RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN7L3B (Homo sapiens)

Ensembl gene IDs: ENSG00000253719

Ensembl transcript IDs: ENST00000519948.4

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACTaGATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: QDLAHILVCLEINRH*MARRLCSSSCPGLQ
Trigger: CTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 90 bp GGGCACACAACTGCTCACCTGTGCACTGGGGGCACTACAGGATCTTaGGCACATCCTGGTGTGTTTAGAGATCAACAGGCACTGCATGGC +
Preference number: 1 (lower is better)
Translates to: GHTTAHLCTGGTTGS*AHPGVFRDQQALHG
Trigger: GCCATGCAGTGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGTTGTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 90 bp CAGCTGAAAGTGCCCTCTGGGCTCAGTTTTCAAACCACAGCCTCCTaGACAGCCATGATGCTCTTCCATACTTCAGTCCTGCCCCCAGGG +
Preference number: 1 (lower is better)
Translates to: QLKVPSGLSFQTTAS*TAMMLFHTSVLPPG
Trigger: CCCTGGGGGCAGGACTGAAGTATGGAAGAGCATCATGGCTGTGCAGGAGGCTGTGGTTTGAAAACTGAGCCCAGAGGGCACTTTCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp TCCATACTTCAGTCCTGCCCCCAGGGTGGGAGGCAGATAGTGACCTaGCTTAAGGACCAAGTCACACCCATGGACTGGCTAGGTAACCAG +
Preference number: 1 (lower is better)
Translates to: SILQSCPQGGRQIVT*LKDQVTPMDWLGNQ
Trigger: CTGGTTACCTAGCCAGTCCATGGGTGTGACTTGGTCCTTAAGTCAGGTCACTATCTGCCTCCCACCCTGGGGGCAGGACTGAAGTATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp CAGATATCAAAGGAGCAGTCCCACTGCAGGCCACTGATCACGGCCTaGCGAACTGTAACGTCCAAACTGTCCAAGAAGCCCTTGACATCA +
Preference number: 1 (lower is better)
Translates to: QISKEQSHCRPLITA*RTVTSKLSKKPLTS
Trigger: TGATGTCAAGGGCTTCTTGGACAGTTTGGACGTTACAGTTCGTCAGGCCGTGATCAGTGGCCTGCAGTGGGACTGCTCCTTTGATATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp AGACAGAAAGTGGTGACAGTCTGGATGTTCACCATAGCAGAGCTCTaGCTGCCCAACCAAAGAAAACAGGGACATTCAACAGGATTCTGC +
Preference number: 1 (lower is better)
Translates to: RQKVVTVWMFTIAEL*LPNQRKQGHSTGFC
Trigger: GCAGAATCCTGTTGAATGTCCCTGTTTTCTTTGGTTGGGCAGTCAGAGCTCTGCTATGGTGAACATCCAGACTGTCACCACTTTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp AAGGCCAGAAAGAAAACAGTAATTTCAGGATTTGAGTTCCCTATCTaGAGGCAGAGGGATTGGACTGTGGCCTTTCTCCTTTACCATCAT +
Preference number: 1 (lower is better)
Translates to: KARKKTVISGFEFPI*RQRDWTVAFLLYHH
Trigger: ATGATGGTAAAGGAGAAAGGCCACAGTCCAATCCCTCTGCCTTCAGATAGGGAACTCAAATCCTGAAATTACTGTTTTCTTTCTGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 90 bp TTTAAGTTTTCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTaGACAGTGACAAGTACATCGAGTGCTCCTAGAAGAGAAGACTCA +
Preference number: 1 (lower is better)
Translates to: FKFSQITTLALAYLN*TVTSTSSAPRREDS
Trigger: TGAGTCTTCTCTTCTAGGAGCACTCGATGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGAAAACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp GACTGGATTTATCTTACCACCTTCTTACCTCATATGGAAAAGGGATaGTTGTATACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTT +
Preference number: 1 (lower is better)
Translates to: DWIYLTTFLPHMEKG*LYTVWLFHWMLQTV
Trigger: AACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGTATACAATCATCCCTTTTCCATATGAGGTAAGAAGGTGGTAAGATAAATCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 90 bp TTTAGTGACAGGACTGGATTTATCTTACCACCTTCTTACCTCATATaGAAAAGGGATGATTGTATACGGTTTGGCTCTTTCACTGGATGC +
Preference number: 1 (lower is better)
Translates to: FSDRTGFILPPSYLI*KRDDCIRFGSFTGC
Trigger: GCATCCAGTGAAAGAGCCAAACCGTATACAATCATCCCTTTTCCATATGAGGTAAGAAGGTGGTAAGATAAATCCAGTCCTGTCACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 90 bp ATATGGAAAAGGGATGATTGTATACGGTTTGGCTCTTTCACTGGATaGTACAGACAGTTAAATTTGCAGGCCAAATTGAGAAACAAGGTT +
Preference number: 1 (lower is better)
Translates to: IWKRDDCIRFGSFTG*YRQLNLQAKLRNKV
Trigger: AACCTTGTTTCTCAATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGTATACAATCATCCCTTTTCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 90 bp ACATACACACACACACACACTCAGATACATAATAGGATTGCAGGGTaGTCAATACACATAATCAAGGGAAAAATAGGAATTCTGCTATTA +
Preference number: 1 (lower is better)
Translates to: TYTHTHTQIHNRIAG*SIHIIKGKIGILLL
Trigger: TAATAGCAGAATTCCTATTTTTCCCTTGATTATGTGTATTGATCACCCTGCAATCCTATTATGTATCTGAGTGTGTGTGTGTGTGTATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp ATCATAACCGAATCCTCAACCTGTCTGGACAACCAAGTTGTCCATTaGCCAAGCCTATGCCACCAGGTTGGAGGGCAAGGAAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: IITESSTCLDNQVVH*PSLCHQVGGQGRGL
Trigger: GAGCCCTCTTCCTTGCCCTCCAACCTGGTGGCATAGGCTTGGCAAATGGACAACTTGGTTGTCCAGACAGGTTGAGGATTCGGTTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGACAACTGCTCACCTGTaGACTGGGGGCACTACAGGA +
Preference number: 2 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRTTAHL*TGGTTG
Trigger: TCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGTTGT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGCCACTGATCACGGCCTaGCGAACTGTAACGTCCAAA +
Preference number: 2 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGPLITA*RTVTSK
Trigger: TTTGGACGTTACAGTTCGTCAGGCCGTGATCAGTGG...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGTGTCCAAGAAGCCCTTaGCATCAGGCAGACAGAAAG +
Preference number: 2 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRCPRSP*HQADRK
Trigger: CTTTCTGTCTGCCTGATGTCAAGGGCTTCTTGGACA...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGAGATCAACAGGCACTaGATGGCCCGCAGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIEINRH*MARRLC
Trigger: GCACAGCCTGCGGGCCATGCAGTGCCTGTTGATCTC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGACCAAGTTGTCCATTTaGCAAGCCTATGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRTKLSI*QAYATR
Trigger: CCTGGTGGCATAGGCTTGGCAAATGGACAACTTGGT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp AAAGAAATTGGGCAGGCTTCGGAAGCAGGAGCATTAAGAGCTGAATaGAAACTGTTCAATGTGACAGCTGGAGTGGCAAGCAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: KEIGQASEAGALRAE*KLFNVTAGVASSTW
Trigger: CCAGGTGCTGCTTGCCACTCCAGCTGTCACATTGAACAGTTTCAATTCAGCTCTTAATGCTCCTGCTTCCGAAGCCTGCCCAATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACCCACTGCAGGCCACTaGTCACGGCCTGACGAACTG +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVPTAGH*SRPDEL
Trigger: CAGTTCGTCAGGCCGTGATCAGTGGCCTGCAGTGGG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGATCCATTCACATTATTaGGGGCAGCTGAAAGTGCCC +
Preference number: 2 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRIHSHY*GQLKVP
Trigger: GGGCACTTTCAGCTGCCCTCAATAATGTGAATGGAT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGTCCAGATCTTGCACCTaGCATTTACTTGTCTCAGAG +
Preference number: 2 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRSRSCT*HLLVSE
Trigger: CTCTGAGACAAGTAAATGTCAGGTGCAAGATCTGGA...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACTGCACACAGTCAGATaGGATAATCCAGTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTLHTVR*DNPVLL
Trigger: GAGCAGGACTGGATTATCTCATCTGACTGTGTGCAG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTATCAACAGGCACTGCATaGCCCGCAGGCTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVSTGTA*PAGCAA
Trigger: AGCTGCACAGCCTGCGGGCCATGCAGTGCCTGTTGA...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAACCATAGCAGAGCTCTaGCTGCCCAACCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTTIAEL*LPNQRK
Trigger: TTTTCTTTGGTTGGGCAGTCAGAGCTCTGCTATGGT...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCATTTGCCAAGCCTATaGCACCAGGTTGGAGGGCAA +
Preference number: 2 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFHLPSL*HQVGGQ
Trigger: TTGCCCTCCAACCTGGTGGCATAGGCTTGGCAAATG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTGTAGTCTGGACTTTTaGGAAACACGTGGTTTTGAC +
Preference number: 2 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGCSLDF*ETRGFD
Trigger: GTCAAAACCACGTGTTTCCCAAAAGTCCAGACTACA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCCAAAGGGGACCGAGTaGAAAGGACTATCCCTTTCG +
Preference number: 2 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFPKGTE*KGLSLS
Trigger: CGAAAGGGATAGTCCTTTCCACTCGGTCCCCTTTGG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACATGTCCTCAAGTCAGCTaGATCATTGTAGTCTGGACT +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTCPQVS*IIVVWT
Trigger: AGTCCAGACTACAATGATTCAGCTGACTTGAGGACA...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTGGCACTACAGGATCTTaGGCACATCCTGGTGTGTTT +
Preference number: 2 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFGTTGS*AHPGVF
Trigger: AAACACACCAGGATGTGCGCAAGATCCTGTAGTGCC...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAAAAGTGGTGACAGTCTaGATGTTCACCATAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTKVVTV*MFTIAE
Trigger: CTCTGCTATGGTGAACATCCAGACTGTCACCACTTT...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACATTGACCTTTTCTTCTTaGTGGAGTCAAGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTLTFSS*WSQGYR
Trigger: TCTGTAGCCTTGACTCCAGCAAGAAGAAAAGGTCAA...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGAAATCATGCATAGTTaGAGAGGTCCCTGCTACCTC +
Preference number: 2 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIEIMHS*RGPCYL
Trigger: GAGGTAGCAGGGACCTCTGCAACTATGCATGATTTC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACAAACCACAGCCTCCTaGACAGCCATGATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVQTTAS*TAMMLF
Trigger: GAAGAGCATCATGGCTGTGCAGGAGGCTGTGGTTTG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTCTGGGCATGCGATGGTaGGAACTAATGTATGGAAGA +
Preference number: 2 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQILGMRW*ELMYGR
Trigger: TCTTCCATACATTAGTTCCCACCATCGCATGCCCAG...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACTGGAGGTCTTTCTCTaGCTTCTAACAATAAAAGGA +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTLEVFL*LLTIKG
Trigger: TCCTTTTATTGTTAGAAGTCAGAGAAAGACCTCCAG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTTCTGGGATAAGGATTaGTACATGCACAGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIFWDKD*YMHSKG
Trigger: ACCCTTGCTGTGCATGTATCAATCCTTATCCCAGAA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAAGTAATTTCAGGATTTaGGTTCCCTATCTGAAGGCA +
Preference number: 2 (lower is better)
Translates to: SQITTLALAYLNWTVTSTSNFRI*VPYLKA
Trigger: TGCCTTCAGATAGGGAACTCAAATCCTGAAATTACT...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp GGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATaGAGAAACAAGGTTGGACAGTTTCTCTGTTCTGATAAAACTCCT +
Preference number: 2 (lower is better)
Translates to: GSFTGCYRQLNLQAK*RNKVGQFLCSDKTP
Trigger: AGGAGTTTTATCAGAACAGAGAAACTGTCCAACCTTGTTTCTCAATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp TGTATACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTaGCAGGCCAAATTGAGAAACAAGGTTGGACAGTTTCTCTGTTCT +
Preference number: 2 (lower is better)
Translates to: CIRFGSFTGCYRQLN*QAKLRNKVGQFLCS
Trigger: AGAACAGAGAAACTGTCCAACCTTGTTTCTCAATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp ATGGGTTTCACACGTCAAATTTTTAAGTTTTCTCAAATCACCACGTaGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACATCGAGT +
Preference number: 2 (lower is better)
Translates to: MGFTRQIFKFSQITT*ALAYLNWTVTSTSS
Trigger: ACTCGATGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGAAAACTTAAAAATTTGACGTGTGAAACCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTAAGTTTGAGAAATCATaGATAGTTGCAGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIKFEKS*IVAEVP
Trigger: AGGGACCTCTGCAACTATGCATGATTTCTCAAACTT...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGGCAGACAGAAAGGCTaGGGAACCAAAAATTTTATA +
Preference number: 2 (lower is better)
Translates to: SQTETVSIQILHLTFTCLGRQKG*GTKNFI
Trigger: TATAAAATTTTTGGTTCCTCAGCCTTTCTGTCTGCC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTCCAGACATGAATCTTaGAGTTTGAGAAATCATGCA +
Preference number: 2 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFSRHES*SLRNHA
Trigger: TGCATGATTTCTCAAACTTCAAGATTCATGTCTGGA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGGTAGTTTTGATATGTaGCTCTTACTTCCCATCTTC +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVGSFDM*LLLPIF
Trigger: GAAGATGGGAAGTAAGAGTCACATATCAAAACTACC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAAGAAAGATTCTCCTCTaGGTCTTCTACAAAAACAAG +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVRKILL*VFYKNK
Trigger: CTTGTTTTTGTAGAAGACTCAGAGGAGAATCTTTCT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR GCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAACCAAAAATTTTATATaGTGGGCACACAACTGCTCA +
Preference number: 2 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVTKNFI*WAHNCS
Trigger: TGAGCAGTTGTGTGCCCAGCATATAAAATTTTTGGT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp GAAATCTTACTTAAGGCAAAATACCCAATCTTGGTGAAATTTCATTaGAAGAATTTCTCCTGCTATGGTTACATCATGGGTTTCACACGT +
Preference number: 2 (lower is better)
Translates to: EILLKAKYPILVKFH*KNFSCYGYIMGFTR
Trigger: ACGTGTGAAACCCATGATGTAACCATAGCAGGAGAAATTCTTCAAATGAAATTTCACCAAGATTGGGTATTTTGCCTTAAGTAAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 90 bp TGCTTCCAAGTATTCATTAATAAGTATAGTAACTGGTGTAGATTTTaGGTACATACCCTTTTGCAGTGTGTACAAGTTCTTGAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: CFQVFINKYSNWCRF*VHTLLQCVQVLELW
Trigger: CCAAAGCTCAAGAACTTGTACACACTGCAAAAGGGTATGTACCAAAAATCTACACCAGTTACTATACTTATTAATGAATACTTGGAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp TTAGAGATCAACAGGCACTGCATGGCCCGCAGGCTGTaGAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: LEINRHCMARRL*SSSCPGLQSLL
Trigger: GAGCAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTGCCTGTTGATCTCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp GCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACTaGATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: AHILVCLEINRH*MARRLCSSSCP
Trigger: TGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTGCCTGTTGATCTCTAAACACACCAGGATGTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp AAGGAGCAGTCCCACTGCAGGCCACTGATCACGGCCTaGCGAACTGTAACGTCCAAACTGTCCAAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: KEQSHCRPLITA*RTVTSKLSKKP
Trigger: GGGCTTCTTGGACAGTTTGGACGTTACAGTTCGTCAGGCCGTGATCAGTGGCCTGCAGTGGGACTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp ACTGCTCACCTGTGCACTGGGGGCACTACAGGATCTTaGGCACATCCTGGTGTGTTTAGAGATCAACAGGCA +
Preference number: 3 (lower is better)
Translates to: TAHLCTGGTTGS*AHPGVFRDQQA
Trigger: TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 72 bp TTTATATGCTGGGCACACAACTGCTCACCTGTGCACTaGGGGCACTACAGGATCTTGCGCACATCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: FICWAHNCSPVH*GHYRILRTSWC
Trigger: ACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGTTGTGTGCCCAGCATATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGCCTATGCCACCAGGTaGGAGGGCAAGGAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: SQITTLALAYLNWTVTSTAYATR*EGKEEG
Trigger: GCCCTCTTCCTTGCCCTCCAACCTGGTGGCATAGGC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp AATCCTCAACCTGTCTGGACAACCAAGTTGTCCATTTaGCAAGCCTATGCCACCAGGTTGGAGGGCAAGGAA +
Preference number: 3 (lower is better)
Translates to: NPQPVWTTKLSI*QAYATRLEGKE
Trigger: TTCCTTGCCCTCCAACCTGGTGGCATAGGCTTGGCAAATGGACAACTTGGTTGTCCAGACAGGTTGAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 72 bp TGCTCCTGTTGTCAAGAAGATCCAAAGGGGACCGAGTaGAAAGGACTATCCCTTTCGAGCGGCAGACAGAAA +
Preference number: 3 (lower is better)
Translates to: CSCCQEDPKGTE*KGLSLSSGRQK
Trigger: TTTCTGTCTGCCGCTCGAAAGGGATAGTCCTTTCCACTCGGTCCCCTTTGGATCTTCTTGACAACAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp GCTCCTTGGCTCCTAGCACTAATCCATTCACATTATTaGGGGCAGCTGAAAGTGCCCTCTGGGCTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: APWLLALIHSHY*GQLKVPSGLSF
Trigger: AAAACTGAGCCCAGAGGGCACTTTCAGCTGCCCTCAATAATGTGAATGGATTAGTGCTAGGAGCCAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp GTGGTGACAGTCTGGATGTTCACCATAGCAGAGCTCTaGCTGCCCAACCAAAGAAAACAGGGACATTCAACA +
Preference number: 3 (lower is better)
Translates to: VVTVWMFTIAEL*LPNQRKQGHST
Trigger: TGTTGAATGTCCCTGTTTTCTTTGGTTGGGCAGTCAGAGCTCTGCTATGGTGAACATCCAGACTGTCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACTGTCCAAGAAGCCCTaGACATCAGGCAGACAGAAA +
Preference number: 3 (lower is better)
Translates to: SQITTLALAYLNWTVTSTLSKKP*TSGRQK
Trigger: TTTCTGTCTGCCTGATGTCAAGGGCTTCTTGGACAG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAAACCAAGTTGTCCATTaGCCAAGCCTATGCCACCAG +
Preference number: 3 (lower is better)
Translates to: SQITTLALAYLNWTVTSTNQVVH*PSLCHQ
Trigger: CTGGTGGCATAGGCTTGGCAAATGGACAACTTGGTT...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGGGCACTACAGGATCTaGCGCACATCCTGGTGTGTT +
Preference number: 3 (lower is better)
Translates to: SQTETVSIQILHLTFTCLGHYRI*RTSWCV
Trigger: AACACACCAGGATGTGCGCAAGATCCTGTAGTGCCC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGTCTGGACAACCAAGTaGTCCATTTGCCAAGCCTAT +
Preference number: 3 (lower is better)
Translates to: SQITTLALAYLNWTVTSTVWTTK*SICQAY
Trigger: ATAGGCTTGGCAAATGGACAACTTGGTTGTCCAGAC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp CCCAACCAAAGAAAACAGGGACATTCAACAGGATTCTaGACACAGTCAGATGAGATAATCCAGTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PNQRKQGHSTGF*TQSDEIIQSCS
Trigger: GGAGCAGGACTGGATTATCTCATCTGACTGTGTGCAGAATCCTGTTGAATGTCCCTGTTTTCTTTGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 72 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTaGACAGTGACAAGTACATCGAGTGCTCCTAGAAGA +
Preference number: 3 (lower is better)
Translates to: SQITTLALAYLN*TVTSTSSAPRR
Trigger: TCTTCTAGGAGCACTCGATGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCCAGGGCTTCAGAGCTaGCTCCAGGTAATACACTTT +
Preference number: 3 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFPGLQS*LQVIHF
Trigger: AAAGTGTATTACCTGGAGCAAGCTCTGAAGCCCTGG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp GGATTCTGCACACAGTCAGATGAGATAATCCAGTCCTaGTCCTTGGCTCCTAGCACTAATCCATTCACATTA +
Preference number: 3 (lower is better)
Translates to: GFCTQSDEIIQS*SLAPSTNPFTL
Trigger: TAATGTGAATGGATTAGTGCTAGGAGCCAAGGAGCAGGACTGGATTATCTCATCTGACTGTGTGCAGAATCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTTTGACCTTTTCTTCTaGCTGGAGTCAAGGCTACAG +
Preference number: 3 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFFDLFF*LESRLQ
Trigger: CTGTAGCCTTGACTCCAGCAAGAAGAAAAGGTCAAA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp AAGAAAACAGTAATTTCAGGATTTGAGTTCCCTATCTaGAGGCAGAGGGATTGGACTGTGGCCTTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: KKTVISGFEFPI*RQRDWTVAFLL
Trigger: AAGGAGAAAGGCCACAGTCCAATCCCTCTGCCTTCAGATAGGGAACTCAAATCCTGAAATTACTGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGACCAGTCTATGTTATaGTCCTGGCCACTTTCAGAC +
Preference number: 3 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVDQSML*SWPLSD
Trigger: GTCTGAAAGTGGCCAGGACAATAACATAGACTGGTC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGGGAAACACGTGGTTTaGACCTTTTCTTCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVGKHVV*TFSSCW
Trigger: CCAGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp CTATACAGTCTAAATAGTACCTTCTGGGATAAGGATTaGTACATGCACAGCAAGGGTGAGAGAATGGACAAG +
Preference number: 3 (lower is better)
Translates to: LYSLNSTFWDKD*YMHSKGERMDK
Trigger: CTTGTCCATTCTCTCACCCTTGCTGTGCATGTATCAATCCTTATCCCAGAAGGTACTATTTAGACTGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR GCA 72 bp AGGGATGATTGTATACGGTTTGGCTCTTTCACTGGATaGTACAGACAGTTAAATTTGCAGGCCAAATTGAGA +
Preference number: 3 (lower is better)
Translates to: RDDCIRFGSFTG*YRQLNLQAKLR
Trigger: TCTCAATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGTATACAATCATCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGTTAGTATCCAGATCTaGCACCTGACATTTACTTGT +
Preference number: 3 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIVSIQI*HLTFTC
Trigger: ACAAGTAAATGTCAGGTGCAAGATCTGGATACTAAC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAAATCCATTCACATTATaGAGGGCAGCTGAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVNPFTL*RAAESA
Trigger: GGCACTTTCAGCTGCCCTCAATAATGTGAATGGATT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp AGACTCAATACCATGTTACACATCTATAAGCTTCCCTaGGGTATCCTATTGAGTCAGATTCTTCTCTGGACT +
Preference number: 3 (lower is better)
Translates to: RLNTMLHIYKLP*GILLSQILLWT
Trigger: AGTCCAGAGAAGAATCTGACTCAATAGGATACCTCAGGGAAGCTTATAGATGTGTAACATGGTATTGAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp TTTGATTTATTACTCCATTGCTTCAACAAAGACCGCTaGCCTAGGAGTCACAACAGCAGCATTCTACTTTTG +
Preference number: 3 (lower is better)
Translates to: FDLLLHCFNKDR*PRSHNSSILLL
Trigger: CAAAAGTAGAATGCTGCTGTTGTGACTCCTAGGTCAGCGGTCTTTGTTGAAGCAATGGAGTAATAAATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CCA 72 bp AGGACTGGATTTATCTTACCACCTTCTTACCTCATATaGAAAAGGGATGATTGTATACGGTTTGGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: RTGFILPPSYLI*KRDDCIRFGSF
Trigger: GAAAGAGCCAAACCGTATACAATCATCCCTTTTCCATATGAGGTAAGAAGGTGGTAAGATAAATCCAGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR TCA 72 bp ATTTGGAGCAATGATATTGATTGCATTTTCTGTGCGTaGACATCTTCTCTCCATTTACTTGGGATTTTCCCA +
Preference number: 3 (lower is better)
Translates to: IWSNDIDCIFCA*TSSLHLLGIFP
Trigger: TGGGAAAATCCCAAGTAAATGGAGAGAAGATGTTCACGCACAGAAAATGCAATCAATATCATTGCTCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCCTTTCAGCTGCGCCTaGCCCAGGACTCACCGCCAA +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLPFSCA*PRTHRQ
Trigger: TTGGCGGTGAGTCCTGGGCCAGGCGCAGCTGAAAGG...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCATTTGCCAAGCCTATaGCACCAGGTTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLHLPSL*HQVGGQ
Trigger: TTGCCCTCCAACCTGGTGGCATAGGCTTGGCAAATG...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCACGCTACCAGTCTCTaGGAACTCCAGGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLHATSL*ELQVEV
Trigger: TACTTCTACCTGGAGTTCGCAGAGACTGGTAGCGTG...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCTTCCACTGGCTGAATaGCAAAATCCTTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLLPLAE*QNPSRY
Trigger: GTAGCGTGAAGGATTTTGGCATTCAGCCAGTGGAAG...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGCGGCAGCAACACGTCTaGCTCCGCGGGCCGCGCCTA +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRRQQHV*LRGPRL
Trigger: TAGGCGCGGCCCGCGGAGCCAGACGTGTTGCTGCCG...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGCACATAGCAAGAGACTaGTTAGGACACAGGATCACT +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLHIARD*LGHRIT
Trigger: AGTGATCCTGTGTCCTAATCAGTCTCTTGCTATGTG...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACCAGGCAGTGGTCCCTaGGCATGCGATGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAPGSGP*ACDGGN
Trigger: GTTCCCACCATCGCATGCCCAGGGACCACTGCCTGG...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTGCGGGCCTTTCAGCTaGGCCTGGCCCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGCGPFS*AWPRTH
Trigger: GTGAGTCCTGGGCCAGGCGCAGCTGAAAGGCCCGCA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCAAGGGCAGGAGGCTACTaGCCTATTGGTAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQARAGGY*PIGRGA
Trigger: GGCCCCTCTACCAATAGGGCAGTAGCCTCCTGCCCT...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGGAAGTGCTCAAACTCTaGGTTAGGAATGGGATGAAA +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLEVLKL*VRNGMK
Trigger: TTTCATCCCATTCCTAACCCAGAGTTTGAGCACTTC...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCGGCGGCGGGGTCGGTaGCGTCCGCAACTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFRRRGR*RPQLQE
Trigger: CTCCTGCAGTTGCGGACGCCACCGACCCCGCCGCCG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGAATAGGATTGCAGGGTaGTCAATACACATAATCAAG +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLNRIAG*SIHIIK
Trigger: CTTGATTATGTGTATTGATCACCCTGCAATCCTATT...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGGTGGCGTCCGCAACTaGAGGAGCAGCGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTGGVRN*RSSDRG
Trigger: GCCCCTATCGCTGCTCCTGCAGTTGCGGACGCCACC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCATGCTCACCTGTGCACTaGGGGCACTACAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQACSPVH*GHYRIL
Trigger: CAAGATCCTGTAGTGCCCCCAGTGCACAGGTGAGCA...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGGTATTGAAATGGAGGTaGGAAGATACAACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLVLKWR*EDTTPY
Trigger: ATAAGGAGTTGTATCTTCCCACCTCCATTTCAATAC...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCAATTATTGAGGGCAGCTaGAAGTGCCCTCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAIIEGS*KCPLGS
Trigger: TGAGCCCAGAGGGCACTTTCAGCTGCCCTCAATAAT...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGTTTGAGATGAAATCTTaGCATCCTGTGATTAAACTG +
Preference number: 4 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLFEMKS*HPVIKL
Trigger: CAGTTTAATCACAGGATGGCAAGATTTCATCTCAAA...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACCAAAGGGGACCGAGTaGAAAGGACTATCCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAPKGTE*KGLSLS
Trigger: CGAAAGGGATAGTCCTTTCCACTCGGTCCCCTTTGG...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 72 bp GAATCCTCAACCTGTCTGGACAACCAAGTTGTCCATTaGCCAAGCCTATGCCACCAGGTTGGAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ESSTCLDNQVVH*PSLCHQVGGQG
Trigger: TCCTTGCCCTCCAACCTGGTGGCATAGGCTTGGCAAATGGACAACTTGGTTGTCCAGACAGGTTGAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACTGCACACAGTCAGATaGGATAATCCAGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQALHTVR*DNPVLL
Trigger: GAGCAGGACTGGATTATCTCATCTGACTGTGTGCAG...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCAGCAGACAGAAAGTGGTaGCAGTCTGGATGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAADRKW*QSGCSP
Trigger: TGGTGAACATCCAGACTGTCACCACTTTCTGTCTGC...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTCTAGAGGCCTTTCAGTaGCCAGTCCTCCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQILEAFQ*PVLRRR
Trigger: CCGCCGCCGGAGGACTGGGCACTGAAAGGCCTCTAG...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGAGATCAACAGGCACTaGATGGCCCGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTEINRH*MARRLC
Trigger: GCACAGCCTGCGGGCCATGCAGTGCCTGTTGATCTC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGCCGATGATCCCAGCATaGGATAATGCCAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRPMIPA*DNARQW
Trigger: CCACTGCCTGGCATTATCGCATGCTGGGATCATCGG...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTCCTTCTGTTTGTTTTaGCGTTTCCCGGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGSFCLF*RFPGCG
Trigger: CCCGCAACCCGGGAAACGTCAAAACAAACAGAAGGA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCATTGTCTTCCACTGGCTaGATGCCAAAATCCTTCACG +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQALSSTG*MPKSFT
Trigger: CGTGAAGGATTTTGGCATTCAGCCAGTGGAAGACAA...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTCCCACTGCAGGCCACTaGTCACGGCCTGACGAACTG +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIPTAGH*SRPDEL
Trigger: CAGTTCGTCAGGCCGTGATCAGTGGCCTGCAGTGGG...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGGTTCAATGTGACAGCTaGAGTGGCAAGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRVQCDS*SGKQHL
Trigger: CAGGTGCTGCTTGCCACTCCAGCTGTCACATTGAAC...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCTGGAATTCCGGAGGTaGGCGCTGCAGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFLEFRR*ALQLLI
Trigger: GATCAGCAGCTGCAGCGCTCACCTCCGGAATTCCAG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGCCAAGCCAGACAGATaGGGCTGGACCCCCTACTGG +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLAKPDR*GWTPYW
Trigger: CCAGTAGGGGGTCCAGCCTCATCTGTCTGGCTTGGC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGGGCACTACAGGATCTTaGGCACATCCTGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRGTTGS*AHPGVF
Trigger: AAACACACCAGGATGTGCGCAAGATCCTGTAGTGCC...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTGCTGGGCACACAACTaGTCACCTGTGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFCWAHN*SPVHWG
Trigger: CCCCCAGTGCACAGGTGAGCAGTTGTGTGCCCAGCA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGACCAAGTTGTCCATTTaGCAAGCCTATGCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGTKLSI*QAYATR
Trigger: CCTGGTGGCATAGGCTTGGCAAATGGACAACTTGGT...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTCCATACTTCAGTCCTaGCCCCAGGGTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQISILQS*PQGGRQ
Trigger: CTGCCTCCCACCCTGGGGGCAGGACTGAAGTATGGA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTCAACAGGCACTGCATaGCCCGCAGGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFSTGTA*PAGCAA
Trigger: AGCTGCACAGCCTGCGGGCCATGCAGTGCCTGTTGA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGAGCGCTGCAGCTGCTaGTCAGGCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVERCSC*SGPFPG
Trigger: ACCTGGGAATGGGCCTGATCAGCAGCTGCAGCGCTC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGAGGCAGATAGTGACCTaGCTTAAGGACCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRRQIVT*LKDQVT
Trigger: TGTGACTTGGTCCTTAAGTCAGGTCACTATCTGCCT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACCTCCTGCACAGCCATaGTGCTCTTCCATACTTCAG +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTPPAQP*CSSILQ
Trigger: CTGAAGTATGGAAGAGCATCATGGCTGTGCAGGAGG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTAGCGATAGGGGCGACTaGTCCGGAATCCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQISDRGD*SGIPSP
Trigger: AGGACTTGGGATTCCGGAGCAGTCGCCCCTATCGCT...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTAGTTGCAGAGGTCCCTaGTACCTCCCCAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQISCRGP*YLPRGS
Trigger: TGATCCCCTGGGGAGGTAGCAGGGACCTCTGCAACT...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGGAAATCATGCATAGTTaGAGAGGTCCCTGCTACCTC +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGEIMHS*RGPCYL
Trigger: GAGGTAGCAGGGACCTCTGCAACTATGCATGATTTC...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTAACAAAGGACAGTGGTaGGCTTCACTACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQINKGQW*ASLPSP
Trigger: GGGGGAGGGTAGTGAAGCTCACCACTGTCCTTTGTT...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTACAACTGCTCACCTGTaGACTGGGGGCACTACAGGA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFTTAHL*TGGTTG
Trigger: TCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGTTGT...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGCTGAAAGTGCCCTCTaGGCTCAGTTTTCAAACCAC +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTAESAL*AQFSNH
Trigger: GTGGTTTGAAAACTGAGCCCAGAGGGCACTTTCAGC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGCCGGCAGTATTGAAATaGAGGTGGGAAGATACAACT +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGPAVLK*RWEDTT
Trigger: AGTTGTATCTTCCCACCTCCATTTCAATACTGCCGG...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGATCTATAAGCTTCCCTaGGGTATCCTATTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRIYKLP*GILLSQ
Trigger: CTGACTCAATAGGATACCTCAGGGAAGCTTATAGAT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCAGTGTGTACAAGTTCTTaGGCTTTGGTTTCTATATTG +
Preference number: 4 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAVCTSS*ALVSIL
Trigger: CAATATAGAAACCAAAGCTCAAGAACTTGTACACAC...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTCAAACCACAGCCTCCTaGACAGCCATGATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIQTTAS*TAMMLF
Trigger: GAAGAGCATCATGGCTGTGCAGGAGGCTGTGGTTTG...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGTCCTTTGTCTTCCACTaGCTGAATGCCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRSFVFH*LNAKIL
Trigger: AAGGATTTTGGCATTCAGCCAGTGGAAGACAAAGGA...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGGAGTATGTACCCTCTaGGCACCTGTTGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLGVCTL*APVGPS
Trigger: GCTTGGTCCAACAGGTGCCCAGAGGGTACATACTCC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGAACTATCTGTCACAGTaGGCTTTTAGTGACAGGACT +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRNYLSQ*AFSDRT
Trigger: AGTCCTGTCACTAAAAGCCCACTGTGACAGATAGTT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTGTCCAAGAAGCCCTTaGCATCAGGCAGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFCPRSP*HQADRK
Trigger: CTTTCTGTCTGCCTGATGTCAAGGGCTTCTTGGACA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGGGTAGTTTTGATATGTaGCTCTTACTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRGSFDM*LLLPIF
Trigger: GAAGATGGGAAGTAAGAGTCACATATCAAAACTACC...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACATTCTGGGATAAGGATTaGTACATGCACAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTFWDKD*YMHSKG
Trigger: ACCCTTGCTGTGCATGTATCAATCCTTATCCCAGAA...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTTCAACAAAGACCGCTaGCCTAGGAGTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIFNKDR*PRSHNS
Trigger: GCTGTTGTGACTCCTAGGTCAGCGGTCTTTGTTGAA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAGGCAGAACCATCGTCTaGTGTGAATCACTTTACCTT +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTGRTIV*CESLYL
Trigger: AAGGTAAAGTGATTCACAGCAGACGATGGTTCTGCC...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTCCAGTCCTGCTCCTTaGCTCCTAGCACTAATCCAT +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQISSPAP*LLALIH
Trigger: ATGGATTAGTGCTAGGAGCCAAGGAGCAGGACTGGA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGCAAGGGTGAGAGAATaGACAAGGACCAACTCCATC +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIARVRE*TRTNSI
Trigger: GATGGAGTTGGTCCTTGTCCATTCTCTCACCCTTGC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTACCATAGCAGAGCTCTaGCTGCCCAACCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFTIAEL*LPNQRK
Trigger: TTTTCTTTGGTTGGGCAGTCAGAGCTCTGCTATGGT...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGAGAAAGATTCTCCTCTaGGTCTTCTACAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGRKILL*VFYKNK
Trigger: CTTGTTTTTGTAGAAGACTCAGAGGAGAATCTTTCT...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCCTAACCGGCAGTATTaGAATGGAGGTGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFPNRQY*NGGGKI
Trigger: TATCTTCCCACCTCCATTTCAATACTGCCGGTTAGG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTTTGAGTTCCCTATCTaGAGGCAGAGGGATTGGACT +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIFEFPI*RQRDWT
Trigger: AGTCCAATCCCTCTGCCTTCAGATAGGGAACTCAAA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACAATTTGCAGGCCAAATTaGGAAACAAGGTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTICRPN*ETRLDS
Trigger: ACTGTCCAACCTTGTTTCTCAATTTGGCCTGCAAAT...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTTGAAGAATTTCTCCTaGTATGGTTACATCATGGGT +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGLKNFS*YGYIMG
Trigger: ACCCATGATGTAACCATAGCAGGAGAAATTCTTCAA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACATGTAGTCTGGACTTTTaGGAAACACGTGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTCSLDF*ETRGFD
Trigger: GTCAAAACCACGTGTTTCCCAAAAGTCCAGACTACA...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCTGGGCATGCGATGGTaGGAACTAATGTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFLGMRW*ELMYGR
Trigger: TCTTCCATACATTAGTTCCCACCATCGCATGCCCAG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCTCCCTGGGCATGCGATaGTGGGAACTAATGTATGGA +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLSLGMR*WELMYG
Trigger: TCCATACATTAGTTCCCACCATCGCATGCCCAGGGA...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACATTTATCAGATTCTTaGCCTGATGGTACATGCTGT +
Preference number: 4 (lower is better)
Translates to: SQITTLALAYLNWTVTSTHLSDS*PDGTCC
Trigger: ACAGCATGTACCATCAGGTCAAGAATCTGATAAATG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGAGATAATCCAGTCCTaGTCCTTGGCTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVEIIQS*SLAPST
Trigger: AGTGCTAGGAGCCAAGGAGCAGGACTGGATTATCTC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTTTAATTGCTCCATATaGCTTTCAGAGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGFNCSI*LSELMS
Trigger: TGACATCAACTCTGAAAGGCATATGGAGCAATTAAA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTATCATTTTGCAGCTACTaGAATTCCGGAGGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVSFCSY*NSGGER
Trigger: GCGCTCACCTCCGGAATTCCAGTAGCTGCAAAATGA...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGCCGATTCACATAATTTaGAGCAATGATATTGATTGC +
Preference number: 4 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRPIHII*SNDIDC
Trigger: GCAATCAATATCATTGCTCCAAATTATGTGAATCGG...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGGAAACACGTGGTTTTaGCCTTTTCTTCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLGNTWF*PFLLAG
Trigger: TCCAGCAAGAAGAAAAGGTCAAAACCACGTGTTTCC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCTGTCCTCAAGTCAGCTaGATCATTGTAGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLCPQVS*IIVVWT
Trigger: AGTCCAGACTACAATGATTCAGCTGACTTGAGGACA...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAATCCATTCACATTATTaGGGGCAGCTGAAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVIHSHY*GQLKVP
Trigger: GGGCACTTTCAGCTGCCCTCAATAATGTGAATGGAT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCCCTGAGGTATCCTATTaGGTCAGATTCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLPEVSY*VRFFSG
Trigger: TCCAGAGAAGAATCTGACTCAATAGGATACCTCAGG...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTGGTATTATCTCTGGCTaGCTTGAAAACTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFGIISG*LENWQF
Trigger: GAATTGCCAGTTTTCAAGTCAGCCAGAGATAATACC...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCAAAGTGGTGACAGTCTaGATGTTCACCATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLKVVTV*MFTIAE
Trigger: CTCTGCTATGGTGAACATCCAGACTGTCACCACTTT...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAAGAGGGATTGGACTGTaGCCTTTCTCCTTTACCATC +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVRGIGL*PFSFTI
Trigger: GATGGTAAAGGAGAAAGGCCACAGTCCAATCCCTCT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGGCAGACAGAAAGGCTaGGGAACCAAAAATTTTATA +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIGRQKG*GTKNFI
Trigger: TATAAAATTTTTGGTTCCTCAGCCTTTCTGTCTGCC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTAGTAATTTCAGGATTTaGGTTCCCTATCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFSNFRI*VPYLKA
Trigger: TGCCTTCAGATAGGGAACTCAAATCCTGAAATTACT...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTATAAGGATTGATACATaGACAGCAAGGGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIIRIDT*TARVRE
Trigger: TTCTCTCACCCTTGCTGTGCATGTATCAATCCTTAT...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTGTTTGGCTCTTTCACTaGATGCTACAGACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFVWLFH*MLQTVK
Trigger: TTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAAC...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACATATGGAAAAGGGATaGTTGTATACGGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVHMEKG*LYTVWL
Trigger: GAGCCAAACCGTATACAATCATCCCTTTTCCATATG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAAACCATCGTCTGCTGTaGATCACTTTACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVNHRLL*ITLPFE
Trigger: CTCAAAAGGTAAAGTGATTCACAGCAGACGATGGTT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTACCAAAAATTTTATATaGTGGGCACACAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFTKNFI*WAHNCS
Trigger: TGAGCAGTTGTGTGCCCAGCATATAAAATTTTTGGT...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTATTGACCTTTTCTTCTTaGTGGAGTCAAGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVLTFSS*WSQGYR
Trigger: TCTGTAGCCTTGACTCCAGCAAGAAGAAAAGGTCAA...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR GCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCAAGTTTGAGAAATCATaGATAGTTGCAGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLKFEKS*IVAEVP
Trigger: AGGGACCTCTGCAACTATGCATGATTTCTCAAACTT...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACTGGCCTATTTAAACTaGACAGTGACAAGTACATCG +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVLAYLN*TVTSTS
Trigger: CGATGTACTTGTCACTGTCCAGTTTAAATAGGCCAG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACTGGAGGTCTTTCTCTaGCTTCTAACAATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVLEVFL*LLTIKG
Trigger: TCCTTTTATTGTTAGAAGTCAGAGAAAGACCTCCAG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCATTTGTCAAGTTCCATaGGCACATCTATTTGGATTG +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLICQVP*AHLFGL
Trigger: CAATCCAAATAGATGTGCTCATGGAACTTGACAAAT...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGCTATGGTTACATCATaGGTTTCACACGTCAAATTT +
Preference number: 4 (lower is better)
Translates to: SQTETVSIQILHLTFTCLAMVTS*VSHVKF
Trigger: AAATTTGACGTGTGAAACCCATGATGTAACCATAGC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAGAATTTCTCCTGCTATaGTTACATCATGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVEFLLL*LHHGFH
Trigger: GTGAAACCCATGATGTAACCATAGCAGGAGAAATTC...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR TCA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTATCCAGACATGAATCTTaGAGTTTGAGAAATCATGCA +
Preference number: 4 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVSRHES*SLRNHA
Trigger: TGCATGATTTCTCAAACTTCAAGATTCATGTCTGGA...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
3UTR CAA 72 bp TATAGTAACTGGTGTAGATTTTTGGTACATACCCTTTaGCAGTGTGTACAAGTTCTTGAGCTTTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: YSNWCRFLVHTL*QCVQVLELWFL
Trigger: TAGAAACCAAAGCTCAAGAACTTGTACACACTGCAAAAGGGTATGTACCAAAAATCTACACCAGTTACTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS GCA 90 bp CACGTCTGGCTCCGCGGGCCGCGCCTAGGCCTAGAGGCCTTTCAGTaGCCAGTCCTCCGGCGGCGGGGTCGGTGGCGTCCGCAACTGCAG +
Preference number: 5 (lower is better)
Translates to: HVWLRGPRLGLEAFQ*PVLRRRGRWRPQLQ
Trigger: CTGCAGTTGCGGACGCCACCGACCCCGCCGCCGGAGGACTGGGCACTGAAAGGCCTCTAGGCCTAGGCGCGGCCCGCGGAGCCAGACGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS GCA 90 bp TTCAGTGCCCAGTCCTCCGGCGGCGGGGTCGGTGGCGTCCGCAACTaGAGGAGCAGCGATAGGGGCGACTGCTCCGGAATCCCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: FSAQSSGGGVGGVRN*RSSDRGDCSGIPSP
Trigger: AGGACTTGGGATTCCGGAGCAGTCGCCCCTATCGCTGCTCCTGCAGTTGCGGACGCCACCGACCCCGCCGCCGGAGGACTGGGCACTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS TCA 90 bp AGGGAGCAAAGCGGGAGGCGGCACGCTCCTTTGTCTTCCACTGGCTaGATGCCAAAATCCTTCACGCTACCAGTCTCTGCGAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: REQSGRRHAPLSSTG*MPKSFTLPVSANSR
Trigger: CCTGGAGTTCGCAGAGACTGGTAGCGTGAAGGATTTTGGCATTCAGCCAGTGGAAGACAAAGGAGCGTGCCGCCTCCCGCTTTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CCA 90 bp GGGAAGGGAGCAAAGCGGGAGGCGGCACGCTCCTTTGTCTTCCACTaGCTGAATGCCAAAATCCTTCACGCTACCAGTCTCTGCGAACTC +
Preference number: 5 (lower is better)
Translates to: GKGAKREAARSFVFH*LNAKILHATSLCEL
Trigger: GAGTTCGCAGAGACTGGTAGCGTGAAGGATTTTGGCATTCAGCCAGTGGAAGACAAAGGAGCGTGCCGCCTCCCGCTTTGCTCCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGTTTGACCTTTTCTTCTaGCTGGAGTCAAGGCTACAG +
Preference number: 5 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLFDLFF*LESRLQ
Trigger: CTGTAGCCTTGACTCCAGCAAGAAGAAAAGGTCAAA...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp CACTGCATGGCCCGCAGGCTGTGCAGCTCCTCCTGCCCAGGGCTTCAGAGCTTGTTTGGAGCAATGATATaGATTGCATTTTCTGTGCGT +
Preference number: 5 (lower is better)
Translates to: HCMARRLCSSSCPGLQSLFGAMI*IAFSVR
Trigger: ACGCACAGAAAATGCAATCAATATCATTGCTCCAAA...CAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACCCACTTCCAAGACATaGTTAGGAAGTAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAPTSKT*LGSRPE
Trigger: CTCTGGCCTACTTCCTAACAATGTCTTGGAAGTGGG...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGGAGGCTACTGCCCTATaGGTAGAGGGGCCAGAAACA +
Preference number: 5 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGEATAL*VEGPET
Trigger: TGTTTCTGGCCCCTCTACCAATAGGGCAGTAGCCTC...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTTTGACGTTTCCCGGGTaGCGGGCCTTTCAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQILTFPG*RAFQLR
Trigger: GCGCAGCTGAAAGGCCCGCAACCCGGGAAACGTCAA...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGCCTATGCCACCAGGTaGGAGGGCAAGGAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIAYATR*EGKEEG
Trigger: GCCCTCTTCCTTGCCCTCCAACCTGGTGGCATAGGC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TCTCAAATCACCACGTTGGCCCTGGCCTATTTAAACTGGACAGTGACAAGTACACCCTCTGGGCACCTGTaGGACCAAGCCCACCTTATA +
Preference number: 5 (lower is better)
Translates to: SQITTLALAYLNWTVTSTPSGHL*DQAHLI
Trigger: TATAAGGTGGGCTTGGTCCAACAGGTGCCCAGAGGG...TGTACTTGTCACTGTCCAGTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCACCCATTGTCAAGTATTaGGTAAAGCAGGGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQAPIVKY*VKQGSC
Trigger: GCAAGACCCCTGCTTTACCAAATACTTGACAATGGG...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCATTGTTAGTATCCAGGTaGGCCAACGAAATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQALLVSR*ANEISS
Trigger: GGAGGAAATTTCGTTGGCCAACCTGGATACTAACAA...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGCCAGGGCTTCAGAGCTaGCTCCAGGTAATACACTTT +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRPGLQS*LQVIHF
Trigger: AAAGTGTATTACCTGGAGCAAGCTCTGAAGCCCTGG...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGCTGTCCAAGAAGCCCTaGACATCAGGCAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRLSKKP*TSGRQK
Trigger: TTTCTGTCTGCCTGATGTCAAGGGCTTCTTGGACAG...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGAACCAAGTTGTCCATTaGCCAAGCCTATGCCACCAG +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRNQVVH*PSLCHQ
Trigger: CTGGTGGCATAGGCTTGGCAAATGGACAACTTGGTT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GGGGGCACTACAGGATCTTGCGCACATCCTGGTGTGTTTAGAGATCAACAGGCAAATCCATTCACATTATaGAGGGCAGCTGAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: GGTTGSCAHPGVFRDQQANPFTL*RAAESA
Trigger: GGCACTTTCAGCTGCCCTCAATAATGTGAATGGATT...TGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGGGGAAACACGTGGTTTaGACCTTTTCTTCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRGKHVV*TFSSCW
Trigger: CCAGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCC...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGAAAGGACTGCTCCTGTaGTCAAGAAGATCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRKGLLL*SRRSKG
Trigger: CCCTTTGGATCTTCTTGACAACAGGAGCAGTCCTTT...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CCA 90 bp TTAGCTTACTCCTCGAAGCCACAGGACCAGTCTATGTTATTGTCCTaGCCACTTTCAGACTCTCATTTTGCAGCTACTGGAATTCCGGAG +
Preference number: 5 (lower is better)
Translates to: LAYSSKPQDQSMLLS*PLSDSHFAATGIPE
Trigger: CTCCGGAATTCCAGTAGCTGCAAAATGAGAGTCTGAAAGTGGCCAGGACAATAACATAGACTGGTCCTGTGGCTTCGAGGAGTAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGGGCACTACAGGATCTaGCGCACATCCTGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIGHYRI*RTSWCV
Trigger: AACACACCAGGATGTGCGCAAGATCCTGTAGTGCCC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCTGAAGGCAGAGGGATaGGACTGTGGCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFLKAEG*DCGLSP
Trigger: AGGAGAAAGGCCACAGTCCAATCCCTCTGCCTTCAG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGTCCTTCTGTTTGTTTaGACGTTTCCCGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIVLLFV*TFPGLR
Trigger: CCGCAACCCGGGAAACGTCAAAACAAACAGAAGGAC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCGCGATGGCCTCTAGCTaGTTAGTATCCAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SQTETVSIQILHLTFTCLAMASS*LVSRLA
Trigger: GGCCAACCTGGATACTAACAAGCTAGAGGCCATCGC...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGATGATTGTATACGGTTaGGCTCTTTCACTGGATGCT +
Preference number: 5 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGMIVYG*ALSLDA
Trigger: AGCATCCAGTGAAAGAGCCAAACCGTATACAATCAT...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ATCCCCCTGTGTGTCAATCAGCCTTTACTGCTCTTCTACTTAGGTCCTAACCGGGTTAGTATCCAGATCTaGCACCTGACATTTACTTGT +
Preference number: 5 (lower is better)
Translates to: IPLCVNQPLLLFYLGPNRVSIQI*HLTFTC
Trigger: ACAAGTAAATGTCAGGTGCAAGATCTGGATACTAAC...CCGGTTAGGACCTAAGTAGAAGAGCAGTAAAGGCTGATTGACACACAGGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TTGAAGTTTGAGAAATCATGCATAGTTGCAGAGGTCCCTGCTACCTCCCCAGGGTTATCTCTGGCTGACTaGAAAACTGGCAATTCGTTA +
Preference number: 5 (lower is better)
Translates to: LKFEKSCIVAEVPATSPGLSLAD*KTGNSL
Trigger: TAACGAATTGCCAGTTTTCAAGTCAGCCAGAGATAA...CCCTGGGGAGGTAGCAGGGACCTCTGCAACTATGCATGATTTCTCAAACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACGGTTTGGCTCTTTCACTGGATGCTACAGACAGTTAAATTTGCAGGCCAAATTGACCAGTCTATGTTATaGTCCTGGCCACTTTCAGAC +
Preference number: 5 (lower is better)
Translates to: TVWLFHWMLQTVKFAGQIDQSML*SWPLSD
Trigger: GTCTGAAAGTGGCCAGGACAATAACATAGACTGGTC...AATTTGGCCTGCAAATTTAACTGTCTGTAGCATCCAGTGAAAGAGCCAAACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCTCTCAAATCACCACGTaGGCCCTGGCCTATTTAAAC +
Preference number: 5 (lower is better)
Translates to: SQTETVSIQILHLTFTCLSQITT*ALAYLN
Trigger: GTTTAAATAGGCCAGGGCCAACGTGGTGATTTGAGA...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTATTTCAGACTCTCATTTaGCAGCTACTGGAATTCCGG +
Preference number: 5 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVFQTLI*QLLEFR
Trigger: CCGGAATTCCAGTAGCTGCAAAATGAGAGTCTGAAA...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTTTCATTGCCCTAACGTaGTTCATAAGCATCATGGAT +
Preference number: 5 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFFIALT*FISIMD
Trigger: ATCCATGATGCTTATGAACAACGTTAGGGCAATGAA...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTAGATACATAATAGGATaGCAGGGTGATCAATACACA +
Preference number: 5 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFRYIIG*QGDQYT
Trigger: TGTGTATTGATCACCCTGCAATCCTATTATGTATCT...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTAAATTTGCAGGCCAAATaGAGAAACAAGGTTGGACAG +
Preference number: 5 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVNLQAK*RNKVGQ
Trigger: CTGTCCAACCTTGTTTCTCAATTTGGCCTGCAAATT...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp ACCCCTTTATACTTCATAAACCCTCGCTCAGGGAATAAAGTGGAGGGTAGTTTTCAACAGGTGGAAATATaGGGATATTGGTTACTTTTG +
Preference number: 5 (lower is better)
Translates to: TPLYFINPRSGNKVEGSFQQVEI*GYWLLL
Trigger: CAAAAGTAACCAATATCCCAATATTTCCACCTGTTG...AAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp TCCCAAACTGAAACTGTTAGTATCCAGATCTTGCACCTGACATTTACTTGTCTCCTTCTCTCCATTTACTaGGGATTTTCCCAACATATT +
Preference number: 5 (lower is better)
Translates to: SQTETVSIQILHLTFTCLLLSIY*GFSQHI
Trigger: AATATGTTGGGAAAATCCCAAGTAAATGGAGAGAAG...GAGACAAGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS-3UTR CAA 90 bp GTAACAGTTCCAAGGCCCAAACTCTATGGTTTCCTTAATCCTCTAAAGTATGTACATGAGCACATCTATTaGGATTGTAATACAGATTGC +
Preference number: 5 (lower is better)
Translates to: VTVPRPKLYGFLNPLKYVHEHIY*DCNTDC
Trigger: GCAATCTGTATTACAATCCAAATAGATGTGCTCATG...TACATACTTTAGAGGATTAAGGAAACCATAGAGTTTGGGCCTTGGAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS GCA 72 bp CTCCGCGGGCCGCGCCTAGGCCTAGAGGCCTTTCAGTaGCCAGTCCTCCGGCGGCGGGGTCGGTGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: LRGPRLGLEAFQ*PVLRRRGRWRP
Trigger: CGGACGCCACCGACCCCGCCGCCGGAGGACTGGGCACTGAAAGGCCTCTAGGCCTAGGCGCGGCCCGCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS GCA 72 bp CAGTCCTCCGGCGGCGGGGTCGGTGGCGTCCGCAACTaGAGGAGCAGCGATAGGGGCGACTGCTCCGGAATC +
Preference number: 6 (lower is better)
Translates to: QSSGGGVGGVRN*RSSDRGDCSGI
Trigger: GATTCCGGAGCAGTCGCCCCTATCGCTGCTCCTGCAGTTGCGGACGCCACCGACCCCGCCGCCGGAGGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CAA 90 bp GCGATAGGGGCGACTGCTCCGGAATCCCAAGTCCTTCTGTTTGTTTaGACGTTTCCCGGGTTGCGGGCCTTTCAGCTGCGCCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: AIGATAPESQVLLFV*TFPGLRAFQLRLAQ
Trigger: CTGGGCCAGGCGCAGCTGAAAGGCCCGCAACCCGGGAAACGTCAAAACAAACAGAAGGACTTGGGATTCCGGAGCAGTCGCCCCTATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CAA 90 bp GCTCCGGAATCCCAAGTCCTTCTGTTTGTTTTGACGTTTCCCGGGTaGCGGGCCTTTCAGCTGCGCCTGGCCCAGGACTCACCGCCAAAC +
Preference number: 6 (lower is better)
Translates to: APESQVLLFVLTFPG*RAFQLRLAQDSPPN
Trigger: GTTTGGCGGTGAGTCCTGGGCCAGGCGCAGCTGAAAGGCCCGCAACCCGGGAAACGTCAAAACAAACAGAAGGACTTGGGATTCCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS GCA 72 bp GGCGTCCGCAACTGCAGGAGCAGCGATAGGGGCGACTaGTCCGGAATCCCAAGTCCTTCTGTTTGTTTTGAC +
Preference number: 6 (lower is better)
Translates to: GVRNCRSSDRGD*SGIPSPSVCFD
Trigger: GTCAAAACAAACAGAAGGACTTGGGATTCCGGAGCAGTCGCCCCTATCGCTGCTCCTGCAGTTGCGGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CAA 72 bp TCCCAAGTCCTTCTGTTTGTTTTGACGTTTCCCGGGTaGCGGGCCTTTCAGCTGCGCCTGGCCCAGGACTCA +
Preference number: 6 (lower is better)
Translates to: SQVLLFVLTFPG*RAFQLRLAQDS
Trigger: TGAGTCCTGGGCCAGGCGCAGCTGAAAGGCCCGCAACCCGGGAAACGTCAAAACAAACAGAAGGACTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CCA 72 bp TCCTCGAAGCCACAGGACCAGTCTATGTTATTGTCCTaGCCACTTTCAGACTCTCATTTTGCAGCTACTGGA +
Preference number: 6 (lower is better)
Translates to: SSKPQDQSMLLS*PLSDSHFAATG
Trigger: TCCAGTAGCTGCAAAATGAGAGTCTGAAAGTGGCCAGGACAATAACATAGACTGGTCCTGTGGCTTCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CAA 72 bp GCTTACTCCTCGAAGCCACAGGACCAGTCTATGTTATaGTCCTGGCCACTTTCAGACTCTCATTTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: AYSSKPQDQSML*SWPLSDSHFAA
Trigger: AGCTGCAAAATGAGAGTCTGAAAGTGGCCAGGACAATAACATAGACTGGTCCTGTGGCTTCGAGGAGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4
CDS CAA 90 bp TTCTACTTAGCTTACTCCTCGAAGCCACAGGACCAGTCTATGTTATaGTCCTGGCCACTTTCAGACTCTCATTTTGCAGCTACTGGAATT +
Preference number: 6 (lower is better)
Translates to: FYLAYSSKPQDQSML*SWPLSDSHFAATGI
Trigger: AATTCCAGTAGCTGCAAAATGAGAGTCTGAAAGTGGCCAGGACAATAACATAGACTGGTCCTGTGGCTTCGAGGAGTAAGCTAAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519948.4