTCCTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS CCA 72 bp CCTCCTGCCGGGCCACGAGCCCTAGCACCGCACACATaGTCCGCACTACGAATCTGCGAAGGACGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PPAGPRALAPHT*SALRICEGRCL
Trigger: CAGACAGCGTCCTTCGCAGATTCGTAGTGCGGACCATGTGTGCGGTGCTAGGGCTCGTGGCCCGGCAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS TCA 72 bp GGAACCTGCGAAGGACGCTGTCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCCCGAGAAAGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: GTCEGRCLAARS*PGRRGSRERGA
Trigger: TGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472800.1
CDS CAA 90 bp GGCTCTCCTGCCGGGCCCAGGAAGACTTGGCAAATGTTAGGGCTGTaGGCTGAGGGGTCACCGGGCCAGAGCTGGGAAACTTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GSPAGPRKTWQMLGL*AEGSPGQSWETWRQ
Trigger: CTGCCTCCAAGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGGCAGGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000463900.5
CDS TCA 72 bp CGAATCTGCGAAGGACGCTGTCTGGCAGCGCGCAGCTaGCCAGGAAGACGTGGATCCCGAGAAAGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: RICEGRCLAARS*PGRRGSRERGA
Trigger: TGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGATTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS TCA 72 bp GGTGTCACATGGTTGGAAATGAGGACCCTGACACTGTaGTCCCGGAGTCCGGAGTCCTCCTGCCGGGCCACG +
Preference number: 6 (lower is better)
Translates to: GVTWLEMRTLTL*SRSPESSCRAT
Trigger: CGTGGCCCGGCAGGAGGACTCCGGACTCCGGGATCACAGTGTCAGGGTCCTCATTTCCAACCATGTGACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000472800.1
CDS CCA 72 bp CATGGTCCGCACTACGAATCTGCGAAGGACGCTGTCTaGCAGCGCGCAGCTGACCAGGAAGACGTGGATCCC +
Preference number: 6 (lower is better)
Translates to: HGPHYESAKDAV*QRAADQEDVDP
Trigger: GGGATCCACGTCTTCCTGGTCAGCTGCGCGCTGCCAGACAGCGTCCTTCGCAGATTCGTAGTGCGGACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS CAA 72 bp CCCCGCCTCCACCCTGTCTGTGCACCCGACCACCTGTaGTACACGGAGTGCAAACTCCTCATTCGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PRLHPVCAPDHL*YTECKLLIRFP
Trigger: GGGGAAGCGAATGAGGAGTTTGCACTCCGTGTACAACAGGTGGTCGGGTGCACAGACAGGGTGGAGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS TCA 72 bp GCCCAGGAAGACTTGGCAAATGTTAGGGCTGTTGGCTaGGGGGTCACCGGGCCAGAGCTGGGAAACTTGGAG +
Preference number: 6 (lower is better)
Translates to: AQEDLANVRAVG*GVTGPELGNLE
Trigger: CTCCAAGTTTCCCAGCTCTGGCCCGGTGACCCCTCAGCCAACAGCCCTAACATTTGCCAAGTCTTCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377526.4
ENST00000463900.5
CDS CAA 90 bp TGGGGGCGCAATCTGGGGTGTCTTTGTCGCTTCATGTGCTCTGCTTaGTCAGCTGGAGTGAGCCGTGTCCCTGTCTGGCCCAATTCCTTG +
Preference number: 6 (lower is better)
Translates to: WGRNLGCLCRFMCSA*SAGVSRVPVWPNSL
Trigger: CAAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCAGATTGCGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
ENST00000486234.1
CDS TCA 72 bp CATAGCCTGCCCCCAACTCACCCCAACACTTGGATCTaGCCATTTCCTGGGTCTCACCTTGGAGGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: HSLPPTHPNTWI*PFPGSHLGGRG
Trigger: GCCTCTGCCTCCAAGGTGAGACCCAGGAAATGGTCAGATCCAAGTGTTGGGGTGAGTTGGGGGCAGGCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486234.1
CDS GCA 72 bp TGGGGGCGCAATCTGGGGTGTCTTTGTCGCTTCATGTaGTCTGCTTTGTCAGCTGGAGTGAGCCGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: WGRNLGCLCRFM*SALSAGVSRVP
Trigger: AGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACACCCCAGATTGCGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
ENST00000486234.1
CDS CCA 72 bp TCTGCTTTGTCAGCTGGAGTGAGCCGTGTCCCTGTCTaGCCCAATTCCTTGGCCACCAGCTGTTGTACACGG +
Preference number: 6 (lower is better)
Translates to: SALSAGVSRVPV*PNSLATSCCTR
Trigger: CCGTGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
CDS TCA 72 bp GACAGGGCAGAGGCCACTAATTCCTTGACCTTGAGGTaGGCCTCTCCCCAGCGACCAAAATGTGAGGACAGT +
Preference number: 6 (lower is better)
Translates to: DRAEATNSLTLR*ASPQRPKCEDS
Trigger: ACTGTCCTCACATTTTGGTCGCTGGGGAGAGGCTCACCTCAAGGTCAAGGAATTAGTGGCCTCTGCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464887.1
CDS CCA 72 bp GAGGGAAAGAAGACTGGGCTGACTGGGGGCGCAATCTaGGGTGTCTTTGTCGCTTCATGTGCTCTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: EGKKTGLTGGAI*GVFVASCALLC
Trigger: ACAAAGCAGAGCACATGAAGCGACAAAGACACCCCAGATTGCGCCCCCAGTCAGCCCAGTCTTCTTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000466894.5
ENST00000486234.1
CDS CCA 72 bp AAGCCACCTGCAAAGAAACAATCCAGGGCTATGTTGTaGGCACCCAGGGTAGAGGCTGTCACCATTCCCCAC +
Preference number: 6 (lower is better)
Translates to: KPPAKKQSRAML*APRVEAVTIPH
Trigger: GTGGGGAATGGTGACAGCCTCTACCCTGGGTGCCCACAACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS TCA 72 bp GAGGCATCTGACACCGTCACAGAGACCAGGGGTCTCTaGACTTGCAGGGTAAGAGGTTGTACCACATCTTGG +
Preference number: 6 (lower is better)
Translates to: EASDTVTETRGL*TCRVRGCTTSW
Trigger: CCAAGATGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTCTGTGACGGTGTCAGATGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
CDS GCA 72 bp CTTCCCCTAGTTGGCGATGAACAGGACGAAGCCACCTaGAAAGAAACAATCCAGGGCTATGTTGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: LPLVGDEQDEAT*KETIQGYVVGT
Trigger: GGTGCCCACAACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CCA 72 bp GTGTCTTTGTCGCTTCATGTGCTCTGCTTTGTCAGCTaGAGTGAGCCGTGTCCCTGTCTGGCCCAATTCCTT +
Preference number: 6 (lower is better)
Translates to: VSLSLHVLCFVS*SEPCPCLAQFL
Trigger: AAGGAATTGGGCCAGACAGGGACACGGCTCACTCCAGCTGACAAAGCAGAGCACATGAAGCGACAAAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
ENST00000486234.1
CDS CAA 90 bp ATGAACAGGACGAAGCCACCTGCAAAGAAACAATCCAGGGCTATGTaGTGGGCACCCAGGGTAGAGGCTGTCACCATTCCCCACTTTGGT +
Preference number: 6 (lower is better)
Translates to: MNRTKPPAKKQSRAM*WAPRVEAVTIPHFG
Trigger: ACCAAAGTGGGGAATGGTGACAGCCTCTACCCTGGGTGCCCACAACATAGCCCTGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CCA 72 bp CTTTCCCATACCCAGGTCTCTCTGGATGACACCCAATaGCACATGGGGCAAAACTTCCTTGACTCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: LSHTQVSLDDTQ*HMGQNFLDSLS
Trigger: GCTCAGAGAGTCAAGGAAGTTTTGCCCCATGTGCCATTGGGTGTCATCCAGAGAGACCTGGGTATGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462297.1
CDS CAA 90 bp CACCGTCACAGAGACCAGGGGTCTCTGAACTTGCAGGGTAAGAGGTaGTACCACATCTTGGATAGAAAATGGCCAGGAACTGAAGCGCAG +
Preference number: 6 (lower is better)
Translates to: HRHRDQGSLNLQGKR*YHILDRKWPGTEAQ
Trigger: CTGCGCTTCAGTTCCTGGCCATTTTCTATCCAAGATGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTCTGTGACGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
CDS CAA 90 bp CTCTCGGCCTCGCTCTCACTCACGGTGCTACAGGTGGTAAGCAAATaGACTATGTTGTGGTCGAAAGGTGTCACATGGTTGGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: LSASLSLTVLQVVSK*TMLWSKGVTWLEMR
Trigger: CCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCGTGAGTGAGAGCGAGGCCGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463900.5
ENST00000466894.5
CDS TCA 72 bp AGTGCAAACTCCTCATTCGCTTCCCCTAGTTGGCGATaGACAGGACGAAGCCACCTGCAAAGAAACAATCCA +
Preference number: 6 (lower is better)
Translates to: SANSSFASPSWR*TGRSHLQRNNP
Trigger: TGGATTGTTTCTTTGCAGGTGGCTTCGTCCTGTTCATCGCCAACTAGGGGAAGCGAATGAGGAGTTTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CCA 72 bp TCTGGCCCAATTCCTTGGCCACCAGCTAGGGAGAATTaGAAGACTGGAAGTGTCAAGATCTCAAGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: SGPIPWPPAREN*KTGSVKISSFP
Trigger: AGGAAAGCTTGAGATCTTGACACTTCCAGTCTTCCAATTCTCCCTAGCTGGTGGCCAAGGAATTGGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464887.1
ENST00000486234.1
CDS CAA 90 bp TCGCTCTCACTCACGGTGCTACAGGTGGTAAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACATGGTTGGAAATGAGGACCCTGACA +
Preference number: 6 (lower is better)
Translates to: SLSLTVLQVVSKLTM*WSKGVTWLEMRTLT
Trigger: TGTCAGGGTCCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCGTGAGTGAGAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463900.5
ENST00000466894.5
CDS TCA 72 bp GACCTTGAGGTGAGCCTCTCCCCAGCGACCAAAATGTaGGGACAGTTAATACCTTACTTGATACACCGTGAA +
Preference number: 6 (lower is better)
Translates to: DLEVSLSPATKM*GQLIPYLIHRE
Trigger: TTCACGGTGTATCAAGTAAGGTATTAACTGTCCTCACATTTTGGTCGCTGGGGAGAGGCTCACCTCAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464887.1
CDS CAA 72 bp TCTCTGAACTTGCAGGGTAAGAGGTTGTACCACATCTaGGATAGAAAATGGCCAGGAACTGAAGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SLNLQGKRLYHI*DRKWPGTEAQE
Trigger: CTCCTGCGCTTCAGTTCCTGGCCATTTTCTATCCAAGATGTGGTACAACCTCTTACCCTGCAAGTTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
CDS CAA 72 bp AGAGACCAGGGGTCTCTGAACTTGCAGGGTAAGAGGTaGTACCACATCTTGGATAGAAAATGGCCAGGAACT +
Preference number: 6 (lower is better)
Translates to: RDQGSLNLQGKR*YHILDRKWPGT
Trigger: AGTTCCTGGCCATTTTCTATCCAAGATGTGGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTGGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000463900.5
ENST00000464887.1
ENST00000466894.5
CDS CAA 72 bp TCGCTCTCACTCACGGTGCTACAGGTGGTAAGCAAATaGACTATGTTGTGGTCGAAAGGTGTCACATGGTTG +
Preference number: 6 (lower is better)
Translates to: SLSLTVLQVVSK*TMLWSKGVTWL
Trigger: CAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCGTGAGTGAGAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463900.5
ENST00000466894.5
CDS CAA 90 bp CTATTGAGTAGAGGGGTGCTACAGGTGGTAAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACATGGTTGGAAATGAGGACCCTGACA +
Preference number: 6 (lower is better)
Translates to: LLSRGVLQVVSKLTM*WSKGVTWLEMRTLT
Trigger: TGTCAGGGTCCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCCCTCTACTCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000472800.1
CDS CAA 90 bp GCACCCAGGGTAGAGGCTGTCACCATTCCCCACTTTGGTACCTCTTaGCATGGTGGGTGGGAAAATAGTAAATACTGTAAATACTTTGTG +
Preference number: 6 (lower is better)
Translates to: APRVEAVTIPHFGTS*HGGWENSKYCKYFV
Trigger: CACAAAGTATTTACAGTATTTACTATTTTCCCACCCACCATGCAAAGAGGTACCAAAGTGGGGAATGGTGACAGCCTCTACCCTGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464887.1
CDS CAA 72 bp AGAGGGGTGCTACAGGTGGTAAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACATGGTTGGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: RGVLQVVSKLTM*WSKGVTWLEMR
Trigger: CCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000472800.1
CDS CAA 72 bp CTCACGGTGCTACAGGTGGTAAGCAAATTGACTATGTaGTGGTCGAAAGGTGTCACATGGTTGGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: LTVLQVVSKLTM*WSKGVTWLEMR
Trigger: CCTCATTTCCAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463900.5
ENST00000466894.5
CDS CAA 72 bp CTATTGAGTAGAGGGGTGCTACAGGTGGTAAGCAAATaGACTATGTTGTGGTCGAAAGGTGTCACATGGTTG +
Preference number: 6 (lower is better)
Translates to: LLSRGVLQVVSK*TMLWSKGVTWL
Trigger: CAACCATGTGACACCTTTCGACCACAACATAGTCAATTTGCTTACCACCTGTAGCACCCCTCTACTCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377526.4
ENST00000425118.5
ENST00000472800.1
CDS CAA 72 bp GAGTCATCATCATTAAACACGCATCGAATGCCTACTTaGCAAGAGAGGCACTATGCTAGGGTCTCAGGATCA +
Preference number: 6 (lower is better)
Translates to: ESSSLNTHRMPT*QERHYARVSGS
Trigger: TGATCCTGAGACCCTAGCATAGTGCCTCTCTTGCAAAGTAGGCATTCGATGCGTGTTTAATGATGATGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486234.1
CDS CAA 72 bp GTAGAGGCTGTCACCATTCCCCACTTTGGTACCTCTTaGCATGGTGGGTGGGAAAATAGTAAATACTGTAAA +
Preference number: 6 (lower is better)
Translates to: VEAVTIPHFGTS*HGGWENSKYCK
Trigger: TTTACAGTATTTACTATTTTCCCACCCACCATGCAAAGAGGTACCAAAGTGGGGAATGGTGACAGCCTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464887.1
CDS TCA 72 bp AATGTGAGGACAGTTAATACCTTACTTGATACACCGTaGAAGGGACGAAAAGTGACCACAGCAGTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: NVRTVNTLLDTP*KGRKVTTAVLR
Trigger: TCTCAGAACTGCTGTGGTCACTTTTCGTCCCTTTCACGGTGTATCAAGTAAGGTATTAACTGTCCTCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464887.1