RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000066427

Ensembl transcript IDs: ENST00000359366.10, ENST00000393287.9, ENST00000429774.6, ENST00000507965.5, ENST00000545170.5, ENST00000553488.5, ENST00000553570.5, ENST00000554350.5, ENST00000554673.5, ENST00000554994.5, ENST00000555816.5, ENST00000556274.5, ENST00000556288.5, ENST00000556315.6, ENST00000556339.5, ENST00000556374.5, ENST00000556644.5, ENST00000556671.5, ENST00000556898.5, ENST00000556958.5, ENST00000557030.6, ENST00000564606.6, ENST00000568290.1, ENST00000617719.4, ENST00000620536.4, ENST00000642417.1, ENST00000642896.1, ENST00000644486.2, ENST00000646485.1, ENST00000647161.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAAATGAACTTAACGAGGGAGCACACACAGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCACTGCCACAGTGCACTTGTATCATGG +
Preference number: 1 (lower is better)
Translates to: ANELNEGAHTEGLQG*VLSKRHCHSALVSW
Trigger: CCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR GCA 90 bp GCACACACAGAAGGGCTGCAGGGCTGGGTCCTGAGCAAGCGGCACTaGCACAGTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGT +
Preference number: 1 (lower is better)
Translates to: AHTEGLQGWVLSKRH*HSALVSWPNNNAFC
Trigger: ACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR TCA 90 bp TGTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTGCCCAGCTaGAATTCCAAACAGGTGATACAGATGCTGCTGGTCCTCCATCCA +
Preference number: 1 (lower is better)
Translates to: CEPQWLQVVGSKLPS*NSKQVIQMLLVLHP
Trigger: TGGATGGAGGACCAGCAGCATCTGTATCACCTGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR TCA 90 bp AAACCAACCCAGCACAATCTAACACAACACCTCAAACAGAGCCTGTaGACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTGCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: KPTQHNLTQHLKQSL*TSVATGGGIEAAQL
Trigger: CAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGGTGTTGTGTTAGATTGTGCTGGGTTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR GCA 90 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCT +
Preference number: 1 (lower is better)
Translates to: GCELCPDRSPCCCCC*CCCCFCCCIKRMSA
Trigger: AGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTaGTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCTGATCAGAAT +
Preference number: 1 (lower is better)
Translates to: LCPDRSPCCCCCCCC*CFCCCIKRMSADQN
Trigger: ATTCTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTaGTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCTGAT +
Preference number: 1 (lower is better)
Translates to: CELCPDRSPCCCCCC*CCCFCCCIKRMSAD
Trigger: ATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCA +
Preference number: 1 (lower is better)
Translates to: HGCELCPDRSPCCCC*CCCCCFCCCIKRMS
Trigger: TGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATG +
Preference number: 1 (lower is better)
Translates to: SHGCELCPDRSPCCC*CCCCCCFCCCIKRM
Trigger: CATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp CTTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGG +
Preference number: 1 (lower is better)
Translates to: LSHGCELCPDRSPCC*CCCCCCCFCCCIKR
Trigger: CCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCAACTACTTTAC +
Preference number: 1 (lower is better)
Translates to: SHGCELCPDRSPCCC*CCCCCCFCCCQLLY
Trigger: GTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 90 bp CTTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCAACTACTT +
Preference number: 1 (lower is better)
Translates to: LSHGCELCPDRSPCC*CCCCCCCFCCCQLL
Trigger: AAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 90 bp CTTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAAACAT +
Preference number: 1 (lower is better)
Translates to: LSHGCELCPDRSPCC*CCCCCCCFCCCLKH
Trigger: ATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR GCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCAACTACTTTACTTT +
Preference number: 1 (lower is better)
Translates to: HGCELCPDRSPCCCC*CCCCCFCCCQLLYF
Trigger: AAAGTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAAACATTAT +
Preference number: 1 (lower is better)
Translates to: SHGCELCPDRSPCCC*CCCCCCFCCCLKHY
Trigger: ATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR GCA 90 bp TGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGTTTTGCTGCTGTATTAAGAGGATGTCAGCTGATCAGAATTTT +
Preference number: 1 (lower is better)
Translates to: CPDRSPCCCCCCCCC*FCCCIKRMSADQNF
Trigger: AAAATTCTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR CCA 90 bp GCTATTAAAATTGAAGGCCAAATTTCATGTATCATACATTCATGGTaGGTACGTATGTTTAGTCTTCTAACAGAAGGAGACTTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: AIKIEGQISCIIHSW*VRMFSLLTEGDLPA
Trigger: TGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CCA 90 bp ACTGCTATTAAAATTGAAGGCCAAATTTCATGTATCATACATTCATaGTGGGTACGTATGTTTAGTCTTCTAACAGAAGGAGACTTGCCT +
Preference number: 1 (lower is better)
Translates to: TAIKIEGQISCIIHS*WVRMFSLLTEGDLP
Trigger: AGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATAGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 2 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAASPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR GCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 2 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCSPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR GCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 2 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFSPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CCA 90 bp CACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGTGTGAGCAACAACGCGCCTGTGAACCTCAGTaGCTACAGGTGGTGGGATCG +
Preference number: 2 (lower is better)
Translates to: HTRPCEETTKQALCEQQRACEPQ*LQVVGS
Trigger: CGATCCCACCACCTGTAGCCACTGAGGTTCACAGGC...GCGTTGTTGCTCACACAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR GCA 90 bp TTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 2 (lower is better)
Translates to: FHMDVNSVLIGPPAAAAASPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...AGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR TCA 90 bp TGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCTGATCAGACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: CCCCCCFCCCIKRMSADQTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...CTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR-3UTR TCA 90 bp GATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGAAGAGCCGTCTCATTaGGTGACTTCCTGTTGTAAT +
Preference number: 2 (lower is better)
Translates to: DVNSVLIGPPAAAAAAAVEEPSH*VTSCCN
Trigger: ATTACAACAGGAAGTCACTCAATGAGACGGCTCTTC...AACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553488.5
3UTR-3UTR TCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGCTTTTGCTGCTGTCTaGAACATTATTAAGAGGATG +
Preference number: 2 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCAFAAV*NIIKRM
Trigger: CATCCTCTTAATAATGTTTCAGACAGCAGCAAAAGC...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR-3UTR GCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGTTGCTGCTTTTaGTGCTGTCAACTACTTTAC +
Preference number: 2 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCCCCCF*CCQLLY
Trigger: GTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCA...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR-3UTR GCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGCTGCTTTTaGTGCTGTCTGAAACATTAT +
Preference number: 2 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCCCCCF*CCLKHY
Trigger: ATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCA...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR-3UTR CCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCGACACATTACCAAAGTaGACCCTATGCTGTAATCAC +
Preference number: 2 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCDTLPK*TLCCNH
Trigger: GTGATTACAGCATAGGGTCCACTTTGGTAATGTGTC...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR-3UTR TCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 2 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR GCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTCTGGAACTACCTTTaGTCTTTTAGTTGTGCTAAT +
Preference number: 2 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCFWNYL*SFSCAN
Trigger: ATTAGCACAACTAAAAGAGCAAAGGTAGTTCCAGAA...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555816.5
3UTR-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAACTCCTGGCCTGAAGTaGTTCGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKTPGLK*FAHLSL
Trigger: GAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGAGCCCTTGGCACTCTaGAACCTCTGCCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKEPLAL*NLCLLG
Trigger: GCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTTGCTCTTCATCACTCAATAAGCAGCAAAACCAACCCAGCACAATCTAACACACTCAGTGGCTACAGGTaGTGGGATCGAAGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: VALHHSISSKTNPAQSNTLSGYR*WDRSCP
Trigger: TGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAG...TGTGTTAGATTGTGCTGGGTTGGTTTTGCTGCTTATTGAGTGATGAAGAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACTCTGTTGGGCAGGCTaGAATGCAGTGGTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKLCWAG*NAVVSP
Trigger: AGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAGACTCCCAGGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKRLPGS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGGAACGCACCAGTCATaGAATAATGATCCCATCGTA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAGTHQS*NNDPIV
Trigger: TACGATGGGATCATTATTTCATGACTGGTGCGTTCC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGTACTTGTGCAAGGCTaGTTTCAGAGTTTAGGAACG +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAVLVQG*FQSLGT
Trigger: CGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTAC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTAAAGGAGATGGAGAATaGGGGATAGGGAACACTGAA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAKGDGE*GIGNTE
Trigger: TTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACCAACCCCACCAAGATaGCAGTTCACTAGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKPTPPR*QFTSAS
Trigger: AGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTTGCTCTTCATCACTCAATAAGCAGCAAAACCAACCCAGCACAATCTAACACATCGAAGCTGCCCAGCTaGAATTCCAAACAGGTGATA +
Preference number: 2 (lower is better)
Translates to: VALHHSISSKTNPAQSNTSKLPS*NSKQVI
Trigger: TATCACCTGTTTGGAATTTCAGCTGGGCAGCTTCGA...TGTGTTAGATTGTGCTGGGTTGGTTTTGCTGCTTATTGAGTGATGAAGAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGCAGGAAGAAGGGGTTaGAACAAAGCTGTAAGGTTT +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAAGRRG*NKAVRF
Trigger: AAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATTCAAGCAATTCTCCTaGCTCAGACTCCCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKFKQFS*LRLPGS
Trigger: GCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTGGGCAGGCTGGAATaGAGTGGTGAGCCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLGRLE*SGEPLA
Trigger: TGCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCTCTGTTGGGCAGGCTaGAATGCAGTGGTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLCWAG*NAVVSP
Trigger: AGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSADTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCTTGAACTCCTGGCCTaGAGTGATTCGCCCACCTCA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLELLA*SDSPTS
Trigger: TGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACGATTCTTAGCCTCCTaGGTAGCTGGGATTACAAGT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKRFLAS*VAGITS
Trigger: ACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGCAGGAAGAAGGGGTTaGAACAAAGCTGTAAGGTTT +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSAGRRG*NKAVRF
Trigger: AAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCCACTGCCCCCGACTaGGATAAAGTTTTTAATAGG +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKATAPD*DKVFNR
Trigger: CCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 90 bp ACCAAATGTCACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTaGTGTGAGCAACAACGCTGTTTATTTCACAAGTTTGATAGCATT +
Preference number: 2 (lower is better)
Translates to: TKCHTRPCEETTKQA*CEQQRCLFHKFDSI
Trigger: AATGCTATCAAACTTGTGAAATAAACAGCGTTGTTGCTCACACAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTGACATTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTAAAGCCACTATTACATaGTGTGAGCCAACTTACCTA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAKATIT*CEPTYL
Trigger: TAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGTACTTGTGCAAGGCTaGTTTCAGAGTTTAGGAACG +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKVLVQG*FQSLGT
Trigger: CGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTAC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCCAGATCACCATCTTTaGCAAGCTATACCTACTAAA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAPDHHL*QAIPTK
Trigger: TTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCAGGAAGAAGGGGTTaGAACAAAGCTGTAAGGTTT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKAGRRG*NKAVRF
Trigger: AAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 90 bp CATTCATGGTGGGTACGTATGTTTAGTCTTCTAACAGAAGGAGACTaGCCTGCATACTATGCTTCTCCTAGTTTTCTCAATTGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: HSWWVRMFSLLTEGD*PAYYASPSFLNWRR
Trigger: TCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAAAGCCACTATTACATaGTGTGAGCCAACTTACCTA +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSKATIT*CEPTYL
Trigger: TAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCCAGATCACCATCTTTaGCAAGCTATACCTACTAAA +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSPDHHL*QAIPTK
Trigger: TTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTGGTTTTCACCAAAATaGTACTATCCTATTGACCCA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAWFSPK*YYPIDP
Trigger: TGGGTCAATAGGATAGTATCATTTTGGTGAAAACCA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTCGAAGTTGTCAGCTaGAATTTCTTGGATTTTAGC +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAFEVVS*NFLDFS
Trigger: GCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCCAACCCCACCAAGATaGCAGTTCACTAGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCPTPPR*QFTSAS
Trigger: AGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCTGAGGTCAGGAGTTTaGGACCAGCCTAACATGGTA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLRSGV*DQPNMV
Trigger: TACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTCAAGCAATTCTCCTaGCTCAGACTCCCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCFKQFS*LRLPGS
Trigger: GCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGACACATTACCAAAGTaGACCCTATGCTGTAATCAC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKDTLPK*TLCCNH
Trigger: GTGATTACAGCATAGGGTCCACTTTGGTAATGTGTC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSARKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAACACAAGAAAACACTaGAGCACACGGTATACAGTT +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSNTRKH*STRYTV
Trigger: AACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATATGGTTACTTGCACTaGCATCTTTTCATACTGGCC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKYGYLH*HLFILA
Trigger: GGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCCCGCCACCATACCTaGCTTAAGTTTTGTATTTTT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKARHHT*LKFCIF
Trigger: AAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACACTATTACATGATGTaGGCCAACTTACCTACAAGA +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKHYYMM*ANLPTR
Trigger: TCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTGGTTTTCACCAAAATaGTACTATCCTATTGACCCA +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSWFSPK*YYPIDP
Trigger: TGGGTCAATAGGATAGTATCATTTTGGTGAAAACCA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCGATTCTTAGCCTCCTaGGTAGCTGGGATTACAAGT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCRFLAS*VAGITS
Trigger: ACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAGTATAGAGTTTACCTaGAGCAGCCTTTTCAAACAG +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKSIEFT*SSLFKQ
Trigger: CTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAACACAAGAAAACACTaGAGCACACGGTATACAGTT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKNTRKH*STRYTV
Trigger: AACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTATCATACATTCATGGTaGGTACGTATGTTTAGTCTT +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAIIHSW*VRMFSL
Trigger: AAGACTAAACATACGTACCCACCATGAATGTATGAT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSACIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGCCACTGCCCCCGACTaGGATAAAGTTTTTAATAGG +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCATAPD*DKVFNR
Trigger: CCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 90 bp CCAAACAGGCTTTGTGTGAGCAACAACGCTGTTTATTTCACAAGTTaGATAGCATTTGAGCTGAAGACATCTCTTCCTTTTTCTGCAAAA +
Preference number: 2 (lower is better)
Translates to: PNRLCVSNNAVYFTS*IAFELKTSLPFSAK
Trigger: TTTTGCAGAAAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGCGTTGTTGCTCACACAAAGCCTGTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGGAACGCACCAGTCATaGAATAATGATCCCATCGTA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCGTHQS*NNDPIV
Trigger: TACGATGGGATCATTATTTCATGACTGGTGCGTTCC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGGAACGCACCAGTCATaGAATAATGATCCCATCGTA +
Preference number: 2 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSGTHQS*NNDPIV
Trigger: TACGATGGGATCATTATTTCATGACTGGTGCGTTCC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGTACTTGTGCAAGGCTaGTTTCAGAGTTTAGGAACG +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCVLVQG*FQSLGT
Trigger: CGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTAC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATGGTTTTCACCAAAATaGTACTATCCTATTGACCCA +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKWFSPK*YYPIDP
Trigger: TGGGTCAATAGGATAGTATCATTTTGGTGAAAACCA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAAAGGAGATGGAGAATaGGGGATAGGGAACACTGAA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCKGDGE*GIGNTE
Trigger: TTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATTCGAAGTTGTCAGCTaGAATTTCTTGGATTTTAGC +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKFEVVS*NFLDFS
Trigger: GCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAACTGGTAGTTTTGTCTaGAATGATACTCAACTGGTT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKTGSFV*NDTQLV
Trigger: AACCAGTTGAGTATCATTGCAGACAAAACTACCAGT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKRKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCATCATACATTCATGGTaGGTACGTATGTTTAGTCTT +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSIIHSW*VRMFSL
Trigger: AAGACTAAACATACGTACCCACCATGAATGTATGAT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSCIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCDTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSDTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGTGTGTGCTCAGCTCTaGTTTAAAAACTCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCVCAQL*FKNSLA
Trigger: AGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACAC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGACACATTACCAAAGTaGACCCTATGCTGTAATCAC +
Preference number: 2 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSDTLPK*TLCCNH
Trigger: GTGATTACAGCATAGGGTCCACTTTGGTAATGTGTC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAATCATACATTCATGGTaGGTACGTATGTTTAGTCTT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKIIHSW*VRMFSL
Trigger: AAGACTAAACATACGTACCCACCATGAATGTATGAT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKCIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTATGGTTACTTGCACTaGCATCTTTTCATACTGGCC +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCYGYLH*HLFILA
Trigger: GGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGCCCGCCACCATACCTaGCTTAAGTTTTGTATTTTT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCARHHT*LKFCIF
Trigger: AAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCACTATTACATGATGTaGGCCAACTTACCTACAAGA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCHYYMM*ANLPTR
Trigger: TCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAAAGCCACTATTACATaGTGTGAGCCAACTTACCTA +
Preference number: 2 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSKATIT*CEPTYL
Trigger: TAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGAATTTAGTTGTTCCTaGCTTTCTTGCAGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCEFSCS*LSCRWF
Trigger: AAACCACCTGCAAGAAAGTCAGGAACAACTAAATTC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTCTGTACAGGTCCAATaGGCCGGTTTTAAGAATTTA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCSVQVQ*AGFKNL
Trigger: TAAATTCTTAAAACCGGCCCATTGGACCTGTACAGA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTTACATTGCTGACATaGTTAGTTGATCCAATCTGG +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCFTLLT*LVDPIW
Trigger: CCAGATTGGATCAACTAATCATGTCAGCAATGTAAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTACATTCCTTGAACTATaGAAGAGACAATTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCTFLEL*KRQLRA
Trigger: AGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSCIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCCIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGTGGTTTACAGTAAATaGCAGTACCTGATGTATAAA +
Preference number: 2 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCVVYSK*QYLMYK
Trigger: TTTATACATCAGGTACTGCCATTTACTGTAAACCAC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR TCA 72 bp TCACGGAGTGAGGGCAAGGACAGGGGACCCGTCTCCTaGAGGAGTCCTCCTGTCCCGGGTCTTCAGCACCAA +
Preference number: 3 (lower is better)
Translates to: SRSEGKDRGPVS*RSPPVPGLQHQ
Trigger: TTGGTGCTGAAGACCCGGGACAGGAGGACTCCTTCAGGAGACGGGTCCCCTGTCCTTGCCCTCACTCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR CCA 72 bp CTTAACGAGGGAGCACACACAGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCACTGCCACAGTGCACTT +
Preference number: 3 (lower is better)
Translates to: LNEGAHTEGLQG*VLSKRHCHSAL
Trigger: AAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR GCA 72 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: GCELCPDRSPCC*CCCCCCCFCCC
Trigger: ACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
3UTR GCA 72 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTaGTGCTGCTGCTGCTGCTGTTGCTGCTTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: HGCELCPDRSPC*CCCCCCCCFCC
Trigger: GCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
3UTR GCA 72 bp CAGAAACAGTGTCTCACTCTGTTGGGCAGGCTGGAATaGAGTGGTGAGCCCTTGGCACTCTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: QKQCLTLLGRLE*SGEPLALCNLC
Trigger: GCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR GCA 72 bp GAAGGGCTGCAGGGCTGGGTCCTGAGCAAGCGGCACTaGCACAGTGCACTTGTATCATGGCCAAACAACAAT +
Preference number: 3 (lower is better)
Translates to: EGLQGWVLSKRH*HSALVSWPNNN
Trigger: ATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR GCA 72 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: CELCPDRSPCCC*CCCCCCFCCCL
Trigger: CAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR GCA 72 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTaGTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTGC +
Preference number: 3 (lower is better)
Translates to: SHGCELCPDRSP*CCCCCCCCCFC
Trigger: GCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
3UTR GCA 72 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGG +
Preference number: 3 (lower is better)
Translates to: LCPDRSPCCCCC*CCCCFCCCIKR
Trigger: CCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 72 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTCAACTACTT +
Preference number: 3 (lower is better)
Translates to: LCPDRSPCCCCC*CCCCFCCCQLL
Trigger: AAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCAACTA +
Preference number: 3 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCQL
Trigger: TAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 72 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: CELCPDRSPCCC*CCCCCCFCCCQ
Trigger: TTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR GCA 72 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTCTGAAACAT +
Preference number: 3 (lower is better)
Translates to: LCPDRSPCCCCC*CCCCFCCCLKH
Trigger: ATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAAA +
Preference number: 3 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCLK
Trigger: TTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR-3UTR CAA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTCCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 3 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAAPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR TCA 72 bp CAGTGGCTACAGGTGGTGGGATCGAAGCTGCCCAGCTaGAATTCCAAACAGGTGATACAGATGCTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: QWLQVVGSKLPS*NSKQVIQMLLV
Trigger: GACCAGCAGCATCTGTATCACCTGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR GCA 72 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: CELCPDRSPCCC*CCCCCCFCCCF
Trigger: AAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
3UTR GCA 72 bp AGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGTTTTGCTGCTGTATTAAGAGGATGTCAGCTGAT +
Preference number: 3 (lower is better)
Translates to: RSPCCCCCCCCC*FCCCIKRMSAD
Trigger: ATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAG +
Preference number: 3 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCIK
Trigger: CTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 72 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATT +
Preference number: 3 (lower is better)
Translates to: CELCPDRSPCCC*CCCCCCFCCCI
Trigger: AATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR GCA 72 bp TGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTaGTGTTGCTGCTTTTGCTGCTGTCAACTACTTTAC +
Preference number: 3 (lower is better)
Translates to: CPDRSPCCCCCC*CCCFCCCQLLY
Trigger: GTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
3UTR CCA 72 bp CAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTaGGATCGAAGCTGCCCAGCTGAAATTCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: QTEPVNLSGYRW*DRSCPAEIPNR
Trigger: CCTGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR CCA 72 bp CCTCAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTaGTGGGATCGAAGCTGCCCAGCTGAAATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: PQTEPVNLSGYR*WDRSCPAEIPN
Trigger: GTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR CAA 90 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: GCELCPDRSPCCCCCCCCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...ACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTCTGCTGTTGCTGCTTTaGCTGCTGTCTGAAACATTA +
Preference number: 3 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVALLLLL*LLSETL
Trigger: TAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAG...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR GCA 72 bp TGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTaGTGTTGCTGCTTTTGCTGCTGTCTGAAACATTAT +
Preference number: 3 (lower is better)
Translates to: CPDRSPCCCCCC*CCCFCCCLKHY
Trigger: ATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
3UTR-3UTR CAA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp GATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: DVNSVLIGPPAAAAAAAVFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR GCA 72 bp CCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTaGTGCTGTATTAAGAGGATGTCAGCTGATCAGAAT +
Preference number: 3 (lower is better)
Translates to: PCCCCCCCCCCF*CCIKRMSADQN
Trigger: ATTCTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR-3UTR CAA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVAFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR-3UTR CAA 90 bp TTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: FHMDVNSVLIGPPAAAAAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR TCA 72 bp TGGGATCGAAGCTGCCCAGCTGAAATTCCAAACAGGTaGTACAGATGCTGCTGGTCCTCCATCCATACTTTT +
Preference number: 3 (lower is better)
Translates to: WDRSCPAEIPNR*YRCCWSSIHTF
Trigger: AAAAGTATGGATGGAGGACCAGCAGCATCTGTATCACCTGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR-3UTR CAA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
3UTR-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 3 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 3 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCGCAGGAAGAAGGGGTaGCAACAAAGCTGTAAGGTT +
Preference number: 3 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSRRKKG*QQSCKV
Trigger: AACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTGCAGTGGTGAGCCCTaGGCACTCTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCCSGEP*ALCNLC
Trigger: GCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 3 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 3 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 3 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359366.10
3UTR-3UTR CAA 90 bp TGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCTGATCAGTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: CCCCCCFCCCIKRMSADQCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...CTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
3UTR-3UTR CAA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 3 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAGGCAGGAGAATTGCTaGAACCCGGGAGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCRQENC*NPGGGS
Trigger: ACTTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCACGCAGGAAGAAGGGGTaGCAACAAAGCTGTAAGGTT +
Preference number: 3 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSRRKKG*QQSCKV
Trigger: AACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCG...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCGCAGGAAGAAGGGGTaGCAACAAAGCTGTAAGGTT +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCRRKKG*QQSCKV
Trigger: AACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAATGATACTATCCTATaGACCCAGCAAGAAACTCTC +
Preference number: 3 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSNDTIL*TQQETL
Trigger: GAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 3 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGGACTACTGGTAGTTTaGTCTGCAATGATACTCAAC +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCGLLVV*SAMILN
Trigger: GTTGAGTATCATTGCAGACAAAACTACCAGTAGTCC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAATGATACTATCCTATaGACCCAGCAAGAAACTCTC +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCNDTIL*TQQETL
Trigger: GAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR TCA 72 bp CAACAACGCTGTTTATTTCACAAGTTTGATAGCATTTaGGCTGAAGACATCTCTTCCTTTTTCTGCAAAATA +
Preference number: 3 (lower is better)
Translates to: QQRCLFHKFDSI*AEDISSFFCKI
Trigger: TATTTTGCAGAAAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGCGTTGTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647161.1
3UTR CCA 72 bp AAAATTGAAGGCCAAATTTCATGTATCATACATTCATaGTGGGTACGTATGTTTAGTCTTCTAACAGAAGGA +
Preference number: 3 (lower is better)
Translates to: KIEGQISCIIHS*WVRMFSLLTEG
Trigger: TCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAATPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVATPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GCTGCCCAGCTGAAATTCCAAACAGGTGATACAGATGCTGCTGGTCCTCCATCCAGGGGACCCGTCTCCTaGAGGAGTCCTCCTGTCCCG +
Preference number: 4 (lower is better)
Translates to: AAQLKFQTGDTDAAGPPSRGPVS*RSPPVP
Trigger: CGGGACAGGAGGACTCCTTCAGGAGACGGGTCCCCT...GGATGGAGGACCAGCAGCATCTGTATCACCTGTTTGGAATTTCAGCTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR TCA 90 bp GATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: DVNSVLIGPPAAAAAAAVTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp ACACCTCAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPQTEPVNLSGYRWWDRSTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...GCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR GCA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAASPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGGAACGCACCAGTCATaGAATAATGATCCCATCGTA +
Preference number: 4 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCGTHQS*NNDPIV
Trigger: TACGATGGGATCATTATTTCATGACTGGTGCGTTCC...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGAAGAGCCGTCTCATTaGGTGACTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCEEPSH*VTSCCN
Trigger: ATTACAACAGGAAGTCACTCAATGAGACGGCTCTTC...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556671.5
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
CDS-3UTR TCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGTACTTGTGCAAGGCTaGTTTCAGAGTTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVAVLVQG*FQSLGT
Trigger: CGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTAC...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCDTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR GCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCAGGAAGAAGGGGTTaGAACAAAGCTGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAAAGRRG*NKAVRF
Trigger: AAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR GCA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGCTGCTTTTaGTGCTGTCAACTACTTTAC +
Preference number: 4 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCCCCCF*CCQLLY
Trigger: GTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCA...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
CDS-3UTR GCA 90 bp ACACCTCAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTGGTGGGATCGAAGCTaGCCAGCTGAAATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: TPQTEPVNLSGYRWWDRSWWDRS*PAEIPN
Trigger: GTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCA...GCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAEGLQG*VLSKRH
Trigger: GTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 72 bp CCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTaGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLLLLLLLLLLL*LLFFKVGFSSL
Trigger: AAGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
CDS-3UTR TCA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
CDS-3UTR TCA 90 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GCELCPDRSPCCCCCCCCLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...ACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAALFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVALFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp CACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGTGTGAGCAACAACGCCTCAAACAGAGCCTGTaGACCTCAGTGGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: HTRPCEETTKQALCEQQRLKQSL*TSVATG
Trigger: ACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAG...GCGTTGTTGCTCACACAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR GCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTGCTGTTGCTGCTTTTaGTGCTGTATTAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFCCCCF*CCIKRM
Trigger: CATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCA...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
CDS-3UTR GCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTaGTGCTGTATTAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCCCCCF*CCIKRM
Trigger: CATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCA...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSEGLQG*VLSKRH
Trigger: GTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp TTCAGCACCAAATGTCACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGCTCAGTGGCTACAGGTaGTGGGATCGAAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FSTKCHTRPCEETTKQALLSGYR*WDRSCP
Trigger: TGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAG...CAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTGACATTTGGTGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CCA 90 bp CACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGTGTGAGCAACAACGCCCTGCTTCTGCCTCCTaGGTAGCTGGAACTAGATCA +
Preference number: 4 (lower is better)
Translates to: HTRPCEETTKQALCEQQRPASAS*VAGTRS
Trigger: TGATCTAGTTCCAGCTACCCAGGAGGCAGAAGCAGG...GCGTTGTTGCTCACACAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CCA 90 bp CCTGTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTGCCCAGCTGAAATTCAGGCTAGAATTCAGTaGCAGGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PVNLSGYRWWDRSCPAEIQARIQ*QDHSSL
Trigger: CAGTGAGCTATGATCCTGCCACTGAATTCTAGCCTG...AATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR TCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp CACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HMDVNSVLIGPPAAAAAALFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTACTCCTGGCCTGAAGTaGTTCGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSATPGLK*FAHLSL
Trigger: GAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTGCTGTTGCTGCTTTTaGTGCTGTCTGAAACATTAT +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVACCCCF*CCLKHY
Trigger: ATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617719.4
CDS-3UTR CCA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCCATGTTTATTTGTCTaGAGCCAACGGCCCCCACGC +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLFFKVGFSSPCLFV*SQRPPR
Trigger: GCGTGGGGGCCGTTGGCTCCAGACAAATAAACATGG...AGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCAACACAAGAAAACACTaGAGCACACGGTATACAGTT +
Preference number: 4 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCNTRKH*STRYTV
Trigger: AACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTT...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKEGLQG*VLSKRH
Trigger: GTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 72 bp CCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTaGCTGCTGTCTGAAACATTATTAAGAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: PLLLLLLLLLLL*LLSETLLRGCQ
Trigger: CTGACATCCTCTTAATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617719.4
CDS-3UTR TCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 4 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000617719.4
CDS-3UTR TCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 4 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAAVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000617719.4
CDS-3UTR TCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: GCELCPDRSPCCCCCCCCSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...ACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVASKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSATPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCAAAGCCACTATTACATaGTGTGAGCCAACTTACCTA +
Preference number: 4 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCKATIT*CEPTYL
Trigger: TAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTT...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTGGTTTTCACCAAAATaGTACTATCCTATTGACCCA +
Preference number: 4 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVAWFSPK*YYPIDP
Trigger: TGGGTCAATAGGATAGTATCATTTTGGTGAAAACCA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCACTCCTGGCCTGAAGTaGTTCGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSTPGLK*FAHLSL
Trigger: GAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTGGGCAGGCTGGAATaGAGTGGTGAGCCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALGRLE*SGEPLA
Trigger: TGCCAAGGGCTCACCACTGCATTCCAGCCTGCCCAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTGTTGCTGCTTTTGCTaGTGTCAACTACTTTACTTT +
Preference number: 4 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAACCCFC*CQLLYF
Trigger: AAAGTAAAGTAGTTGACAGCAGCAAAAGCAGCAACA...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCTCTGTTGGGCAGGCTaGAATGCAGTGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALCWAG*NAVVSP
Trigger: AGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: HMDVNSVLIGPPAAAAAASKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAASKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp TTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHMDVNSVLIGPPAAAAALFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR TCA 90 bp GATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 4 (lower is better)
Translates to: DVNSVLIGPPAAAAAAAVVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...AACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCTTGAACTCCTGGCCTaGAGTGATTCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALELLA*SDSPTS
Trigger: TGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGCTGGAATGCAGTGGTaGGCCCTTGGCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSAGMQW*ALGTLQ
Trigger: TTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCATCATACATTCATGGTaGGTACGTATGTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCIIHSW*VRMFSL
Trigger: AAGACTAAACATACGTACCCACCATGAATGTATGAT...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CCA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTGTATCATACATTCATaGTGGGTACGTATGTTTAGT +
Preference number: 4 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFCIIHS*WVRMFS
Trigger: ACTAAACATACGTACCCACCATGAATGTATGATACA...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTAGACTCCCAGGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSARLPGS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCTCTGTTGGGCAGGCTaGAATGCAGTGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSLCWAG*NAVVSP
Trigger: AGGGCTCACCACTGCATTCCAGCCTGCCCAACAGAG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGAAAGGAGATGGAGAATaGGGGATAGGGAACACTGAA +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSKGDGE*GIGNTE
Trigger: TTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTT...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCTTGAACTCCTGGCCTaGAGTGATTCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSLELLA*SDSPTS
Trigger: TGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCTGGAATGCAGTGGTaGGCCCTTGGCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKAGMQW*ALGTLQ
Trigger: TTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSASPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTGCCCAGGCTAGAGTaGAATGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALPRLE*NGTISA
Trigger: AGCTGAGATCGTGCCATTGCACTCTAGCCTGGGCAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCTGAGCAAGCGGCACTaGCACAGTGCACTTGTATCA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALSKRH*HSALVS
Trigger: TGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCCATGTTTATTTGTCTaGAGCCAACGGCCCCCACGC +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSPCLFV*SQRPPR
Trigger: GCGTGGGGGCCGTTGGCTCCAGACAAATAAACATGG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGACTCCCAGGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSRLPGS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGAAGGGCTGCAGGGCTaGGTCCTGAGCAAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSEGLQG*VLSKRH
Trigger: GTGCCGCTTGCTCAGGACCCAGCCCTGCAGCCCTTC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp TTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 4 (lower is better)
Translates to: FHMDVNSVLIGPPAAAAAVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...AGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000617719.4
CDS-3UTR TCA 90 bp GTAAAGTCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VKSSKVSYLKSLSLTFSITPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...AATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGACTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556671.5
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCCAACCCCACCAAGATaGCAGTTCACTAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAPTPPR*QFTSAS
Trigger: AGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACTTGAACTCCTGGCCTaGAGTGATTCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKLELLA*SDSPTS
Trigger: TGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCTGAGGTCAGGAGTTTaGGACCAGCCTAACATGGTA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALRSGV*DQPNMV
Trigger: TACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTCAAGCAATTCTCCTaGCTCAGACTCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAFKQFS*LRLPGS
Trigger: GCTACCTGGGAGTCTGAGGCAGGAGAATTGCTTGAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CTTTGTGTGAGCAACAACGCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAGTGGCTACAGGTGGTaGGATCGAAGCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCVSNNAVYFTSLIAFELSGYRW*DRSCPA
Trigger: AGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACT...CAGCTCAAATGCTATCAAACTTGTGAAATAAACAGCGTTGTTGCTCACACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR TCA 90 bp GGGTCTTCAGCACCAAATGTCACACGCGTCCATGTGAAGAGACTACCAAACAGGAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: GSSAPNVTRVHVKRLPNRSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...CCTGTTTGGTAGTCTCTTCACATGGACGCGTGTGACATTTGGTGCTGAAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR TCA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
CDS-3UTR TCA 90 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCAACTACTTTACTTTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CCCCCCCCCFCCCQLLYFLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AAAGTAAAGTAGTTGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556274.5
CDS-3UTR TCA 90 bp TGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATTAAGAGGATGTCAGCTGATCAGTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CCCCCCFCCCIKRMSADQLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...CTGATCAGCTGACATCCTCTTAATACAGCAGCAAAAGCAGCAACAGCAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553488.5
ENST00000556374.5
CDS-3UTR TCA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLFFKVGFSSLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359366.10
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGCACTATTACATGATGTaGGCCAACTTACCTACAAGA +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSHYYMM*ANLPTR
Trigger: TCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTG...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGCCAGATCACCATCTTTaGCAAGCTATACCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSPDHHL*QAIPTK
Trigger: TTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGG...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAACTCCTGGCCTGAAGTaGTTCGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSTPGLK*FAHLSL
Trigger: GAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCGATTCTTAGCCTCCTaGGTAGCTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSARFLAS*VAGITS
Trigger: ACTTGTAATCCCAGCTACTCAGGAGGCTAAGAATCG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCTGAGGTCAGGAGTTTaGGACCAGCCTAACATGGTA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSLRSGV*DQPNMV
Trigger: TACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGAGCCCTTGGCACTCTaGAACCTCTGCCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSEPLAL*NLCLLG
Trigger: GCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGAGCCCTTGGCACTCTaGAACCTCTGCCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCEPLAL*NLCLLG
Trigger: GCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACTGAGCAAGCGGCACTaGCACAGTGCACTTGTATCA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKLSKRH*HSALVS
Trigger: TGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTCCTGTGTTCAACAGTaGTTTGGAAGCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSASCVQQ*FGSPAF
Trigger: AAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGCCACTGCCCCCGACTaGGATAAAGTTTTTAATAGG +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAATAPD*DKVFNR
Trigger: CCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: AAAAVAAFAAVFQSRLLVSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...GACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTACTCCCAAGTGCTCCTaGACTGGTGGCTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCTPKCS*TGGWPF
Trigger: GAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGCTGGAATGCAGTGGTaGGCCCTTGGCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCAGMQW*ALGTLQ
Trigger: TTGCAGAGTGCCAAGGGCTCACCACTGCATTCCAGC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: AAAAVAAFAAVFQSRLLVVCVIS*DMFLEL
Trigger: AAGTTCCAGAAACATATCTCAAGATATGACACAGAC...GACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557030.6
ENST00000646485.1
CDS-3UTR TCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSVCVIS*DMFLEL
Trigger: AAGTTCCAGAAACATATCTCAAGATATGACACAGAC...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557030.6
ENST00000646485.1
CDS-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTCCTGTGTTCAACAGTaGTTTGGAAGCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSCVQQ*FGSPAF
Trigger: AAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSRKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGCCACTGCCCCCGACTaGGATAAAGTTTTTAATAGG +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSATAPD*DKVFNR
Trigger: CCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTGTTCAACAGTGCTTTaGAAGCCCGGCTTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSACSTVL*KPGFSN
Trigger: GTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLFFKVGFSSSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR TCA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393287.9
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGGAACGCACCAGTCATaGAATAATGATCCCATCGTA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSGTHQS*NNDPIV
Trigger: TACGATGGGATCATTATTTCATGACTGGTGCGTTCC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGTGTGTGCTCAGCTCTaGTTTAAAAACTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAVCAQL*FKNSLA
Trigger: AGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACAC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTTCTGGAACTACCTTTaGTCTTTTAGTTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSFWNYL*SFSCAN
Trigger: ATTAGCACAACTAAAAGAGCAAAGGTAGTTCCAGAA...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555816.5
CDS-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCCATGTTTATTTGTCTaGAGCCAACGGCCCCCACGC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCPCLFV*SQRPPR
Trigger: GCGTGGGGGCCGTTGGCTCCAGACAAATAAACATGG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTATGGTTACTTGCACTaGCATCTTTTCATACTGGCC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAYGYLH*HLFILA
Trigger: GGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAGACTCCCAGGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSRLPGS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSDTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGCTGACATGATTAGTTaGTCCAATCTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAADMIS*SNLVVL
Trigger: AAGAACTACCAGATTGGATCAACTAATCATGTCAGC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTATGCAAGAGACAATTaGGAGCTTCCTAAATGCATC +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAYARDN*ELPKCI
Trigger: GATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAAACATTATTAAGAGGATGTGCTTTTGCTGCTGTCTaGAACATTATTAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLLLLSETLLRGCAFAAV*NIIKRM
Trigger: CATCCTCTTAATAATGTTTCAGACAGCAGCAAAAGC...ACATCCTCTTAATAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617719.4
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAGCCCTGCGGAGATCTaGTTCCTCATCTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCSPAEI*FLIFHV
Trigger: GACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGTGTGTGCTCAGCTCTaGTTTAAAAACTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSVCAQL*FKNSLA
Trigger: AGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACAC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTGCCCAGGCTAGAGTaGAATGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLPRLE*NGTISA
Trigger: AGCTGAGATCGTGCCATTGCACTCTAGCCTGGGCAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGCGGCACTGCCACAGTaGACTTGTATCATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSAALPQ*TCIMAK
Trigger: TTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGCGGCACTGCCACAGTaGACTTGTATCATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCAALPQ*TCIMAK
Trigger: TTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCTGAGCAAGCGGCACTaGCACAGTGCACTTGTATCA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCLSKRH*HSALVS
Trigger: TGATACAAGTGCACTGTGGCAGTGCCGCTTGCTCAG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTCTGTACAGGTCCAATaGGCCGGTTTTAAGAATTTA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSASVQVQ*AGFKNL
Trigger: TAAATTCTTAAAACCGGCCCATTGGACCTGTACAGA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGCCCGCCACCATACCTaGCTTAAGTTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSARHHT*LKFCIF
Trigger: AAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATGTTCAACAGTGCTTTaGAAGCCCGGCTTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKCSTVL*KPGFSN
Trigger: GTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCCACTATTACATGATGTaGGCCAACTTACCTACAAGA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSHYYMM*ANLPTR
Trigger: TCTTGTAGGTAAGTTGGCTCACATCATGTAATAGTG...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGACACCTACATTCCATaGCTCAACTGTAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKDTYIP*LNCKEN
Trigger: GTTCTCTTTACAGTTGAGTCATGGAATGTAGGTGTC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCACCAACCCCACCAAGATaGCAGTTCACTAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSPTPPR*QFTSAS
Trigger: AGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGG...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGAATTTAGTTGTTCCTaGCTTTCTTGCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSEFSCS*LSCRWF
Trigger: AAACCACCTGCAAGAAAGTCAGGAACAACTAAATTC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTTACATTGCTGACATaGTTAGTTGATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAFTLLT*LVDPIW
Trigger: CCAGATTGGATCAACTAATCATGTCAGCAATGTAAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTCATTGCTTTGTCTATaGATCCACAGGCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSASLLCL*IHRLKM
Trigger: CATTTTAAGCCTGTGGATTCATAGACAAAGCAATGA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp TCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGTAAGAGAAGAGCCGTCTCATTaGGTGACTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSKVSYLKSLSLTFSIVREEPSH*VTSCCN
Trigger: ATTACAACAGGAAGTCACTCAATGAGACGGCTCTTC...TCTTACAATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR TCA 90 bp GTAAAGTCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGAAGAGCCGTCTCATTaGGTGACTTCCTGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: VKSSKVSYLKSLSLTFSIEEPSH*VTSCCN
Trigger: ATTACAACAGGAAGTCACTCAATGAGACGGCTCTTC...AATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGACTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR GCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGTGTGTGCTCAGCTCTaGTTTAAAAACTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKVCAQL*FKNSLA
Trigger: AGCTAGAGAGTTTTTAAAGCAGAGCTGAGCACACAC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGTATAGAGTTTACCTaGAGCAGCCTTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSIEFT*SSLFKQ
Trigger: CTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTCTGTACAGGTCCAATaGGCCGGTTTTAAGAATTTA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSVQVQ*AGFKNL
Trigger: TAAATTCTTAAAACCGGCCCATTGGACCTGTACAGA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp TCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGTAAGATTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSKVSYLKSLSLTFSIVRLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...TCTTACAATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACCAGATCACCATCTTTaGCAAGCTATACCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKPDHHL*QAIPTK
Trigger: TTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTTCGAAGTTGTCAGCTaGAATTTCTTGGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSFEVVS*NFLDFS
Trigger: GCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGCTGACATGATTAGTTaGTCCAATCTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKADMIS*SNLVVL
Trigger: AAGAACTACCAGATTGGATCAACTAATCATGTCAGC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTTTACATTGCTGACATaGTTAGTTGATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSFTLLT*LVDPIW
Trigger: CCAGATTGGATCAACTAATCATGTCAGCAATGTAAA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATATGCAAGAGACAATTaGGAGCTTCCTAAATGCATC +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKYARDN*ELPKCI
Trigger: GATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAAGACATCTCTTCCTTTTTCGAAGCTGCCCAGCTaGAATTCCAAACAGGTGATA +
Preference number: 4 (lower is better)
Translates to: AVYFTSLIAFELKTSLPFSKLPS*NSKQVI
Trigger: TATCACCTGTTTGGAATTTCAGCTGGGCAGCTTCGA...AAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR GCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCACATTCCTTGAACTATaGAAGAGACAATTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSTFLEL*KRQLRA
Trigger: AGCTCTCAATTGTCTCTTGCATAGTTCAAGGAATGT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATCCTGTGTTCAACAGTaGTTTGGAAGCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSSCVQQ*FGSPAF
Trigger: AAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSRKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGTGGTTTACAGTAAATaGCAGTACCTGATGTATAAA +
Preference number: 4 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAVVYSK*QYLMYK
Trigger: TTTATACATCAGGTACTGCCATTTACTGTAAACCAC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATCTGTACAGGTCCAATaGGCCGGTTTTAAGAATTTA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKSVQVQ*AGFKNL
Trigger: TAAATTCTTAAAACCGGCCCATTGGACCTGTACAGA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCAGTGCACTTGTATCATaGCCAAACAACAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSSALVS*PNNNAF
Trigger: AAAAGCATTGTTGTTTGGCCATGATACAAGTGCACT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
3UTR CAA 72 bp TGGGTACGTATGTTTAGTCTTCTAACAGAAGGAGACTaGCCTGCATACTATGCTTCTCCTAGTTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: WVRMFSLLTEGD*PAYYASPSFLN
Trigger: ATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTCCTTCTGTTAGAAGACTAAACATACGTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGTCTGTGTCATATCTTaGGATATGTTTCTGGAACTA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKVCVIS*DMFLEL
Trigger: TAGTTCCAGAAACATATCTCAAGATATGACACAGAC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGTACTTGTGCAAGGCTaGTTTCAGAGTTTAGGAACG +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSVLVQG*FQSLGT
Trigger: CGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTAC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAAAGGAGATGGAGAATaGGGGATAGGGAACACTGAA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSKGDGE*GIGNTE
Trigger: TTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATCATTGCTTTGTCTATaGATCCACAGGCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKSLLCL*IHRLKM
Trigger: CATTTTAAGCCTGTGGATTCATAGACAAAGCAATGA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp CTTTGTGTGAGCAACAACGCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAAGTTTGATAGCATTTaGGCTGAAGACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCVSNNAVYFTSLIAFELKFDSI*AEDISS
Trigger: GGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTT...CAGCTCAAATGCTATCAAACTTGTGAAATAAACAGCGTTGTTGCTCACACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGCAGGAAGAAGGGGTTaGAACAAAGCTGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSAGRRG*NKAVRF
Trigger: AAACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAGTGCACTTGTATCATaGCCAAACAACAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKSALVS*PNNNAF
Trigger: AAAAGCATTGTTGTTTGGCCATGATACAAGTGCACT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAACTTATAACTTTCTCGTaGAAGATGGACTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKLITFS*KMDSMF
Trigger: AAACATGGAGTCCATCTTCCACGAGAAAGTTATAAG...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429774.6
CDS-3UTR TCA 90 bp TCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGTAAGAAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: SSKVSYLKSLSLTFSIVRSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...TCTTACAATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAAGACATCTCTTCCTTTTTTATTCAGGCAATGTTaGGCACAAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AVYFTSLIAFELKTSLPFLFRQC*AQSEPS
Trigger: AGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAA...AAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR TCA 90 bp GCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAAGACATCTCTTCCTTTTCAAACAGGCTTTGTGTaGGCAACAACGCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: AVYFTSLIAFELKTSLPFQTGFV*ATTLFI
Trigger: AATAAACAGCGTTGTTGCTCACACAAAGCCTGTTTG...AAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATATGGTTACTTGCACTaGCATCTTTTCATACTGGCC +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSYGYLH*HLFILA
Trigger: GGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGTGGTTTACAGTAAATaGCAGTACCTGATGTATAAA +
Preference number: 4 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKVVYSK*QYLMYK
Trigger: TTTATACATCAGGTACTGCCATTTACTGTAAACCAC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGCCCGCCACCATACCTaGCTTAAGTTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSARHHT*LKFCIF
Trigger: AAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAAAGCCACTATTACATaGTGTGAGCCAACTTACCTA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCKATIT*CEPTYL
Trigger: TAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCACCAGATCACCATCTTTaGCAAGCTATACCTACTAAA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSPDHHL*QAIPTK
Trigger: TTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGG...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGCTGACATGATTAGTTaGTCCAATCTGGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSADMIS*SNLVVL
Trigger: AAGAACTACCAGATTGGATCAACTAATCATGTCAGC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTATGCAAGAGACAATTaGGAGCTTCCTAAATGCATC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCYARDN*ELPKCI
Trigger: GATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAGTATAGAGTTTACCTaGAGCAGCCTTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSSIEFT*SSLFKQ
Trigger: CTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAGTATAGAGTTTACCTaGAGCAGCCTTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCSIEFT*SSLFKQ
Trigger: CTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAACACAAGAAAACACTaGAGCACACGGTATACAGTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSNTRKH*STRYTV
Trigger: AACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAACACAAGAAAACACTaGAGCACACGGTATACAGTT +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCNTRKH*STRYTV
Trigger: AACTGTATACCGTGTGCTCCAGTGTTTTCTTGTGTT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAGTAAGATTTGTACCTaGTGTCTGTGTCATATCTTG +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCSKICT*CLCHIL
Trigger: CAAGATATGACACAGACATCAGGTACAAATCTTACT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGTAGCAGAAAAGTTGTaGTCAGAGAAAACAACACAA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCVAEKL*SEKTTQ
Trigger: TTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTAC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTGGTTTTCACCAAAATaGTACTATCCTATTGACCCA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCWFSPK*YYPIDP
Trigger: TGGGTCAATAGGATAGTATCATTTTGGTGAAAACCA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTCGAAGTTGTCAGCTaGAATTTCTTGGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSFEVVS*NFLDFS
Trigger: GCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTCGAAGTTGTCAGCTaGAATTTCTTGGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCFEVVS*NFLDFS
Trigger: GCTAAAATCCAAGAAATTTCAGCTGACAACTTCGAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTTACATTGCTGACATaGTTAGTTGATCCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSFTLLT*LVDPIW
Trigger: CCAGATTGGATCAACTAATCATGTCAGCAATGTAAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR TCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATCATTGCTTTGTCTATaGATCCACAGGCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSSLLCL*IHRLKM
Trigger: CATTTTAAGCCTGTGGATTCATAGACAAAGCAATGA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAACTGGTAGTTTTGTCTaGAATGATACTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSTGSFV*NDTQLV
Trigger: AACCAGTTGAGTATCATTGCAGACAAAACTACCAGT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR GCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTACTGGTAGTTTTGTCTaGAATGATACTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCTGSFV*NDTQLV
Trigger: AACCAGTTGAGTATCATTGCAGACAAAACTACCAGT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSRKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTAGAAAACAAACTATATaGAAAAAGCCTGAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCRKQTI*KKPEAR
Trigger: TCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCT...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAAGTGCACTTGTATCATaGCCAAACAACAATGCTTTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSSALVS*PNNNAF
Trigger: AAAAGCATTGTTGTTTGGCCATGATACAAGTGCACT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAATCATACATTCATGGTaGGTACGTATGTTTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSIIHSW*VRMFSL
Trigger: AAGACTAAACATACGTACCCACCATGAATGTATGAT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CCA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGTGGTTTACAGTAAATaGCAGTACCTGATGTATAAA +
Preference number: 4 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSVVYSK*QYLMYK
Trigger: TTTATACATCAGGTACTGCCATTTACTGTAAACCAC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS GCA 90 bp TGTGCCACAAGATGGCCTCATGCACCACTTATGGGGTCAGCTCTGTaGTGCCACAGACACTGGGGTGCCAGGAAGGCTACAGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: CATRWPHAPLMGSAL*CHRHWGARKATGQM
Trigger: CATCTGCCCTGTAGCCTTCCTGGCACCCCAGTGTCTGTGGCAGCACAGAGCTGACCCCATAAGTGGTGCATGAGGCCATCTTGTGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS GCA 90 bp CGTCTCTGCAGCAGCTTAGTGATGCTGTGCCACAAGATGGCCTCATaGACCACTTATGGGGTCAGCTCTGTGCTGCCACAGACACTGGGG +
Preference number: 5 (lower is better)
Translates to: RLCSSLVMLCHKMAS*TTYGVSSVLPQTLG
Trigger: CCCCAGTGTCTGTGGCAGCACAGAGCTGACCCCATAAGTGGTGCATGAGGCCATCTTGTGGCACAGCATCACTAAGCTGCTGCAGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS-3UTR CAA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGGACTCCATGTTTATTaGTCTGGAGCCAACGGCCCC +
Preference number: 5 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAAGLHVY*SGANGP
Trigger: GGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCC...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS GCA 90 bp TGCACCACTTATGGGGTCAGCTCTGTGCTGCCACAGACACTGGGGTaGCAGGAAGGCTACAGGGCAGATGCTCATGGACATCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: CTTYGVSSVLPQTLG*QEGYRADAHGHHKG
Trigger: ACCTTTGTGATGTCCATGAGCATCTGCCCTGTAGCCTTCCTGGCACCCCAGTGTCTGTGGCAGCACAGAGCTGACCCCATAAGTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS TCA 90 bp GGTCCCGATTTGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTCTaGGGACCCGAGGTCGTAGGTGGATCTCCTCACGGAGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GPDLKFMRCSLGWLV*GPEVVGGSPHGVRA
Trigger: TGCCCTCACTCCGTGAGGAGATCCACCTACGACCTCGGGTCCTCAGACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS-3UTR CAA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 5 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CAA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTCGCAGGAAGAAGGGGTaGCAACAAAGCTGTAAGGTT +
Preference number: 5 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAARRKKG*QQSCKV
Trigger: AACCTTACAGCTTTGTTGCAACCCCTTCTTCCTGCG...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS TCA 90 bp GAATCCGATTTGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTCTaGGGACCCGAGGTCGTAGGTGGATCTCCTCACGGAGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: ESDLKFMRCSLGWLV*GPEVVGGSPHGVRA
Trigger: TGCCCTCACTCCGTGAGGAGATCCACCTACGACCTCGGGTCCTCAGACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS TCA 90 bp AGATCCGATTTGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTCTaGGGACCCGAGGTCGTAGGTGGATCTCCTCACGGAGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RSDLKFMRCSLGWLV*GPEVVGGSPHGVRA
Trigger: TGCCCTCACTCCGTGAGGAGATCCACCTACGACCTCGGGTCCTCAGACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642896.1
CDS CCA 90 bp ACAACACCTCAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTaGGATCGAAGCTGCCCAGCTGAAATTCCAAACCTAGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: TTPQTEPVNLSGYRW*DRSCPAEIPNLGQW
Trigger: CCACTGTCCTAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS-3UTR CAA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp AACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: NSVLIGPPAAAAAAAVAAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: CELCPDRSPCCCCCCCCCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...GCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTCCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 5 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAAPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CAA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCCTGCTGTTGCTGCTTTaGCTGCTGTCTGAAACATTA +
Preference number: 5 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCLLLLL*LLSETL
Trigger: TAATGTTTCAGACAGCAGCAAAAGCAGCAACAGCAG...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617719.4
CDS GCA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAATAGAGAA +
Preference number: 5 (lower is better)
Translates to: SHGCELCPDRSPCCC*CCCCCCFCCCLNRE
Trigger: TTCTCTATTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556644.5
CDS GCA 90 bp CTTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAATAGA +
Preference number: 5 (lower is better)
Translates to: LSHGCELCPDRSPCC*CCCCCCCFCCCLNR
Trigger: TCTATTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556644.5
CDS GCA 90 bp ACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTaGCCAGCTGAAATTCCAAACCTAGGACAGTGGATAGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: TEPVNLSGYRWWDRS*PAEIPNLGQWIEQE
Trigger: TTCCTGTTCTATCCACTGTCCTAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS CCA 90 bp AACACAACACCTCAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTaGTGGGATCGAAGCTGCCCAGCTGAAATTCCAAACCTAGGACAG +
Preference number: 5 (lower is better)
Translates to: NTTPQTEPVNLSGYR*WDRSCPAEIPNLGQ
Trigger: CTGTCCTAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTGAGGTGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS-3UTR CAA 90 bp CACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: HMDVNSVLIGPPAAAAAAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS GCA 90 bp ATCACACAACCATATGAACGTCTCTGCAGCAGCTTAGTGATGCTGTaGCACAAGATGGCCTCATGCACCACTTATGGGGTCAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ITQPYERLCSSLVML*HKMASCTTYGVSSV
Trigger: CACAGAGCTGACCCCATAAGTGGTGCATGAGGCCATCTTGTGGCACAGCATCACTAAGCTGCTGCAGAGACGTTCATATGGTTGTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS GCA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAATAGAGAAAAA +
Preference number: 5 (lower is better)
Translates to: HGCELCPDRSPCCCC*CCCCCFCCCLNREK
Trigger: TTTTTCTCTATTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556644.5
CDS-3UTR CAA 90 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: ELCPDRSPCCCCCCCCCCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTGCAGTGGTGAGCCCTaGGCACTCTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSACSGEP*ALCNLC
Trigger: GCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: GCELCPDRSPCCCCCCCCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...ACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp CATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: HGCELCPDRSPCCCCCCCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp GTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: VNSVLIGPPAAAAAAAVACLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LCPDRSPCCCCCCCCCCFCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS GCA 90 bp CTTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATATATTTT +
Preference number: 5 (lower is better)
Translates to: LSHGCELCPDRSPCC*CCCCCCCFCCCIYF
Trigger: AAAATATATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545170.5
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTGGACTCCATGTTTATTaGTCTGGAGCCAACGGCCCC +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAGLHVY*SGANGP
Trigger: GGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCC...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp TCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: SHGCELCPDRSPCCCCCCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAACLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp ATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTGCTGCTTTCCCATCATTTTGTTaGCAAACCGCTAAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: MDVNSVLIGPPAAAAAAAFPSFC*QTAKSL
Trigger: AAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAA...AGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CAA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAGGACTCCATGTTTATTaGTCTGGAGCCAACGGCCCC +
Preference number: 5 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKGLHVY*SGANGP
Trigger: GGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCC...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLFFKVGFSSFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp TTCAGCACCAAATGTCACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: FSTKCHTRPCEETTKQALFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...CAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTGACATTTGGTGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CAA 90 bp TTTCACATGGATGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: FHMDVNSVLIGPPAAAAACLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCCATGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000359366.10
ENST00000553488.5
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556274.5
ENST00000556288.5
ENST00000556374.5
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000617719.4
CDS-3UTR CAA 90 bp CACACGCGTCCATGTGAAGAGACTACCAAACAGGCTTTGTGTGAGCAACAACGCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: HTRPCEETTKQALCEQQRCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GCGTTGTTGCTCACACAAAGCCTGTTTGGTAGTCTCTTCACATGGACGCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATGCAGTGGTGAGCCCTaGGCACTCTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSCSGEP*ALCNLC
Trigger: GCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTACTGCCACAGTGCACTaGTATCATGGCCAAACAACA +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSATATVH*YHGQTT
Trigger: TGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGT...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp CTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLLFFKVGFSCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...CGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp GCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: AAAAVAAFAAVFQSRLLVCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...GACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 5 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTAATGATACTATCCTATaGACCCAGCAAGAAACTCTC +
Preference number: 5 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSNDTIL*TQQETL
Trigger: GAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATT...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359366.10
CDS-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCACTGCCACAGTGCACTaGTATCATGGCCAAACAACA +
Preference number: 5 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSTATVH*YHGQTT
Trigger: TGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGT...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGGACTCCATGTTTATTaGTCTGGAGCCAACGGCCCC +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSGLHVY*SGANGP
Trigger: GGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GCTGTTTATTTCACAAGTTTGATAGCATTTGAGCTGAAGACATCTCTTCCTTTTGGACTCCATGTTTATTaGTCTGGAGCCAACGGCCCC +
Preference number: 5 (lower is better)
Translates to: AVYFTSLIAFELKTSLPFGLHVY*SGANGP
Trigger: GGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCC...AAAAGGAAGAGATGTCTTCAGCTCAAATGCTATCAAACTTGTGAAATAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647161.1
CDS-3UTR CAA 90 bp GCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: AAAVAAFAAVFQSRLLVSCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGAGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp CTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTTTTCAAAGTAGGCTTCTCGTCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLFFKVGFSSCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGACGAGAAGCCTACTTTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359366.10
ENST00000553570.5
ENST00000554350.5
ENST00000554994.5
ENST00000555816.5
ENST00000556288.5
ENST00000556315.6
ENST00000556671.5
ENST00000556898.5
ENST00000556958.5
ENST00000557030.6
ENST00000646485.1
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTTGTTCCTGACTTTCTaGCAGGTGGTTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSALFLTF*QVVYSK
Trigger: TTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCGGACTACTGGTAGTTTaGTCTGCAATGATACTCAAC +
Preference number: 5 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSGLLVV*SAMILN
Trigger: GTTGAGTATCATTGCAGACAAAACTACCAGTAGTCC...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp TCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGTAAGATTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: SSKVSYLKSLSLTFSIVRFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...TCTTACAATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSACLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp CAGCCACACACCAGGAGGGCAATATACCATATTATAATTTTCGAAGTTGTCAGCTTGTTCCTGACTTTCTaGCAGGTGGTTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: QPHTRRAIYHIIIFEVVSLFLTF*QVVYSK
Trigger: TTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAA...GCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACAACAAACTACACAAACACATTCAAACGCATCCAGTGTGTGCTCAGCTCTGCTCACCACTGTACATACTaGATCCCAGTAATACAAATT +
Preference number: 5 (lower is better)
Translates to: TTNYTNTFKRIQCVLSSAHHCTY*IPVIQI
Trigger: AATTTGTATTACTGGGATCAAGTATGTACAGTGGTG...AGCAGAGCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCCTACAACCGACGCATaGTTCCACTTTCCCATCATT +
Preference number: 5 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCPTTDA*FHFPII
Trigger: AATGATGGGAAAGTGGAACAATGCGTCGGTTGTAGG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTGCACACGGTATACAGTaGAAGGGAGAACTGTTCATC +
Preference number: 5 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCAHGIQ*KGELFI
Trigger: GATGAACAGTTCTCCCTTCAACTGTATACCGTGTGC...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAAAATGATACTATCCTATaGACCCAGCAAGAAACTCTC +
Preference number: 5 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKNDTIL*TQQETL
Trigger: GAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATT...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAACTGCCACAGTGCACTaGTATCATGGCCAAACAACA +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSTATVH*YHGQTT
Trigger: TGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGT...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTCCTGAGCCATCATTaGCTTCTAACACTCGTTCCA +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSFLSHH*LLTLVP
Trigger: TGGAACGAGTGTTAGAAGCAAATGATGGCTCAGGAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp AGAAAGAAAGAAAAAGAAAATAGCGGCCCAACGCCTCTTCGTTTCCGGATTAAATGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: RKKEKENSGPTPLRFRIKCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...TTTAATCCGGAAACGAAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp TCGTCTAAGGTAAGTTACTTAAAGTCTCTGAGCCTCACTTTCTCCATTGTAAGATGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: SSKVSYLKSLSLTFSIVRCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...TCTTACAATGGAGAAAGTGAGGCTCAGAGACTTTAAGTAACTTACCTTAGACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553488.5
ENST00000554673.5
ENST00000556671.5
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCAGGACTACTGGTAGTTTaGTCTGCAATGATACTCAAC +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSGLLVV*SAMILN
Trigger: GTTGAGTATCATTGCAGACAAAACTACCAGTAGTCC...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATTGTTCCTGACTTTCTaGCAGGTGGTTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSLFLTF*QVVYSK
Trigger: TTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTTGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCATGTCTGTGTCATATCTaGAGATATGTTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSCLCHI*RYVSGT
Trigger: AGTTCCAGAAACATATCTCAAGATATGACACAGACA...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359366.10
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp GTGCACTTGTATCATGGCCAAACAACAATGCTTTTTGTTTCAGATATTTTCTGTCACCACTGTACATACTaGATCCCAGTAATACAAATT +
Preference number: 5 (lower is better)
Translates to: VHLYHGQTTMLFVSDIFCHHCTY*IPVIQI
Trigger: AATTTGTATTACTGGGATCAAGTATGTACAGTGGTG...ACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS-3UTR CAA 90 bp ACTGTGACTTCCATTGTTCTTAAGCTATCTAAACATGATGCAAGTGTCAAATCACACCACTGTACATACTaGATCCCAGTAATACAAATT +
Preference number: 5 (lower is better)
Translates to: TVTSIVLKLSKHDASVKSHHCTY*IPVIQI
Trigger: AATTTGTATTACTGGGATCAAGTATGTACAGTGGTG...TGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393287.9
ENST00000429774.6
ENST00000545170.5
ENST00000644486.2
CDS GCA 72 bp AGATGGCCTCATGCACCACTTATGGGGTCAGCTCTGTaGTGCCACAGACACTGGGGTGCCAGGAAGGCTACA +
Preference number: 6 (lower is better)
Translates to: RWPHAPLMGSAL*CHRHWGARKAT
Trigger: TGTAGCCTTCCTGGCACCCCAGTGTCTGTGGCAGCACAGAGCTGACCCCATAAGTGGTGCATGAGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS GCA 72 bp AGCAGCTTAGTGATGCTGTGCCACAAGATGGCCTCATaGACCACTTATGGGGTCAGCTCTGTGCTGCCACAG +
Preference number: 6 (lower is better)
Translates to: SSLVMLCHKMAS*TTYGVSSVLPQ
Trigger: CTGTGGCAGCACAGAGCTGACCCCATAAGTGGTGCATGAGGCCATCTTGTGGCACAGCATCACTAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCLF
Trigger: AAACAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556339.5
CDS GCA 72 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTCTGAATAGA +
Preference number: 6 (lower is better)
Translates to: LCPDRSPCCCCC*CCCCFCCCLNR
Trigger: TCTATTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556644.5
CDS GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTCTGAAT +
Preference number: 6 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCLN
Trigger: ATTCAGACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556644.5
CDS GCA 72 bp GTGAACTCTGTCCTGATAGGCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: VNSVLIGPCCCC*CCCCCFCCCCL
Trigger: AAGACAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGCCTATCAGGACAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620536.4
CDS GCA 72 bp GATGTGAACTCTGTCCTGATAGGCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: DVNSVLIGPCCC*CCCCCCFCCCC
Trigger: ACAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGCCTATCAGGACAGAGTTCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620536.4
CDS GCA 72 bp ATGGATGTGAACTCTGTCCTGATAGGCCCCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGCTTTTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: MDVNSVLIGPCC*CCCCCCCFCCC
Trigger: ACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGCCTATCAGGACAGAGTTCACATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620536.4
CDS GCA 72 bp TGTGAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGCTTTTGCTGCTGTATA +
Preference number: 6 (lower is better)
Translates to: CELCPDRSPCCC*CCCCCCFCCCI
Trigger: TATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545170.5
CDS CCA 72 bp GGGAGTGGCTGCCGGGTTGGACAGTCCGATTTCCAGTaGGGTCCCGATTTGAAATTCATGAGATGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GSGCRVGQSDFQ*GPDLKFMRCSL
Trigger: CAAGGAACATCTCATGAATTTCAAATCGGGACCCCACTGGAAATCGGACTGTCCAACCCGGCAGCCACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS TCA 72 bp CAGTGGCTACAGGTGGTGGGATCGAAGCTGCCCAGCTaGAATTCCAAACCTAGGACAGTGGATAGAACAGGA +
Preference number: 6 (lower is better)
Translates to: QWLQVVGSKLPS*NSKPRTVDRTG
Trigger: TCCTGTTCTATCCACTGTCCTAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS TCA 72 bp TTGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTCTaGGGACCCGAGGTCGTAGGTGGATCTCCTCACGGA +
Preference number: 6 (lower is better)
Translates to: LKFMRCSLGWLV*GPEVVGGSPHG
Trigger: TCCGTGAGGAGATCCACCTACGACCTCGGGTCCTCAGACCAACCAGCCCAAGGAACATCTCATGAATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564606.6
ENST00000568290.1
ENST00000642417.1
ENST00000642896.1
CDS GCA 72 bp CCATATGAACGTCTCTGCAGCAGCTTAGTGATGCTGTaGCACAAGATGGCCTCATGCACCACTTATGGGGTC +
Preference number: 6 (lower is better)
Translates to: PYERLCSSLVML*HKMASCTTYGV
Trigger: GACCCCATAAGTGGTGCATGAGGCCATCTTGTGGCACAGCATCACTAAGCTGCTGCAGAGACGTTCATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507965.5
CDS GCA 72 bp GAACTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGCTTTTGCTGCTGTATATAT +
Preference number: 6 (lower is better)
Translates to: ELCPDRSPCCCC*CCCCCFCCCIY
Trigger: ATATATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545170.5
CDS GCA 72 bp GTGAACCTCAGTGGCTACAGGTGGTGGGATCGAAGCTaGCCAGCTGAAATTCCAAACCTAGGACAGTGGATA +
Preference number: 6 (lower is better)
Translates to: VNLSGYRWWDRS*PAEIPNLGQWI
Trigger: TATCCACTGTCCTAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS CCA 72 bp CAAACAGAGCCTGTGAACCTCAGTGGCTACAGGTGGTaGGATCGAAGCTGCCCAGCTGAAATTCCAAACCTA +
Preference number: 6 (lower is better)
Translates to: QTEPVNLSGYRW*DRSCPAEIPNL
Trigger: TAGGTTTGGAATTTCAGCTGGGCAGCTTCGATCCCACCACCTGTAGCCACTGAGGTTCACAGGCTCTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS CCA 72 bp CCAGGAGGAAGAAGAGAGATTAGGCTGGTTGTCCGATaGGCACAGCTTTATTCTGGAACGGTGAACCCAGTG +
Preference number: 6 (lower is better)
Translates to: PGGRREIRLVVR*AQLYSGTVNPV
Trigger: CACTGGGTTCACCGTTCCAGAATAAAGCTGTGCCCATCGGACAACCAGCCTAATCTCTCTTCTTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS CAA 72 bp CCCCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTTaGCTGCTGTATATATTTTTGGAGACGGAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: PLLLLLLLLLLL*LLYIFLETESH
Trigger: GTGAGACTCCGTCTCCAAAAATATATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545170.5
CDS CAA 72 bp CGGGTTGGACAGTCCGATTTCCAGTGGGGTCCCGATTaGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTC +
Preference number: 6 (lower is better)
Translates to: RVGQSDFQWGPD*KFMRCSLGWLV
Trigger: GACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGGACCCCACTGGAAATCGGACTGTCCAACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS GCA 72 bp CTCTGTCCTGATAGGTCCCCCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGCTTTTGCTGCTGTATATATTTT +
Preference number: 6 (lower is better)
Translates to: LCPDRSPCCCCC*CCCCFCCCIYF
Trigger: AAAATATATACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545170.5
CDS CCA 72 bp ACTTGTGACTTCCAGGAGGAAGAAGAGAGATTAGGCTaGTTGTCCGATGGGCACAGCTTTATTCTGGAACGG +
Preference number: 6 (lower is better)
Translates to: TCDFQEEEERLG*LSDGHSFILER
Trigger: CCGTTCCAGAATAAAGCTGTGCCCATCGGACAACCAGCCTAATCTCTCTTCTTCCTCCTGGAAGTCACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS GCA 72 bp CTGTTGCTGCTTTTGCTGCTGTTGTCTTTCGTAATCTaGCTGCCTCGGCTTTTCAAAGTAGGCTTCTCGTCT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLSFVI*LPRLFKVGFSS
Trigger: AGACGAGAAGCCTACTTTGAAAAGCCGAGGCAGGCAGATTACGAAAGACAACAGCAGCAAAAGCAGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620536.4
CDS TCA 72 bp GAGAGTGACTTTAAGGGAAGTAGTGGGGAGTACTTGTaGCTTCCAGGAGGAAGAAGAGAGATTAGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: ESDFKGSSGEYL*LPGGRREIRLV
Trigger: AACCAGCCTAATCTCTCTTCTTCCTCCTGGAAGTCACAAGTACTCCCCACTACTTCCCTTAAAGTCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642417.1
CDS CAA 72 bp CCAGCTAGGGTGTCTTCATATAGTTGGGAATCCGATTaGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTC +
Preference number: 6 (lower is better)
Translates to: PARVSSYSWESD*KFMRCSLGWLV
Trigger: GACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGATTCCCAACTATATGAAGACACCCTAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1
CDS CAA 72 bp CATCAGTCTTCAGCTGCTAAGCTGAGAAGATCCGATTaGAAATTCATGAGATGTTCCTTGGGCTGGTTGGTC +
Preference number: 6 (lower is better)
Translates to: HQSSAAKLRRSD*KFMRCSLGWLV
Trigger: GACCAACCAGCCCAAGGAACATCTCATGAATTTCAAATCGGATCTTCTCAGCTTAGCAGCTGAAGACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642896.1
CDS CCA 72 bp AGAACTGATCGTCCAGCTAGGGTGTCTTCATATAGTTaGGAATCCGATTTGAAATTCATGAGATGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: RTDRPARVSSYS*ESDLKFMRCSL
Trigger: CAAGGAACATCTCATGAATTTCAAATCGGATTCCCAACTATATGAAGACACCCTAGCTGGACGATCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568290.1