Pregenerated sensors for ATXN7L3 (Homo sapiens)
Ensembl gene IDs: ENSG00000087152Ensembl transcript IDs: ENST00000389384.8, ENST00000454077.6, ENST00000587097.6, ENST00000589607.5, ENST00000589805.1, ENST00000590169.5, ENST00000591295.5, ENST00000591807.1
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCACCCATTCACATTGCTaGGGGCGGCCGAGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QNHPSGRAEFQTGHCSPITHSHC*GRPRQA Trigger: GGCCTGCCTCGGCCGCCCTCAGCAATGTGAATGGGT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR TCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATACCCATTCACATTGCTaGGGGCGGCCGAGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDTHSHC*GRPRQA Trigger: GGCCTGCCTCGGCCGCCCTCAGCAATGTGAATGGGT...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCGTGCCTGCCTACCCCTaGGACTGGGGGCATTTGATA | + |
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Preference number: 2 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIVPAYP*DWGHLI Trigger: TATCAAATGCCCCCAGTCCCAGGGGTAGGCAGGCAC...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCACGCCGAGGAGTCGTaGTCCATTGCAGAGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIHAEES*SIAEDF Trigger: AAAGTCCTCTGCAATGGAGCACGACTCCTCGGCGTG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCTGGGATGGCTCCTCTTaGGAAGAGGGTAGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIWDGSS*EEGRGH Trigger: ATGTCCCCTACCCTCTTCCCAAGAGGAGCCATCCCA...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATATCCTCCTCTCCCTCTaGCCTCCTCTCGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDILLSL*PPLGGR Trigger: TCTCCCTCCGAGAGGAGGCCAGAGGGAGAGGAGGAT...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCAGCAGCCGTCCATTTaGCAGGCTATGCCACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEQQPSI*QAMPPG Trigger: CCCAGGTGGCATAGCCTGGCAAATGGACGGCTGCTG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCACGCCGAGGAGTCGTaGTCCATTGCAGAGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: TIRTTPAGERSSRQGIAAHAEES*SIAEDF Trigger: AAAGTCCTCTGCAATGGAGCACGACTCCTCGGCGTG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATGTGCCTGCCTACCCCTaGGACTGGGGGCATTTGATA | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDVPAYP*DWGHLI Trigger: TATCAAATGCCCCCAGTCCCAGGGGTAGGCAGGCAC...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR TCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAACCCATTCACATTGCTaGGGGCGGCCGAGGCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRTHSHC*GRPRQA Trigger: GGCCTGCCTCGGCCGCCCTCAGCAATGTGAATGGGT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR TCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCATTTGCAACCAGGCATaGGCCACAATCAGAACCACC | + |
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Preference number: 2 (lower is better) Translates to: LHLEAARGLLRSSSPSGLICNQA*ATIRTT Trigger: GGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAAT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCACGCCGAGGAGTCGTaGTCCATTGCAGAGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDHAEES*SIAEDF Trigger: AAAGTCCTCTGCAATGGAGCACGACTCCTCGGCGTG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATTGGGATGGCTCCTCTTaGGAAGAGGGTAGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDWDGSS*EEGRGH Trigger: ATGTCCCCTACCCTCTTCCCAAGAGGAGCCATCCCA...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCAGGGGGAGGAATTCTaGCACTTCTCCCTCTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEQGEEF*HFSLFL Trigger: TAGGAAGAGGGAGAAGTGTCAGAATTCCTCCCCCTG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGACAGCAGCCGTCCATTTaGCAGGCTATGCCACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRQQPSI*QAMPPG Trigger: CCCAGGTGGCATAGCCTGGCAAATGGACGGCTGCTG...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCATTTGATAAGATTCTaGACACAGACAGGACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIHLIRF*TQTGHA Trigger: GGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCATTTGATAAGATTCTaGACACAGACAGGACATGCC | + |
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Preference number: 2 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDHLIRF*TQTGHA Trigger: GGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR GCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCATTTGATAAGATTCTaGACACAGACAGGACATGCC | + |
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Preference number: 2 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEHLIRF*TQTGHA Trigger: GGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCAGGAGTCGTGCTCCATaGCAGAGGACTTTGACACCC | + |
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Preference number: 3 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIRSRAP*QRTLTP Trigger: GGGTGTCAAAGTCCTCTGCAATGGAGCACGACTCCT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCCGGACCCATTCACATaGCTGAGGGCGGCCGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEPDPFT*LRAAEA Trigger: TGCCTCGGCCGCCCTCAGCAATGTGAATGGGTCCGG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGGAAACAGGGCACGCTTaGGAGGCAGGAGCGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEETGHA*EAGALR Trigger: TCTCAGCGCTCCTGCCTCCAAAGCGTGCCCTGTTTC...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGAGGAGTCGTGCTCCATaGCAGAGGACTTTGACACCC | + |
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Preference number: 3 (lower is better) Translates to: NLQPGMSHNQNHPSGRAERSRAP*QRTLTP Trigger: GGGTGTCAAAGTCCTCTGCAATGGAGCACGACTCCT...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCGGGTTAAAAACCAATTaGCAACCAGGCATGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LHLEAARGLLRSSSPSGLGLKTN*QPGMSH Trigger: GTGGCTCATGCCTGGTTGCAAATTGGTTTTTAACCC...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCAGGAGTCGTGCTCCATaGCAGAGGACTTTGACACCC | + |
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Preference number: 3 (lower is better) Translates to: LGAFDKILHTDRTCPALPRSRAP*QRTLTP Trigger: GGGTGTCAAAGTCCTCTGCAATGGAGCACGACTCCT...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGGGCGGCAACACGGCTaGACACACGGGGGTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAGRQHG*THGGGG Trigger: ACCCCCACCCCCGTGTGTGCAGCCGTGTTGCCGCCC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCAGCGGGAGGCGGCAATaGTGCGACTGCAATTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPISGRRQ*CDCNWG Trigger: GCCCCAATTGCAGTCGCAGCATTGCCGCCTCCCGCT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCGGAGCTCTCGACCTCTaGAAGGACAGCCGAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLGALDL*KDSRGP Trigger: GGGCCCTCGGCTGTCCTTCCAGAGGTCGAGAGCTCC...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCACCCATTCACATTGCTaGGGGCGGCCGAGGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAATHSHC*GRPRQA Trigger: GGCCTGCCTCGGCCGCCCTCAGCAATGTGAATGGGT...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCCGGCTAGAGGCCTGCTaGGATCCTCCTCTCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLRLEAC*DPPLPL Trigger: CAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCG...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCAGGGGGCTCTGCCCTaGGGGCGGGCCAAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDQGALP*GRAKEQ Trigger: TTGTTCCTTGGCCCGCCCTCAGGGCAGAGCCCCCTG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGCGTGGTTAGCAGGCTaGGAAGCTCCTCCGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAAWLAG*EAPPAP Trigger: TGGGGCCGGAGGAGCTTCGCAGCCTGCTAACCACGC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCAGCAGCCGTCCATTTaGCAGGCTATGCCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIQQPSI*QAMPPG Trigger: CCCAGGTGGCATAGCCTGGCAAATGGACGGCTGCTG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCGCCCACTCCCCAGACTaGATCTGGAAGCGGCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIAHSPD*IWKRLE Trigger: CTCTAGCCGCTTCCAGATGCAGTCTGGGGAGTGGGC...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCATCCTCCTCTCCCTCTaGCCTCCTCTCGGAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIILLSL*PPLGGR Trigger: TCTCCCTCCGAGAGGAGGCCAGAGGGAGAGGAGGAT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCCTCTGCTCATCTGTGTaGTGTGGGCAGCGCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLLCSSV*CGQRRD Trigger: GTCCCTGCGCTGCCCACAGCACACAGATGAGCAGAG...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCGTACGGTTCGCCTCTaGTCATCTGTGTGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIRTVRL*SSVCCG Trigger: CCCACAGCACACAGATGAGCAGAGGCGAACCGTACG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCCCAAAGCTCAGTCCTaGCATCAGGGTCTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIPKAQS*HQGLSL Trigger: GAGGGAGAGACCCTGATGCCAGGACTGAGCTTTGGG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATGGAGCTCTCGACCTCTaGAAGGACAGCCGAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDGALDL*KDSRGP Trigger: GGGCCCTCGGCTGTCCTTCCAGAGGTCGAGAGCTCC...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCACACAGGATACAGGGTaGACGACACCTAGCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPITQDTG*TTPSRG Trigger: ACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCGGCTAGAGGCCTGCTaGGATCCTCCTCTCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDRLEAC*DPPLPL Trigger: CAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCAGGGGGCTCTGCCCTaGGGGCGGGCCAAGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPQGALP*GRAKEQ Trigger: TTGTTCCTTGGCCCGCCCTCAGGGCAGAGCCCCCTG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCGGGAGGCGGCAATGCTaGGACTGCAATTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLGRRQC*DCNWGK Trigger: TTTGCCCCAATTGCAGTCGCAGCATTGCCGCCTCCC...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCTCTGCTCATCTGTGTaGTGTGGGCAGCGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAALCSSV*CGQRRD Trigger: GTCCCTGCGCTGCCCACAGCACACAGATGAGCAGAG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGCCCACTCCCCAGACTaGATCTGGAAGCGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAAHSPD*IWKRLE Trigger: CTCTAGCCGCTTCCAGATGCAGTCTGGGGAGTGGGC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCTGGCAATCCGGCGGTTaGCGATTCGGCTGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAWQSGG*RFGCCS Trigger: GGAACAGCAGCCGAATCGCCAACCGCCGGATTGCCA...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCACACAGGATACAGGGTaGACGACACCTAGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLTQDTG*TTPSRG Trigger: ACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCGGCTAGAGGCCTGCTaGGATCCTCCTCTCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAERLEAC*DPPLPL Trigger: CAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCCCTCCCCACCTCGCTaGCCAAAGCTCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPPSPPR*PKLSPG Trigger: GCCAGGACTGAGCTTTGGGCAGCGAGGTGGGGAGGG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000389384.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCGGCAATGCTGCGACTaGAATTGGGGCAAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIRQCCD*NWGKHT Trigger: AGTGTGTTTGCCCCAATTGCAGTCGCAGCATTGCCG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR GCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGAGCGGGAGGCGGCAATaGTGCGACTGCAATTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAESGRRQ*CDCNWG Trigger: GCCCCAATTGCAGTCGCAGCATTGCCGCCTCCCGCT...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGCGTGGTTAGCAGGCTaGGAAGCTCCTCCGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPAWLAG*EAPPAP Trigger: TGGGGCCGGAGGAGCTTCGCAGCCTGCTAACCACGC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCGTACGGTTCGCCTCTaGTCATCTGTGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAARTVRL*SSVCCG Trigger: CCCACAGCACACAGATGAGCAGAGGCGAACCGTACG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR GCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCAGCAGCCGTCCATTTaGCAGGCTATGCCACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDQQPSI*QAMPPG Trigger: CCCAGGTGGCATAGCCTGGCAAATGGACGGCTGCTG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCCACGCCGAGGAGTCGTaGTCCATTGCAGAGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLHAEES*SIAEDF Trigger: AAAGTCCTCTGCAATGGAGCACGACTCCTCGGCGTG...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCTGCACACACGGGGGTaGGGGTGTTGTTGTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDLHTRG*GCCCES Trigger: GGACTCACAACAACACCCCCACCCCCGTGTGTGCAG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389384.8 |
||
| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATTGGCAATCCGGCGGTTaGCGATTCGGCTGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDWQSGG*RFGCCS Trigger: GGAACAGCAGCCGAATCGCCAACCGCCGGATTGCCA...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCTCACCCCACATTGCGTaGTTAGCAGGCTGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLSPHIA*LAGCEA Trigger: AGCTTCGCAGCCTGCTAACCACGCAATGTGGGGTGA...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR CCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGTGCCTGCCTACCCCTaGGACTGGGGGCATTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAVPAYP*DWGHLI Trigger: TATCAAATGCCCCCAGTCCCAGGGGTAGGCAGGCAC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCTGGGATGGCTCCTCTTaGGAAGAGGGTAGGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLWDGSS*EEGRGH Trigger: ATGTCCCCTACCCTCTTCCCAAGAGGAGCCATCCCA...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCATTTGCAACCAGGCATaGGCCACAATCAGAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIICNQA*ATIRTT Trigger: GGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAAT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATGGGAGGCGGCAATGCTaGGACTGCAATTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDGRRQC*DCNWGK Trigger: TTTGCCCCAATTGCAGTCGCAGCATTGCCGCCTCCC...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCCTGAGCTCAGGCCCTaGACTCCACTGCCAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDPELRP*TPLPIR Trigger: TCTGATTGGCAGTGGAGTCCAGGGCCTGAGCTCAGG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCATGTCCAAGCCCGGCTaGTCCACGATCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLMSKPG*STISKS Trigger: GGATTTTGAGATCGTGGACCAGCCGGGCTTGGACAT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCGGCAATGCTGCGACTaGAATTGGGGCAAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAARQCCD*NWGKHT Trigger: AGTGTGTTTGCCCCAATTGCAGTCGCAGCATTGCCG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCTCTGCTCATCTGTGTaGTGTGGGCAGCGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPLCSSV*CGQRRD Trigger: GTCCCTGCGCTGCCCACAGCACACAGATGAGCAGAG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCTGCTGCGACTGCAATTaGGGCAAACACACTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAACCDCN*GKHTPC Trigger: GCAAGGAGTGTGTTTGCCCCAATTGCAGTCGCAGCA...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATTCACCCCACATTGCGTaGTTAGCAGGCTGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDSPHIA*LAGCEA Trigger: AGCTTCGCAGCCTGCTAACCACGCAATGTGGGGTGA...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGTGACTCAGAGCTGTTaGTACCTAGACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAVTQSC*YLDPIP Trigger: AGGGATGGGGTCTAGGTACCAACAGCTCTGAGTCAC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCATCCTCCTCTCCCTCTaGCCTCCTCTCGGAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPILLSL*PPLGGR Trigger: TCTCCCTCCGAGAGGAGGCCAGAGGGAGAGGAGGAT...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCAAAAGCCACCGGCCATaGAAATTAGTACAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIKSHRP*KLVQNP Trigger: GGGGTTCTGTACTAATTTCCATGGCCGGTGGCTTTT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR TCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGGTGGGGGTGTTGTTGTaGGTCCAAGGCACCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEVGVLL*VQGTSE Trigger: TTCAGAGGTGCCTTGGACTCACAACAACACCCCCAC...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR TCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGTGGAGACGGCGCTCTaGCTGCTCATAGCACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRVETAL*LLIAQR Trigger: CCGCTGTGCTATGAGCAGTCAGAGCGCCGTCTCCAC...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGGCCCTGGACTCCACTaGCAATCAGAGTCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPGPGLH*QSESGS Trigger: AGACCCAGACTCTGATTGGCAGTGGAGTCCAGGGCC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCGTACGGTTCGCCTCTaGTCATCTGTGTGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPRTVRL*SSVCCG Trigger: CCCACAGCACACAGATGAGCAGAGGCGAACCGTACG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATGTGACTCAGAGCTGTTaGTACCTAGACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDVTQSC*YLDPIP Trigger: AGGGATGGGGTCTAGGTACCAACAGCTCTGAGTCAC...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGTGCCTGCCTACCCCTaGGACTGGGGGCATTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPVPAYP*DWGHLI Trigger: TATCAAATGCCCCCAGTCCCAGGGGTAGGCAGGCAC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCATCACCCCACATTGCTaGAAGAGGAATATAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIITPHC*KRNISV Trigger: CACGCTTATATTCCTCTTCCAGCAATGTGGGGTGAT...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCTCTCAAAATCCTTCATaGTATCAGGGTCCGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLSQNPS*YQGPCR Trigger: ACGACACGGACCCTGATAGCATGAAGGATTTTGAGA...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR GCA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCGAAATCACCCCACATTaGTGGAAGAGGAATATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIEITPH*WKRNIS Trigger: GCTTATATTCCTCTTCCAGCAATGTGGGGTGATTTC...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGATGTCCAAGCCCGGCTaGTCCACGATCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEMSKPG*STISKS Trigger: GGATTTTGAGATCGTGGACCAGCCGGGCTTGGACAT...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR CCA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCATCTTCGAGGGGAATTaGGGTTCTTGTCTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLEAARGLLRSSSPSGLIFEGN*GSCLTF Trigger: GAAAGTCAGACAAGAACCCCAATTCCCCTCGAAGAT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389384.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGGCTTCTTCTTCTTGTTaGAACCTAGGCCGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEASSSC*NLGRRQ Trigger: CTGCCTCCGGCCTAGGTTCCAACAAGAAGAAGAAGC...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCAGGGGGAGGAATTCTaGCACTTCTCCCTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPQGEEF*HFSLFL Trigger: TAGGAAGAGGGAGAAGTGTCAGAATTCCTCCCCCTG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGTGACTCAGAGCTGTTaGTACCTAGACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPVTQSC*YLDPIP Trigger: AGGGATGGGGTCTAGGTACCAACAGCTCTGAGTCAC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGCTTCTTCTTCTTGTTaGAACCTAGGCCGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPASSSC*NLGRRQ Trigger: CTGCCTCCGGCCTAGGTTCCAACAAGAAGAAGAAGC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGGGTGCCGGTGGCTTTaGCTTCTTCTTCTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPGCRWL*LLLLVG Trigger: TCCAACAAGAAGAAGAAGCCAAAGCCACCGGCACCC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAACACAGGATACAGGGTaGACGACACCTAGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRTQDTG*TTPSRG Trigger: ACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCATTTGATAAGATTCTaGACACAGACAGGACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIRTTPAGERSSRQGIAAHLIRF*TQTGHA Trigger: GGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGGGGAATTGGGGTTCTaGAATGGGAGATACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPGELGF*NGRYHS Trigger: GCTATGGTATCTCCCATTCCAGAACCCCAATTCCCC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454077.6 |
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| CDS-3UTR TCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGACAGGGGGAGGAATTCTaGCACTTCTCCCTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRQGEEF*HFSLFL Trigger: TAGGAAGAGGGAGAAGTGTCAGAATTCCTCCCCCTG...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGATGCTGCGACTGCAATTaGGGCAAACACACTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRCCDCN*GKHTPC Trigger: GCAAGGAGTGTGTTTGCCCCAATTGCAGTCGCAGCA...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR CCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGGGTGCCGGTGGCTTTaGCTTCTTCTTCTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRGCRWL*LLLLVG Trigger: TCCAACAAGAAGAAGAAGCCAAAGCCACCGGCACCC...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCAAAAGCCACCGGCCATaGAAATTAGTACAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPKSHRP*KLVQNP Trigger: GGGGTTCTGTACTAATTTCCATGGCCGGTGGCTTTT...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCATCTTCGAGGGGAATTaGGGTTCTGGAATGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPIFEGN*GSGMGD Trigger: ATCTCCCATTCCAGAACCCCAATTCCCCTCGAAGAT...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454077.6 |
||
| CDS-3UTR TCA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGATTGGGGTTCTTGTCTaGCTTTCTCTTCTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEIGVLV*LSLLGF Trigger: AAAGCCAAGAAGAGAAAGTCAGACAAGAACCCCAAT...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389384.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAATTTGCAACCAGGCATaGGCCACAATCAGAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRICNQA*ATIRTT Trigger: GGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAAT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCATTTGATAAGATTCTaGACACAGACAGGACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFDKILHTDRTCPALPHLIRF*TQTGHA Trigger: GGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAAAAAGCCACCGGCCATaGAAATTAGTACAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRKSHRP*KLVQNP Trigger: GGGGTTCTGTACTAATTTCCATGGCCGGTGGCTTTT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR GCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGATCTCAAAATCCTTCATaGTATCAGGGTCCGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRSQNPS*YQGPCR Trigger: ACGACACGGACCCTGATAGCATGAAGGATTTTGAGA...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR GCA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAACTTATTCATATTGTTaGTATTGGCAATCCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRTYSYC*YWQSGG Trigger: ACCGCCGGATTGCCAATAGCAACAATATGAATAAGT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS GCA 90 bp | CAGCCTCTCAGGGCCGCGTCCTCCGGCGGCGGCGACGGCGGCGGCTaGTCCGGAGCCCCATGTCCGTCGGTCCGTCCTCGCCTCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPLRAASSGGGDGGG*SGAPCPSVRPRLSP Trigger: CGGGGAGAGGCGAGGACGGACCGACGGACATGGGGCTCCGGAGCAGCCGCCGCCGTCGCCGCCGCCGGAGGACGCGGCCCTGAGAGGCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587097.6 |
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| CDS-3UTR CAA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCCCGGACCCATTCACATaGCTGAGGGCGGCCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIPDPFT*LRAAEA Trigger: TGCCTCGGCCGCCCTCAGCAATGTGAATGGGTCCGG...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS CCA 90 bp | CTGCTCATAGCACAGCGGGCGGCAACACGGCTGCACACACGGGGGTaGGGGTGTTGTTGTGAGTCCAAGGCACCTCTGAATGCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLIAQRAATRLHTRG*GCCCESKAPLNAAT Trigger: GGTGGCCGCATTCAGAGGTGCCTTGGACTCACAACAACACCCCCACCCCCGTGTGTGCAGCCGTGTTGCCGCCCGCTGTGCTATGAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389384.8 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCGGACCCATTCACATaGCTGAGGGCGGCCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAAPDPFT*LRAAEA Trigger: TGCCTCGGCCGCCCTCAGCAATGTGAATGGGTCCGG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCGAAACAGGGCACGCTTaGGAGGCAGGAGCGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIETGHA*EAGALR Trigger: TCTCAGCGCTCCTGCCTCCAAAGCGTGCCCTGTTTC...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGGCAGCGCAGGGACCTaGTGCACATCTTCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAAGSAGT*CTSSWC Trigger: ACACCAAGAAGATGTGCACAAGGTCCCTGCGCTGCC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCGTGACTCAGAGCTGTaGGTACCTAGACCCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAARDSEL*VPRPHP Trigger: GGGATGGGGTCTAGGTACCAACAGCTCTGAGTCACG...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCGGCTTCTTCTTCTTGTaGGAACCTAGGCCGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHLEAARGLLRSSSPSGLGFFFL*EPRPEA Trigger: TGCCTCCGGCCTAGGTTCCAACAAGAAGAAGAAGCC...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGGGGTGCCGGTGGCTTaGGCTTCTTCTTCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAAGVPVA*ASSSCW Trigger: CCAACAAGAAGAAGAAGCCAAAGCCACCGGCACCCC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCAGGAGTCGTGCTCCATaGCAGAGGACTTTGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LHLEAARGLLRSSSPSGLRSRAP*QRTLTP Trigger: GGGTGTCAAAGTCCTCTGCAATGGAGCACGACTCCT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCTTTGGCTTCTTCTTCTaGTTGGAACCTAGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QNHPSGRAEFQTGHCSPIFGFFF*LEPRPE Trigger: CTCCGGCCTAGGTTCCAACAAGAAGAAGAAGCCAAA...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCAGGAGTCGTGCTCCATaGCAGAGGACTTTGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAARSRAP*QRTLTP Trigger: GGGTGTCAAAGTCCTCTGCAATGGAGCACGACTCCT...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCATGCTGCGACTGCAATaGGGGCAAACACACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAAMLRLQ*GQTHSL Trigger: CAAGGAGTGTGTTTGCCCCAATTGCAGTCGCAGCAT...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CAA 90 bp | CAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCCCATCTCTGACTTTCTCTTCTaGGCTTTCTTCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNHPSGRAEFQTGHCSPISDFLF*AFFSEP Trigger: TGGCTCGGAGAAGAAAGCCAAGAAGAGAAAGTCAGA...GATGGGGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGGGCAGCGCAGGGACCTaGTGCACATCTTCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEGSAGT*CTSSWC Trigger: ACACCAAGAAGATGTGCACAAGGTCCCTGCGCTGCC...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGCGTGACTCAGAGCTGTaGGTACCTAGACCCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: NLQPGMSHNQNHPSGRAERDSEL*VPRPHP Trigger: GGGATGGGGTCTAGGTACCAACAGCTCTGAGTCACG...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGAAACAGGGCACGCTTaGGAGGCAGGAGCGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGAFDKILHTDRTCPALPETGHA*EAGALR Trigger: TCTCAGCGCTCCTGCCTCCAAAGCGTGCCCTGTTTC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGATCTTCGAGGGGAATaGGGGTTCTGGAATGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAADLRGE*GFWNGR Trigger: TCTCCCATTCCAGAACCCCAATTCCCCTCGAAGATC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000454077.6 |
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| CDS-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCGTGACTCAGAGCTGTaGGTACCTAGACCCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGAFDKILHTDRTCPALPRDSEL*VPRPHP Trigger: GGGATGGGGTCTAGGTACCAACAGCTCTGAGTCACG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | ACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTCCAGACAGGGCATTGCAGCCGATCTTCGAGGGGAATaGGGGTTCTTGTCTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TIRTTPAGERSSRQGIAADLRGE*GFLSDF Trigger: AAAGTCAGACAAGAACCCCAATTCCCCTCGAAGATC...GGCTGCAATGCCCTGTCTGGAACTCCGCTCTCCCGCTGGGGTGGTTCTGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389384.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGGCTTCTTCTTCTTGTaGGAACCTAGGCCGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAFDKILHTDRTCPALPGFFFL*EPRPEA Trigger: TGCCTCCGGCCTAGGTTCCAACAAGAAGAAGAAGCC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCGGGAGATACCATAGCTaGTCTGACTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLEAARGLLRSSSPSGLGRYHS*SDFLFL Trigger: CAAGAAGAGAAAGTCAGACAAGCTATGGTATCTCCC...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454077.6 |
||
| CDS-3UTR CAA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGGCAGCGCAGGGACCTaGTGCACATCTTCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRGSAGT*CTSSWC Trigger: ACACCAAGAAGATGTGCACAAGGTCCCTGCGCTGCC...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGTTTGGCTTCTTCTTCTaGTTGGAACCTAGGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLQPGMSHNQNHPSGRAEFGFFF*LEPRPE Trigger: CTCCGGCCTAGGTTCCAACAAGAAGAAGAAGCCAAA...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CAA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGGGGTGCCGGTGGCTTaGGCTTCTTCTTCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRGVPVA*ASSSCW Trigger: CCAACAAGAAGAAGAAGCCAAAGCCACCGGCACCCC...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
||
| CDS-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCAGAAATCACCCCACATaGCTGGAAGAGGAATATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHLEAARGLLRSSSPSGLRNHPT*LEEEYK Trigger: CTTATATTCCTCTTCCAGCAATGTGGGGTGATTTCT...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591295.5 |
||
| CDS-3UTR CAA 90 bp | AATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGCGGAGTCTGACTTTCTCTTCTaGGCTTTCTTCTCCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLQPGMSHNQNHPSGRAESDFLF*AFFSEP Trigger: TGGCTCGGAGAAGAAAGCCAAGAAGAGAAAGTCAGA...CTCCGCTCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
||
| CDS-3UTR CAA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAATGCTGCGACTGCAATaGGGGCAAACACACTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRMLRLQ*GQTHSL Trigger: CAAGGAGTGTGTTTGCCCCAATTGCAGTCGCAGCAT...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000389384.8 ENST00000454077.6 |
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| CDS-3UTR CAA 90 bp | CTGCATCTGGAAGCGGCTAGAGGCCTGCTGAGATCCTCCTCTCCCTCTGGCCTCCTGATCCCAGTTGAATaGTTATACTTAAAAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: LHLEAARGLLRSSSPSGLLIPVE*LYLKGS Trigger: GGATCCTTTTAAGTATAACAATTCAACTGGGATCAG...GAGGCCAGAGGGAGAGGAGGATCTCAGCAGGCCTCTAGCCGCTTCCAGATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCGGGTTAAAAACCAATTaGCAACCAGGCATGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LGAFDKILHTDRTCPALPGLKTN*QPGMSH Trigger: GTGGCTCATGCCTGGTTGCAAATTGGTTTTTAACCC...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CACACTCAGACACAGGATACAGGGTGGACGACACCTAGCCGGGGTGGGAAGGATCTGATCCCAGTTGAATaGTTATACTTAAAAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: HTQTQDTGWTTPSRGGKDLIPVE*LYLKGS Trigger: GGATCCTTTTAAGTATAACAATTCAACTGGGATCAG...ATCCTTCCCACCCCGGCTAGGTGTCGTCCACCCTGTATCCTGTGTCTGAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | AAAACCAATTTGCAACCAGGCATGAGCCACAATCAGAACCACCCCAGCGGGAGAGGGTTAAAAACCAATTaGCAACCAGGCATGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: KTNLQPGMSHNQNHPSGRGLKTN*QPGMSH Trigger: GTGGCTCATGCCTGGTTGCAAATTGGTTTTTAACCC...TCTCCCGCTGGGGTGGTTCTGATTGTGGCTCATGCCTGGTTGCAAATTGGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS-3UTR CAA 90 bp | CTGGGGGCATTTGATAAGATTCTGCACACAGACAGGACATGCCCAGCCTTGCCCCTGATCCCAGTTGAATaGTTATACTTAAAAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: LGAFDKILHTDRTCPALPLIPVE*LYLKGS Trigger: GGATCCTTTTAAGTATAACAATTCAACTGGGATCAG...GGGCAAGGCTGGGCATGTCCTGTCTGTGTGCAGAATCTTATCAAATGCCCCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000591295.5 |
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| CDS CAA 72 bp | AGACAGGGAAGGGGTGAATGCAGATTCATCCCCAGATaGTGGCCAAAGGCCTCATCATTAGAGGAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RQGRGECRFIPR*WPKASSLEEGR Trigger: CCTTCCCTCCTCTAATGATGAGGCCTTTGGCCACAATCTGGGGATGAATCTGCATTCACCCCTTCCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591807.1 |
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| CDS CCA 72 bp | TGGTTGAAAACCTGTCCAAAGATGTCCAAGCCCGGCTaGTCCACGATCTCAAAATCCTTCATGCTATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: WLKTCPKMSKPG*STISKSFMLSG Trigger: CCCTGATAGCATGAAGGATTTTGAGATCGTGGACCAGCCGGGCTTGGACATCTTTGGACAGGTTTTCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000389384.8 ENST00000454077.6 ENST00000587097.6 ENST00000589805.1 ENST00000590169.5 |
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| CDS CAA 72 bp | AATGAGTCCCAGAAGACACAGCTAGAAGCATTCCCATaGCTCCGGCTCCACTTACCATTTTTGTGTTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: NESQKTQLEAFP*LRLHLPFLCFN Trigger: ATTAAAACACAAAAATGGTAAGTGGAGCCGGAGCAATGGGAATGCTTCTAGCTGTGTCTTCTGGGACTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589607.5 |
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